Pregenerated sensors for DPH5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033554Ensembl transcript IDs: ENSMUST00000043342.10, ENSMUST00000106505.8, ENSMUST00000185098.8, ENSMUST00000189799.7, ENSMUST00000196804.5
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATTCATTGTCCAGTTTCCTCACGTTATTCTTGGTCTCCACCTCCTTaGATCGACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTG | + |
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Preference number: 1 (lower is better) Translates to: IHCPVSSRYSWSPPP*IDLAPFFSSICPRV Trigger: CACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGATGCAAGGAGGTGGAGACCAAGAATAACGTGAGGAAACTGGACAATGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR CCA 90 bp | GCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASDPITDGCEPPCGC*ELNSGPLEEQSVLL Trigger: TAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
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| 3UTR CCA 90 bp | TGTATTCTTCCCACATGGGATAAACTCCAGACTATCCACACCATATaGAAGACTTGCAGTCAAACTCCCACGGGCCTCACTGCAGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: CILPTWDKLQTIHTI*KTCSQTPTGLTAVP Trigger: TGGCACTGCAGTGAGGCCCGTGGGAGTTTGACTGCAAGTCTTCCATATGGTGTGGATAGTCTGGAGTTTATCCCATGTGGGAAGAATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| 3UTR TCA 90 bp | ACAACTCGGCATTCATTTAAGAAACACAGCATCACTTGCTCTCAGTaGAAGAGAAAGGGATACTGTGTGGGAAACTCAGGCTCAACCGTA | + |
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Preference number: 1 (lower is better) Translates to: TTRHSFKKHSITCSQ*KRKGYCVGNSGSTV Trigger: TACGGTTGAGCCTGAGTTTCCCACACAGTATCCCTTTCTCTTTCACTGAGAGCAAGTGATGCTGTGTTTCTTAAATGAATGCCGAGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
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| 3UTR CCA 90 bp | ATTTCAAGAAAGAAACTACAGAAACAGAACACAGCTCAGCGACTGTaGGATAAGCAATGTCCGACACTCCTATTCTCAGATTCATCAGAG | + |
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Preference number: 1 (lower is better) Translates to: ISRKKLQKQNTAQRL*DKQCPTLLFSDSSE Trigger: CTCTGATGAATCTGAGAATAGGAGTGTCGGACATTGCTTATCCCACAGTCGCTGAGCTGTGTTCTGTTTCTGTAGTTTCTTTCTTGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| 3UTR-3UTR CCA 90 bp | GACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTGCACCCTGACGAGTAAACTCACGATGGAATaGGGGAAGCTGCCGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: DLAPFFSSICPRVCTLTSKLTME*GKLPQE Trigger: TTCCTGCGGCAGCTTCCCCCATTCCATCGTGAGTTT...ACTCGTCAGGGTGCACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR-3UTR CCA 90 bp | CATCGACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTGCACCCTGACAAACTCACGATGGAATaGGGGAAGCTGCCGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HRLGSLFQLHLPTCVHPDKLTME*GKLPQE Trigger: TTCCTGCGGCAGCTTCCCCCATTCCATCGTGAGTTT...GTCAGGGTGCACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR CAA 90 bp | CCAGTTTCCTCACGTTATTCTTGGTCTCCACCTCCTTGCATCGACTaGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTGCACCCTG | + |
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Preference number: 2 (lower is better) Translates to: PVSSRYSWSPPPCID*APFFSSICPRVCTL Trigger: CAGGGTGCACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGATGCAAGGAGGTGGAGACCAAGAATAACGTGAGGAAACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR-3UTR GCA 90 bp | TCTCCACCTCCTTGCATCGACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTCGCTGTCGTTCAACCTaGTTCTTCTTGGTCACTTCG | + |
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Preference number: 2 (lower is better) Translates to: SPPPCIDLAPFFSSICPRRCRST*FFLVTS Trigger: CGAAGTGACCAAGAAGAAGCAGGTTGAACGACAGCG...ACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGATGCAAGGAGGTGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR-3UTR GCA 90 bp | TCCAGTTTCCTCACGTTATTCTTGGTCTCCACCTCCTTGCATCGACTTGGCTCCCGCTGTCGTTCAACCTaGTTCTTCTTGGTCACTTCG | + |
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Preference number: 2 (lower is better) Translates to: SSFLTLFLVSTSLHRLGSRCRST*FFLVTS Trigger: CGAAGTGACCAAGAAGAAGCAGGTTGAACGACAGCG...GGAGCCAAGTCGATGCAAGGAGGTGGAGACCAAGAATAACGTGAGGAAACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR-3UTR CCA 90 bp | CGACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTGCACCCTGACGAGCAACCTGCTTCTTCTTaGTCACTTCGGTTATATCTT | + |
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Preference number: 2 (lower is better) Translates to: RLGSLFQLHLPTCVHPDEQPASS*SLRLYL Trigger: AAGATATAACCGAAGTGACCAAGAAGAAGCAGGTTG...CTCGTCAGGGTGCACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR-3UTR CCA 90 bp | TCTGCTATCATGTACGGGAAAAGTGGAGGAGCTAGAAAGCAAACAGCTTCAAAACCAGCTCCTTGTCCTTaGCGGCATGGGGTGGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: SAIMYGKSGGARKQTASKPAPCP*RHGVGC Trigger: GCAACCCACCCCATGCCGCCAAGGACAAGGAGCTGG...TTTTGAAGCTGTTTGCTTTCTAGCTCCTCCACTTTTCCCGTACATGATAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| 3UTR CAA 90 bp | GATTCATTGTCCAGTTTCCTCACGTTATTCTTGGTCTCCACCTCCTaGCATCGACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGT | + |
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Preference number: 2 (lower is better) Translates to: DSLSSFLTLFLVSTS*HRLGSLFQLHLPTC Trigger: ACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGATGCAAGGAGGTGGAGACCAAGAATAACGTGAGGAAACTGGACAATGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR-3UTR GCA 90 bp | AGAAGAGAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTTTTTTCAGCTCCATCTaGCCACGTGTGTGCACCCTG | + |
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Preference number: 2 (lower is better) Translates to: RREHQIPLQMVVSHHVVAFFSSI*PRVCTL Trigger: CAGGGTGCACACACGTGGGCAGATGGAGCTGAAAAA...AGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTCTCTTCT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
