Pregenerated sensors for DPH6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057147Ensembl transcript IDs: ENSMUST00000028640.14, ENSMUST00000055144.8, ENSMUST00000102542.10
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCAGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTaGCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: LSRPGWPRTQKSTCL*LPSAGIKGVHHCLA Trigger: AGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR GCA 90 bp | AACGCACTCAGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTaGCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGC | + |
|
Preference number: 1 (lower is better) Translates to: NALSRPGWPRTQKST*LCLPSAGIKGVHHC Trigger: GCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACTGAGTGCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR GCA 90 bp | AGTCAGAGGATCAGGGAGTTTGCTTCTTTCAGGAGTCTCCGGAGCTaGACCCATGAAGTCTCATCAACATGGCTCCTGAAACATGGTCTG | + |
|
Preference number: 1 (lower is better) Translates to: SQRIREFASFRSLRS*THEVSSTWLLKHGL Trigger: CAGACCATGTTTCAGGAGCCATGTTGATGAGACTTCATGGGTGCAGCTCCGGAGACTCCTGAAAGAAGCAAACTCCCTGATCCTCTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR GCA 90 bp | AAAGACATATATACATGCACACACAAATGCGCACAGAAATGCGCGTaGGCGCGCACACACACACAGAGAGAAAAAGAGAGAAAGAGACGT | + |
|
Preference number: 1 (lower is better) Translates to: KDIYTCTHKCAQKCA*ARTHTQREKERKRR Trigger: ACGTCTCTTTCTCTCTTTTTCTCTCTGTGTGTGTGTGCGCGCGCACGCGCATTTCTGTGCGCATTTGTGTGTGCATGTATATATGTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR CCA 90 bp | GCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTaGCTACGCATGATTCTTAAGACAGTAAAACTATTGTGTTATAGG | + |
|
Preference number: 1 (lower is better) Translates to: ASASQVLGLKVYTTA*LRMILKTVKLLCYR Trigger: CCTATAACACAATAGTTTTACTGTCTTAAGAATCATGCGTAGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR TCA 90 bp | TCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTACGCATGGGAGATAGAGGATGGTaGGAGTCAGAGGATCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SASQVLGLKVYTTAWLRMGDRGW*ESEDQG Trigger: TCCCTGATCCTCTGACTCTCACCATCCTCTATCTCC...CATGCGTAGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR GCA 90 bp | TCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTACGCATGACACAATACAGGCCATaGAATACAGTCTGGGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SASQVLGLKVYTTAWLRMTQYRP*NTVWAG Trigger: GCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGT...CATGCGTAGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CCA 90 bp | TGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTACGGAAAAGGAGTGTGTGTaGGGGTGCGTATATTGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: CLCLPSAGIKGVHHCLATEKECV*GCVYCR Trigger: CCTACAATATACGCACCCCCACACACACTCCTTTTC...CGTAGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CCA 90 bp | TGGAACGCACTCAGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCCCTCTTTTCGTGACATaGGATGTGGAAGAGAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: WNALSRPGWPRTQKSTCLPLFVT*DVEERE Trigger: TTCCCTCTCTTCCACATCCCATGTCACGAAAAGAGG...GAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACTGAGTGCGTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CCA 90 bp | ACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTCCTCTTTTCGTGACATaGGATGTGGAAGAGAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: TCLCLPSAGIKGVHHCLAPLFVT*DVEERE Trigger: TTCCCTCTCTTCCACATCCCATGTCACGAAAAGAGG...AGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CCA 90 bp | TGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTACGCAGACAGTGCTCCAATaGAACAAAACACATACATGG | + |
|
Preference number: 2 (lower is better) Translates to: CLCLPSAGIKGVHHCLATQTVLQ*NKTHTW Trigger: CCATGTATGTGTTTTGTTCCATTGGAGCACTGTCTG...CGTAGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CCA 90 bp | ACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTCAGACAGTGCTCCAATaGAACAAAACACATACATGG | + |
