Pregenerated sensors for DPM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078919Ensembl transcript IDs: ENSMUST00000099072.11, ENSMUST00000109193.8, ENSMUST00000154111.8
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGCACAGGTCTGCTCTGACGGACCAGGCTATGCTCAGTCTGCATaGAGGGAGCACATGCAGGGAGCACTGCTTCATCTAGGTTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: SAQVCSDGPGYAQSA*REHMQGALLHLGSD Trigger: GTCTGAACCTAGATGAAGCAGTGCTCCCTGCATGTGCTCCCTGCATGCAGACTGAGCATAGCCTGGTCCGTCAGAGCAGACCTGTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR CCA 90 bp | GCGACAAGTTTTGGCAAAGGGGAACACAACAACAGTAGTTCTTATTaGAATATGCACTGTGGGCCCAGCTATGTGACTACATGGCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: ATSFGKGEHNNSSSY*NMHCGPSYVTTWQG Trigger: GCCTTGCCATGTAGTCACATAGCTGGGCCCACAGTGCATATTCCAATAAGAACTACTGTTGTTGTGTTCCCCTTTGCCAAAACTTGTCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR GCA 90 bp | AGGGAGCACATGCAGGGAGCACTGCTTCATCTAGGTTCAGACATCTaGCATGGACTTCAGGTCAGAGGTTTTACTTCTTTTCTAGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: REHMQGALLHLGSDI*HGLQVRGFTSFLVH Trigger: ATGAACTAGAAAAGAAGTAAAACCTCTGACCTGAAGTCCATGGCAGATGTCTGAACCTAGATGAAGCAGTGCTCCCTGCATGTGCTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR CCA 90 bp | GCACATGCAGGGAGCACTGCTTCATCTAGGTTCAGACATCTGCCATaGACTTCAGGTCAGAGGTTTTACTTCTTTTCTAGTTCATACACT | + |
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Preference number: 1 (lower is better) Translates to: AHAGSTASSRFRHLP*TSGQRFYFFSSSYT Trigger: AGTGTATGAACTAGAAAAGAAGTAAAACCTCTGACCTGAAGTCCATGGCAGATGTCTGAACCTAGATGAAGCAGTGCTCCCTGCATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR TCA 90 bp | GGACAGCCAGGGCTATTACACAGAGAGACCCTGAAACATACTACATaGTCTGAAAGCTATGCTACAGACAGAAGTTCACTGACTGATAAG | + |
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Preference number: 1 (lower is better) Translates to: GQPGLLHRETLKHTT*SESYATDRSSLTDK Trigger: CTTATCAGTCAGTGAACTTCTGTCTGTAGCATAGCTTTCAGATCATGTAGTATGTTTCAGGGTCTCTCTGTGTAATAGCCCTGGCTGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR CCA 90 bp | AGTGAACATTTAAGACTTTCAATTTCTTTAGCAGCCCAAGTAAGGTaGGAAACAAGTATACAGGTTGGGGTGTATGATGATGCACACCAC | + |
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Preference number: 1 (lower is better) Translates to: SEHLRLSISLAAQVR*ETSIQVGVYDDAHH Trigger: GTGGTGTGCATCATCATACACCCCAACCTGTATACTTGTTTCCCACCTTACTTGGGCTGCTAAAGAAATTGAAAGTCTTAAATGTTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTTAACTGCTTCCCAGCCCACACTGTACTCTGCACAGGTCTGCTCTGACGGAAAGATCCACATTAAATaGATCTTACCTTTGGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: CLTASQPTLYSAQVCSDGKIHIK*ILPLAH Trigger: ATGAGCCAAAGGTAAGATGCATTTAATGTGGATCTT...TCCGTCAGAGCAGACCTGTGCAGAGTACAGTGTGGGCTGGGAAGCAGTTAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR-3UTR CCA 90 bp | CCACAGTCCTCACACTTGAGAGATGAAGGAAACAGGACCAGTAATTCAAGACTAAGCTGGAAGTCAGCTTaGGCTATGACACTGTTCACT | + |