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| 3UTR-3UTR CCA 90 bp | ATCGACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTGCACCCTGACGCAACCTGCTTCTTCTTaGTCACTTCGGTTATATCTT | + |
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Preference number: 2 (lower is better) Translates to: IDLAPFFSSICPRVCTLTQPASS*SLRLYL Trigger: AAGATATAACCGAAGTGACCAAGAAGAAGCAGGTTG...CGTCAGGGTGCACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCCTCCTTGCATCGACTTaGCTCCCTTTTTCAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: QKRASDPITDGCEPPCGCLLAST*LPFSAP Trigger: TGGAGCTGAAAAAGGGAGCCAAGTCGATGCAAGGAG...GCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTCTCTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
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| 3UTR-3UTR GCA 90 bp | CACAAAAACCATTTCAAGAAAGAAACTACAGAAACAGAACACAGCTCAGCGACTAAGGGTGGGGCGCTGTaGCACCTGTCTCCAAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: HKNHFKKETTETEHSSATKGGAL*HLSPKG Trigger: GCCTTTTGGAGACAGGTGGCACAGCGCCCCACCCTT...AGTCGCTGAGCTGTGTTCTGTTTCTGTAGTTTCTTTCTTGAAATGGTTTTTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAGAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTACACCCCAATCTCACTaGAATGATCGTGAGACAACA | + |
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Preference number: 2 (lower is better) Translates to: RREHQIPLQMVVSHHVVATPQSH*NDRETT Trigger: TGTTGTCTCACGATCATTTCAGTGAGATTGGGGTGT...AGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTCTCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
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| 3UTR-3UTR TCA 90 bp | ACGGGCCTCACTGCAGTGCCAGTAAAGTTCTGCTATCATGTACGGGAAAAGTGGTTTTACTACAATCTGTaGTCTGAGAGGGTGGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: TGLTAVPVKFCYHVREKWFYYNL*SERVAN Trigger: ATTTGCCACCCTCTCAGATCACAGATTGTAGTAAAA...CCACTTTTCCCGTACATGATAGCAGAACTTTACTGGCACTGCAGTGAGGCCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| 3UTR-3UTR GCA 90 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCACTTGCTGATTCATGCTaGTTTGTCCCTGAAAATCAG | + |
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Preference number: 2 (lower is better) Translates to: DPITDGCEPPCGCWELNSLADSC*FVPENQ Trigger: CTGATTTTCAGGGACAAAGCAGCATGAATCAGCAAG...TGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTTCAAGTGATTCATTGTCCAGTTTCCTCACGTTATTCTTGGTCTCCACCACACCCCAATCTCACTaGAATGATCGTGAGACAACA | + |
|
Preference number: 2 (lower is better) Translates to: QSSSDSLSSFLTLFLVSTTPQSH*NDRETT Trigger: TGTTGTCTCACGATCATTTCAGTGAGATTGGGGTGT...GGTGGAGACCAAGAATAACGTGAGGAAACTGGACAATGAATCACTTGAACTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR-3UTR GCA 90 bp | GAGGATAAAGCATTCAGTGCAAAAGAGATATTTGAAGAATGGCTGTATTCTTCCTCCCACGGGCCTCACTaGAGTGCCAGTAAAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: EDKAFSAKEIFEEWLYSSSHGPH*SASKVL Trigger: CAGAACTTTACTGGCACTGCAGTGAGGCCCGTGGGA...GGAAGAATACAGCCATTCTTCAAATATCTCTTTTGCACTGAATGCTTTATCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| 3UTR-3UTR CCA 90 bp | ACTTGGAGGCATAGTCACTGGACTATCTCATGGTACCAAGTGTATCTTTTAAAGGAAAGGGATACTGTGTaGGAAACTCAGGCTCAACCG | + |
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Preference number: 2 (lower is better) Translates to: TWRHSHWTISWYQVYLLKERDTV*ETQAQP Trigger: CGGTTGAGCCTGAGTTTCCCACACAGTATCCCTTTC...CTTTAAAAGATACACTTGGTACCATGAGATAGTCCAGTGACTATGCCTCCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
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| 3UTR CAA 90 bp | CACCTGTCTCCAAAAGGCAATGAGCATACAGGAACTGAGTTGAAGTaGCATTTTACTACAATCTGTGATCTGAGAGGGTGGCAAATGACA | + |
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Preference number: 2 (lower is better) Translates to: HLSPKGNEHTGTELK*HFTTICDLRGWQMT Trigger: TGTCATTTGCCACCCTCTCAGATCACAGATTGTAGTAAAATGCAACTTCAACTCAGTTCCTGTATGCTCATTGCCTTTTGGAGACAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| 3UTR-3UTR GCA 90 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCATTTCTTGCTGATTCATaGTGCTTTGTCCCTGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: DPITDGCEPPCGCWELNSFLADS*CFVPEN Trigger: ATTTTCAGGGACAAAGCAGCATGAATCAGCAAGAAA...TGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
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| 3UTR-3UTR GCA 90 bp | CAAAAACCATTTCAAGAAAGAAACTACAGAAACAGAACACAGCTCAGCGACTGTACCATATGGAAGACTTaGAGTCAAACTCCCACGGGC | + |
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Preference number: 2 (lower is better) Translates to: QKPFQERNYRNRTQLSDCTIWKT*SQTPTG Trigger: GCCCGTGGGAGTTTGACTGCAAGTCTTCCATATGGT...ACAGTCGCTGAGCTGTGTTCTGTTTCTGTAGTTTCTTTCTTGAAATGGTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGAGATTGAGTATATCCTCATAGACAGTTTCTTAAAAGCTACTGCTGCCTACATCACTTGCTCTCAGTaGAAGAGAAAGGGATACTGT | + |
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Preference number: 2 (lower is better) Translates to: IEIEYILIDSFLKATAAYITCSQ*KRKGYC Trigger: ACAGTATCCCTTTCTCTTTCACTGAGAGCAAGTGAT...GTAGGCAGCAGTAGCTTTTAAGAAACTGTCTATGAGGATATACTCAATCTCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
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| 3UTR-3UTR CCA 90 bp | CACAAAAACCATTTCAAGAAAGAAACTACAGAAACAGAACACAGCTCAGCGACTACTATCCACACCATATaGAAGACTTGCAGTCAAACT | + |
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Preference number: 2 (lower is better) Translates to: HKNHFKKETTETEHSSATTIHTI*KTCSQT Trigger: AGTTTGACTGCAAGTCTTCCATATGGTGTGGATAGT...AGTCGCTGAGCTGTGTTCTGTTTCTGTAGTTTCTTTCTTGAAATGGTTTTTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| 3UTR-3UTR CCA 90 bp | ACACAAAAACCATTTCAAGAAAGAAACTACAGAAACAGAACACAGCTCAGCGACGAGATATTTGAAGAATaGCTGTATTCTTCCCACATG | + |