|
Preference number: 2 (lower is better) Translates to: TCLCLPSAGIKGVHHCLAQTVLQ*NKTHTW Trigger: CCATGTATGTGTTTTGTTCCATTGGAGCACTGTCTG...AGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTACGCATGACTGTGTCCATAAATTaGAAAAGGAGTGTGTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SASQVLGLKVYTTAWLRMTVSIN*KRSVCG Trigger: CCCACACACACTCCTTTTCCAATTTATGGACACAGT...CATGCGTAGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR TCA 90 bp | ACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTCAGAGAAGAGTTCACTaGAATTCTTCCAGTTATTCA | + |
|
Preference number: 2 (lower is better) Translates to: TCLCLPSAGIKGVHHCLAQRRVH*NSSSYS Trigger: TGAATAACTGGAAGAATTTCAGTGAACTCTTCTCTG...AGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CCA 90 bp | TGCACCCATGAAGTCTCATCAACATGGCTCCTGAAACATGGTCTGAACAAGGAGGAAAAGGAGTGTGTGTaGGGGTGCGTATATTGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: CTHEVSSTWLLKHGLNKEEKECV*GCVYCR Trigger: CCTACAATATACGCACCCCCACACACACTCCTTTTC...CTCCTTGTTCAGACCATGTTTCAGGAGCCATGTTGATGAGACTTCATGGGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CCA 90 bp | ACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTTTATCCAATAGCAAATaGTCAACCCTGAAAACACAA | + |
|
Preference number: 2 (lower is better) Translates to: TCLCLPSAGIKGVHHCLALSNSK*STLKTQ Trigger: TTGTGTTTTCAGGGTTGACCATTTGCTATTGGATAA...AGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTACGCATGAACAAAACACATACATaGGCACTTTGTGCTTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: SASQVLGLKVYTTAWLRMNKTHT*ALCAFP Trigger: TGGAAAAGCACAAAGTGCCCATGTATGTGTTTTGTT...CATGCGTAGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR GCA 90 bp | TATAAGGCAGACAGTGCTCCAATGGAACAAAACACATACATGGGCACTTTGTGCACACAATACAGGCCATaGAATACAGTCTGGGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: YKADSAPMEQNTYMGTLCTQYRP*NTVWAG Trigger: GCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGT...GCACAAAGTGCCCATGTATGTGTTTTGTTCCATTGGAGCACTGTCTGCCTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTCATGAGGGAAGAGCACACCAACTGGTTATCCAATAGCAAATGGTCAACCACACAATACAGGCCATaGAATACAGTCTGGGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: KFMREEHTNWLSNSKWSTTQYRP*NTVWAG Trigger: GCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGT...GGTTGACCATTTGCTATTGGATAACCAGTTGGTGTGCTCTTCCCTCATGAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CCA 90 bp | ATGGTCAACCCTGAAAACACAATACAGGCCATGCAATACAGTCTGGGCAGGCTGACTGTGTCCATAAATTaGAAAAGGAGTGTGTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: MVNPENTIQAMQYSLGRLTVSIN*KRSVCG Trigger: CCCACACACACTCCTTTTCCAATTTATGGACACAGT...CAGCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGTTGACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTGAAAACACAATACAGGCCATGCAATACAGTCTGGGCAGGCTGTATTTATGAAAAGGAGTGTGTGTaGGGGTGCGTATATTGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: TLKTQYRPCNTVWAGCIYEKECV*GCVYCR Trigger: CCTACAATATACGCACCCCCACACACACTCCTTTTC...ATAAATACAGCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CCA 90 bp | TATAAGGCAGACAGTGCTCCAATGGAACAAAACACATACATGGGCACTTTGTGCCCTCTTTTCGTGACATaGGATGTGGAAGAGAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: YKADSAPMEQNTYMGTLCPLFVT*DVEERE Trigger: TTCCCTCTCTTCCACATCCCATGTCACGAAAAGAGG...GCACAAAGTGCCCATGTATGTGTTTTGTTCCATTGGAGCACTGTCTGCCTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR GCA 90 bp | AATAGCAAATGGTCAACCCTGAAAACACAATACAGGCCATGCAATACAGTCTGGGAGTGTGTGTGGGGGTaGGTATATTGTAGGGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: NSKWSTLKTQYRPCNTVWECVWG*VYCRVL Trigger: CAAAACCCTACAATATACGCACCCCCACACACACTC...CCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGTTGACCATTTGCTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR GCA 90 bp | AAACATGGTCTGAACAAGGAGGGTATTGACAGACATGCTAAAGTAGATGAGGAAGAGTGTGTGTGGGGGTaGGTATATTGTAGGGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: KHGLNKEGIDRHAKVDEEECVWG*VYCRVL Trigger: CAAAACCCTACAATATACGCACCCCCACACACACTC...TTCCTCATCTACTTTAGCATGTCTGTCAATACCCTCCTTGTTCAGACCATGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR TCA 90 bp | ACCCTGAAAACACAATACAGGCCATGCAATACAGTCTGGGCAGGCTGTATTTATCAGAGAAGAGTTCACTaGAATTCTTCCAGTTATTCA | + |