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Preference number: 2 (lower is better) Translates to: PQSSHLRDEGNRTSNSRLSWKSA*AMTLFT Trigger: AGTGAACAGTGTCATAGCCCAAGCTGACTTCCAGCT...TAGTCTTGAATTACTGGTCCTGTTTCCTTCATCTCTCAAGTGTGAGGACTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGTCTTGCTCGAACAATCATTTCCATCTGAAAGACATAGCCTTTGGAGACACGGTCTCAGCAGAATTTaGGTTATAAAATTGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SVLLEQSFPSERHSLWRHGLSRI*VIKLAP Trigger: TGGGGCCAATTTTATAACTCAAATTCTGCTGAGACC...GTGTCTCCAAAGGCTATGTCTTTCAGATGGAAATGATTGTTCGAGCAAGACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099072.11 |
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| 3UTR CAA 90 bp | ATTAAGGATGAAACAAGTCACTTCCCCATGGATGTGCGACAAGTTTaGGCAAAGGGGAACACAACAACAGTAGTTCTTATTGGAATATGC | + |
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Preference number: 2 (lower is better) Translates to: IKDETSHFPMDVRQV*AKGNTTTVVLIGIC Trigger: GCATATTCCAATAAGAACTACTGTTGTTGTGTTCCCCTTTGCCAAAACTTGTCGCACATCCATGGGGAAGTGACTTGTTTCATCCTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAGTGAACATTTAAGACTTTCAATTTCTTTAGCAGCCCAAGTAAGGTGGGAATCAAAACCTAAAACATaGTCTTTGGAGACAGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GSEHLRLSISLAAQVRWESKPKT*SLETEA Trigger: TGCCTCTGTCTCCAAAGAGCATGTTTTAGGTTTTGA...TTCCCACCTTACTTGGGCTGCTAAAGAAATTGAAAGTCTTAAATGTTCACTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR TCA 72 bp | TTCCCAGCCCACACTGTACTCTGCACAGGTCTGCTCTaGCGGACCAGGCTATGCTCAGTCTGCATGCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: FPAHTVLCTGLL*RTRLCSVCMQG Trigger: TCCCTGCATGCAGACTGAGCATAGCCTGGTCCGTCAGAGCAGACCTGTGCAGAGTACAGTGTGGGCTGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR GCA 72 bp | ACTGCTTCCCAGCCCACACTGTACTCTGCACAGGTCTaGTCTGACGGACCAGGCTATGCTCAGTCTGCATGC | + |
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Preference number: 3 (lower is better) Translates to: TASQPTLYSAQV*SDGPGYAQSAC Trigger: GCATGCAGACTGAGCATAGCCTGGTCCGTCAGAGCAGACCTGTGCAGAGTACAGTGTGGGCTGGGAAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR GCA 72 bp | GTCTGCTCTGACGGACCAGGCTATGCTCAGTCTGCATaGAGGGAGCACATGCAGGGAGCACTGCTTCATCTA | + |
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Preference number: 3 (lower is better) Translates to: VCSDGPGYAQSA*REHMQGALLHL Trigger: TAGATGAAGCAGTGCTCCCTGCATGTGCTCCCTGCATGCAGACTGAGCATAGCCTGGTCCGTCAGAGCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTCTTGCTCGAACAATCATTTCCATCTGAAAGACATAGCCTTTGGAGACACAACACCCCCATTCCCCTaGTATCGAGTTCCAGAGACA | + |
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Preference number: 3 (lower is better) Translates to: LSCSNNHFHLKDIAFGDTTPPFP*YRVPET Trigger: TGTCTCTGGAACTCGATACAAGGGGAATGGGGGTGT...TGTGTCTCCAAAGGCTATGTCTTTCAGATGGAAATGATTGTTCGAGCAAGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099072.11 |
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| 3UTR-3UTR CAA 90 bp | TTAGCAGCCCAAGTAAGGTGGGAAACAAGTATACAGGTTGGGGTGTATGATGATCCACAGTCCTCACACTaGAGAGATGAAGGAAACAGG | + |
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Preference number: 3 (lower is better) Translates to: LAAQVRWETSIQVGVYDDPQSSH*RDEGNR Trigger: CCTGTTTCCTTCATCTCTCAAGTGTGAGGACTGTGG...ATCATCATACACCCCAACCTGTATACTTGTTTCCCACCTTACTTGGGCTGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR GCA 72 bp | TGGGCCCAGCTATGTGACTACATGGCAAGGCTTTCATaGTCAAAACAAAGTGAAGGTGTAGCTCACGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: WAQLCDYMARLS*SKQSEGVAHVC Trigger: ACAAACGTGAGCTACACCTTCACTTTGTTTTGAGCATGAAAGCCTTGCCATGTAGTCACATAGCTGGGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR CCA 72 bp | TGGAATATGCACTGTGGGCCCAGCTATGTGACTACATaGCAAGGCTTTCATGCTCAAAACAAAGTGAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: WNMHCGPSYVTT*QGFHAQNKVKV Trigger: CACCTTCACTTTGTTTTGAGCATGAAAGCCTTGCCATGTAGTCACATAGCTGGGCCCACAGTGCATATTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR CCA 72 bp | GGGAGCACTGCTTCATCTAGGTTCAGACATCTGCCATaGACTTCAGGTCAGAGGTTTTACTTCTTTTCTAGT | + |
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Preference number: 3 (lower is better) Translates to: GSTASSRFRHLP*TSGQRFYFFSS Trigger: ACTAGAAAAGAAGTAAAACCTCTGACCTGAAGTCCATGGCAGATGTCTGAACCTAGATGAAGCAGTGCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR TCA 72 bp | CCTGTTAAGTCTGACGCTCCAGGTCTCAGCAGAATTTaGGTTATAAAATTGGCCCCACGGCTGATTATCTTT | + |
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Preference number: 3 (lower is better) Translates to: PVKSDAPGLSRI*VIKLAPRLIIF Trigger: AAAGATAATCAGCCGTGGGGCCAATTTTATAACTCAAATTCTGCTGAGACCTGGAGCGTCAGACTTAACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099072.11 |
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| 3UTR CCA 72 bp | TTTGGCAAAGGGGAACACAACAACAGTAGTTCTTATTaGAATATGCACTGTGGGCCCAGCTATGTGACTACA | + |
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Preference number: 3 (lower is better) Translates to: FGKGEHNNSSSY*NMHCGPSYVTT Trigger: TGTAGTCACATAGCTGGGCCCACAGTGCATATTCCAATAAGAACTACTGTTGTTGTGTTCCCCTTTGCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR TCA 72 bp | GGGCTATTACACAGAGAGACCCTGAAACATACTACATaGTCTGAAAGCTATGCTACAGACAGAAGTTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: GLLHRETLKHTT*SESYATDRSSL Trigger: CAGTGAACTTCTGTCTGTAGCATAGCTTTCAGATCATGTAGTATGTTTCAGGGTCTCTCTGTGTAATAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR-3UTR CAA 90 bp | CATCTGTCTTGCTCGAACAATCATTTCCATCTGAAAGACATAGCCTTTGGAGACAGGTCTCAGCAGAATTaGAGTTATAAAATTGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: HLSCSNNHFHLKDIAFGDRSQQN*SYKIGP Trigger: GGGGCCAATTTTATAACTCAAATTCTGCTGAGACCT...GTCTCCAAAGGCTATGTCTTTCAGATGGAAATGATTGTTCGAGCAAGACAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099072.11 |
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| 3UTR TCA 72 bp | AGCTATGCTACAGACAGAAGTTCACTGACTGATAAGTaGAGTATCTTCCCTGACAGTATGGAGCAACTTATC | + |
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Preference number: 3 (lower is better) Translates to: SYATDRSSLTDK*SIFPDSMEQLI Trigger: GATAAGTTGCTCCATACTGTCAGGGAAGATACTTCACTTATCAGTCAGTGAACTTCTGTCTGTAGCATAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR TCA 72 bp | CATGATCTGAAAGCTATGCTACAGACAGAAGTTCACTaGCTGATAAGTGAAGTATCTTCCCTGACAGTATGG | + |
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Preference number: 3 (lower is better) Translates to: HDLKAMLQTEVH*LISEVSSLTVW Trigger: CCATACTGTCAGGGAAGATACTTCACTTATCAGTCAGTGAACTTCTGTCTGTAGCATAGCTTTCAGATCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR CCA 72 bp | ACTAGCTTTGACTACAGAGTAAGCTGGAAGTCAGCTTaGGCTATGACACTGTTCACTAAATGTGATTATGCA | + |
