Pregenerated sensors for DPM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026810Ensembl transcript IDs: ENSMUST00000028151.7, ENSMUST00000140592.8
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCCTTGTGACGGGACAGGACTTGTACAGAGAGGCGGGAAGGCCTaGTCAATCCATCAGCACAGTGGGAGGAGCACAGAGGTGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: LPCDGTGLVQRGGKA*SIHQHSGRSTEVRG Trigger: TCCTCTCACCTCTGTGCTCCTCCCACTGTGCTGATGGATTGAGCAGGCCTTCCCGCCTCTCTGTACAAGTCCTGTCCCGTCACAAGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR TCA 90 bp | TCCTCATGGAGCCTGGGAAGTGTCAGACTCGGAAGAGCTGCCTTGTaGCGGGACAGGACTTGTACAGAGAGGCGGGAAGGCCTGCTCAAT | + |
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Preference number: 1 (lower is better) Translates to: SSWSLGSVRLGRAAL*RDRTCTERREGLLN Trigger: ATTGAGCAGGCCTTCCCGCCTCTCTGTACAAGTCCTGTCCCGTCACAAGGCAGCTCTTCCGAGTCTGACACTTCCCAGGCTCCATGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR TCA 90 bp | CCACAGAGCCGTAAGAGATGCCAGGGTGACTTGAGGCAGGAACATTaGAGAGATGAAGATGAAGCTGAGACAGGAAAGAAAGGGGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: PQSRKRCQGDLRQEH*RDEDEAETGKKGEP Trigger: TGGCTCCCCTTTCTTTCCTGTCTCAGCTTCATCTTCATCTCTTCAATGTTCCTGCCTCAAGTCACCCTGGCATCTCTTACGGCTCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140592.8 |
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| 3UTR CCA 90 bp | CATTTATTTGTAAGTTTTCCCAAACAGGCCAATTGTGGTCTAGTGTaGCTGCCTGGATGTAACCCTGTGGTTCTGGGGTTTGTCAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: HLFVSFPKQANCGLV*LPGCNPVVLGFVSL Trigger: AAGACTGACAAACCCCAGAACCACAGGGTTACATCCAGGCAGCCACACTAGACCACAATTGGCCTGTTTGGGAAAACTTACAAATAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGTTTGTCAGTCTTTCCCCAGGGCTTCCTGGGTCCAGAAGTCCTCATGGAGCAATCCATCAGCACAGTaGGAGGAGCACAGAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: GVCQSFPRASWVQKSSWSNPSAQ*EEHRGE Trigger: CTCACCTCTGTGCTCCTCCCACTGTGCTGATGGATT...GCTCCATGAGGACTTCTGGACCCAGGAAGCCCTGGGGAAAGACTGACAAACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCCCCAGGGCTTCCTGGGTCCAGAAGTCCTCATGGAGCCTGGGAAGTGTCCCATCTTGTAAGCTGTaGCCCTTGGTCCCTTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SFPRASWVQKSSWSLGSVPSCKL*PLVPFL Trigger: CAGAAAAGGGACCAAGGGTCACAGCTTACAAGATGG...GACACTTCCCAGGCTCCATGAGGACTTCTGGACCCAGGAAGCCCTGGGGAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCTGGGGTTTGTCAGTCTTTCCCCAGGGCTTCCTGGGTCCAGAAGTCCTCATGGAAGAGCTGCCTTGTaGCGGGACAGGACTTGTACA | + |
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Preference number: 2 (lower is better) Translates to: VLGFVSLSPGLPGSRSPHGRAAL*RDRTCT Trigger: TGTACAAGTCCTGTCCCGTCACAAGGCAGCTCTTCC...ATGAGGACTTCTGGACCCAGGAAGCCCTGGGGAAAGACTGACAAACCCCAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR GCA 90 bp | AGAACTCGGTGGAAGGGACAGGGAGCTTTGACTGTGAGATGGACAGGACCAACCCAAAGAGGGCTGCAGTaGAGCCAGCTTGACCATCTT | + |
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Preference number: 2 (lower is better) Translates to: RTRWKGQGALTVRWTGPTQRGLQ*SQLDHL Trigger: AAGATGGTCAAGCTGGCTGCACTGCAGCCCTCTTTG...GGTTGGTCCTGTCCATCTCACAGTCAAAGCTCCCTGTCCCTTCCACCGAGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTCTTTCCCCAGGGCTTCCTGGGTCCAGAAGTCCTCATGGAGCCTGGGAAAATTGTGGTCTAGTGTaGCTGCCTGGATGTAACCCT | + |
