Pregenerated sensors for DPH7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026975Ensembl transcript IDs: ENSMUST00000028351.9, ENSMUST00000124383.2, ENSMUST00000126909.8, ENSMUST00000135339.8, ENSMUST00000143253.8, ENSMUST00000153375.8
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCTGTTCTCTGGCCCTCACATTCCATCAGGCGGAGCAGCCCTATaGATCCACTGGCGTTTGCCAAGCCTAAAAGCACATGGCCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: GLFSGPHIPSGGAAL*IHWRLPSLKAHGQR Trigger: TCTCTGGCCATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGCTGCTCCGCCTGATGGAATGTGAGGGCCAGAGAACAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135339.8 |
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| 3UTR TCA 90 bp | ATCTTGAAGCCATTGTGCATGCAGGCCGCCAGGAGTAGATGGTGGTaGACTGGGTGCCACTTGAGCCTCCACACACCTCCTTGCACTGGT | + |
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Preference number: 1 (lower is better) Translates to: ILKPLCMQAARSRWW*TGCHLSLHTPPCTG Trigger: ACCAGTGCAAGGAGGTGTGTGGAGGCTCAAGTGGCACCCAGTTCACCACCATCTACTCCTGGCGGCCTGCATGCACAATGGCTTCAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124383.2 ENSMUST00000126909.8 |
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| 3UTR CCA 90 bp | TCTGGCCCTCACATTCCATCAGGCGGAGCAGCCCTATGGATCCACTaGCGTTTGCCAAGCCTAAAAGCACATGGCCAGAGACTGGGATGT | + |
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Preference number: 1 (lower is better) Translates to: SGPHIPSGGAALWIH*RLPSLKAHGQRLGC Trigger: ACATCCCAGTCTCTGGCCATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGCTGCTCCGCCTGATGGAATGTGAGGGCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135339.8 |
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| 3UTR CCA 90 bp | GTGGTGAACTGGGTGCCACTTGAGCCTCCACACACCTCCTTGCACTaGTACATCCGCCAATGGCTGTCTTATGTTTCGAGTGTCCCACAG | + |
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Preference number: 1 (lower is better) Translates to: VVNWVPLEPPHTSLH*YIRQWLSYVSSVPQ Trigger: CTGTGGGACACTCGAAACATAAGACAGCCATTGGCGGATGTACCAGTGCAAGGAGGTGTGTGGAGGCTCAAGTGGCACCCAGTTCACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124383.2 ENSMUST00000126909.8 |
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| 3UTR CCA 90 bp | CAGGTGGCCAGGAGGCTATTGTCAAAGCTCTGCCCACCAGAGCAGTaGCTAAGATCACGAGTCTTGACTGAGGATGAGGAGCAGTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: QVARRLLSKLCPPEQ*LRSRVLTEDEEQSL Trigger: CAAAGACTGCTCCTCATCCTCAGTCAAGACTCGTGATCTTAGCCACTGCTCTGGTGGGCAGAGCTTTGACAATAGCCTCCTGGCCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
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| 3UTR CCA 90 bp | TCTCCCACTTCCAAAGGTGGAGAACATGGTCATAAAAGGAGCAGGTaGCCAGGAGGCTATTGTCAAAGCTCTGCCCACCAGAGCAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: SPTSKGGEHGHKRSR*PGGYCQSSAHQSSG Trigger: GCCACTGCTCTGGTGGGCAGAGCTTTGACAATAGCCTCCTGGCCACCTGCTCCTTTTATGACCATGTTCTCCACCTTTGGAAGTGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
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| 3UTR CCA 90 bp | AGCAGCCCTATGGATCCACTGGCGTTTGCCAAGCCTAAAAGCACATaGCCAGAGACTGGGATGTGGCACCATTTCATGTCCAGGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: SSPMDPLAFAKPKST*PETGMWHHFMSRTA Trigger: TGCTGTCCTGGACATGAAATGGTGCCACATCCCAGTCTCTGGCCATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
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| 3UTR TCA 90 bp | GGGCTGTTCTCTGGCCCTGACAGATTTCCCAGTGGACCAATCCATTaGCAAGGACAGACAATTCTCATCCAGGGCGAGGCTGGATATTGG | + |
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Preference number: 1 (lower is better) Translates to: GLFSGPDRFPSGPIH*QGQTILIQGEAGYW Trigger: CCAATATCCAGCCTCGCCCTGGATGAGAATTGTCTGTCCTTGTCAATGGATTGGTCCACTGGGAAATCTGTCAGGGCCAGAGAACAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126909.8 ENSMUST00000143253.8 ENSMUST00000153375.8 |
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| 3UTR CCA 90 bp | CCACTTGAGCCTCCACACACCTCCTTGCACTGGTACATCCGCCAATaGCTGTCTTATGTTTCGAGTGTCCCACAGCAGAACATGCTCATC | + |
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Preference number: 1 (lower is better) Translates to: PLEPPHTSLHWYIRQ*LSYVSSVPQQNMLI Trigger: GATGAGCATGTTCTGCTGTGGGACACTCGAAACATAAGACAGCCATTGGCGGATGTACCAGTGCAAGGAGGTGTGTGGAGGCTCAAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124383.2 ENSMUST00000126909.8 |
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| 3UTR CCA 90 bp | CTGGCGTTTGCCAAGCCTAAAAGCACATGGCCAGAGACTGGGATGTaGCACCATTTCATGTCCAGGACAGCAGAAGAGTCCCTTCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: LAFAKPKSTWPETGM*HHFMSRTAEESLLW Trigger: CCAAAGAAGGGACTCTTCTGCTGTCCTGGACATGAAATGGTGCCACATCCCAGTCTCTGGCCATGTGCTTTTAGGCTTGGCAAACGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
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| 3UTR CCA 90 bp | TGTTGTTCTCACATTCCATCAGGCGGAGCAGCCCTATGGATCCACTaGCGTTTGCCAAGCCTAAAAGCACATGGCCAGAGACTGGGATGT | + |
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Preference number: 1 (lower is better) Translates to: CCSHIPSGGAALWIH*RLPSLKAHGQRLGC Trigger: ACATCCCAGTCTCTGGCCATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGCTGCTCCGCCTGATGGAATGTGAGAACAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143253.8 |
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| 3UTR CCA 90 bp | GGGTGTAACTGTTGTTCTCACATTCCATCAGGCGGAGCAGCCCTATaGATCCACTGGCGTTTGCCAAGCCTAAAAGCACATGGCCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: GCNCCSHIPSGGAAL*IHWRLPSLKAHGQR Trigger: TCTCTGGCCATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGCTGCTCCGCCTGATGGAATGTGAGAACAACAGTTACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143253.8 |
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| 3UTR TCA 90 bp | AGGCAGTCATCTCCCCCTGACAGATTTCCCAGTGGACCAATCCATTaGCAAGGACAGACAATTCTCATCCAGGGCGAGGCTGGATATTGG | + |
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Preference number: 1 (lower is better) Translates to: RQSSPPDRFPSGPIH*QGQTILIQGEAGYW Trigger: CCAATATCCAGCCTCGCCCTGGATGAGAATTGTCTGTCCTTGTCAATGGATTGGTCCACTGGGAAATCTGTCAGGGGGAGATGACTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124383.2 |