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Preference number: 3 (lower is better) Translates to: TSFDYRVSWKSA*AMTLFTKCDYA Trigger: TGCATAATCACATTTAGTGAACAGTGTCATAGCCCAAGCTGACTTCCAGCTTACTCTGTAGTCAAAGCTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR TCA 72 bp | TCCCAACTTGGATTCACCATAAACTCGATCCACAAATaGAATTGGAACCTCACCAATAGTGTAATTCATCTG | + |
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Preference number: 3 (lower is better) Translates to: SQLGFTINSIHK*NWNLTNSVIHL Trigger: CAGATGAATTACACTATTGGTGAGGTTCCAATTTCATTTGTGGATCGAGTTTATGGTGAATCCAAGTTGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099072.11 |
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| 3UTR CCA 72 bp | TTAAGACTTTCAATTTCTTTAGCAGCCCAAGTAAGGTaGGAAACAAGTATACAGGTTGGGGTGTATGATGAT | + |
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Preference number: 3 (lower is better) Translates to: LRLSISLAAQVR*ETSIQVGVYDD Trigger: ATCATCATACACCCCAACCTGTATACTTGTTTCCCACCTTACTTGGGCTGCTAAAGAAATTGAAAGTCTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| CDS-3UTR GCA 90 bp | ACGGACCAGGCTATGCTCAGTCTGCATGCAGGGAGCACATGCAGGGAGCACTGCGGGCCCATAGATCTCTaGCAGTTGTTCAGCAACTTC | + |
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Preference number: 4 (lower is better) Translates to: TDQAMLSLHAGSTCREHCGPIDL*QLFSNF Trigger: GAAGTTGCTGAACAACTGGCAGAGATCTATGGGCCC...GCAGTGCTCCCTGCATGTGCTCCCTGCATGCAGACTGAGCATAGCCTGGTCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| 3UTR CAA 72 bp | TGCTCTTTGGAGACAGAGGCAGATGGATCTCTGAGTTaGGTCTACAAAGCCAGTTCTAGGACAGCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: CSLETEADGSLS*VYKASSRTARA Trigger: AGCCCTGGCTGTCCTAGAACTGGCTTTGTAGACCAAACTCAGAGATCCATCTGCCTCTGTCTCCAAAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| CDS-3UTR CCA 90 bp | GCCAGTTCTAGGACAGCCAGGGCTATTACACAGAGAGACCCTGAAACATACTACGGAATAAATTTGGGATaGTGGGAGAGGTCAGCATCC | + |
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Preference number: 4 (lower is better) Translates to: ASSRTARAITQRDPETYYGINLG*WERSAS Trigger: GGATGCTGACCTCTCCCACCATCCCAAATTTATTCC...GTAGTATGTTTCAGGGTCTCTCTGTGTAATAGCCCTGGCTGTCCTAGAACTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| CDS-3UTR CCA 90 bp | AGGTCTCAGCAGAATTTGAGTTATAAAATTGGCCCCACGGCTGATTATCTTTCTCCCGTTCGTTGTAGGTaGGCAACAGCACCGAGTACT | + |
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Preference number: 4 (lower is better) Translates to: RSQQNLSYKIGPTADYLSPVRCR*ATAPST Trigger: AGTACTCGGTGCTGTTGCCCACCTACAACGAACGGG...AGAAAGATAATCAGCCGTGGGGCCAATTTTATAACTCAAATTCTGCTGAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099072.11 |
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| CDS-3UTR GCA 90 bp | TCTGTCTTGCTCGAACAATCATTTCCATCTGAAAGACATAGCCTTTGGAGACACGGGCCCATAGATCTCTaGCAGTTGTTCAGCAACTTC | + |
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Preference number: 4 (lower is better) Translates to: SVLLEQSFPSERHSLWRHGPIDL*QLFSNF Trigger: GAAGTTGCTGAACAACTGGCAGAGATCTATGGGCCC...GTGTCTCCAAAGGCTATGTCTTTCAGATGGAAATGATTGTTCGAGCAAGACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099072.11 |
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| CDS-3UTR CCA 90 bp | GGAAGTGAACATTTAAGACTTTCAATTTCTTTAGCAGCCCAAGTAAGGTGGGAACCCGTTCGTTGTAGGTaGGCAACAGCACCGAGTACT | + |