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Preference number: 2 (lower is better) Translates to: TQKPFQERNYRNRTQLSDEIFEE*LYSSHM Trigger: CATGTGGGAAGAATACAGCCATTCTTCAAATATCTC...GTCGCTGAGCTGTGTTCTGTTTCTGTAGTTTCTTTCTTGAAATGGTTTTTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| 3UTR CCA 72 bp | GTGTGCACCCTGACGAGTAGGAAACTCACGATGGAATaGGGGAAGCTGCCGCAGGAAACCAAACGCTGTCGT | + |
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Preference number: 3 (lower is better) Translates to: VCTLTSRKLTME*GKLPQETKRCR Trigger: ACGACAGCGTTTGGTTTCCTGCGGCAGCTTCCCCCATTCCATCGTGAGTTTCCTACTCGTCAGGGTGCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR CCA 72 bp | ATCAGCTTGCAAGAGTCAGCACTCCCTCCATGTGGGTaGGTCCCAGAGTTAGAACTCAGGCTGCTGCACTTG | + |
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Preference number: 3 (lower is better) Translates to: ISLQESALPPCG*VPELELRLLHL Trigger: CAAGTGCAGCAGCCTGAGTTCTAACTCTGGGACCCACCCACATGGAGGGAGTGCTGACTCTTGCAAGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
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| 3UTR GCA 72 bp | TTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTaGACCCTGACGAGTAGGAAACTCACGATGGAATGG | + |
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Preference number: 3 (lower is better) Translates to: LAPFFSSICPRV*TLTSRKLTMEW Trigger: CCATTCCATCGTGAGTTTCCTACTCGTCAGGGTGCACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR GCA 72 bp | ACATTTGTTGAACTGGAGAGGGGGCGTGCCATACCATaGACATGGGAATCAGCTTGCAAGAGTCAGCACTCC | + |
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Preference number: 3 (lower is better) Translates to: TFVELERGRAIP*TWESACKSQHS Trigger: GGAGTGCTGACTCTTGCAAGCTGATTCCCATGTGCATGGTATGGCACGCCCCCTCTCCAGTTCAACAAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
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| 3UTR CCA 72 bp | CACGTTATTCTTGGTCTCCACCTCCTTGCATCGACTTaGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: HVILGLHLLAST*LPFSAPSAHVC Trigger: ACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGATGCAAGGAGGTGGAGACCAAGAATAACGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR GCA 72 bp | CCAGTTTCCTCACGTTATTCTTGGTCTCCACCTCCTTaGATCGACTTGGCTCCCTTTTTCAGCTCCATCTGC | + |
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Preference number: 3 (lower is better) Translates to: PVSSRYSWSPPP*IDLAPFFSSIC Trigger: GCAGATGGAGCTGAAAAAGGGAGCCAAGTCGATGCAAGGAGGTGGAGACCAAGAATAACGTGAGGAAACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR GCA 72 bp | ATGGAAGACTTGCAGTCAAACTCCCACGGGCCTCACTaGAGTGCCAGTAAAGTTCTGCTATCATGTACGGGA | + |
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Preference number: 3 (lower is better) Translates to: MEDLQSNSHGPH*SASKVLLSCTG Trigger: TCCCGTACATGATAGCAGAACTTTACTGGCACTGCAGTGAGGCCCGTGGGAGTTTGACTGCAAGTCTTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| 3UTR GCA 72 bp | GATAAACTCCAGACTATCCACACCATATGGAAGACTTaGAGTCAAACTCCCACGGGCCTCACTGCAGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: DKLQTIHTIWKT*SQTPTGLTAVP Trigger: TGGCACTGCAGTGAGGCCCGTGGGAGTTTGACTGCAAGTCTTCCATATGGTGTGGATAGTCTGGAGTTTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| 3UTR CCA 72 bp | CCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: PITDGCEPPCGC*ELNSGPLEEQS Trigger: TGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
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| 3UTR CCA 72 bp | CCCACATGGGATAAACTCCAGACTATCCACACCATATaGAAGACTTGCAGTCAAACTCCCACGGGCCTCACT | + |
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Preference number: 3 (lower is better) Translates to: PTWDKLQTIHTI*KTCSQTPTGLT Trigger: AGTGAGGCCCGTGGGAGTTTGACTGCAAGTCTTCCATATGGTGTGGATAGTCTGGAGTTTATCCCATGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| 3UTR-3UTR CAA 90 bp | CACCTCCTTGCATCGACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTTCAACCTGCTTCTTCTaGGTCACTTCGGTTATATCT | + |
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Preference number: 3 (lower is better) Translates to: HLLASTWLPFSAPSAHVCSTCFF*VTSVIS Trigger: AGATATAACCGAAGTGACCAAGAAGAAGCAGGTTGA...ACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGATGCAAGGAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR TCA 72 bp | CCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGGAATTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEESIRSHYRWL*ATMWLLGIELR Trigger: CCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTCTCTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
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| 3UTR-3UTR CAA 90 bp | CAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCCTGATTCATGCTGCTTaGTCCCTGAAAATCAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: QKRASDPITDGCEPPCGCLIHAA*SLKIRV Trigger: AACTCTGATTTTCAGGGACAAAGCAGCATGAATCAG...GCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTCTCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
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| 3UTR GCA 72 bp | GTATATCCTCATAGACAGTTTCTTAAAAGCTACTGCTaGCTACTATGCAGGGACCACAGCGGCCATGGATTG | + |
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Preference number: 3 (lower is better) Translates to: VYPHRQFLKSYC*LLCRDHSGHGL Trigger: CAATCCATGGCCGCTGTGGTCCCTGCATAGTAGGCAGCAGTAGCTTTTAAGAAACTGTCTATGAGGATATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