|
Preference number: 2 (lower is better) Translates to: TLKTQYRPCNTVWAGCIYQRRVH*NSSSYS Trigger: TGAATAACTGGAAGAATTTCAGTGAACTCTTCTCTG...ATAAATACAGCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR TCA 90 bp | TATAAGGCAGACAGTGCTCCAATGGAACAAAACACATACATGGGCACTTTGTGCCAGAGAAGAGTTCACTaGAATTCTTCCAGTTATTCA | + |
|
Preference number: 2 (lower is better) Translates to: YKADSAPMEQNTYMGTLCQRRVH*NSSSYS Trigger: TGAATAACTGGAAGAATTTCAGTGAACTCTTCTCTG...GCACAAAGTGCCCATGTATGTGTTTTGTTCCATTGGAGCACTGTCTGCCTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CCA 90 bp | TATAAGGCAGACAGTGCTCCAATGGAACAAAACACATACATGGGCACTTTGTGCTTATCCAATAGCAAATaGTCAACCCTGAAAACACAA | + |
|
Preference number: 2 (lower is better) Translates to: YKADSAPMEQNTYMGTLCLSNSK*STLKTQ Trigger: TTGTGTTTTCAGGGTTGACCATTTGCTATTGGATAA...GCACAAAGTGCCCATGTATGTGTTTTGTTCCATTGGAGCACTGTCTGCCTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTaGCTCCCAAGTGCTGGGATTAAAGGTGTACACCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGWPRTQKSTCL*LPSAGIKGVHH Trigger: GTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CAA 90 bp | TGGAACGCACTCAGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCGTATATTGTAGGGTTTaGAGGAAAGTACGGGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: WNALSRPGWPRTQKSTCLVYCRV*RKVRVV Trigger: TACCACCCGTACTTTCCTCAAAACCCTACAATATAC...GAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACTGAGTGCGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CAA 90 bp | TGGAACGCACTCAGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCAACTGTGTCCATAAATaGGAAAAGGAGTGTGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: WNALSRPGWPRTQKSTCLNCVHK*EKECVW Trigger: CCACACACACTCCTTTTCCAATTTATGGACACAGTT...GAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACTGAGTGCGTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR CCA 72 bp | AGTCTCCGGAGCTGCACCCATGAAGTCTCATCAACATaGCTCCTGAAACATGGTCTGAACAAGGAGGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: SLRSCTHEVSST*LLKHGLNKEGI Trigger: AATACCCTCCTTGTTCAGACCATGTTTCAGGAGCCATGTTGATGAGACTTCATGGGTGCAGCTCCGGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTACGCATGACATACATGGGCACTTaGTGCTTTTCCATTCAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SASQVLGLKVYTTAWLRMTYMGT*CFSIQF Trigger: AAACTGAATGGAAAAGCACAAAGTGCCCATGTATGT...CATGCGTAGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CAA 90 bp | TATAAGGCAGACAGTGCTCCAATGGAACAAAACACATACATGGGCACTTTGTGCAGAGGATCAGGGAGTTaGCTTCTTTCAGGAGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: YKADSAPMEQNTYMGTLCRGSGS*LLSGVS Trigger: GGAGACTCCTGAAAGAAGCAAACTCCCTGATCCTCT...GCACAAAGTGCCCATGTATGTGTTTTGTTCCATTGGAGCACTGTCTGCCTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CAA 90 bp | AACGAGCTTGATTGTCTAGATCAGAGTCTTCTTTTTCTGATGCCTCTTTTCGTGAGAGGATCAGGGAGTTaGCTTCTTTCAGGAGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: NELDCLDQSLLFLMPLFVRGSGS*LLSGVS Trigger: GGAGACTCCTGAAAGAAGCAAACTCCCTGATCCTCT...CACGAAAAGAGGCATCAGAAAAAGAAGACTCTGATCTAGACAATCAAGCTCGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR TCA 72 bp | ACACCAACTGGTTATCCAATAGCAAATGGTCAACCCTaGAAACACAATACAGGCCATGCAATACAGTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TPTGYPIANGQP*KHNTGHAIQSG Trigger: CCCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGTTGACCATTTGCTATTGGATAACCAGTTGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR CCA 72 bp | AGGGAAGAGCACACCAACTGGTTATCCAATAGCAAATaGTCAACCCTGAAAACACAATACAGGCCATGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: REEHTNWLSNSK*STLKTQYRPCN Trigger: ATTGCATGGCCTGTATTGTGTTTTCAGGGTTGACCATTTGCTATTGGATAACCAGTTGGTGTGCTCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR CCA 72 bp | TCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTaGCTACGCATGATTCTTAAGACAGTAAAACTATTG | + |