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| 3UTR CCA 90 bp | ATGTGGCACCATTTCATGTCCAGGACAGCAGAAGAGTCCCTTCTTTaGACCTCAAGCAGAGGTTTAGCCGTGTTGTGCTCACTGAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: MWHHFMSRTAEESLL*TSSRGLAVLCSLKL Trigger: CAGCTTCAGTGAGCACAACACGGCTAAACCTCTGCTTGAGGTCCAAAGAAGGGACTCTTCTGCTGTCCTGGACATGAAATGGTGCCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
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| 3UTR GCA 90 bp | AGCTGTAGTTCAGCTGTGCCCTCATTCACCATCAGGAGGTGCAACTaGCCCTTAGAATCACTGCTAATGATCTTCAAGGGCTGTTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: SCSSAVPSFTIRRCN*PLESLLMIFKGCSL Trigger: CAGAGAACAGCCCTTGAAGATCATTAGCAGTGATTCTAAGGGGCAGTTGCACCTCCTGATGGTGAATGAGGGCACAGCTGAACTACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126909.8 ENSMUST00000135339.8 |
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| 3UTR GCA 90 bp | GCTACTAGCTGTAGTTCAGCTGTGCCCTCATTCACCATCAGGAGGTaGAACTGCCCCTTAGAATCACTGCTAATGATCTTCAAGGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: ATSCSSAVPSFTIRR*NCPLESLLMIFKGC Trigger: ACAGCCCTTGAAGATCATTAGCAGTGATTCTAAGGGGCAGTTGCACCTCCTGATGGTGAATGAGGGCACAGCTGAACTACAGCTAGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126909.8 ENSMUST00000135339.8 |
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| 3UTR CCA 90 bp | TGGGATGTTAAAACAGTTATGTCCTGCTTCTCCTCAATGGCCTTCTaGCAGTTGAGAATCTTGAAGCCATTGTGCATGCAGGCCGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: WDVKTVMSCFSSMAF*QLRILKPLCMQAAR Trigger: CCTGGCGGCCTGCATGCACAATGGCTTCAAGATTCTCAACTGCCAGAAGGCCATTGAGGAGAAGCAGGACATAACTGTTTTAACATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
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| 3UTR TCA 90 bp | ACCTTTAGGCTAGAGTGGTCTGCTGCTTTGACTCCCATGTCATTCTaGTCAAAGAACCAGGTAGGAGTGGGCTTCATGGAATGGAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: TFRLEWSAALTPMSF*SKNQVGVGFMEWKS Trigger: GCTTTTCCATTCCATGAAGCCCACTCCTACCTGGTTCTTTGATCAGAATGACATGGGAGTCAAAGCAGCAGACCACTCTAGCCTAAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
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| 3UTR CCA 90 bp | AGCCAGGACCAGTCAGCCCCATATACTAATGAGTTAGGCATTTCGTaGGATGTTAAAACAGTTATGTCCTGCTTCTCCTCAATGGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: SQDQSAPYTNELGIS*DVKTVMSCFSSMAF Trigger: GAAGGCCATTGAGGAGAAGCAGGACATAACTGTTTTAACATCCCACGAAATGCCTAACTCATTAGTATATGGGGCTGACTGGTCCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
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| 3UTR GCA 90 bp | ACTAATGAGTTAGGCATTTCGTGGGATGTTAAAACAGTTATGTCCTaGTTCTCCTCAATGGCCTTCTGGCAGTTGAGAATCTTGAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: TNELGISWDVKTVMS*FSSMAFWQLRILKP Trigger: TGGCTTCAAGATTCTCAACTGCCAGAAGGCCATTGAGGAGAAGCAGGACATAACTGTTTTAACATCCCACGAAATGCCTAACTCATTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
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| 3UTR GCA 90 bp | GTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTaGCAAAACAGTAACACAAGAGTCCATTCTCAATGGTCAGCACTC | + |
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Preference number: 1 (lower is better) Translates to: VKIYPEHLVVELEIH*QNSNTRVHSQWSAL Trigger: GAGTGCTGACCATTGAGAATGGACTCTTGTGTTACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
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| 3UTR CAA 90 bp | CCTCACATTCCATCAGGCGGAGCAGCCCTATGGATCCACTGGCGTTaGCCAAGCCTAAAAGCACATGGCCAGAGACTGGGATGTGGCACC | + |
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Preference number: 2 (lower is better) Translates to: PHIPSGGAALWIHWR*PSLKAHGQRLGCGT Trigger: GGTGCCACATCCCAGTCTCTGGCCATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGCTGCTCCGCCTGATGGAATGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135339.8 |
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| 3UTR CAA 90 bp | TCTCACATTCCATCAGGCGGAGCAGCCCTATGGATCCACTGGCGTTaGCCAAGCCTAAAAGCACATGGCCAGAGACTGGGATGTGGCACC | + |
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Preference number: 2 (lower is better) Translates to: SHIPSGGAALWIHWR*PSLKAHGQRLGCGT Trigger: GGTGCCACATCCCAGTCTCTGGCCATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGCTGCTCCGCCTGATGGAATGTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143253.8 |
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| 3UTR CAA 90 bp | CAGTGCAGGCTGCAGGTACACCGCCGCAATTCTACTCTTAAGTGGTaGTTTTGGATGCTCAGGAAACCTCCCGGAAGTAGGCACGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: QCRLQVHRRNSTLKW*FWMLRKPPGSRHGP Trigger: GGGACCGTGCCTACTTCCGGGAGGTTTCCTGAGCATCCAAAACAACCACTTAAGAGTAGAATTGCGGCGGTGTACCTGCAGCCTGCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTTGAGAATCTTGAAGCCATTGTGCATGCAGGCCGCCAGGAGTAGATGGTGGGAACTGGGTGCCACTTaGGCCTCCACACACCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: QLRILKPLCMQAARSRWWELGAT*ASTHLL Trigger: AAGGAGGTGTGTGGAGGCTCAAGTGGCACCCAGTTC...CCACCATCTACTCCTGGCGGCCTGCATGCACAATGGCTTCAAGATTCTCAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124383.2 ENSMUST00000126909.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCAGAAGGCAGTCATCTCCCCCTGAATACACGAGTTCTGTCTGCCAGTAATGGCGGAGCAGCCCTATaGATCCACTGGCGTTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LSEGSHLPLNTRVLSASNGGAAL*IHWRLP Trigger: TGGCAAACGCCAGTGGATCCATAGGGCTGCTCCGCC...ATTACTGGCAGACAGAACTCGTGTATTCAGGGGGAGATGACTGCCTTCTGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135339.8 |
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| 3UTR CAA 90 bp | AGCCTTCAGTTCAGCTCTGGTATGAGCGTTAGCGGGGCCTTCCACTaGGCGATCCATGGTTTGTTCCTGAGAATGTATTGGTGGCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: SLQFSSGMSVSGAFH*AIHGLFLRMYWWLL Trigger: GAGGAGCCACCAATACATTCTCAGGAACAAACCATGGATCGCCAAGTGGAAGGCCCCGCTAACGCTCATACCAGAGCTGAACTGAAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAAGCCTAAAAGCACATGGCCAGAGACTGGGATGTGGCACCATTTCATGTCCCGACCTAAACGAACTTaGGGCTCACTGCCATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: AKPKSTWPETGMWHHFMSRPKRT*GSLPSS Trigger: ACTGGATGGCAGTGAGCCTCAAGTTCGTTTAGGTCG...GGACATGAAATGGTGCCACATCCCAGTCTCTGGCCATGTGCTTTTAGGCTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
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| 3UTR-3UTR GCA 90 bp | TGCACTGGTACATCCGCCAATGGCTGTCTTATGTTTCGAGTGTCCCACAGCAGAGGCTGCTCTGGATGCTaGACACACCCATGCAATGTC | + |