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| 3UTR CCA 72 bp | CAAGTGATTCATTGTCCAGTTTCCTCACGTTATTCTTaGTCTCCACCTCCTTGCATCGACTTGGCTCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: QVIHCPVSSRYS*SPPPCIDLAPF Trigger: AAAGGGAGCCAAGTCGATGCAAGGAGGTGGAGACCAAGAATAACGTGAGGAAACTGGACAATGAATCACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR-3UTR CAA 90 bp | GTGATTCATTGTCCAGTTTCCTCACGTTATTCTTGGTCTCCACCTCCTTGCATCTCAACCTGCTTCTTCTaGGTCACTTCGGTTATATCT | + |
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Preference number: 3 (lower is better) Translates to: VIHCPVSSRYSWSPPPCISTCFF*VTSVIS Trigger: AGATATAACCGAAGTGACCAAGAAGAAGCAGGTTGA...GATGCAAGGAGGTGGAGACCAAGAATAACGTGAGGAAACTGGACAATGAATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| 3UTR CCA 72 bp | AAGAAACTACAGAAACAGAACACAGCTCAGCGACTGTaGGATAAGCAATGTCCGACACTCCTATTCTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: KKLQKQNTAQRL*DKQCPTLLFSD Trigger: ATCTGAGAATAGGAGTGTCGGACATTGCTTATCCCACAGTCGCTGAGCTGTGTTCTGTTTCTGTAGTTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| 3UTR TCA 72 bp | CATTCATTTAAGAAACACAGCATCACTTGCTCTCAGTaGAAGAGAAAGGGATACTGTGTGGGAAACTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HSFKKHSITCSQ*KRKGYCVGNSG Trigger: GCCTGAGTTTCCCACACAGTATCCCTTTCTCTTTCACTGAGAGCAAGTGATGCTGTGTTTCTTAAATGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTTGGAGGCATAGTCACTGGACTATCTCATGGTACCAAGTGTATCTTTTAAAGGAAACACAGCATCACTaGCTCTCAGTGAAAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TWRHSHWTISWYQVYLLKETQHH*LSVKEK Trigger: TTTCTCTTTCACTGAGAGCAAGTGATGCTGTGTTTC...CTTTAAAAGATACACTTGGTACCATGAGATAGTCCAGTGACTATGCCTCCAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
||
| 3UTR CCA 72 bp | AAGAGATATTTGAAGAATGGCTGTATTCTTCCCACATaGGATAAACTCCAGACTATCCACACCATATGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KRYLKNGCILPT*DKLQTIHTIWK Trigger: CTTCCATATGGTGTGGATAGTCTGGAGTTTATCCCATGTGGGAAGAATACAGCCATTCTTCAAATATCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTGAAGACAGATCAGGAAAAGTTACCCATTCAGAACACAAAAACCATTTCAAGGGAACTGAGTTGAAGTaGCATTTTACTACAATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: REDRSGKVTHSEHKNHFKGTELK*HFTTIC Trigger: ACAGATTGTAGTAAAATGCAACTTCAACTCAGTTCC...CTTGAAATGGTTTTTGTGTTCTGAATGGGTAACTTTTCCTGATCTGTCTTCACG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAGAGATTGAGTATATCCTCATAGACAGTTTCTTAAAAGCTACTGCTGCCTACCTCTCTGAGCCACAATaGTTAGAGTTAAAAGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: IEIEYILIDSFLKATAAYLSEPQ*LELKVT Trigger: AGTTACTTTTAACTCTAACAATTGTGGCTCAGAGAG...GTAGGCAGCAGTAGCTTTTAAGAAACTGTCTATGAGGATATACTCAATCTCTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
||
| CDS-3UTR TCA 90 bp | ATCGACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTGCACCCTGACGAGAGTGTCTCCTCAGTaGTTGCTGGTTCCTCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: IDLAPFFSSICPRVCTLTRVSPQ*LLVPPR Trigger: GCGGGGAGGAACCAGCAATCACTGAGGAGACACTCT...CGTCAGGGTGCACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR TCA 90 bp | GGTCTCCACCTCCTTGCATCGACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACCCCTACAGTCAGGACTaGGGTGTAGGCTTCCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GLHLLASTWLPFSAPSAHPYSQD*GVGFQI Trigger: TATCTGGAAGCCTACACCTCAGTCCTGACTGTAGGG...GTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGATGCAAGGAGGTGGAGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR GCA 90 bp | CATCGACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTGCACCCTGACCTCCCAAGCTCACTGTaGACATCTGCTGTAACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HRLGSLFQLHLPTCVHPDLPSSL*TSAVTC Trigger: GCACGTTACAGCAGATGTGCACAGTGAGCTTGGGAG...GTCAGGGTGCACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| 3UTR CAA 72 bp | TCACGTTATTCTTGGTCTCCACCTCCTTGCATCGACTaGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRYSWSPPPCID*APFFSSICPRV Trigger: CACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGATGCAAGGAGGTGGAGACCAAGAATAACGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWE*NSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
||
| CDS-3UTR TCA 90 bp | CACCTCCTTGCATCGACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTACTGCTCCTTCACTTTaGTATCGAGTAAGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: HLLASTWLPFSAPSAHVCTAPSL*YRVSTA Trigger: CGCTGTGCTTACTCGATATCAAAGTGAAGGAGCAGT...ACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGATGCAAGGAGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR CCA 90 bp | GACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTGCACCCTGACGAGTTGTTGTAGCCCCAAATaGATCACCAACCACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLAPFFSSICPRVCTLTSCCSPK*ITNHKE Trigger: TTCCTTGTGGTTGGTGATCCATTTGGGGCTACAACA...ACTCGTCAGGGTGCACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR CCA 90 bp | ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTAGCTGCTGGGCCGCCTaGTTCACACTCATGTACCGA | + |
|
Preference number: 4 (lower is better) Translates to: ITDGCEPPCGCWELNSGPSCWAA*FTLMYR Trigger: TCGGTACATGAGTGTGAACCAGGCGGCCCAGCAGCT...AGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
||
| CDS-3UTR TCA 90 bp | GATTACCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGAGAGTGTCTCCTCAGTaGTTGCTGGTTCCTCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: DYLSSDTPEESIRSHYRWRVSPQ*LLVPPR Trigger: GCGGGGAGGAACCAGCAATCACTGAGGAGACACTCT...CCATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGGTAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
||
| CDS-3UTR GCA 90 bp | CACCTCCTTGCATCGACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTAGGTTCTCCAGAGACTaGTCCTTCACTTTGATATCG | + |
|