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Preference number: 4 (lower is better) Translates to: GSEHLRLSISLAAQVRWEPVRCR*ATAPST Trigger: AGTACTCGGTGCTGTTGCCCACCTACAACGAACGGG...TTCCCACCTTACTTGGGCTGCTAAAGAAATTGAAAGTCTTAAATGTTCACTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| CDS-3UTR GCA 90 bp | ATGGAGCTTCTCCAGAGAAAAAGATCCACATTAAATGCATCTTACCTTTGGCTCGGGCCCATAGATCTCTaGCAGTTGTTCAGCAACTTC | + |
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Preference number: 4 (lower is better) Translates to: MELLQRKRSTLNASYLWLGPIDL*QLFSNF Trigger: GAAGTTGCTGAACAACTGGCAGAGATCTATGGGCCC...GAGCCAAAGGTAAGATGCATTTAATGTGGATCTTTTTCTCTGGAGAAGCTCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR CCA 90 bp | CCACAGTCCTCACACTTGAGAGATGAAGGAAACAGGACCAGTAATTCAAGACTATTCTCTTGTCCCGTCTaGGCTTCCATCATCTATGAT | + |
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Preference number: 4 (lower is better) Translates to: PQSSHLRDEGNRTSNSRLFSCPV*ASIIYD Trigger: ATCATAGATGATGGAAGCCCAGACGGGACAAGAGAA...TAGTCTTGAATTACTGGTCCTGTTTCCTTCATCTCTCAAGTGTGAGGACTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| CDS-3UTR CCA 90 bp | ACCTTTGGCTCATGTGTTAAGACAACATTGATAAAAATCAGTGACCCGGGCTTCGGAATAAATTTGGGATaGTGGGAGAGGTCAGCATCC | + |
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Preference number: 4 (lower is better) Translates to: TFGSCVKTTLIKISDPGFGINLG*WERSAS Trigger: GGATGCTGACCTCTCCCACCATCCCAAATTTATTCC...GAAGCCCGGGTCACTGATTTTTATCAATGTTGTCTTAACACATGAGCCAAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR CCA 90 bp | CATCTGTCTTGCTCGAACAATCATTTCCATCTGAAAGACATAGCCTTTGGAGACCCTTTTGTTTCATGGTaGGAGAGGTCAGCATCCATG | + |
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Preference number: 4 (lower is better) Translates to: HLSCSNNHFHLKDIAFGDPFVSW*ERSASM Trigger: CATGGATGCTGACCTCTCCCACCATGAAACAAAAGG...GTCTCCAAAGGCTATGTCTTTCAGATGGAAATGATTGTTCGAGCAAGACAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099072.11 |
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| CDS-3UTR CCA 90 bp | TCATCTGTCTTGCTCGAACAATCATTTCCATCTGAAAGACATAGCCTTTGGAGACCTCCTTTTGTTTCATaGTGGGAGAGGTCAGCATCC | + |
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Preference number: 4 (lower is better) Translates to: SSVLLEQSFPSERHSLWRPPFVS*WERSAS Trigger: GGATGCTGACCTCTCCCACCATGAAACAAAAGGAGG...TCTCCAAAGGCTATGTCTTTCAGATGGAAATGATTGTTCGAGCAAGACAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099072.11 |
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| CDS-3UTR CCA 90 bp | GCAAAGAGAGTCAATAACCCTTTCAGGAACGAGACTATTTCATTTCCTCCCAACTTCTCTTGTCCCGTCTaGGCTTCCATCATCTATGAT | + |
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Preference number: 4 (lower is better) Translates to: AKRVNNPFRNETISFPPNFSCPV*ASIIYD Trigger: ATCATAGATGATGGAAGCCCAGACGGGACAAGAGAA...GTTGGGAGGAAATGAAATAGTCTCGTTCCTGAAAGGGTTATTGACTCTCTTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099072.11 |
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| CDS-3UTR CCA 90 bp | CTTACCTTTGGCTCATGTGTTAAGACAACATTGATAAAAATCAGTGACCCGGGCATAAATTTGGGATGGTaGGAGAGGTCAGCATCCATG | + |