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Preference number: 2 (lower is better) Translates to: CTGTSANGCLMFRVSHSRGCSGC*THPCNV Trigger: GACATTGCATGGGTGTGTGCAGCATCCAGAGCAGCC...TCTGCTGTGGGACACTCGAAACATAAGACAGCCATTGGCGGATGTACCAGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124383.2 ENSMUST00000126909.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTTCGAGTGTCCCACAGCAGAACATGCTCATCATAGCTTCCAGTTGCCAGTAGGGGGCTGCTCTGGATaGTGCACACACCCATGCAAT | + |
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Preference number: 2 (lower is better) Translates to: CFECPTAEHAHHSFQLPVGGCSG*CTHPCN Trigger: ATTGCATGGGTGTGTGCAGCATCCAGAGCAGCCCCC...TACTGGCAACTGGAAGCTATGATGAGCATGTTCTGCTGTGGGACACTCGAAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124383.2 ENSMUST00000126909.8 |
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| 3UTR CAA 90 bp | GATGTGGCACCATTTCATGTCCAGGACAGCAGAAGAGTCCCTTCTTaGGACCTCAAGCAGAGGTTTAGCCGTGTTGTGCTCACTGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: DVAPFHVQDSRRVPS*DLKQRFSRVVLTEA Trigger: AGCTTCAGTGAGCACAACACGGCTAAACCTCTGCTTGAGGTCCAAAGAAGGGACTCTTCTGCTGTCCTGGACATGAAATGGTGCCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
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| 3UTR-3UTR TCA 90 bp | CACTTGAGCCTCCACACACCTCCTTGCACTGGTACATCCGCCAATGGCTGTCTTAGTGGACCAATCCATTaGCAAGGACAGACAATTCTC | + |
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Preference number: 2 (lower is better) Translates to: HLSLHTPPCTGTSANGCLSGPIH*QGQTIL Trigger: GAGAATTGTCTGTCCTTGTCAATGGATTGGTCCACT...AAGACAGCCATTGGCGGATGTACCAGTGCAAGGAGGTGTGTGGAGGCTCAAGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124383.2 ENSMUST00000126909.8 |
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| 3UTR-3UTR TCA 90 bp | CAATGGCTGTCTTATGTTTCGAGTGTCCCACAGCAGAACATGCTCATCATAGCTGCCAGTATATGCTCCTaGTGGGGGCTGCTCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: QWLSYVSSVPQQNMLIIAASICS*WGLLWM Trigger: CATCCAGAGCAGCCCCCATCAGGAGCATATACTGGC...AGCTATGATGAGCATGTTCTGCTGTGGGACACTCGAAACATAAGACAGCCATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124383.2 ENSMUST00000126909.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAGCTGTGCCCTCATTCACCATCAGGAGGTGCAACTGCCCCTTAGAATCACTGCTGTAGTTCAGCTGTaGCCTCATTCACCATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: FSCALIHHQEVQLPLRITAVVQL*PHSPSG Trigger: TCCTGATGGTGAATGAGGGCACAGCTGAACTACAGC...AGTGATTCTAAGGGGCAGTTGCACCTCCTGATGGTGAATGAGGGCACAGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126909.8 ENSMUST00000135339.8 |
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| 3UTR-3UTR CCA 90 bp | CAACTGCCCCTTAGAATCACTGCTAATGATCTTCAAGGGCTGTTCTCTGGCCCTCCAGAGACTGGGATGTaGCACCATTTCATGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: QLPLRITANDLQGLFSGPPETGM*HHFMSR Trigger: CCTGGACATGAAATGGTGCCACATCCCAGTCTCTGG...AGGGCCAGAGAACAGCCCTTGAAGATCATTAGCAGTGATTCTAAGGGGCAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCACATGGCCAGAGACTGGGATGTGGCACCATTTCATGTCCAGGACAGCAGAAGTGGACCAATCCATTaGCAAGGACAGACAATTCTC | + |
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Preference number: 2 (lower is better) Translates to: KHMARDWDVAPFHVQDSRSGPIH*QGQTIL Trigger: GAGAATTGTCTGTCCTTGTCAATGGATTGGTCCACT...TCTGCTGTCCTGGACATGAAATGGTGCCACATCCCAGTCTCTGGCCATGTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143253.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGTGGACCAATCCATTGACAAGGACAGACAATTCTCATCCAGGGCGAGGCAGTGGACCAATCCATTaGCAAGGACAGACAATTCTC | + |
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Preference number: 2 (lower is better) Translates to: SQWTNPLTRTDNSHPGRGSGPIH*QGQTIL Trigger: GAGAATTGTCTGTCCTTGTCAATGGATTGGTCCACT...GCCTCGCCCTGGATGAGAATTGTCTGTCCTTGTCAATGGATTGGTCCACTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000124383.2 ENSMUST00000126909.8 ENSMUST00000143253.8 ENSMUST00000153375.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTCAGAAGGCAGTCATCTCCCCCTGAATACACGAGTTCTGTCTGCCAGTAATCTGTCTGCCAGTAATTaGAAGCAGCAATCCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: LSEGSHLPLNTRVLSASNLSASN*KQQSRP Trigger: AGGCCTGGATTGCTGCTTTCAATTACTGGCAGACAG...ATTACTGGCAGACAGAACTCGTGTATTCAGGGGGAGATGACTGCCTTCTGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126909.8 ENSMUST00000135339.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGAAATTCACTGCCAAAACAGTAACACAAGAGTCCATTCTCAATGGTCAGCAGCTCCTGATGGGGGCTaGTCTGGATGCTGCACACAC | + |
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Preference number: 2 (lower is better) Translates to: LEIHCQNSNTRVHSQWSAAPDGG*SGCCTH Trigger: GTGTGTGCAGCATCCAGAGCAGCCCCCATCAGGAGC...TGCTGACCATTGAGAATGGACTCTTGTGTTACTGTTTTGGCAGTGAATTTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAAGCCTAAAAGCACATGGCCAGAGACTGGGATGTGGCACCATTTCATGTCCCTTAAGTGGTTGTTTTaGATGCTCAGGAAACCTCCC | + |
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Preference number: 2 (lower is better) Translates to: AKPKSTWPETGMWHHFMSLKWLF*MLRKPP Trigger: GGGAGGTTTCCTGAGCATCCAAAACAACCACTTAAG...GGACATGAAATGGTGCCACATCCCAGTCTCTGGCCATGTGCTTTTAGGCTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTTAGAATCACTGCTAATGATCTTCAAGGGCTGTTCTCTGGCCCTGACAGATCCAGAGACTGGGATGTaGCACCATTTCATGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PLESLLMIFKGCSLALTDPETGM*HHFMSR Trigger: CCTGGACATGAAATGGTGCCACATCCCAGTCTCTGG...ATCTGTCAGGGCCAGAGAACAGCCCTTGAAGATCATTAGCAGTGATTCTAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143253.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCCTCATTCACCATCAGGAGGTGCAACTGCCCCTTAGAATCACTGCTAATGCCCTATGGATCCACTaGCGTTTGCCAAGCCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: CALIHHQEVQLPLRITANALWIH*RLPSLK Trigger: TTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGC...ATTAGCAGTGATTCTAAGGGGCAGTTGCACCTCCTGATGGTGAATGAGGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135339.8 |
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| 3UTR-3UTR TCA 90 bp | CCCATGCAATGTCTTTTGCTAGTGAAGACAGGTGTGCCCAGCATCCTAGTGTCCAGTGGACCAATCCATTaGCAAGGACAGACAATTCTC | + |