Preference number: 4 (lower is better) Translates to: HLLASTWLPFSAPSAHVCRFSRD*SFTLIS Trigger: CGATATCAAAGTGAAGGAGCAGTCTCTGGAGAACCT...ACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGATGCAAGGAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR CCA 90 bp | GTGATTCATTGTCCAGTTTCCTCACGTTATTCTTGGTCTCCACCTCCTTGCATCCATCTCCATCTCCAGTaGGTGCAGGTTGCCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VIHCPVSSRYSWSPPPCIHLHLQ*VQVAPC Trigger: ACAGGGGGCAACCTGCACCCACTGGAGATGGAGATG...GATGCAAGGAGGTGGAGACCAAGAATAACGTGAGGAAACTGGACAATGAATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR CCA 90 bp | CATTGTCCAGTTTCCTCACGTTATTCTTGGTCTCCACCTCCTTGCATCGACTTGGTCAAAGAAGCTCTCTaGTCGCCAAGTGTCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HCPVSSRYSWSPPPCIDLVKEAL*SPSVRP Trigger: TGGACGGACACTTGGCGACCAGAGAGCTTCTTTGAC...CAAGTCGATGCAAGGAGGTGGAGACCAAGAATAACGTGAGGAAACTGGACAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR CCA 90 bp | CAGAGTTCAAGTGATTCATTGTCCAGTTTCCTCACGTTATTCTTGGTCTCCACCAGCTGCTGGGCCGCCTaGTTCACACTCATGTACCGA | + |
|
Preference number: 4 (lower is better) Translates to: QSSSDSLSSFLTLFLVSTSCWAA*FTLMYR Trigger: TCGGTACATGAGTGTGAACCAGGCGGCCCAGCAGCT...GGTGGAGACCAAGAATAACGTGAGGAAACTGGACAATGAATCACTTGAACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR CCA 90 bp | ATACACGATTACCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACCATCTCCATCTCCAGTaGGTGCAGGTTGCCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IHDYLSSDTPEESIRSHYHLHLQ*VQVAPC Trigger: ACAGGGGGCAACCTGCACCCACTGGAGATGGAGATG...GTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGGTAATCGTGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
||
| 3UTR CAA 72 bp | TCCAGTTTCCTCACGTTATTCTTGGTCTCCACCTCCTaGCATCGACTTGGCTCCCTTTTTCAGCTCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSFLTLFLVSTS*HRLGSLFQLHL Trigger: CAGATGGAGCTGAAAAAGGGAGCCAAGTCGATGCAAGGAGGTGGAGACCAAGAATAACGTGAGGAAACTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR TCA 90 bp | ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCCTGCTGCAATTTTCTaGTCTTCAGCTCCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ITDGCEPPCGCWELNSGPPAAIF*SSAPTL Trigger: CAGAGTGGGAGCTGAAGATCAGAAAATTGCAGCAGG...AGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
||
| CDS-3UTR TCA 90 bp | CAGAGTTCAAGTGATTCATTGTCCAGTTTCCTCACGTTATTCTTGGTCTCCACCCCTGCTGCAATTTTCTaGTCTTCAGCTCCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSSSDSLSSFLTLFLVSTPAAIF*SSAPTL Trigger: CAGAGTGGGAGCTGAAGATCAGAAAATTGCAGCAGG...GGTGGAGACCAAGAATAACGTGAGGAAACTGGACAATGAATCACTTGAACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR GCA 90 bp | CCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGAACATCTGCTGTAACGTaGCTGCTGCAATTTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PITDGCEPPCGCWELNSGTSAVT*LLQFSD Trigger: ATCAGAAAATTGCAGCAGGCACGTTACAGCAGATGT...TCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGAGAAAGGGATACTGTGTGGGAAACTCAGGCTCAACCGTACTGATGAGTGTTGTAGCCCCAAATaGATCACCAACCACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKEKGILCGKLRLNRTDECCSPK*ITNHKE Trigger: TTCCTTGTGGTTGGTGATCCATTTGGGGCTACAACA...CTCATCAGTACGGTTGAGCCTGAGTTTCCCACACAGTATCCCTTTCTCTTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
||
| CDS-3UTR TCA 90 bp | TGGATTTCAGCAAGATATATCAGGGAAGGCATTATTTCATGGATGCTAAGATGCCCCTACAGTCAGGACTaGGGTGTAGGCTTCCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: WISARYIREGIISWMLRCPYSQD*GVGFQI Trigger: TATCTGGAAGCCTACACCTCAGTCCTGACTGTAGGG...GCATCTTAGCATCCATGAAATAATGCCTTCCCTGATATATCTTGCTGAAATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
||
| CDS-3UTR TCA 90 bp | CAAACAGCTTCAAAAAGAAGCGAAGGAAGCACACTACCTCTTTTTAACATTTGCCCCTACAGTCAGGACTaGGGTGTAGGCTTCCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: QTASKRSEGSTLPLFNICPYSQD*GVGFQI Trigger: TATCTGGAAGCCTACACCTCAGTCCTGACTGTAGGG...GCAAATGTTAAAAAGAGGTAGTGTGCTTCCTTCGCTTCTTTTTGAAGCTGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
||
| CDS-3UTR TCA 90 bp | GAAAATCAGAGTTCAAGTGATTCATTGTCCAGTTTCCTCACGTTATTCTTGGTCCCCTACAGTCAGGACTaGGGTGTAGGCTTCCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: ENQSSSDSLSSFLTLFLVPYSQD*GVGFQI Trigger: TATCTGGAAGCCTACACCTCAGTCCTGACTGTAGGG...GACCAAGAATAACGTGAGGAAACTGGACAATGAATCACTTGAACTCTGATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR GCA 90 bp | GTGATTCATTGTCCAGTTTCCTCACGTTATTCTTGGTCTCCACCTCCTTGCATCACATCTGCTGTAACGTaGCTGCTGCAATTTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VIHCPVSSRYSWSPPPCITSAVT*LLQFSD Trigger: ATCAGAAAATTGCAGCAGGCACGTTACAGCAGATGT...GATGCAAGGAGGTGGAGACCAAGAATAACGTGAGGAAACTGGACAATGAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR GCA 90 bp | CTGAAAATCAGAGTTCAAGTGATTCATTGTCCAGTTTCCTCACGTTATTCTTGGCTCCCAAGCTCACTGTaGACATCTGCTGTAACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKIRVQVIHCPVSSRYSWLPSSL*TSAVTC Trigger: GCACGTTACAGCAGATGTGCACAGTGAGCTTGGGAG...CCAAGAATAACGTGAGGAAACTGGACAATGAATCACTTGAACTCTGATTTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR GCA 90 bp | CAAGAGTCAATAACCGTGAAGACAGATCAGGAAAAGTTACCCATTCAGAACACAAGGTTCTCCAGAGACTaGTCCTTCACTTTGATATCG | + |
|
Preference number: 4 (lower is better) Translates to: QESITVKTDQEKLPIQNTRFSRD*SFTLIS Trigger: CGATATCAAAGTGAAGGAGCAGTCTCTGGAGAACCT...TGTGTTCTGAATGGGTAACTTTTCCTGATCTGTCTTCACGGTTATTGACTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
||
| CDS-3UTR GCA 90 bp | TGGATTTCAGCAAGATATATCAGGGAAGGCATTATTTCATGGATGCTAAGATGCCTTTGTGGCATTACCTaGAAACCACAGCAGCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: WISARYIREGIISWMLRCLCGIT*KPQQPT Trigger: TGTAGGCTGCTGTGGTTTGCAGGTAATGCCACAAAG...GCATCTTAGCATCCATGAAATAATGCCTTCCCTGATATATCTTGCTGAAATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