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Preference number: 2 (lower is better) Translates to: VSLSPGLPGSRSPHGAWENCGLV*LPGCNP Trigger: AGGGTTACATCCAGGCAGCCACACTAGACCACAATT...TTCCCAGGCTCCATGAGGACTTCTGGACCCAGGAAGCCCTGGGGAAAGACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR CCA 90 bp | GCTAACCACCTGTGCATCATCCGGCCATGTGGTTCCTCAGTCAACCCAAGCACTCCTTGGTCCCTTTTCTaGAGGAGATATGGAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: ANHLCIIRPCGSSVNPSTPWSLF*RRYGEG Trigger: GCCTTCTCCATATCTCCTCCAGAAAAGGGACCAAGG...AGTGCTTGGGTTGACTGAGGAACCACATGGCCGGATGATGCACAGGTGGTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140592.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGTCTAGTGTGGCTGCCTGGATGTAACCCTGTGGTTCTGGGGTTTGTCAGTGTCCAGAAGTCCTCATaGAGCCTGGGAAGTGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: CGLVWLPGCNPVVLGFVSVQKSS*SLGSVR Trigger: TCTGACACTTCCCAGGCTCCATGAGGACTTCTGGAC...ACTGACAAACCCCAGAACCACAGGGTTACATCCAGGCAGCCACACTAGACCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGCAATGTTCAGCCTCTGAGCCTAAGGGAAGTGAGAGGCTTCCCAACCCACCTGGATGTAACCCTGTaGTTCTGGGGTTTGTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: TSNVQPLSLREVRGFPTHLDVTL*FWGLSV Trigger: GACTGACAAACCCCAGAACCACAGGGTTACATCCAG...GTGGGTTGGGAAGCCTCTCACTTCCCTTAGGCTCAGAGGCTGAACATTGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR TCA 90 bp | AGCGTAACAGCAAAGACACAGTTCCCAACCCACAGAGCCGTAAGAGATGCCAGGCCATCTTGTAAGCTGTaGCCCTTGGTCCCTTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SVTAKTQFPTHRAVRDARPSCKL*PLVPFL Trigger: CAGAAAAGGGACCAAGGGTCACAGCTTACAAGATGG...CCTGGCATCTCTTACGGCTCTGTGGGTTGGGAACTGTGTCTTTGCTGTTACGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140592.8 |
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| 3UTR-3UTR TCA 90 bp | AGAACTCGGTGGAAGGGACAGGGAGCTTTGACTGTGAGATGGACAGGACCAACCTCCAGGTTGTCAAACTaGGAAGAAAACAGCCCCATG | + |
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Preference number: 2 (lower is better) Translates to: RTRWKGQGALTVRWTGPTSRLSN*EENSPM Trigger: CATGGGGCTGTTTTCTTCTCAGTTTGACAACCTGGA...GGTTGGTCCTGTCCATCTCACAGTCAAAGCTCCCTGTCCCTTCCACCGAGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR TCA 90 bp | AACTCGGTGGAAGGGACAGGGAGCTTTGACTGTGAGATGGACAGGACCAACCAGTCCAGGTTGTCAAACTaGGAAGAAAACAGCCCCATG | + |
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Preference number: 2 (lower is better) Translates to: NSVEGTGSFDCEMDRTNQSRLSN*EENSPM Trigger: CATGGGGCTGTTTTCTTCTCAGTTTGACAACCTGGA...CTGGTTGGTCCTGTCCATCTCACAGTCAAAGCTCCCTGTCCCTTCCACCGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGGTCTAGTGTGGCTGCCTGGATGTAACCCTGTGGTTCTGGGGTTTGTCAGTTGGCTTCTAAAAGGATaGCCAAGAGAGAGAGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: CGLVWLPGCNPVVLGFVSWLLKG*PRERGL Trigger: GAGCCCTCTCTCTCTTGGTCATCCTTTTAGAAGCCA...ACTGACAAACCCCAGAACCACAGGGTTACATCCAGGCAGCCACACTAGACCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGGACAGGGAGCTTTGACTGTGAGATGGACAGGACCAACCAGCAATGTTCAGCAAAGAGGGCTGCAGTaGAGCCAGCTTGACCATCTT | + |