|
Preference number: 3 (lower is better) Translates to: SQVLGLKVYTTA*LRMILKTVKLL Trigger: CAATAGTTTTACTGTCTTAAGAATCATGCGTAGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CAA 90 bp | TATAAGGCAGACAGTGCTCCAATGGAACAAAACACATACATGGGCACTTTGTGCGTATATTGTAGGGTTTaGAGGAAAGTACGGGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: YKADSAPMEQNTYMGTLCVYCRV*RKVRVV Trigger: TACCACCCGTACTTTCCTCAAAACCCTACAATATAC...GCACAAAGTGCCCATGTATGTGTTTTGTTCCATTGGAGCACTGTCTGCCTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CAA 90 bp | AATAGCAAATGGTCAACCCTGAAAACACAATACAGGCCATGCAATACAGTCTGGGTATATTGTAGGGTTTaGAGGAAAGTACGGGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: NSKWSTLKTQYRPCNTVWVYCRV*RKVRVV Trigger: TACCACCCGTACTTTCCTCAAAACCCTACAATATAC...CCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGTTGACCATTTGCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTGCTCCAATGGAACAAAACACATACATGGGCACTTTGTGCTTTTCCATTCAACTGTGTCCATAAATaGGAAAAGGAGTGTGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TVLQWNKTHTWALCAFPFNCVHK*EKECVW Trigger: CCACACACACTCCTTTTCCAATTTATGGACACAGTT...GAATGGAAAAGCACAAAGTGCCCATGTATGTGTTTTGTTCCATTGGAGCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR GCA 72 bp | AGCAAATGGTCAACCCTGAAAACACAATACAGGCCATaGAATACAGTCTGGGCAGGCTGTATTTATGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: SKWSTLKTQYRP*NTVWAGCIYVF Trigger: AAATACATAAATACAGCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGTTGACCATTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR CCA 72 bp | ACCCTGAAAACACAATACAGGCCATGCAATACAGTCTaGGCAGGCTGTATTTATGTATTTAGGAATGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TLKTQYRPCNTV*AGCIYVFRNVC Trigger: ACACACATTCCTAAATACATAAATACAGCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTACGCAGGGGCAGCGCCATTaGTTCAGCATACAAGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLCLPSAGIKGVHHCLATQGQRH*FSIQVN Trigger: ATTGACTTGTATGCTGAAGCAATGGCGCTGCCCCTG...CGTAGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR TCA 90 bp | TGCACCCATGAAGTCTCATCAACATGGCTCCTGAAACATGGTCTGAACAAGGAGCCAAGCTCCTTCCTCTaGTGGCTCTGCGATACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CTHEVSSTWLLKHGLNKEPSSFL*WLCDTG Trigger: CCCTGTATCGCAGAGCCATCAGAGGAAGGAGCTTGG...CTCCTTGTTCAGACCATGTTTCAGGAGCCATGTTGATGAGACTTCATGGGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR TCA 90 bp | ACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTGTGCATGACTGCTTCTaGAGAGTCCCTCTAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TCLCLPSAGIKGVHHCLAVHDCF*RVPLKD Trigger: ATCTTTTAGAGGGACTCTTCAGAAGCAGTCATGCAC...AGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028640.14 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTACGAGGGTTTTCCCAAGATaGTTATCAGGATCTAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLCLPSAGIKGVHHCLATRVFPR*LSGSKP Trigger: GGGCTTAGATCCTGATAAGCATCTTGGGAAAACCCT...CGTAGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR GCA 90 bp | TCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTACGCATGAGGGTTTTCCCAAGATaGTTATCAGGATCTAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SASQVLGLKVYTTAWLRMRVFPR*LSGSKP Trigger: GGGCTTAGATCCTGATAAGCATCTTGGGAAAACCCT...CATGCGTAGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR TCA 90 bp | ACCCTGAAAACACAATACAGGCCATGCAATACAGTCTGGGCAGGCTGTATTTATCCAAGCTCCTTCCTCTaGTGGCTCTGCGATACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLKTQYRPCNTVWAGCIYPSSFL*WLCDTG Trigger: CCCTGTATCGCAGAGCCATCAGAGGAAGGAGCTTGG...ATAAATACAGCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR TCA 90 bp | AAACATGGTCTGAACAAGGAGGGTATTGACAGACATGCTAAAGTAGATGAGGAACCAAGCTCCTTCCTCTaGTGGCTCTGCGATACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KHGLNKEGIDRHAKVDEEPSSFL*WLCDTG Trigger: CCCTGTATCGCAGAGCCATCAGAGGAAGGAGCTTGG...TTCCTCATCTACTTTAGCATGTCTGTCAATACCCTCCTTGTTCAGACCATGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR GCA 90 bp | TATAAGGCAGACAGTGCTCCAATGGAACAAAACACATACATGGGCACTTTGTGCCAGGGGCAGCGCCATTaGTTCAGCATACAAGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YKADSAPMEQNTYMGTLCQGQRH*FSIQVN Trigger: ATTGACTTGTATGCTGAAGCAATGGCGCTGCCCCTG...GCACAAAGTGCCCATGTATGTGTTTTGTTCCATTGGAGCACTGTCTGCCTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR GCA 90 bp | ACCCTGAAAACACAATACAGGCCATGCAATACAGTCTGGGCAGGCTGTATTTATGATGCCCCTCAGCAATaGACTGCATCATGTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLKTQYRPCNTVWAGCIYDAPQQ*TASCCN Trigger: GTTACAACATGATGCAGTGCATTGCTGAGGGGCATC...ATAAATACAGCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CCA 90 bp | ATGGTCAACCCTGAAAACACAATACAGGCCATGCAATACAGTCTGGGCAGGCTGTCATCTGACTCCACTTaGTTTTCATCTGGTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MVNPENTIQAMQYSLGRLSSDST*FSSGLR Trigger: TCTAAGACCAGATGAAAACCAAGTGGAGTCAGATGA...CAGCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGTTGACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTCATGAGGGAAGAGCACACCAACTGGTTATCCAATAGCAAATGGTCAACCCAGCATACAAGTCAATaGCATGGTGACCCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KFMREEHTNWLSNSKWSTQHTSQ*HGDPLS Trigger: AGACAGTGGGTCACCATGCCATTGACTTGTATGCTG...GGTTGACCATTTGCTATTGGATAACCAGTTGGTGTGCTCTTCCCTCATGAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CCA 90 bp | ACCCTGAAAACACAATACAGGCCATGCAATACAGTCTGGGCAGGCTGTATTTATCAGCATACAAGTCAATaGCATGGTGACCCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLKTQYRPCNTVWAGCIYQHTSQ*HGDPLS Trigger: AGACAGTGGGTCACCATGCCATTGACTTGTATGCTG...ATAAATACAGCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CCA 90 bp | TATAAGGCAGACAGTGCTCCAATGGAACAAAACACATACATGGGCACTTTGTGCCAGCATACAAGTCAATaGCATGGTGACCCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YKADSAPMEQNTYMGTLCQHTSQ*HGDPLS Trigger: AGACAGTGGGTCACCATGCCATTGACTTGTATGCTG...GCACAAAGTGCCCATGTATGTGTTTTGTTCCATTGGAGCACTGTCTGCCTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR TCA 90 bp | GGTATTGACAGACATGCTAAAGTAGATGAGGAAGTTCATGAGGGAAGAGCACACGAGTATAGCACCTACTaGTACCCCTTCGATTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GIDRHAKVDEEVHEGRAHEYSTY*YPFDFF Trigger: GAAGAAATCGAAGGGGTATCAGTAGGTGCTATACTC...GTGTGCTCTTCCCTCATGAACTTCCTCATCTACTTTAGCATGTCTGTCAATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR TCA 90 bp | AAGTTCATGAGGGAAGAGCACACCAACTGGTTATCCAATAGCAAATGGTCAACCGAGTATAGCACCTACTaGTACCCCTTCGATTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KFMREEHTNWLSNSKWSTEYSTY*YPFDFF Trigger: GAAGAAATCGAAGGGGTATCAGTAGGTGCTATACTC...GGTTGACCATTTGCTATTGGATAACCAGTTGGTGTGCTCTTCCCTCATGAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR TCA 90 bp | ATGGTCAACCCTGAAAACACAATACAGGCCATGCAATACAGTCTGGGCAGGCTGCTAAAGGCTGGAGATTaGGTCGTTTACATACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: MVNPENTIQAMQYSLGRLLKAGD*VVYIHF Trigger: AAAATGTATGTAAACGACTCAATCTCCAGCCTTTAG...CAGCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGTTGACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR TCA 90 bp | GGTATTGACAGACATGCTAAAGTAGATGAGGAAGTTCATGAGGGAAGAGCACACGGAATCTCTGCCATCTaGGCTTTACTCACTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GIDRHAKVDEEVHEGRAHGISAI*ALLTFS Trigger: AGAGAAAGTGAGTAAAGCTCAGATGGCAGAGATTCC...GTGTGCTCTTCCCTCATGAACTTCCTCATCTACTTTAGCATGTCTGTCAATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055144.