||
| CDS-3UTR GCA 90 bp | GAAAATCAGAGTTCAAGTGATTCATTGTCCAGTTTCCTCACGTTATTCTTGGTCAGGTTCTCCAGAGACTaGTCCTTCACTTTGATATCG | + |
|
Preference number: 4 (lower is better) Translates to: ENQSSSDSLSSFLTLFLVRFSRD*SFTLIS Trigger: CGATATCAAAGTGAAGGAGCAGTCTCTGGAGAACCT...GACCAAGAATAACGTGAGGAAACTGGACAATGAATCACTTGAACTCTGATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR CCA 90 bp | ACACAAAAACCATTTCAAGAAAGAAACTACAGAAACAGAACACAGCTCAGCGACTGTTGTAGCCCCAAATaGATCACCAACCACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TQKPFQERNYRNRTQLSDCCSPK*ITNHKE Trigger: TTCCTTGTGGTTGGTGATCCATTTGGGGCTACAACA...GTCGCTGAGCTGTGTTCTGTTTCTGTAGTTTCTTTCTTGAAATGGTTTTTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
||
| CDS-3UTR CCA 90 bp | GAAAATCAGAGTTCAAGTGATTCATTGTCCAGTTTCCTCACGTTATTCTTGGTCTGTTGTAGCCCCAAATaGATCACCAACCACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ENQSSSDSLSSFLTLFLVCCSPK*ITNHKE Trigger: TTCCTTGTGGTTGGTGATCCATTTGGGGCTACAACA...GACCAAGAATAACGTGAGGAAACTGGACAATGAATCACTTGAACTCTGATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR CCA 90 bp | GAGATTGAGTATATCCTCATAGACAGTTTCTTAAAAGCTACTGCTGCCTACTATAACACACTTCCTTTGTaGCATTACCTGCAAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: EIEYILIDSFLKATAAYYNTLPL*HYLQTT Trigger: TGTGGTTTGCAGGTAATGCCACAAAGGAAGTGTGTT...ATAGTAGGCAGCAGTAGCTTTTAAGAAACTGTCTATGAGGATATACTCAATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
||
| CDS-3UTR CAA 90 bp | GACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTGCACCCTGACGAGTTTGACTGTGATGTCCTaGGCATCTCCCAGGCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DLAPFFSSICPRVCTLTSLTVMS*ASPRPK Trigger: CTTGGGCCTGGGAGATGCCAAGGACATCACAGTCAA...ACTCGTCAGGGTGCACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR CAA 90 bp | GACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTGCACCCTGACGAGTTCCAGTGGGTGCAGGTaGCCCCCTGTAATGACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: DLAPFFSSICPRVCTLTSSSGCR*PPVMTK Trigger: TTTGGTCATTACAGGGGGCAACCTGCACCCACTGGA...ACTCGTCAGGGTGCACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR CAA 90 bp | TCTCCACCTCCTTGCATCGACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTTTGACTGTGATGTCCTaGGCATCTCCCAGGCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPPPCIDLAPFFSSICPRLTVMS*ASPRPK Trigger: CTTGGGCCTGGGAGATGCCAAGGACATCACAGTCAA...ACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGATGCAAGGAGGTGGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS TCA 90 bp | CTTCAGCTCCCACTCTGGCTAAGCCGACACAGAGTGTCTCCTCAGTaGTTGCTGGTTCCTCCCCGCGTGCTCTGTGATTCTGAACAATCT | + |
|
Preference number: 5 (lower is better) Translates to: LQLPLWLSRHRVSPQ*LLVPPRVLCDSEQS Trigger: AGATTGTTCAGAATCACAGAGCACGCGGGGAGGAACCAGCAATCACTGAGGAGACACTCTGTGTCGGCTTAGCCAGAGTGGGAGCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR CAA 90 bp | GACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTGCACCCTGACGAGTCGGTTCCTCTTCACCTaGTCAAAGAAGCTCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: DLAPFFSSICPRVCTLTSRFLFT*SKKLSG Trigger: ACCAGAGAGCTTCTTTGACAAGGTGAAGAGGAACCG...ACTCGTCAGGGTGCACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS GCA 90 bp | TCCATCTCCAGTGGGTGCAGGTTGCCCCCTGTAATGACCAAAGAATaGAGTGGTTCTCCCAAGCTCACTGTGCACATCTGCTGTAACGTG | + |
|
Preference number: 5 (lower is better) Translates to: SISSGCRLPPVMTKE*SGSPKLTVHICCNV Trigger: CACGTTACAGCAGATGTGCACAGTGAGCTTGGGAGAACCACTGCATTCTTTGGTCATTACAGGGGGCAACCTGCACCCACTGGAGATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS TCA 90 bp | AAGCTCACTGTGCACATCTGCTGTAACGTGCCTGCTGCAATTTTCTaGTCTTCAGCTCCCACTCTGGCTAAGCCGACACAGAGTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KLTVHICCNVPAAIF*SSAPTLAKPTQSVS Trigger: GGAGACACTCTGTGTCGGCTTAGCCAGAGTGGGAGCTGAAGATCAGAAAATTGCAGCAGGCACGTTACAGCAGATGTGCACAGTGAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS-3UTR CAA 90 bp | TCCAGTTTCCTCACGTTATTCTTGGTCTCCACCTCCTTGCATCGACTTGGCTCCACAACTTCCAGGCCCTaGACTGTGATGTCCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSFLTLFLVSTSLHRLGSTTSRP*TVMSLA Trigger: TGCCAAGGACATCACAGTCAAGGGCCTGGAAGTTGT...GGAGCCAAGTCGATGCAAGGAGGTGGAGACCAAGAATAACGTGAGGAAACTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
||
| CDS TCA 90 bp | TCTTCCATAAAACTCTTCCAGGGCTTCCTTCCCTACAGTCAGGACTaGGGTGTAGGCTTCCAGATACACGCGACTGCATCGTCTCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSIKLFQGFLPYSQD*GVGFQIHATASSHN Trigger: GTTGTGAGACGATGCAGTCGCGTGTATCTGGAAGCCTACACCTCAGTCCTGACTGTAGGGAAGGAAGCCCTGGAAGAGTTTTATGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043342.10 ENSMUST00000106505.8 ENSMUST00000185098.8 ENSMUST00000189799.7 ENSMUST00000196804.5 |
||
| CDS GCA 90 bp | AATGCAGTGGTTCTCCCAAGCTCACTGTGCACATCTGCTGTAACGTaGCTGCTGCAATTTTCTGATCTTCAGCTCCCACTCTGGCTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NAVVLPSSLCTSAVT*LLQFSDLQLPLWLS Trigger: GCTTAGCCAGAGTGGGAGCTGAAGATCAGAAAATTGCAGCAGGCACGTTACAGCAGATGTGCACAGTGAGCTTGGGAGAACCACTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| CDS GCA 90 bp | GATTCCGGTATAGAGAAGAGACTTAGCATCTCCATCTCCAGTGGGTaGAGGTTGCCCCCTGTAATGACCAAAGAATGCAGTGGTTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: DSGIEKRLSISISSG*RLPPVMTKECSGSP Trigger: GGGAGAACCACTGCATTCTTTGGTCATTACAGGGGGCAACCTGCACCCACTGGAGATGGAGATGCTAAGTCTCTTCTCTATACCGGAATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| CDS-3UTR CAA 90 bp | ATCGACTTGGCTCCCTTTTTCAGCTCCATCTGCCCACGTGTGTGCACCCTGACGGGCATTGTGAATAACTaGATAAGGGATGCCCAACTT | + |