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Preference number: 2 (lower is better) Translates to: PMQCLLLVKTGVPSILVSSGPIH*QGQTIL Trigger: GAGAATTGTCTGTCCTTGTCAATGGATTGGTCCACT...GGACACTAGGATGCTGGGCACACCTGTCTTCACTAGCAAAAGACATTGCATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124383.2 ENSMUST00000126909.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCCAAGCCTAAAAGCACATGGCCAGAGACTGGGATGTGGCACCATTTCATGTTTCACCATCAGGAGGTaGAACTGCCCCTTAGAATCA | + |
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Preference number: 2 (lower is better) Translates to: LPSLKAHGQRLGCGTISCFTIRR*NCPLES Trigger: TGATTCTAAGGGGCAGTTGCACCTCCTGATGGTGAA...ACATGAAATGGTGCCACATCCCAGTCTCTGGCCATGTGCTTTTAGGCTTGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
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| 3UTR-3UTR GCA 90 bp | CTTAGAATCACTGCTAATGATCTTCAAGGGCTGTTCTCTGGCCCTCACATTCCAGGTTTAGCCGTGTTGTaGTCACTGAAGCTGAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: LRITANDLQGLFSGPHIPGLAVL*SLKLNR Trigger: CCTGTTCAGCTTCAGTGAGCACAACACGGCTAAACC...TGGAATGTGAGGGCCAGAGAACAGCCCTTGAAGATCATTAGCAGTGATTCTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135339.8 |
||
| 3UTR-3UTR CCA 90 bp | TCATTCACCATCAGGAGGTGCAACTGCCCCTTAGAATCACTGCTAATGATCTTCCACATGGCCAGAGACTaGGATGTGGCACCATTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: SFTIRRCNCPLESLLMIFHMARD*DVAPFH Trigger: ATGAAATGGTGCCACATCCCAGTCTCTGGCCATGTG...GAAGATCATTAGCAGTGATTCTAAGGGGCAGTTGCACCTCCTGATGGTGAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
||
| 3UTR CAA 90 bp | CAGTGGCTAAGATCACGAGTCTTGACTGAGGATGAGGAGCAGTCTTaGCTGTTTTTCATGTCCTCTGTTAATGGAAGGAGAGAAGCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: QWLRSRVLTEDEEQS*LFFMSSVNGRREAF Trigger: GAAGGCTTCTCTCCTTCCATTAACAGAGGACATGAAAAACAGCAAAGACTGCTCCTCATCCTCAGTCAAGACTCGTGATCTTAGCCACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTCTGATCAAAGAACCAGGTAGGAGTGGGCTTCATGGAATGGAAAAGCCAGGATTCACCATCAGGAGGTaGAACTGCCCCTTAGAATCA | + |
|
Preference number: 2 (lower is better) Translates to: ILIKEPGRSGLHGMEKPGFTIRR*NCPLES Trigger: TGATTCTAAGGGGCAGTTGCACCTCCTGATGGTGAA...TCCTGGCTTTTCCATTCCATGAAGCCCACTCCTACCTGGTTCTTTGATCAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGCACCATTTCATGTCCAGGACAGCAGAAGAGTCCCTTCTTTGGACCTCAAGCAATTCTACTCTTAAGTaGTTGTTTTGGATGCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: WHHFMSRTAEESLLWTSSNSTLK*LFWMLR Trigger: CCTGAGCATCCAAAACAACCACTTAAGAGTAGAATT...GCTTGAGGTCCAAAGAAGGGACTCTTCTGCTGTCCTGGACATGAAATGGTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTAAAAGCACATGGCCAGAGACTGGGATGTGGCACCATTTCATGTCCAGGACAAATTCTACTCTTAAGTaGTTGTTTTGGATGCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PKSTWPETGMWHHFMSRTNSTLK*LFWMLR Trigger: CCTGAGCATCCAAAACAACCACTTAAGAGTAGAATT...TGTCCTGGACATGAAATGGTGCCACATCCCAGTCTCTGGCCATGTGCTTTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
||
| 3UTR GCA 72 bp | GGGCTGGCCAAGATGCTACTAGCTGTAGTTCAGCTGTaGCCTCATTCACCATCAGGAGGTGCAACTGCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GLAKMLLAVVQL*PHSPSGGATAP Trigger: AGGGGCAGTTGCACCTCCTGATGGTGAATGAGGGCACAGCTGAACTACAGCTAGTAGCATCTTGGCCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126909.8 ENSMUST00000135339.8 |
||
| 3UTR GCA 72 bp | AAGGAGCAGGTGGCCAGGAGGCTATTGTCAAAGCTCTaGCCACCAGAGCAGTGGCTAAGATCACGAGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: KEQVARRLLSKL*PPEQWLRSRVL Trigger: CAAGACTCGTGATCTTAGCCACTGCTCTGGTGGGCAGAGCTTTGACAATAGCCTCCTGGCCACCTGCTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| 3UTR CCA 72 bp | CACATTCCATCAGGCGGAGCAGCCCTATGGATCCACTaGCGTTTGCCAAGCCTAAAAGCACATGGCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HIPSGGAALWIH*RLPSLKAHGQR Trigger: TCTCTGGCCATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGCTGCTCCGCCTGATGGAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
||
| 3UTR CCA 72 bp | TCTGGCCCTCACATTCCATCAGGCGGAGCAGCCCTATaGATCCACTGGCGTTTGCCAAGCCTAAAAGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: SGPHIPSGGAAL*IHWRLPSLKAH Trigger: ATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGCTGCTCCGCCTGATGGAATGTGAGGGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135339.8 |
||
| 3UTR TCA 72 bp | GCGGGGCCTTCCACTTGGCGATCCATGGTTTGTTCCTaGGAATGTATTGGTGGCTCCTCTGTGACCTTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: AGPSTWRSMVCS*ECIGGSSVTFR Trigger: CCTAAAGGTCACAGAGGAGCCACCAATACATTCTCAGGAACAAACCATGGATCGCCAAGTGGAAGGCCCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| 3UTR TCA 72 bp | AATGGAAGGAGAGAAGCCTTCAGTTCAGCTCTGGTATaGGCGTTAGCGGGGCCTTCCACTTGGCGATCCATG | + |
|
Preference number: 3 (lower is better) Translates to: NGRREAFSSALV*ALAGPSTWRSM Trigger: CATGGATCGCCAAGTGGAAGGCCCCGCTAACGCTCATACCAGAGCTGAACTGAAGGCTTCTCTCCTTCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| 3UTR CCA 72 bp | GCCAAGCCTAAAAGCACATGGCCAGAGACTGGGATGTaGCACCATTTCATGTCCAGGACAGCAGAAGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: AKPKSTWPETGM*HHFMSRTAEES Trigger: GGACTCTTCTGCTGTCCTGGACATGAAATGGTGCCACATCCCAGTCTCTGGCCATGTGCTTTTAGGCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
||
| 3UTR TCA 72 bp | TCTGGCCCTGACAGATTTCCCAGTGGACCAATCCATTaGCAAGGACAGACAATTCTCATCCAGGGCGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SGPDRFPSGPIH*QGQTILIQGEA Trigger: AGCCTCGCCCTGGATGAGAATTGTCTGTCCTTGTCAATGGATTGGTCCACTGGGAAATCTGTCAGGGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126909.8 ENSMUST00000143253.8 ENSMUST00000153375.8 |
||
| 3UTR TCA 72 bp | TCTCCCCCTGACAGATTTCCCAGTGGACCAATCCATTaGCAAGGACAGACAATTCTCATCCAGGGCGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SPPDRFPSGPIH*QGQTILIQGEA Trigger: AGCCTCGCCCTGGATGAGAATTGTCTGTCCTTGTCAATGGATTGGTCCACTGGGAAATCTGTCAGGGGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124383.2 |
||
| 3UTR GCA 72 bp | GTCCCACAGCAGAACATGCTCATCATAGCTTCCAGTTaGCAGTATATGCTCCTGATGGGGGCTGCTCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VPQQNMLIIASS*QYMLLMGAALD Trigger: ATCCAGAGCAGCCCCCATCAGGAGCATATACTGGCAACTGGAAGCTATGATGAGCATGTTCTGCTGTGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124383.2 ENSMUST00000126909.8 |
||