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Preference number: 4 (lower is better) Translates to: LTFGSCVKTTLIKISDPGINLGW*ERSASM Trigger: CATGGATGCTGACCTCTCCCACCATCCCAAATTTAT...GCCCGGGTCACTGATTTTTATCAATGTTGTCTTAACACATGAGCCAAAGGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| 3UTR CAA 72 bp | GAAACAAGTCACTTCCCCATGGATGTGCGACAAGTTTaGGCAAAGGGGAACACAACAACAGTAGTTCTTATT | + |
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Preference number: 4 (lower is better) Translates to: ETSHFPMDVRQV*AKGNTTTVVLI Trigger: AATAAGAACTACTGTTGTTGTGTTCCCCTTTGCCAAAACTTGTCGCACATCCATGGGGAAGTGACTTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| CDS-3UTR TCA 90 bp | CTTACCTTTGGCTCATGTGTTAAGACAACATTGATAAAAATCAGTGACCCGGGCGGTCTCAGCAGAATTTaGGTTATAAAATTGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LTFGSCVKTTLIKISDPGGLSRI*VIKLAP Trigger: TGGGGCCAATTTTATAACTCAAATTCTGCTGAGACC...GCCCGGGTCACTGATTTTTATCAATGTTGTCTTAACACATGAGCCAAAGGTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR CCA 90 bp | GCTTCTCCAGAGAAAAAGATCCACATTAAATGCATCTTACCTTTGGCTCATGTGTTCTCTTGTCCCGTCTaGGCTTCCATCATCTATGAT | + |
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Preference number: 4 (lower is better) Translates to: ASPEKKIHIKCILPLAHVFSCPV*ASIIYD Trigger: ATCATAGATGATGGAAGCCCAGACGGGACAAGAGAA...CACATGAGCCAAAGGTAAGATGCATTTAATGTGGATCTTTTTCTCTGGAGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR CCA 90 bp | ATGGAGCTTCTCCAGAGAAAAAGATCCACATTAAATGCATCTTACCTTTGGCTCATAAATTTGGGATGGTaGGAGAGGTCAGCATCCATG | + |
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Preference number: 4 (lower is better) Translates to: MELLQRKRSTLNASYLWLINLGW*ERSASM Trigger: CATGGATGCTGACCTCTCCCACCATCCCAAATTTAT...GAGCCAAAGGTAAGATGCATTTAATGTGGATCTTTTTCTCTGGAGAAGCTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR TCA 90 bp | GGCTCATGTGTTAAGACAACATTGATAAAAATCAGTGACCCGGGCTTCTCTACTAACTCGATCCACAAATaGAATTGGAACCTCACCAAT | + |
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Preference number: 4 (lower is better) Translates to: GSCVKTTLIKISDPGFSTNSIHK*NWNLTN Trigger: ATTGGTGAGGTTCCAATTTCATTTGTGGATCGAGTT...AGTAGAGAAGCCCGGGTCACTGATTTTTATCAATGTTGTCTTAACACATGAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR TCA 90 bp | GCTTCTCCAGAGAAAAAGATCCACATTAAATGCATCTTACCTTTGGCTCATGTGAACTCGATCCACAAATaGAATTGGAACCTCACCAAT | + |
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Preference number: 4 (lower is better) Translates to: ASPEKKIHIKCILPLAHVNSIHK*NWNLTN Trigger: ATTGGTGAGGTTCCAATTTCATTTGTGGATCGAGTT...CACATGAGCCAAAGGTAAGATGCATTTAATGTGGATCTTTTTCTCTGGAGAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| 3UTR CAA 72 bp | ATGCATCTTACCTTTGGCTCATGTGTTAAGACAACATaGATAAAAATCAGTGACCCGGGCTTCTCTACTTTT | + |
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Preference number: 4 (lower is better) Translates to: MHLTFGSCVKTT*IKISDPGFSTF Trigger: AAAAGTAGAGAAGCCCGGGTCACTGATTTTTATCAATGTTGTCTTAACACATGAGCCAAAGGTAAGATGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR TCA 90 bp | ATGCATCTTACCTTTGGCTCATGTGTTAAGACAACATTGATAAAAATCAGTGACGGTCTCAGCAGAATTTaGGTTATAAAATTGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: MHLTFGSCVKTTLIKISDGLSRI*VIKLAP Trigger: TGGGGCCAATTTTATAACTCAAATTCTGCTGAGACC...GTCACTGATTTTTATCAATGTTGTCTTAACACATGAGCCAAAGGTAAGATGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR CAA 90 bp | GCAAAGAGAGTCAATAACCCTTTCAGGAACGAGACTATTTCATTTCCTCCCAACGTTCAGCAACTTCTCTaGTCCCGTCTGGGCTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: AKRVNNPFRNETISFPPNVQQLL*SRLGFH Trigger: ATGGAAGCCCAGACGGGACAAGAGAAGTTGCTGAAC...GTTGGGAGGAAATGAAATAGTCTCGTTCCTGAAAGGGTTATTGACTCTCTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099072.11 |