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Preference number: 5 (lower is better) Translates to: IDLAPFFSSICPRVCTLTGIVNN*IRDAQL Trigger: AAGTTGGGCATCCCTTATCAAGTTATTCACAATGCC...CGTCAGGGTGCACACACGTGGGCAGATGGAGCTGAAAAAGGGAGCCAAGTCGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| CDS-3UTR CAA 90 bp | ATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTTCCAGTGGGTGCAGGTaGCCCCCTGTAATGACCAAA | + |
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Preference number: 5 (lower is better) Translates to: ITDGCEPPCGCWELNSGPSSGCR*PPVMTK Trigger: TTTGGTCATTACAGGGGGCAACCTGCACCCACTGGA...AGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043342.10 |
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| CDS CCA 90 bp | CATGCCATTGGCCCGGTTCCTCTTCACCTTGTCAAAGAAGCTCTCTaGTCGCCAAGTGTCCGTCCAAAACACAATAGAAACTGTTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: HAIGPVPLHLVKEAL*SPSVRPKHNRNCFS Trigger: GGAGAAACAGTTTCTATTGTGTTTTGGACGGACACTTGGCGACCAGAGAGCTTCTTTGACAAGGTGAAGAGGAACCGGGCCAATGGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043342.10 ENSMUST00000185098.8 ENSMUST00000189799.7 |
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| CDS-3UTR CAA 90 bp | GTCCTGGAAACATCAATAGAGCACTCTTTCCAGCTCTCTGAGCCACAATTGTTATTGACTGTGATGTCCTaGGCATCTCCCAGGCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: VLETSIEHSFQLSEPQLLLTVMS*ASPRPK Trigger: CTTGGGCCTGGGAGATGCCAAGGACATCACAGTCAA...TAACAATTGTGGCTCAGAGAGCTGGAAAGAGTGCTCTATTGATGTTTCCAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
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| CDS-3UTR CAA 90 bp | CACAAAAACCATTTCAAGAAAGAAACTACAGAAACAGAACACAGCTCAGCGACTTTGACTGTGATGTCCTaGGCATCTCCCAGGCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: HKNHFKKETTETEHSSATLTVMS*ASPRPK Trigger: CTTGGGCCTGGGAGATGCCAAGGACATCACAGTCAA...AGTCGCTGAGCTGTGTTCTGTTTCTGTAGTTTCTTTCTTGAAATGGTTTTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| CDS-3UTR CAA 90 bp | ACAGCTTCAAAAAGAAGCGAAGGAAGCACACTACCTCTTTTTAACATTTGCCCCCGGTTCCTCTTCACCTaGTCAAAGAAGCTCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: TASKRSEGSTLPLFNICPRFLFT*SKKLSG Trigger: ACCAGAGAGCTTCTTTGACAAGGTGAAGAGGAACCG...GGGGCAAATGTTAAAAAGAGGTAGTGTGCTTCCTTCGCTTCTTTTTGAAGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| CDS-3UTR CAA 90 bp | ATGACAGAGCCATGCCATTTGACATATAAATACCACACACACCCCAATCTCACTCGGTTCCTCTTCACCTaGTCAAAGAAGCTCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: MTEPCHLTYKYHTHPNLTRFLFT*SKKLSG Trigger: ACCAGAGAGCTTCTTTGACAAGGTGAAGAGGAACCG...AGTGAGATTGGGGTGTGTGTGGTATTTATATGTCAAATGGCATGGCTCTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| CDS-3UTR CAA 90 bp | GTGATTCATTGTCCAGTTTCCTCACGTTATTCTTGGTCTCCACCTCCTTGCATCGGCATTGTGAATAACTaGATAAGGGATGCCCAACTT | + |
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Preference number: 5 (lower is better) Translates to: VIHCPVSSRYSWSPPPCIGIVNN*IRDAQL Trigger: AAGTTGGGCATCCCTTATCAAGTTATTCACAATGCC...GATGCAAGGAGGTGGAGACCAAGAATAACGTGAGGAAACTGGACAATGAATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| CDS GCA 90 bp | TATGGAGGCATTGTGAATAACTTGATAAGGGATGCCCAACTTTGTTaGTCTCAGAATAAGATCACTGTGTGTTGTAGCCCCAAATGGATC | + |
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Preference number: 5 (lower is better) Translates to: YGGIVNNLIRDAQLC*SQNKITVCCSPKWI Trigger: GATCCATTTGGGGCTACAACACACAGTGATCTTATTCTGAGAGCAACAAAGTTGGGCATCCCTTATCAAGTTATTCACAATGCCTCCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043342.10 ENSMUST00000106505.8 ENSMUST00000185098.8 ENSMUST00000189799.7 ENSMUST00000196804.5 |
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| CDS-3UTR CAA 90 bp | AAAAACCATTTCAAGAAAGAAACTACAGAAACAGAACACAGCTCAGCGACTGTGGGCATTGTGAATAACTaGATAAGGGATGCCCAACTT | + |
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Preference number: 5 (lower is better) Translates to: KNHFKKETTETEHSSATVGIVNN*IRDAQL Trigger: AAGTTGGGCATCCCTTATCAAGTTATTCACAATGCC...CACAGTCGCTGAGCTGTGTTCTGTTTCTGTAGTTTCTTTCTTGAAATGGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| CDS-3UTR CAA 90 bp | ATAGAGATTGAGTATATCCTCATAGACAGTTTCTTAAAAGCTACTGCTGCCTACGGCATTGTGAATAACTaGATAAGGGATGCCCAACTT | + |
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Preference number: 5 (lower is better) Translates to: IEIEYILIDSFLKATAAYGIVNN*IRDAQL Trigger: AAGTTGGGCATCCCTTATCAAGTTATTCACAATGCC...GTAGGCAGCAGTAGCTTTTAAGAAACTGTCTATGAGGATATACTCAATCTCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
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| CDS CAA 90 bp | GCTTCCAGATACACGCGACTGCATCGTCTCACAACTTCCAGGCCCTaGACTGTGATGTCCTTGGCATCTCCCAGGCCCAAGCCGATCAAG | + |
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Preference number: 6 (lower is better) Translates to: ASRYTRLHRLTTSRP*TVMSLASPRPKPIK Trigger: CTTGATCGGCTTGGGCCTGGGAGATGCCAAGGACATCACAGTCAAGGGCCTGGAAGTTGTGAGACGATGCAGTCGCGTGTATCTGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043342.10 ENSMUST00000106505.8 ENSMUST00000185098.8 ENSMUST00000189799.7 ENSMUST00000196804.5 |
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| CDS TCA 72 bp | CCACTCTGGCTAAGCCGACACAGAGTGTCTCCTCAGTaGTTGCTGGTTCCTCCCCGCGTGCTCTGTGATTCT | + |
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Preference number: 6 (lower is better) Translates to: PLWLSRHRVSPQ*LLVPPRVLCDS Trigger: AGAATCACAGAGCACGCGGGGAGGAACCAGCAATCACTGAGGAGACACTCTGTGTCGGCTTAGCCAGAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| CDS CAA 72 bp | TACACGCGACTGCATCGTCTCACAACTTCCAGGCCCTaGACTGTGATGTCCTTGGCATCTCCCAGGCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: YTRLHRLTTSRP*TVMSLASPRPK Trigger: CTTGGGCCTGGGAGATGCCAAGGACATCACAGTCAAGGGCCTGGAAGTTGTGAGACGATGCAGTCGCGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043342.10 ENSMUST00000106505.8 ENSMUST00000185098.8 ENSMUST00000189799.7 ENSMUST00000196804.5 |