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTGCTCCAATGGAACAAAACACATACATGGGCACTTTGTGCTTTTCCATTCGATGCCCCTCAGCAATaGACTGCATCATGTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVLQWNKTHTWALCAFPFDAPQQ*TASCCN Trigger: GTTACAACATGATGCAGTGCATTGCTGAGGGGCATC...GAATGGAAAAGCACAAAGTGCCCATGTATGTGTTTTGTTCCATTGGAGCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR GCA 90 bp | ACCCTGAAAACACAATACAGGCCATGCAATACAGTCTGGGCAGGCTGTATTTATAGGGTTTTCCCAAGATaGTTATCAGGATCTAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLKTQYRPCNTVWAGCIYRVFPR*LSGSKP Trigger: GGGCTTAGATCCTGATAAGCATCTTGGGAAAACCCT...ATAAATACAGCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CCA 90 bp | AATAGCAAATGGTCAACCCTGAAAACACAATACAGGCCATGCAATACAGTCTGGCCTTCTCCACACACGTaGACACCGTACTTCTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NSKWSTLKTQYRPCNTVWPSPHT*TPYFLE Trigger: TTCTAAGAAGTACGGTGTCCACGTGTGTGGAGAAGG...CCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGTTGACCATTTGCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR GCA 90 bp | AAACATGGTCTGAACAAGGAGGGTATTGACAGACATGCTAAAGTAGATGAGGAAGATGCCCCTCAGCAATaGACTGCATCATGTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KHGLNKEGIDRHAKVDEEDAPQQ*TASCCN Trigger: GTTACAACATGATGCAGTGCATTGCTGAGGGGCATC...TTCCTCATCTACTTTAGCATGTCTGTCAATACCCTCCTTGTTCAGACCATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR TCA 90 bp | AATAGCAAATGGTCAACCCTGAAAACACAATACAGGCCATGCAATACAGTCTGGCTAAAGGCTGGAGATTaGGTCGTTTACATACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NSKWSTLKTQYRPCNTVWLKAGD*VVYIHF Trigger: AAAATGTATGTAAACGACTCAATCTCCAGCCTTTAG...CCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGTTGACCATTTGCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CCA 90 bp | AAACATGGTCTGAACAAGGAGGGTATTGACAGACATGCTAAAGTAGATGAGGAATCATCTGACTCCACTTaGTTTTCATCTGGTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KHGLNKEGIDRHAKVDEESSDST*FSSGLR Trigger: TCTAAGACCAGATGAAAACCAAGTGGAGTCAGATGA...TTCCTCATCTACTTTAGCATGTCTGTCAATACCCTCCTTGTTCAGACCATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| 3UTR CAA 72 bp | GTGAGGGAATCGAAACACATATTAGTAAGTGAAGGATaGCTACCACACAATATTCTGAAGAATGCAAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: VRESKHILVSEG*LPHNILKNAKL Trigger: TAGTTTTGCATTCTTCAGAATATTGTGTGGTAGCAATCCTTCACTTACTAATATGTGTTTCGATTCCCTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028640.14 ENSMUST00000102542.10 |
||
| CDS TCA 90 bp | CAGGTACTGACGACACCTCTCACTCGCCTTGGAATCTCTGCCATCTaGGCTTTACTCACTTTCTCTTCCAAGTGCAGCCGGGAGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QVLTTPLTRLGISAI*ALLTFSSKCSRESR Trigger: GCGGCTCTCCCGGCTGCACTTGGAAGAGAAAGTGAGTAAAGCTCAGATGGCAGAGATTCCAAGGCGAGTGAGAGGTGTCGTCAGTACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055144.8 |
||
| CDS GCA 90 bp | CAAGCTCCTTCCTCTGATGGCTCTGCGATACAGGGGCAGCGCCATTaGTTCAGCATACAAGTCAATGGCATGGTGACCCACTGTCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: QAPSSDGSAIQGQRH*FSIQVNGMVTHCLI Trigger: TATCAGACAGTGGGTCACCATGCCATTGACTTGTATGCTGAAGCAATGGCGCTGCCCCTGTATCGCAGAGCCATCAGAGGAAGGAGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS GCA 90 bp | TCATCCGCAGGTACTGACGACACCTCTCACTCGCCTTGGAATCTCTaGCATCTGAGCTTTACTCACTTTCTCTTCCAAGTGCAGCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSAGTDDTSHSPWNL*HLSFTHFLFQVQPG Trigger: TCCCGGCTGCACTTGGAAGAGAAAGTGAGTAAAGCTCAGATGGCAGAGATTCCAAGGCGAGTGAGAGGTGTCGTCAGTACCTGCGGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055144.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTACGCATGCTCGTCACCTTCACATaGCGTATAAACTCTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SASQVLGLKVYTTAWLRMLVTFT*RINSSC Trigger: ACAGGAAGAGTTTATACGCAATGTGAAGGTGACGAG...CATGCGTAGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CAA 90 bp | TGGAACGCACTCAGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCCCCAAAGCTGCTACTTaGATGATAATGGCCTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: WNALSRPGWPRTQKSTCLPKAAT*MIMALI Trigger: TATCAAGGCCATTATCATCAAAGTAGCAGCTTTGGG...GAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACTGAGTGCGTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CAA 90 bp | ACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTACACCACTGCCTGGCTACAACAATCTTCTTCTaGAATAGAGGGCAGTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TCLCLPSAGIKGVHHCLATTIFF*NRGQSN Trigger: GTTGGACTGCCCTCTATTCAAGAAGAAGATTGTTGT...AGCCAGGCAGTGGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CAA 90 bp | TGCACCCATGAAGTCTCATCAACATGGCTCCTGAAACATGGTCTGAACAAGGAGCACCTCTCACTCGCCTaGGAATCTCTGCCATCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CTHEVSSTWLLKHGLNKEHLSLA*ESLPSE Trigger: CTCAGATGGCAGAGATTCCAAGGCGAGTGAGAGGTG...CTCCTTGTTCAGACCATGTTTCAGGAGCCATGTTGATGAGACTTCATGGGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055144.8 |
||
| CDS CCA 90 bp | CTCTGCGATACAGGGGCAGCGCCATTGCTTCAGCATACAAGTCAATaGCATGGTGACCCACTGTCTGATACATATAGCTATCCAGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LCDTGAAPLLQHTSQ*HGDPLSDTYSYPVH Trigger: ATGAACTGGATAGCTATATGTATCAGACAGTGGGTCACCATGCCATTGACTTGTATGCTGAAGCAATGGCGCTGCCCCTGTATCGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCATAAATTGGAAAAGGAGTGTGTGTGGGGGTGCGTATATTGTAGGGTTACAGGGGCAGCGCCATaGCTTCAGCATACAAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CVHKLEKECVWGCVYCRVTGAAP*LQHTSQ Trigger: TTGACTTGTATGCTGAAGCAATGGCGCTGCCCCTGT...AACCCTACAATATACGCACCCCCACACACACTCCTTTTCCAATTTATGGACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CAA 90 bp | AAGTTCATGAGGGAAGAGCACACCAACTGGTTATCCAATAGCAAATGGTCAACCACAGGGGCAGCGCCATaGCTTCAGCATACAAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: KFMREEHTNWLSNSKWSTTGAAP*LQHTSQ Trigger: TTGACTTGTATGCTGAAGCAATGGCGCTGCCCCTGT...GGTTGACCATTTGCTATTGGATAACCAGTTGGTGTGCTCTTCCCTCATGAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CAA 90 bp | ACAGTGCTCCAATGGAACAAAACACATACATGGGCACTTTGTGCTTTTCCATTCACAGGGGCAGCGCCATaGCTTCAGCATACAAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TVLQWNKTHTWALCAFPFTGAAP*LQHTSQ Trigger: TTGACTTGTATGCTGAAGCAATGGCGCTGCCCCTGT...GAATGGAAAAGCACAAAGTGCCCATGTATGTGTTTTGTTCCATTGGAGCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CAA 90 bp | AAGTTCATGAGGGAAGAGCACACCAACTGGTTATCCAATAGCAAATGGTCAACCCTCGTCACCTTCACATaGCGTATAAACTCTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KFMREEHTNWLSNSKWSTLVTFT*RINSSC Trigger: ACAGGAAGAGTTTATACGCAATGTGAAGGTGACGAG...GGTTGACCATTTGCTATTGGATAACCAGTTGGTGTGCTCTTCCCTCATGAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CAA 90 bp | TGCACCCATGAAGTCTCATCAACATGGCTCCTGAAACATGGTCTGAACAAGGAGGCTAAAGGCTGGAGATaGAGTCGTTTACATACATTT | + |
|
Preference number: 5 (lower is better) Translates to: CTHEVSSTWLLKHGLNKEAKGWR*SRLHTF Trigger: AAATGTATGTAAACGACTCAATCTCCAGCCTTTAGC...CTCCTTGTTCAGACCATGTTTCAGGAGCCATGTTGATGAGACTTCATGGGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCATAAATTGGAAAAGGAGTGTGTGTGGGGGTGCGTATATTGTAGGGTTCCCAAAGCTGCTACTTaGATGATAATGGCCTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: CVHKLEKECVWGCVYCRVPKAAT*MIMALI Trigger: TATCAAGGCCATTATCATCAAAGTAGCAGCTTTGGG...AACCCTACAATATACGCACCCCCACACACACTCCTTTTCCAATTTATGGACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CAA 90 bp | AAGTTCATGAGGGAAGAGCACACCAACTGGTTATCCAATAGCAAATGGTCAACCCCCAAAGCTGCTACTTaGATGATAATGGCCTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: KFMREEHTNWLSNSKWSTPKAAT*MIMALI Trigger: TATCAAGGCCATTATCATCAAAGTAGCAGCTTTGGG...GGTTGACCATTTGCTATTGGATAACCAGTTGGTGTGCTCTTCCCTCATGAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CAA 90 bp | ACCCTGAAAACACAATACAGGCCATGCAATACAGTCTGGGCAGGCTGTATTTATACAACAATCTTCTTCTaGAATAGAGGGCAGTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: TLKTQYRPCNTVWAGCIYTTIFF*NRGQSN Trigger: GTTGGACTGCCCTCTATTCAAGAAGAAGATTGTTGT...ATAAATACAGCCTGCCCAGACTGTATTGCATGGCCTGTATTGTGTTTTCAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS-3UTR CAA 90 bp | AAACATGGTCTGAACAAGGAGGGTATTGACAGACATGCTAAAGTAGATGAGGAAGCTAAAGGCTGGAGATaGAGTCGTTTACATACATTT | + |