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| CDS-3UTR CAA 90 bp | ATGGAGCTTCTCCAGAGAAAAAGATCCACATTAAATGCATCTTACCTTTGGCTCGTTCAGCAACTTCTCTaGTCCCGTCTGGGCTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: MELLQRKRSTLNASYLWLVQQLL*SRLGFH Trigger: ATGGAAGCCCAGACGGGACAAGAGAAGTTGCTGAAC...GAGCCAAAGGTAAGATGCATTTAATGTGGATCTTTTTCTCTGGAGAAGCTCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR CAA 90 bp | GCTTCTCCAGAGAAAAAGATCCACATTAAATGCATCTTACCTTTGGCTCATGTGACACCCCCATTCCCCTaGTATCGAGTTCCAGAGACA | + |
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Preference number: 5 (lower is better) Translates to: ASPEKKIHIKCILPLAHVTPPFP*YRVPET Trigger: TGTCTCTGGAACTCGATACAAGGGGAATGGGGGTGT...CACATGAGCCAAAGGTAAGATGCATTTAATGTGGATCTTTTTCTCTGGAGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR CAA 90 bp | CCATCCATAAACACCCCCATTCCCCTTGTATCGAGTTCCAGAGACAATATCAAAATAGATCTCTGCCAGTaGTTCAGCAACTTCTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: PSINTPIPLVSSSRDNIKIDLCQ*FSNFSC Trigger: ACAAGAGAAGTTGCTGAACAACTGGCAGAGATCTAT...TTTGATATTGTCTCTGGAACTCGATACAAGGGGAATGGGGGTGTTTATGGATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099072.11 |
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| CDS-3UTR CAA 90 bp | CCACAGTCCTCACACTTGAGAGATGAAGGAAACAGGACCAGTAATTCAAGACTAAATTCAGGAATAAATTaGGGATGGTGGGAGAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: PQSSHLRDEGNRTSNSRLNSGIN*GWWERS Trigger: TGACCTCTCCCACCATCCCAAATTTATTCCTGAATT...TAGTCTTGAATTACTGGTCCTGTTTCCTTCATCTCTCAAGTGTGAGGACTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154111.8 |
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| CDS CCA 90 bp | CCCATAGATCTCTGCCAGTTGTTCAGCAACTTCTCTTGTCCCGTCTaGGCTTCCATCATCTATGATTATAATTTCATAGTTGATTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: PIDLCQLFSNFSCPV*ASIIYDYNFIVDCS Trigger: ACTGCAATCAACTATGAAATTATAATCATAGATGATGGAAGCCCAGACGGGACAAGAGAAGTTGCTGAACAACTGGCAGAGATCTATGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109193.8 |
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| CDS CCA 90 bp | CCCATAGATCTCTGCCAGTTGTTCAGCAACTTCTCTTGTCCCGTCTaGGCTTCCATCATCTATGATTATAATTTCATAGTTGATTGCACT | + |
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Preference number: 5 (lower is better) Translates to: PIDLCQLFSNFSCPV*ASIIYDYNFIVDCT Trigger: AGTGCAATCAACTATGAAATTATAATCATAGATGATGGAAGCCCAGACGGGACAAGAGAAGTTGCTGAACAACTGGCAGAGATCTATGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099072.11 ENSMUST00000154111.8 |