| 3UTR CCA 72 bp | AGGAGGCTATTGTCAAAGCTCTGCCCACCAGAGCAGTaGCTAAGATCACGAGTCTTGACTGAGGATGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RRLLSKLCPPEQ*LRSRVLTEDEE Trigger: CTCCTCATCCTCAGTCAAGACTCGTGATCTTAGCCACTGCTCTGGTGGGCAGAGCTTTGACAATAGCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| 3UTR CCA 72 bp | TCCAAAGGTGGAGAACATGGTCATAAAAGGAGCAGGTaGCCAGGAGGCTATTGTCAAAGCTCTGCCCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: SKGGEHGHKRSR*PGGYCQSSAHQ Trigger: CTGGTGGGCAGAGCTTTGACAATAGCCTCCTGGCCACCTGCTCCTTTTATGACCATGTTCTCCACCTTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| 3UTR CCA 72 bp | ATGGATCCACTGGCGTTTGCCAAGCCTAAAAGCACATaGCCAGAGACTGGGATGTGGCACCATTTCATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: MDPLAFAKPKST*PETGMWHHFMS Trigger: GGACATGAAATGGTGCCACATCCCAGTCTCTGGCCATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGGAGGTGCAACTGCCCCTTAGAATCACTGCTAATGATCTTCAAGGGCTGTGGGCGAGGCTGGATATaGGCTGCAGGGTGTAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: IRRCNCPLESLLMIFKGCGRGWI*AAGCNC Trigger: ACAGTTACACCCTGCAGCCAATATCCAGCCTCGCCC...ACAGCCCTTGAAGATCATTAGCAGTGATTCTAAGGGGCAGTTGCACCTCCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126909.8 ENSMUST00000143253.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTGATCAAAGAACCAGGTAGGAGTGGGCTTCATGGAATGGAAAAGCCAGGAGGGCGAGGCTGGATATaGGCTGCAGGGTGTAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: ILIKEPGRSGLHGMEKPGGRGWI*AAGCNC Trigger: ACAGTTACACCCTGCAGCCAATATCCAGCCTCGCCC...TCCTGGCTTTTCCATTCCATGAAGCCCACTCCTACCTGGTTCTTTGATCAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| 3UTR GCA 72 bp | TCAGCTGTGCCCTCATTCACCATCAGGAGGTGCAACTaGCCCTTAGAATCACTGCTAATGATCTTCAAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SAVPSFTIRRCN*PLESLLMIFKG Trigger: GCCCTTGAAGATCATTAGCAGTGATTCTAAGGGGCAGTTGCACCTCCTGATGGTGAATGAGGGCACAGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126909.8 ENSMUST00000135339.8 |
||
| 3UTR CCA 72 bp | TGTTGTTCTCACATTCCATCAGGCGGAGCAGCCCTATaGATCCACTGGCGTTTGCCAAGCCTAAAAGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: CCSHIPSGGAAL*IHWRLPSLKAH Trigger: ATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGCTGCTCCGCCTGATGGAATGTGAGAACAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143253.8 |
||
| 3UTR CCA 72 bp | CATTTCATGTCCAGGACAGCAGAAGAGTCCCTTCTTTaGACCTCAAGCAGAGGTTTAGCCGTGTTGTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HFMSRTAEESLL*TSSRGLAVLCS Trigger: TGAGCACAACACGGCTAAACCTCTGCTTGAGGTCCAAAGAAGGGACTCTTCTGCTGTCCTGGACATGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGCGGAGCAGCCCTATGGATCCACTGGCGTTTGCCAAGCCTAAAAGCACATTCTACTCTTAAGTGGTaGTTTTGGATGCTCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SGGAALWIHWRLPSLKAHSTLKW*FWMLRK Trigger: TTTCCTGAGCATCCAAAACAACCACTTAAGAGTAGA...ATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGCTGCTCCGCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
||
| 3UTR TCA 72 bp | CTAGAGTGGTCTGCTGCTTTGACTCCCATGTCATTCTaGTCAAAGAACCAGGTAGGAGTGGGCTTCATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LEWSAALTPMSF*SKNQVGVGFME Trigger: TTCCATGAAGCCCACTCCTACCTGGTTCTTTGATCAGAATGACATGGGAGTCAAAGCAGCAGACCACTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| 3UTR GCA 72 bp | TGTAGTTCAGCTGTGCCCTCATTCACCATCAGGAGGTaGAACTGCCCCTTAGAATCACTGCTAATGATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CSSAVPSFTIRR*NCPLESLLMIF Trigger: GAAGATCATTAGCAGTGATTCTAAGGGGCAGTTGCACCTCCTGATGGTGAATGAGGGCACAGCTGAACTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126909.8 ENSMUST00000135339.8 |
||
| 3UTR CCA 72 bp | CAGTCAGCCCCATATACTAATGAGTTAGGCATTTCGTaGGATGTTAAAACAGTTATGTCCTGCTTCTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QSAPYTNELGIS*DVKTVMSCFSS Trigger: TGAGGAGAAGCAGGACATAACTGTTTTAACATCCCACGAAATGCCTAACTCATTAGTATATGGGGCTGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| 3UTR GCA 72 bp | TACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTaGCAAAACAGTAACACAAGAGTCCATTCTCAATGG | + |
|
Preference number: 3 (lower is better) Translates to: YPEHLVVELEIH*QNSNTRVHSQW Trigger: CCATTGAGAATGGACTCTTGTGTTACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGGACCAATCCATTGACAAGGACAGACAATTCTCATCCAGGGCGAGGCTGCCATCCAGTGCAGGCTaGTCCCTGGGCGCTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVDQSIDKDRQFSSRARLPSSAG*SLGARS Trigger: GCTGCGAGCGCCCAGGGACCAGCCTGCACTGGATGG...CAGCCTCGCCCTGGATGAGAATTGTCTGTCCTTGTCAATGGATTGGTCCACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGCCCTATGGATCCACTGGCGTTTGCCAAGCCTAAAAGCACATGGCCAGCAGTCCCTCTTCTCCTaGCCCTGTTGCTTCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GAALWIHWRLPSLKAHGQQSLFS*PCCFTL Trigger: GAGGGTGAAGCAACAGGGGCAGGAGAAGAGGGACTG...CTGGCCATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGCTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
||
| 3UTR CAA 72 bp | CCATCAGGCGGAGCAGCCCTATGGATCCACTGGCGTTaGCCAAGCCTAAAAGCACATGGCCAGAGACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSGGAALWIHWR*PSLKAHGQRLG Trigger: TCCCAGTCTCTGGCCATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGCTGCTCCGCCTGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
||
| CDS-3UTR GCA 90 bp | GACAGGTGTGCCCAGCATCCTAGTGTCCCAGCCTCTCAGAAGGCAGTCATCTCCAAGCTCAGTGTCTACTaGCTGCAGGACTCGCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: DRCAQHPSVPASQKAVISKLSVY*LQDSQR Trigger: ACGTTGCGAGTCCTGCAGGCAGTAGACACTGAGCTT...GGAGATGACTGCCTTCTGAGAGGCTGGGACACTAGGATGCTGGGCACACCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124383.2 ENSMUST00000126909.8 |
||
| 3UTR CAA 72 bp | AGCGTTAGCGGGGCCTTCCACTTGGCGATCCATGGTTaGTTCCTGAGAATGTATTGGTGGCTCCTCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSGAFHLAIHG*FLRMYWWLLCD Trigger: GTCACAGAGGAGCCACCAATACATTCTCAGGAACAAACCATGGATCGCCAAGTGGAAGGCCCCGCTAACGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGGATGAGGAGCAGTCTTTGCTGTTTTTCATGTCCTCTGTTAATGGAAGGACTCACTGCCATCCAGTaGAGGCTGGTCCCTGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LRMRSSLCCFSCPLLMEGLTAIQ*RLVPGR Trigger: GCGCCCAGGGACCAGCCTGCACTGGATGGCAGTGAG...TCCTTCCATTAACAGAGGACATGAAAAACAGCAAAGACTGCTCCTCATCCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGTGCAACTGCCCCTTAGAATCACTGCTAATGATCTTCAAGGGCTGTTCTTCTCCTGCCCCTGTTaGTTCACCCTCCCGGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QEVQLPLRITANDLQGLFFSCPC*FTLPVM Trigger: CATGACCGGGAGGGTGAAGCAACAGGGGCAGGAGAA...GAACAGCCCTTGAAGATCATTAGCAGTGATTCTAAGGGGCAGTTGCACCTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