|
Preference number: 5 (lower is better) Translates to: KHGLNKEGIDRHAKVDEEAKGWR*SRLHTF Trigger: AAATGTATGTAAACGACTCAATCTCCAGCCTTTAGC...TTCCTCATCTACTTTAGCATGTCTGTCAATACCCTCCTTGTTCAGACCATGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS GCA 72 bp | TCCTCTGATGGCTCTGCGATACAGGGGCAGCGCCATTaGTTCAGCATACAAGTCAATGGCATGGTGACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSDGSAIQGQRH*FSIQVNGMVTH Trigger: GTGGGTCACCATGCCATTGACTTGTATGCTGAAGCAATGGCGCTGCCCCTGTATCGCAGAGCCATCAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS TCA 72 bp | ACGACACCTCTCACTCGCCTTGGAATCTCTGCCATCTaGGCTTTACTCACTTTCTCTTCCAAGTGCAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TTPLTRLGISAI*ALLTFSSKCSR Trigger: CCGGCTGCACTTGGAAGAGAAAGTGAGTAAAGCTCAGATGGCAGAGATTCCAAGGCGAGTGAGAGGTGTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055144.8 |
||
| CDS TCA 72 bp | GATAAGCCACAGGTGCGAATGCATCCGCTGAGTGCATaGCTGCTTCTGAAGAGTCCACAACAATCTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: DKPQVRMHPLSA*LLLKSPQQSSS Trigger: AGAAGAAGATTGTTGTGGACTCTTCAGAAGCAGTCATGCACTCAGCGGATGCATTCGCACCTGTGGCTTATC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS CAA 90 bp | GCTGAGTGCATGACTGCTTCTGAAGAGTCCACAACAATCTTCTTCTaGAATAGAGGGCAGTCCAACGTGAATGTCTCATACTCTCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: AECMTASEESTTIFF*NRGQSNVNVSYSPP Trigger: AGGTGGAGAGTATGAGACATTCACGTTGGACTGCCCTCTATTCAAGAAGAAGATTGTTGTGGACTCTTCAGAAGCAGTCATGCACTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS GCA 72 bp | GATTTGCTAATGCAACAATTTGATGCCCCTCAGCAATaGACTGCATCATGTTGTAACAGCTGTCCTTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: DLLMQQFDAPQQ*TASCCNSCPSH Trigger: GTGGGAAGGACAGCTGTTACAACATGATGCAGTGCATTGCTGAGGGGCATCAAATTGTTGCATTAGCAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS CAA 72 bp | CATCTGACTCCACTTGGTTTTCATCTGGTCTTAGATTaGCTAATGCAACAATTTGATGCCCCTCAGCAATGC | + |
|
Preference number: 6 (lower is better) Translates to: HLTPLGFHLVLD*LMQQFDAPQQC Trigger: GCATTGCTGAGGGGCATCAAATTGTTGCATTAGCAAATCTAAGACCAGATGAAAACCAAGTGGAGTCAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS CAA 72 bp | ATGACTGCTTCTGAAGAGTCCACAACAATCTTCTTCTaGAATAGAGGGCAGTCCAACGTGAATGTCTCATAC | + |
|
Preference number: 6 (lower is better) Translates to: MTASEESTTIFF*NRGQSNVNVSY Trigger: GTATGAGACATTCACGTTGGACTGCCCTCTATTCAAGAAGAAGATTGTTGTGGACTCTTCAGAAGCAGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS CAA 90 bp | TATCCAGTTCATCTGACTCCACTTGGTTTTCATCTGGTCTTAGATTaGCTAATGCAACAATTTGATGCCCCTCAGCAATGCACTGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: YPVHLTPLGFHLVLD*LMQQFDAPQQCTAS Trigger: TGATGCAGTGCATTGCTGAGGGGCATCAAATTGTTGCATTAGCAAATCTAAGACCAGATGAAAACCAAGTGGAGTCAGATGAACTGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS CAA 90 bp | TTATCAGGATCTAAGCCCAAAGCTGCTACTTTGATGATAATGGCCTaGATATTAGAAGCTATCATCTCTCGGAGCAAATCTTCCTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSGSKPKAATLMIMA*ILEAIISRSKSSWF Trigger: AAACCAGGAAGATTTGCTCCGAGAGATGATAGCTTCTAATATCAAGGCCATTATCATCAAAGTAGCAGCTTTGGGCTTAGATCCTGATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS TCA 72 bp | GGTTTCTTTGCCAAAGATAAGCTAAAGGCTGGAGATTaGGTCGTTTACATACATTTTCTACTCGTCCACGTT | + |
|
Preference number: 6 (lower is better) Translates to: GFFAKDKLKAGD*VVYIHFLLVHV Trigger: AACGTGGACGAGTAGAAAATGTATGTAAACGACTCAATCTCCAGCCTTTAGCTTATCTTTGGCAAAGAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||
| CDS CAA 72 bp | TCTAAGCCCAAAGCTGCTACTTTGATGATAATGGCCTaGATATTAGAAGCTATCATCTCTCGGAGCAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: SKPKAATLMIMA*ILEAIISRSKS Trigger: AGATTTGCTCCGAGAGATGATAGCTTCTAATATCAAGGCCATTATCATCAAAGTAGCAGCTTTGGGCTTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028640.14 ENSMUST00000055144.8 ENSMUST00000102542.10 |
||