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| CDS-3UTR CAA 90 bp | TGTGTTAAGACAACATTGATAAAAATCAGTGACCCGGGCTTCTCTACTTTTAATGTTCAGCAACTTCTCTaGTCCCGTCTGGGCTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: CVKTTLIKISDPGFSTFNVQQLL*SRLGFH Trigger: ATGGAAGCCCAGACGGGACAAGAGAAGTTGCTGAAC...ATTAAAAGTAGAGAAGCCCGGGTCACTGATTTTTATCAATGTTGTCTTAACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR CAA 90 bp | GGCTCATGTGTTAAGACAACATTGATAAAAATCAGTGACCCGGGCTTCTCTACTAATTCAGGAATAAATTaGGGATGGTGGGAGAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: GSCVKTTLIKISDPGFSTNSGIN*GWWERS Trigger: TGACCTCTCCCACCATCCCAAATTTATTCCTGAATT...AGTAGAGAAGCCCGGGTCACTGATTTTTATCAATGTTGTCTTAACACATGAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR CAA 90 bp | GGCTCATGTGTTAAGACAACATTGATAAAAATCAGTGACCCGGGCTTCTCTACTAGGTCTCAGCAGAATTaGAGTTATAAAATTGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: GSCVKTTLIKISDPGFSTRSQQN*SYKIGP Trigger: GGGGCCAATTTTATAACTCAAATTCTGCTGAGACCT...AGTAGAGAAGCCCGGGTCACTGATTTTTATCAATGTTGTCTTAACACATGAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR CAA 90 bp | GAGCTTCTCCAGAGAAAAAGATCCACATTAAATGCATCTTACCTTTGGCTCATGATAGATCTCTGCCAGTaGTTCAGCAACTTCTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: ELLQRKRSTLNASYLWLMIDLCQ*FSNFSC Trigger: ACAAGAGAAGTTGCTGAACAACTGGCAGAGATCTAT...CATGAGCCAAAGGTAAGATGCATTTAATGTGGATCTTTTTCTCTGGAGAAGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR CAA 90 bp | CTTACCTTTGGCTCATGTGTTAAGACAACATTGATAAAAATCAGTGACCCGGGCTGTAATTCATCTGTCTaGCTCGAACAATCATTTCCA | + |
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Preference number: 5 (lower is better) Translates to: LTFGSCVKTTLIKISDPGCNSSV*LEQSFP Trigger: TGGAAATGATTGTTCGAGCAAGACAGATGAATTACA...GCCCGGGTCACTGATTTTTATCAATGTTGTCTTAACACATGAGCCAAAGGTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR CAA 90 bp | GCTTCTCCAGAGAAAAAGATCCACATTAAATGCATCTTACCTTTGGCTCATGTGTGTAATTCATCTGTCTaGCTCGAACAATCATTTCCA | + |
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Preference number: 5 (lower is better) Translates to: ASPEKKIHIKCILPLAHVCNSSV*LEQSFP Trigger: TGGAAATGATTGTTCGAGCAAGACAGATGAATTACA...CACATGAGCCAAAGGTAAGATGCATTTAATGTGGATCTTTTTCTCTGGAGAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS-3UTR CAA 90 bp | TGTGTTAAGACAACATTGATAAAAATCAGTGACCCGGGCTTCTCTACTTTTAATAGGTCTCAGCAGAATTaGAGTTATAAAATTGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: CVKTTLIKISDPGFSTFNRSQQN*SYKIGP Trigger: GGGGCCAATTTTATAACTCAAATTCTGCTGAGACCT...ATTAAAAGTAGAGAAGCCCGGGTCACTGATTTTTATCAATGTTGTCTTAACACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109193.8 ENSMUST00000154111.8 |
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| CDS TCA 72 bp | CACTCTCGGAGAAGCTCTTCACCAGCAGCCACACGATaGGCGGCAGGTTCTCCCGTTCGTTGTAGGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: HSRRSSSPAATR*AAGSPVRCRWA Trigger: TGCCCACCTACAACGAACGGGAGAACCTGCCGCTCATCGTGTGGCTGCTGGTGAAGAGCTTCTCCGAGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099072.11 ENSMUST00000154111.8 |
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| CDS CCA 72 bp | CTCTGCCAGTTGTTCAGCAACTTCTCTTGTCCCGTCTaGGCTTCCATCATCTATGATTATAATTTCATAGTT | + |
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Preference number: 6 (lower is better) Translates to: LCQLFSNFSCPV*ASIIYDYNFIV Trigger: AACTATGAAATTATAATCATAGATGATGGAAGCCCAGACGGGACAAGAGAAGTTGCTGAACAACTGGCAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099072.11 ENSMUST00000109193.8 ENSMUST00000154111.8 |
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