||
| CDS-3UTR GCA 90 bp | ATCTTCAAGGGCTGTTCTCTGGCCCTGACAGATTTCCCAGTGGACCAATCCATTCAGTCCCTCTTCTCCTaGCCCTGTTGCTTCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IFKGCSLALTDFPVDQSIQSLFS*PCCFTL Trigger: GAGGGTGAAGCAACAGGGGCAGGAGAAGAGGGACTG...AATGGATTGGTCCACTGGGAAATCTGTCAGGGCCAGAGAACAGCCCTTGAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143253.8 |
||
| 3UTR CAA 72 bp | CTGCTCTGGATGCTGCACACACCCATGCAATGTCTTTaGCTAGTGAAGACAGGTGTGCCCAGCATCCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLWMLHTPMQCL*LVKTGVPSILV Trigger: CACTAGGATGCTGGGCACACCTGTCTTCACTAGCAAAAGACATTGCATGGGTGTGTGCAGCATCCAGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124383.2 ENSMUST00000126909.8 |
||
| CDS-3UTR GCA 90 bp | GAGACTGGGATGTGGCACCATTTCATGTCCAGGACAGCAGAAGAGTCCCTTCTTAAGCTCAGTGTCTACTaGCTGCAGGACTCGCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: ETGMWHHFMSRTAEESLLKLSVY*LQDSQR Trigger: ACGTTGCGAGTCCTGCAGGCAGTAGACACTGAGCTT...AAGAAGGGACTCTTCTGCTGTCCTGGACATGAAATGGTGCCACATCCCAGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTAGAATCACTGCTAATGATCTTCAAGGGCTGTTCTCTGGCCCTGACAGATTTCTCCTGCCCCTGTTaGTTCACCCTCCCGGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: PLESLLMIFKGCSLALTDFSCPC*FTLPVM Trigger: CATGACCGGGAGGGTGAAGCAACAGGGGCAGGAGAA...ATCTGTCAGGGCCAGAGAACAGCCCTTGAAGATCATTAGCAGTGATTCTAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143253.8 |
||
| CDS-3UTR GCA 90 bp | TGGTACATCCGCCAATGGCTGTCTTATGTTTCGAGTGTCCCACAGCAGAACATGAAGCTCAGTGTCTACTaGCTGCAGGACTCGCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: WYIRQWLSYVSSVPQQNMKLSVY*LQDSQR Trigger: ACGTTGCGAGTCCTGCAGGCAGTAGACACTGAGCTT...CATGTTCTGCTGTGGGACACTCGAAACATAAGACAGCCATTGGCGGATGTACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124383.2 ENSMUST00000126909.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGCTACTAGCTGTAGTTCAGCTGTGCCCTCATTCACCATCAGGAGGTGCAAAGCTCAGTGTCTACTaGCTGCAGGACTCGCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: KMLLAVVQLCPHSPSGGAKLSVY*LQDSQR Trigger: ACGTTGCGAGTCCTGCAGGCAGTAGACACTGAGCTT...TGCACCTCCTGATGGTGAATGAGGGCACAGCTGAACTACAGCTAGTAGCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126909.8 ENSMUST00000135339.8 |
||
| CDS-3UTR CCA 90 bp | CAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGCCATCCAGTGCAGGCTaGTCCCTGGGCGCTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QNIPRTLSCRAGNSLPKQPSSAG*SLGARS Trigger: GCTGCGAGCGCCCAGGGACCAGCCTGCACTGGATGG...CTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028351.9 ENSMUST00000126909.8 |
||
| 3UTR CAA 72 bp | TTCAGCTCTGGTATGAGCGTTAGCGGGGCCTTCCACTaGGCGATCCATGGTTTGTTCCTGAGAATGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSSGMSVSGAFH*AIHGLFLRMYW Trigger: CCAATACATTCTCAGGAACAAACCATGGATCGCCAAGTGGAAGGCCCCGCTAACGCTCATACCAGAGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| 3UTR CAA 72 bp | CTCTGCCCACCAGAGCAGTGGCTAAGATCACGAGTCTaGACTGAGGATGAGGAGCAGTCTTTGCTGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCPPEQWLRSRV*TEDEEQSLLFF Trigger: GAAAAACAGCAAAGACTGCTCCTCATCCTCAGTCAAGACTCGTGATCTTAGCCACTGCTCTGGTGGGCAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| 3UTR CAA 72 bp | CTGCAGGTACACCGCCGCAATTCTACTCTTAAGTGGTaGTTTTGGATGCTCAGGAAACCTCCCGGAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQVHRRNSTLKW*FWMLRKPPGSR Trigger: CCTACTTCCGGGAGGTTTCCTGAGCATCCAAAACAACCACTTAAGAGTAGAATTGCGGCGGTGTACCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
||
| 3UTR CAA 72 bp | CCATTTCATGTCCAGGACAGCAGAAGAGTCCCTTCTTaGGACCTCAAGCAGAGGTTTAGCCGTGTTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PFHVQDSRRVPS*DLKQRFSRVVL Trigger: GAGCACAACACGGCTAAACCTCTGCTTGAGGTCCAAAGAAGGGACTCTTCTGCTGTCCTGGACATGAAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135339.8 ENSMUST00000143253.8 |
||
| CDS-3UTR TCA 90 bp | CAGATTTCCCAGTGGACCAATCCATTGACAAGGACAGACAATTCTCATCCAGGGCGACCTAAACGAACTTaGGGCTCACTGCCATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QISQWTNPLTRTDNSHPGRPKRT*GSLPSS Trigger: ACTGGATGGCAGTGAGCCTCAAGTTCGTTTAGGTCG...CCCTGGATGAGAATTGTCTGTCCTTGTCAATGGATTGGTCCACTGGGAAATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
||
| CDS-3UTR GCA 90 bp | ATCCGCCAATGGCTGTCTTATGTTTCGAGTGTCCCACAGCAGAACATGCTCATCGGTTTAGCCGTGTTGTaGTCACTGAAGCTGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRQWLSYVSSVPQQNMLIGLAVL*SLKLNR Trigger: CCTGTTCAGCTTCAGTGAGCACAACACGGCTAAACC...GATGAGCATGTTCTGCTGTGGGACACTCGAAACATAAGACAGCCATTGGCGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
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| CDS-3UTR GCA 90 bp | GAAGAGCTGAAAGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCTCACTGCCATCCAGTaGAGGCTGGTCCCTGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EELKVKIYPEHLVVELEILTAIQ*RLVPGR Trigger: GCGCCCAGGGACCAGCCTGCACTGGATGGCAGTGAG...AATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACTTTCAGCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028351.9 ENSMUST00000126909.8 |
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| CDS-3UTR GCA 90 bp | TACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGTAACACAGCTCCTGATGGGGGCTaGTCTGGATGCTGCACACAC | + |
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Preference number: 4 (lower is better) Translates to: YPEHLVVELEIHCQNSNTAPDGG*SGCCTH Trigger: GTGTGTGCAGCATCCAGAGCAGCCCCCATCAGGAGC...TGTGTTACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR TCA 90 bp | TACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGTAACACAGCCAGTATATGCTCCTaGTGGGGGCTGCTCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: YPEHLVVELEIHCQNSNTASICS*WGLLWM Trigger: CATCCAGAGCAGCCCCCATCAGGAGCATATACTGGC...TGTGTTACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR TCA 90 bp | TACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGTAACACAGAACTGGGTGCCACTTaGGCCTCCACACACCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: YPEHLVVELEIHCQNSNTELGAT*ASTHLL Trigger: AAGGAGGTGTGTGGAGGCTCAAGTGGCACCCAGTTC...TGTGTTACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CCA 90 bp | ATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGTAACGGCGGAGCAGCCCTATaGATCCACTGGCGTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IYPEHLVVELEIHCQNSNGGAAL*IHWRLP Trigger: TGGCAAACGCCAGTGGATCCATAGGGCTGCTCCGCC...GTTACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR TCA 90 bp | TACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGTAACACAAGGAGTAGATGGTGGTaGACTGGGTGCCACTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YPEHLVVELEIHCQNSNTRSRWW*TGCHLS Trigger: GCTCAAGTGGCACCCAGTTCACCACCATCTACTCCT...TGTGTTACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR GCA 90 bp | ATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGTAACGGGGGCTGCTCTGGATaGTGCACACACCCATGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: IYPEHLVVELEIHCQNSNGGCSG*CTHPCN Trigger: ATTGCATGGGTGTGTGCAGCATCCAGAGCAGCCCCC...GTTACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR GCA 90 bp | GCTGAAAGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGGGCTGCTCTGGATGCTaGACACACCCATGCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: AESQNIPRTLSCRAGNSLGCSGC*THPCNV Trigger: GACATTGCATGGGTGTGTGCAGCATCCAGAGCAGCC...CAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACTTTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CCA 90 bp | GTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACCACACCTCCTTGCACTaGTACATCCGCCAATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VKIYPEHLVVELEIHCQNHTSLH*YIRQWL Trigger: CAGCCATTGGCGGATGTACCAGTGCAAGGAGGTGTG...GTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR TCA 90 bp | GAAGAGCTGAAAGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTATCCAGGCCTCAAAGTaGTGGGCTGGCCAAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: EELKVKIYPEHLVVELEIIQASK*WAGQDA Trigger: AGCATCTTGGCCAGCCCATCACTTTGAGGCCTGGAT...AATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACTTTCAGCTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CCA 90 bp | CAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGCCAGAGACTGGGATGTaGCACCATTTCATGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QNIPRTLSCRAGNSLPKQPETGM*HHFMSR Trigger: CCTGGACATGAAATGGTGCCACATCCCAGTCTCTGG...CTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR TCA 90 bp | GAAGAGCTGAAAGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCGACCTAAACGAACTTaGGGCTCACTGCCATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EELKVKIYPEHLVVELEIRPKRT*GSLPSS Trigger: ACTGGATGGCAGTGAGCCTCAAGTTCGTTTAGGTCG...AATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACTTTCAGCTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028351.9 ENSMUST00000126909.8 |
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| CDS-3UTR GCA 90 bp | AAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGTAAGCTCAGTGTCTACTaGCTGCAGGACTCGCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: KIYPEHLVVELEIHCQNSKLSVY*LQDSQR Trigger: ACGTTGCGAGTCCTGCAGGCAGTAGACACTGAGCTT...ACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028351.9 ENSMUST00000126909.8 |
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| CDS-3UTR GCA 90 bp | GTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACGCTGTAGTTCAGCTGTaGCCTCATTCACCATCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VKIYPEHLVVELEIHCQNAVVQL*PHSPSG Trigger: TCCTGATGGTGAATGAGGGCACAGCTGAACTACAGC...GTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR GCA 90 bp | GCTGAAAGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCTATTGTCAAAGCTCTaGCCACCAGAGCAGTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AESQNIPRTLSCRAGNSLLLSKL*PPEQWL Trigger: TAGCCACTGCTCTGGTGGGCAGAGCTTTGACAATAG...CAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACTTTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CCA 90 bp | CAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGAAGCCTAAAAGCACATaGCCAGAGACTGGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNIPRTLSCRAGNSLPKQKPKST*PETGMW Trigger: CCACATCCCAGTCTCTGGCCATGTGCTTTTAGGCTT...CTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CCA 90 bp | CAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGGTGGGCTTCATGGAATaGAAAAGCCAGGACCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QNIPRTLSCRAGNSLPKQVGFME*KSQDQS Trigger: TGACTGGTCCTGGCTTTTCCATTCCATGAAGCCCAC...CTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR TCA 90 bp | AAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGTCTGTCTGCCAGTAATTaGAAGCAGCAATCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KIYPEHLVVELEIHCQNSLSASN*KQQSRP Trigger: AGGCCTGGATTGCTGCTTTCAATTACTGGCAGACAG...ACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR GCA 90 bp | AGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAAGGTTTAGCCGTGTTGTaGTCACTGAAGCTGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQNIPRTLSCRAGNSLPKGLAVL*SLKLNR Trigger: CCTGTTCAGCTTCAGTGAGCACAACACGGCTAAACC...TTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028351.9 ENSMUST00000126909.8 |
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| CDS-3UTR GCA 90 bp | GTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACTTCACCATCAGGAGGTaGAACTGCCCCTTAGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: VKIYPEHLVVELEIHCQNFTIRR*NCPLES Trigger: TGATTCTAAGGGGCAGTTGCACCTCCTGATGGTGAA...GTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CCA 90 bp | AGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACACATGGCCAGAGACTaGGATGTGGCACCATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQNIPRTLSCRAGNSLPKHMARD*DVAPFH Trigger: ATGAAATGGTGCCACATCCCAGTCTCTGGCCATGTG...TTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CCA 90 bp | AAAGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAGCCCTATGGATCCACTaGCGTTTGCCAAGCCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KVKIYPEHLVVELEIHCQALWIH*RLPSLK Trigger: TTTTAGGCTTGGCAAACGCCAGTGGATCCATAGGGC...TTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CCA 90 bp | GAAGAGCTGAAAGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTACCTTTAGGCTAGAGTaGTCTGCTGCTTTGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EELKVKIYPEHLVVELEITFRLE*SAALTP Trigger: GGGAGTCAAAGCAGCAGACCACTCTAGCCTAAAGGT...AATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACTTTCAGCTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR TCA 90 bp | AAAGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAATCCATGGTTTGTTCCTaGGAATGTATTGGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVKIYPEHLVVELEIHCQSMVCS*ECIGGS