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Preference number: 2 (lower is better) Translates to: KGQGALTVRWTGPTSNVQQRGLQ*SQLDHL Trigger: AAGATGGTCAAGCTGGCTGCACTGCAGCCCTCTTTG...CTGAACATTGCTGGTTGGTCCTGTCCATCTCACAGTCAAAGCTCCCTGTCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGGTCTAGTGTGGCTGCCTGGATGTAACCCTGTGGTTCTGGGGTTTGTCAGTTTGAGGCAGGAACATTaGAGAGATGAAGATGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: CGLVWLPGCNPVVLGFVSLRQEH*RDEDEA Trigger: AGCTTCATCTTCATCTCTTCAATGTTCCTGCCTCAA...ACTGACAAACCCCAGAACCACAGGGTTACATCCAGGCAGCCACACTAGACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140592.8 |
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| 3UTR-3UTR CCA 90 bp | TTATTTGTAAGTTTTCCCAAACAGGCCAATTGTGGTCTAGTGTGGCTGCCTGGAGTCCAGAAGTCCTCATaGAGCCTGGGAAGTGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: LFVSFPKQANCGLVWLPGVQKSS*SLGSVR Trigger: TCTGACACTTCCCAGGCTCCATGAGGACTTCTGGAC...TCCAGGCAGCCACACTAGACCACAATTGGCCTGTTTGGGAAAACTTACAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTTTCCCAAACAGGCCAATTGTGGTCTAGTGTGGCTGCCTGGATGTAACCCTTTCACTGAGCCTTCTTaGTTATCTTCTGGCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: SFPKQANCGLVWLPGCNPFTEPS*LSSGSS Trigger: TGAAGAGCCAGAAGATAACCAAGAAGGCTCAGTGAA...AGGGTTACATCCAGGCAGCCACACTAGACCACAATTGGCCTGTTTGGGAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140592.8 |
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| 3UTR-3UTR CCA 90 bp | ACATTTATTTGTAAGTTTTCCCAAACAGGCCAATTGTGGTCTAGTGTGGCTGCCCCTTGGTCCCTTTTCTaGAGGAGATATGGAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: TFICKFSQTGQLWSSVAAPWSLF*RRYGEG Trigger: GCCTTCTCCATATCTCCTCCAGAAAAGGGACCAAGG...GGCAGCCACACTAGACCACAATTGGCCTGTTTGGGAAAACTTACAAATAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR TCA 72 bp | AGCCTGGGAAGTGTCAGACTCGGAAGAGCTGCCTTGTaGCGGGACAGGACTTGTACAGAGAGGCGGGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: SLGSVRLGRAAL*RDRTCTERREG Trigger: GCCTTCCCGCCTCTCTGTACAAGTCCTGTCCCGTCACAAGGCAGCTCTTCCGAGTCTGACACTTCCCAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR CCA 72 bp | CCAGGGCTTCCTGGGTCCAGAAGTCCTCATGGAGCCTaGGAAGTGTCAGACTCGGAAGAGCTGCCTTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: PGLPGSRSPHGA*EVSDSEELPCD Trigger: GTCACAAGGCAGCTCTTCCGAGTCTGACACTTCCCAGGCTCCATGAGGACTTCTGGACCCAGGAAGCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR CCA 72 bp | TCTTTCCCCAGGGCTTCCTGGGTCCAGAAGTCCTCATaGAGCCTGGGAAGTGTCAGACTCGGAAGAGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: SFPRASWVQKSS*SLGSVRLGRAA Trigger: GGCAGCTCTTCCGAGTCTGACACTTCCCAGGCTCCATGAGGACTTCTGGACCCAGGAAGCCCTGGGGAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR CAA 90 bp | GTTCTGGGGTTTGTCAGTCTTTCCCCAGGGCTTCCTGGGTCCAGAAGTCCTCATGAGGGACTGGGAGGATaGGAGTGGAAGCTAGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: VLGFVSLSPGLPGSRSPHEGLGG*EWKLGG Trigger: GCCACCTAGCTTCCACTCCAATCCTCCCAGTCCCTC...ATGAGGACTTCTGGACCCAGGAAGCCCTGGGGAAAGACTGACAAACCCCAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140592.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCTAACCACCTGTGCATCATCCGGCCATGTGGTTCCTCAGTCAACCCAAGCAGGAGCCATGTCCTCATaGCCCCAGGAACCTGAAAAC | + |