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| CDS CAA 72 bp | AGCGTGTGCATGCCATTGGCCCGGTTCCTCTTCACCTaGTCAAAGAAGCTCTCTGGTCGCCAAGTGTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: SVCMPLARFLFT*SKKLSGRQVSV Trigger: GACGGACACTTGGCGACCAGAGAGCTTCTTTGACAAGGTGAAGAGGAACCGGGCCAATGGCATGCACACGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043342.10 ENSMUST00000185098.8 ENSMUST00000189799.7 |
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| CDS TCA 72 bp | AAACTCTTCCAGGGCTTCCTTCCCTACAGTCAGGACTaGGGTGTAGGCTTCCAGATACACGCGACTGCATCG | + |
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Preference number: 6 (lower is better) Translates to: KLFQGFLPYSQD*GVGFQIHATAS Trigger: CGATGCAGTCGCGTGTATCTGGAAGCCTACACCTCAGTCCTGACTGTAGGGAAGGAAGCCCTGGAAGAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043342.10 ENSMUST00000106505.8 ENSMUST00000185098.8 ENSMUST00000189799.7 ENSMUST00000196804.5 |
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| CDS GCA 72 bp | AGTGGGTGCAGGTTGCCCCCTGTAATGACCAAAGAATaGAGTGGTTCTCCCAAGCTCACTGTGCACATCTGC | + |
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Preference number: 6 (lower is better) Translates to: SGCRLPPVMTKE*SGSPKLTVHIC Trigger: GCAGATGTGCACAGTGAGCTTGGGAGAACCACTGCATTCTTTGGTCATTACAGGGGGCAACCTGCACCCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| CDS CAA 90 bp | AGTAAGCACAGCGTGTGCATGCCATTGGCCCGGTTCCTCTTCACCTaGTCAAAGAAGCTCTCTGGTCGCCAAGTGTCCGTCCAAAACACA | + |
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Preference number: 6 (lower is better) Translates to: SKHSVCMPLARFLFT*SKKLSGRQVSVQNT Trigger: TGTGTTTTGGACGGACACTTGGCGACCAGAGAGCTTCTTTGACAAGGTGAAGAGGAACCGGGCCAATGGCATGCACACGCTGTGCTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043342.10 ENSMUST00000185098.8 ENSMUST00000189799.7 |
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| CDS TCA 72 bp | GTGCACATCTGCTGTAACGTGCCTGCTGCAATTTTCTaGTCTTCAGCTCCCACTCTGGCTAAGCCGACACAG | + |
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Preference number: 6 (lower is better) Translates to: VHICCNVPAAIF*SSAPTLAKPTQ Trigger: CTGTGTCGGCTTAGCCAGAGTGGGAGCTGAAGATCAGAAAATTGCAGCAGGCACGTTACAGCAGATGTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| CDS CAA 90 bp | TGCTCCTTCACTTTGATATCGAGTAAGCACAGCGTGTGCATGCCATaGGCCCGGTTCCTCTTCACCTTGTCAAAGAAGCTCTCTGGTCGC | + |
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Preference number: 6 (lower is better) Translates to: CSFTLISSKHSVCMP*ARFLFTLSKKLSGR Trigger: GCGACCAGAGAGCTTCTTTGACAAGGTGAAGAGGAACCGGGCCAATGGCATGCACACGCTGTGCTTACTCGATATCAAAGTGAAGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043342.10 ENSMUST00000185098.8 ENSMUST00000189799.7 |
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| CDS CCA 72 bp | GGCCCGGTTCCTCTTCACCTTGTCAAAGAAGCTCTCTaGTCGCCAAGTGTCCGTCCAAAACACAATAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: GPVPLHLVKEAL*SPSVRPKHNRN Trigger: GTTTCTATTGTGTTTTGGACGGACACTTGGCGACCAGAGAGCTTCTTTGACAAGGTGAAGAGGAACCGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043342.10 ENSMUST00000185098.8 ENSMUST00000189799.7 |
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| CDS CAA 90 bp | ATCTTTCTTCCTCTGATGAGGTTCTCCAGAGACTGCTCCTTCACTTaGATATCGAGTAAGCACAGCGTGTGCATGCCATTGGCCCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: IFLPLMRFSRDCSFT*ISSKHSVCMPLARF Trigger: GAACCGGGCCAATGGCATGCACACGCTGTGCTTACTCGATATCAAAGTGAAGGAGCAGTCTCTGGAGAACCTCATCAGAGGAAGAAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| CDS CAA 72 bp | ACTTTGATATCGAGTAAGCACAGCGTGTGCATGCCATaGGCCCGGTTCCTCTTCACCTTGTCAAAGAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: TLISSKHSVCMP*ARFLFTLSKKL Trigger: GAGCTTCTTTGACAAGGTGAAGAGGAACCGGGCCAATGGCATGCACACGCTGTGCTTACTCGATATCAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043342.10 ENSMUST00000185098.8 ENSMUST00000189799.7 |
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| CDS CAA 72 bp | CCTCTGATGAGGTTCTCCAGAGACTGCTCCTTCACTTaGATATCGAGTAAGCACAGCGTGTGCATGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: PLMRFSRDCSFT*ISSKHSVCMPL Trigger: CAATGGCATGCACACGCTGTGCTTACTCGATATCAAAGTGAAGGAGCAGTCTCTGGAGAACCTCATCAGAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043342.10 ENSMUST00000189799.7 |
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| CDS CAA 72 bp | CACCTGATGAGGTTCTCCAGAGACTGCTCCTTCACTTaGATATCGAGTAAGCACAGCGTGTGCATGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: HLMRFSRDCSFT*ISSKHSVCMPL Trigger: CAATGGCATGCACACGCTGTGCTTACTCGATATCAAAGTGAAGGAGCAGTCTCTGGAGAACCTCATCAGGTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185098.8 |
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| CDS GCA 72 bp | CCAGGAAACAGAACACACTTCCTTTGTGGCATTACCTaGAAACCACAGCAGCCTACAGCGTTCATTATGGAG | + |
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Preference number: 6 (lower is better) Translates to: PGNRTHFLCGIT*KPQQPTAFIME Trigger: CTCCATAATGAACGCTGTAGGCTGCTGTGGTTTGCAGGTAATGCCACAAAGGAAGTGTGTTCTGTTTCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
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| CDS CAA 72 bp | CAACTTATAGCTTCCAGGAAACAGAACACACTTCCTTaGTGGCATTACCTGCAAACCACAGCAGCCTACAGC | + |
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Preference number: 6 (lower is better) Translates to: QLIASRKQNTLP*WHYLQTTAAYS Trigger: GCTGTAGGCTGCTGTGGTTTGCAGGTAATGCCACAAAGGAAGTGTGTTCTGTTTCCTGGAAGCTATAAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106505.8 |
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