Trigger: GGAGCCACCAATACATTCTCAGGAACAAACCATGGA...TTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR TCA 90 bp | AAAGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAGTGGACCAATCCATTaGCAAGGACAGACAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVKIYPEHLVVELEIHCQSGPIH*QGQTIL Trigger: GAGAATTGTCTGTCCTTGTCAATGGATTGGTCCACT...TTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR TCA 90 bp | AAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGTACTCCCATGTCATTCTaGTCAAAGAACCAGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KIYPEHLVVELEIHCQNSTPMSF*SKNQVG Trigger: TCCTACCTGGTTCTTTGATCAGAATGACATGGGAGT...ACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR GCA 90 bp | GCTGAAAGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGATGAGGAGCAGTCTTTaGTGTTTTTCATGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AESQNIPRTLSCRAGNSLMRSSL*CFSCPL Trigger: CAGAGGACATGAAAAACAGCAAAGACTGCTCCTCAT...CAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACTTTCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CCA 90 bp | AAAGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAATTCCTGAGAATGTATTaGTGGCTCCTCTGTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KVKIYPEHLVVELEIHCQFLRMY*WLLCDL Trigger: AAGGTCACAGAGGAGCCACCAATACATTCTCAGGAA...TTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CCA 90 bp | TACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGTAACACAGAGTTAGGCATTTCGTaGGATGTTAAAACAGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: YPEHLVVELEIHCQNSNTELGIS*DVKTVM Trigger: CATAACTGTTTTAACATCCCACGAAATGCCTAACTC...TGTGTTACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS CCA 90 bp | CAGCTGGTAGGTTCCGCAGGCCAGCAGATGCTGGTAACCTTCTACTaGGCACCATTCCACCGAGTCCGCGGTAAGCTCAGTGTCTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: QLVGSAGQQMLVTFY*APFHRVRGKLSVYC Trigger: GCAGTAGACACTGAGCTTACCGCGGACTCGGTGGAATGGTGCCCAGTAGAAGGTTACCAGCATCTGCTGGCCTGCGGAACCTACCAGCTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028351.9 ENSMUST00000124383.2 ENSMUST00000126909.8 ENSMUST00000135339.8 ENSMUST00000143253.8 ENSMUST00000153375.8 |
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| CDS-3UTR CAA 90 bp | GCTGAAAGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGGGGCGAGGCTGGATATaGGCTGCAGGGTGTAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: AESQNIPRTLSCRAGNSLGRGWI*AAGCNC Trigger: ACAGTTACACCCTGCAGCCAATATCCAGCCTCGCCC...CAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACTTTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CAA 90 bp | TACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGTAACACAAGAATCTTGAAGCCATaGTGCATGCAGGCCGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YPEHLVVELEIHCQNSNTRILKP*CMQAAR Trigger: CCTGGCGGCCTGCATGCACAATGGCTTCAAGATTCT...TGTGTTACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CAA 90 bp | CAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGGTGGCCAGGAGGCTATaGTCAAAGCTCTGCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QNIPRTLSCRAGNSLPKQVARRL*SKLCPP Trigger: TGGTGGGCAGAGCTTTGACAATAGCCTCCTGGCCAC...CTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CAA 90 bp | TACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGTAACACATGGCAGTTGAGAATCTaGAAGCCATTGTGCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: YPEHLVVELEIHCQNSNTWQLRI*KPLCMQ Trigger: CTGCATGCACAATGGCTTCAAGATTCTCAACTGCCA...TGTGTTACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CAA 90 bp | AAAGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAATGGATCCACTGGCGTTaGCCAAGCCTAAAAGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: KVKIYPEHLVVELEIHCQWIHWR*PSLKAH Trigger: ATGTGCTTTTAGGCTTGGCAAACGCCAGTGGATCCA...TTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CAA 90 bp | AAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGCCAAAACAGTATGGCCTTCTGGCAGTaGAGAATCTTGAAGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: KIYPEHLVVELEIHCQNSMAFWQ*RILKPL Trigger: CAATGGCTTCAAGATTCTCAACTGCCAGAAGGCCAT...ACTGTTTTGGCAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS-3UTR CAA 90 bp | GCTGAAAGTCAAAATATACCCAGAACACTTAGTTGTAGAGCTGGAAATTCACTGGATGAGGAGCAGTCTTaGCTGTTTTTCATGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AESQNIPRTLSCRAGNSLDEEQS*LFFMSS Trigger: AGAGGACATGAAAAACAGCAAAGACTGCTCCTCATC...CAGTGAATTTCCAGCTCTACAACTAAGTGTTCTGGGTATATTTTGACTTTCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028351.9 |
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| CDS GCA 72 bp | TCCACCGAGTCCGCGGTAAGCTCAGTGTCTACTGCCTaGAGGACTCGCAACGTCCCTGCGTGGCTACCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: STESAVSSVSTA*RTRNVPAWLPA Trigger: GGCGGGTAGCCACGCAGGGACGTTGCGAGTCCTGCAGGCAGTAGACACTGAGCTTACCGCGGACTCGGTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028351.9 ENSMUST00000124383.2 ENSMUST00000126909.8 ENSMUST00000135339.8 ENSMUST00000143253.8 ENSMUST00000153375.8 |
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| CDS GCA 72 bp | ACAGGTAGAGACGACCTAAACGAACTTGAGGCTCACTaGCATCCAGTGCAGGCTGGTCCCTGGGCGCTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: TGRDDLNELEAH*HPVQAGPWALA Trigger: TGCGAGCGCCCAGGGACCAGCCTGCACTGGATGGCAGTGAGCCTCAAGTTCGTTTAGGTCGTCTCTACCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028351.9 ENSMUST00000126909.8 |
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| CDS CCA 72 bp | GGTTCCGCAGGCCAGCAGATGCTGGTAACCTTCTACTaGGCACCATTCCACCGAGTCCGCGGTAAGCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSAGQQMLVTFY*APFHRVRGKLS Trigger: ACTGAGCTTACCGCGGACTCGGTGGAATGGTGCCCAGTAGAAGGTTACCAGCATCTGCTGGCCTGCGGAACC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000028351.9 ENSMUST00000124383.2 ENSMUST00000126909.8 ENSMUST00000135339.8 ENSMUST00000143253.8 ENSMUST00000153375.8 |
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| CDS CAA 72 bp | TCATTTCATGTCCAGGACAGCAGAAGAGTCCCTTCTTaGGACCTCAAGCAGAGGTTTAGCCGTGTTGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SFHVQDSRRVPS*DLKQRFSRVVL Trigger: GAGCACAACACGGCTAAACCTCTGCTTGAGGTCCAAAGAAGGGACTCTTCTGCTGTCCTGGACATGAAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126909.8 |
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