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Preference number: 3 (lower is better) Translates to: RLTTCASSGHVVPQSTQAGAMSS*PQEPEN Trigger: GTTTTCAGGTTCCTGGGGCAATGAGGACATGGCTCC...TGCTTGGGTTGACTGAGGAACCACATGGCCGGATGATGCACAGGTGGTTAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140592.8 |
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| 3UTR-3UTR CAA 90 bp | ACCAGCAATGTTCAGCCTCTGAGCCTAAGGGAAGTGAGAGGCTTCCCAACCCACAAGGGACAGGGAGCTTaGACTGTGAGATGGACAGGA | + |
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Preference number: 3 (lower is better) Translates to: TSNVQPLSLREVRGFPTHKGQGA*TVRWTG Trigger: TCCTGTCCATCTCACAGTCAAAGCTCCCTGTCCCTT...GTGGGTTGGGAAGCCTCTCACTTCCCTTAGGCTCAGAGGCTGAACATTGCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR TCA 72 bp | AAGGCCCCTACAGCCTCATCCCTGCTGGACCTTCACTaGGCCTTCTTGGTTATCTTCTGGCTCTTCAGCATC | + |
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Preference number: 3 (lower is better) Translates to: KAPTASSLLDLH*AFLVIFWLFSI Trigger: GATGCTGAAGAGCCAGAAGATAACCAAGAAGGCTCAGTGAAGGTCCAGCAGGGATGAGGCTGTAGGGGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140592.8 |
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| 3UTR GCA 72 bp | GAAGAAAACAGCCCCATGTCCCAAAGAGGGCTGCAGTaGAGCCAGCTTGACCATCTTGTAAGCTGTGACCCT | + |
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Preference number: 3 (lower is better) Translates to: EENSPMSQRGLQ*SQLDHLVSCDP Trigger: AGGGTCACAGCTTACAAGATGGTCAAGCTGGCTGCACTGCAGCCCTCTTTGGGACATGGGGCTGTTTTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR CCA 72 bp | TGCAGCCAGCTTGACCATCTTGTAAGCTGTGACCCTTaGTCCCTTTTCTGGAGGAGATATGGAGAAGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: CSQLDHLVSCDP*SLFWRRYGEGP Trigger: GGGGCCTTCTCCATATCTCCTCCAGAAAAGGGACCAAGGGTCACAGCTTACAAGATGGTCAAGCTGGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR CCA 72 bp | GAGATATGGAGAAGGCCCCTACAGCCTCATCCCTGCTaGACCTTCACTGAGCCTTCTTGGTTATCTTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: EIWRRPLQPHPC*TFTEPSWLSSG Trigger: GCCAGAAGATAACCAAGAAGGCTCAGTGAAGGTCCAGCAGGGATGAGGCTGTAGGGGCCTTCTCCATATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140592.8 |
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| 3UTR TCA 72 bp | GATGACCAAGAGAGAGAGGGCTCCAGGTTGTCAAACTaGGAAGAAAACAGCCCCATGTCCCAAAGAGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: DDQEREGSRLSN*EENSPMSQRGL Trigger: CAGCCCTCTTTGGGACATGGGGCTGTTTTCTTCTCAGTTTGACAACCTGGAGCCCTCTCTCTCTTGGTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR GCA 72 bp | GAGGAGATATGGAGAAGGCCCCTACAGCCTCATCCCTaGTGGACCTTCACTGAGCCTTCTTGGTTATCTTCT | + |
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Preference number: 3 (lower is better) Translates to: EEIWRRPLQPHP*WTFTEPSWLSS Trigger: AGAAGATAACCAAGAAGGCTCAGTGAAGGTCCAGCAGGGATGAGGCTGTAGGGGCCTTCTCCATATCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140592.8 |
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| 3UTR CCA 72 bp | GACCATCTTGTAAGCTGTGACCCTTGGTCCCTTTTCTaGAGGAGATATGGAGAAGGCCCCTACAGCCTCATC | + |
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Preference number: 3 (lower is better) Translates to: DHLVSCDPWSLF*RRYGEGPYSLI Trigger: GATGAGGCTGTAGGGGCCTTCTCCATATCTCCTCCAGAAAAGGGACCAAGGGTCACAGCTTACAAGATGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR-3UTR CAA 90 bp | GACTGTGAGATGGACAGGACCAACCAGCAATGTTCAGCCTCTGAGCCTAAGGGACAACCCACCTTTCTCTaGGCTTCTAAAAGGATGACC | + |
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Preference number: 3 (lower is better) Translates to: DCEMDRTNQQCSASEPKGQPTFL*ASKRMT Trigger: GGTCATCCTTTTAGAAGCCAAGAGAAAGGTGGGTTG...TCCCTTAGGCTCAGAGGCTGAACATTGCTGGTTGGTCCTGTCCATCTCACAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR CCA 72 bp | GTAAGTTTTCCCAAACAGGCCAATTGTGGTCTAGTGTaGCTGCCTGGATGTAACCCTGTGGTTCTGGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: VSFPKQANCGLV*LPGCNPVVLGF Trigger: AAACCCCAGAACCACAGGGTTACATCCAGGCAGCCACACTAGACCACAATTGGCCTGTTTGGGAAAACTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| CDS-3UTR GCA 90 bp | ATGGACAGGACCAACCAGCAATGTTCAGCCTCTGAGCCTAAGGGAAGTGAGAGGGAGCAGCAGGAGGCCTaGGGCCAACGGGAGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: MDRTNQQCSASEPKGSEREQQEA*GQREED Trigger: GTCCTCCTCCCGTTGGCCGCAGGCCTCCTGCTGCTC...CCTCTCACTTCCCTTAGGCTCAGAGGCTGAACATTGCTGGTTGGTCCTGTCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| CDS-3UTR GCA 90 bp | GACTGTGAGATGGACAGGACCAACCAGCAATGTTCAGCCTCTGAGCCTAAGGGAGAGCAGCAGGAGGCCTaGGGCCAACGGGAGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: DCEMDRTNQQCSASEPKGEQQEA*GQREED Trigger: GTCCTCCTCCCGTTGGCCGCAGGCCTCCTGCTGCTC...TCCCTTAGGCTCAGAGGCTGAACATTGCTGGTTGGTCCTGTCCATCTCACAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| 3UTR CAA 72 bp | TGTGGCTGCCTGGATGTAACCCTGTGGTTCTGGGGTTaGTCAGTCTTTCCCCAGGGCTTCCTGGGTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: CGCLDVTLWFWG*SVFPQGFLGPE Trigger: TTCTGGACCCAGGAAGCCCTGGGGAAAGACTGACAAACCCCAGAACCACAGGGTTACATCCAGGCAGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| CDS-3UTR GCA 90 bp | GTGACCCTTGGTCCCTTTTCTGGAGGAGATATGGAGAAGGCCCCTACAGCCTCACAGATGTACAGCAGGTaGCAGCATGTGGAAGCACGC | + |
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Preference number: 4 (lower is better) Translates to: VTLGPFSGGDMEKAPTASQMYSR*QHVEAR Trigger: GCGTGCTTCCACATGCTGGCACCTGCTGTACATCTG...TGAGGCTGTAGGGGCCTTCTCCATATCTCCTCCAGAAAAGGGACCAAGGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140592.8 |
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| CDS-3UTR CCA 90 bp | GTCTTTCCCCAGGGCTTCCTGGGTCCAGAAGTCCTCATGGAGCCTGGGAAGTGTGGCAGGAAGTATTTGTaGATGACATGCTGGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: VFPQGFLGPEVLMEPGKCGRKYL*MTCWLS Trigger: TGACAGCCAGCATGTCATCCACAAATACTTCCTGCC...ACACTTCCCAGGCTCCATGAGGACTTCTGGACCCAGGAAGCCCTGGGGAAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| CDS-3UTR GCA 90 bp | GGGGTTTGTCAGTCTTTCCCCAGGGCTTCCTGGGTCCAGAAGTCCTCATGGAGCTATTTGTGGATGACATaGTGGCTGTCAATGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: GVCQSFPRASWVQKSSWSYLWMT*WLSMNG Trigger: GCCATTCATTGACAGCCAGCATGTCATCCACAAATA...GCTCCATGAGGACTTCTGGACCCAGGAAGCCCTGGGGAAAGACTGACAAACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| CDS-3UTR GCA 90 bp | GACTGTGAGATGGACAGGACCAACCAGCAATGTTCAGCCTCTGAGCCTAAGGGATATTTGTGGATGACATaGTGGCTGTCAATGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: DCEMDRTNQQCSASEPKGYLWMT*WLSMNG Trigger: GCCATTCATTGACAGCCAGCATGTCATCCACAAATA...TCCCTTAGGCTCAGAGGCTGAACATTGCTGGTTGGTCCTGTCCATCTCACAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| CDS-3UTR CCA 90 bp | TTGGCTTCTAAAAGGATGACCAAGAGAGAGAGGGCTCCAGGTTGTCAAACTGAGGGCAGGAAGTATTTGTaGATGACATGCTGGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: LASKRMTKRERAPGCQTEGRKYL*MTCWLS Trigger: TGACAGCCAGCATGTCATCCACAAATACTTCCTGCC...CTCAGTTTGACAACCTGGAGCCCTCTCTCTCTTGGTCATCCTTTTAGAAGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| CDS GCA 90 bp | ACAGCAGGTGCCAGCATGTGGAAGCACGCTGCCTTCCAGACACCCTaGCCCAGATCGGGAGACTTACCCACAAATAGGAGCAGCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: TAGASMWKHAAFQTP*PRSGDLPTNRSSRR Trigger: CCTCCTGCTGCTCCTATTTGTGGGTAAGTCTCCCGATCTGGGGCAGGGTGTCTGGAAGGCAGCGTGCTTCCACATGCTGGCACCTGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140592.8 |
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| CDS-3UTR CAA 90 bp | GTCAGTCTTTCCCCAGGGCTTCCTGGGTCCAGAAGTCCTCATGGAGCCTGGGAACGGGGCAGGAAGTATTaGTGGATGACATGCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: VSLSPGLPGSRSPHGAWERGRKY*WMTCWL Trigger: CAGCCAGCATGTCATCCACAAATACTTCCTGCCCCG...TTCCCAGGCTCCATGAGGACTTCTGGACCCAGGAAGCCCTGGGGAAAGACTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| CDS-3UTR CAA 90 bp | GTTCTGGGGTTTGTCAGTCTTTCCCCAGGGCTTCCTGGGTCCAGAAGTCCTCATGCCAAATCCTACTGCTaGGTCTGTCCCGGTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: VLGFVSLSPGLPGSRSPHAKSYC*VCPGGH Trigger: ATGGCCACCGGGACAGACCAAGCAGTAGGATTTGGC...ATGAGGACTTCTGGACCCAGGAAGCCCTGGGGAAAGACTGACAAACCCCAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| CDS-3UTR CAA 90 bp | GACTGTGAGATGGACAGGACCAACCAGCAATGTTCAGCCTCTGAGCCTAAGGGAGCCAAATCCTACTGCTaGGTCTGTCCCGGTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: DCEMDRTNQQCSASEPKGAKSYC*VCPGGH Trigger: ATGGCCACCGGGACAGACCAAGCAGTAGGATTTGGC...TCCCTTAGGCTCAGAGGCTGAACATTGCTGGTTGGTCCTGTCCATCTCACAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| CDS-3UTR CAA 90 bp | ACAGGACCAACCAGCAATGTTCAGCCTCTGAGCCTAAGGGAAGTGAGAGGCTTCCGGGGCAGGAAGTATTaGTGGATGACATGCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: TGPTSNVQPLSLREVRGFRGRKY*WMTCWL Trigger: CAGCCAGCATGTCATCCACAAATACTTCCTGCCCCG...GAAGCCTCTCACTTCCCTTAGGCTCAGAGGCTGAACATTGCTGGTTGGTCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028151.7 ENSMUST00000140592.8 |
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| CDS GCA 72 bp | GCCAGCATGTGGAAGCACGCTGCCTTCCAGACACCCTaGCCCAGATCGGGAGACTTACCCACAAATAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ASMWKHAAFQTP*PRSGDLPTNRS Trigger: GCTCCTATTTGTGGGTAAGTCTCCCGATCTGGGGCAGGGTGTCTGGAAGGCAGCGTGCTTCCACATGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140592.8 |
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| CDS CCA 72 bp | GAGAGTCTAAGCAGATGTACAGCAGGTGCCAGCATGTaGAAGCACGCTGCCTTCCAGACACCCTGCCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: ESLSRCTAGASM*KHAAFQTPCPR Trigger: TCTGGGGCAGGGTGTCTGGAAGGCAGCGTGCTTCCACATGCTGGCACCTGCTGTACATCTGCTTAGACTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140592.8 |
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