Pregenerated sensors for DPH3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021905Ensembl transcript IDs: ENSMUST00000022461.11, ENSMUST00000067955.12, ENSMUST00000112001.9, ENSMUST00000124303.9
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGCTGGCTGAAGGTGCAGCCCAGTACTGGAGGGCTTGCCCGGCGTaGGCAAGGCTCTGGGTTCAATGCCTTCCCACCTCCCACAAACAA | + |
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Preference number: 1 (lower is better) Translates to: MLAEGAAQYWRACPA*ARLWVQCLPTSHKQ Trigger: TTGTTTGTGGGAGGTGGGAAGGCATTGAACCCAGAGCCTTGCTCACGCCGGGCAAGCCCTCCAGTACTGGGCTGCACCTTCAGCCAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR CCA 90 bp | CAAAGTTTGGGTCCCAGCATCCACGTCAGGTGGCTCCCAACTGCCTaGGACTCCTGCTCCAGGAGATCCATCTTGGGCAACGGTACTCAT | + |
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Preference number: 1 (lower is better) Translates to: QSLGPSIHVRWLPTA*DSCSRRSILGNGTH Trigger: ATGAGTACCGTTGCCCAAGATGGATCTCCTGGAGCAGGAGTCCCAGGCAGTTGGGAGCCACCTGACGTGGATGCTGGGACCCAAACTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR TCA 90 bp | CCCCAGGCAGCTCCTCCTCCCCAGAATCACCTTGCTCTGCCCGTCTaGGCAGTAGCTTCATTCTGTAAGATAATTTGGGAGACACCAAAC | + |
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Preference number: 1 (lower is better) Translates to: PQAAPPPQNHLALPV*AVASFCKIIWETPN Trigger: GTTTGGTGTCTCCCAAATTATCTTACAGAATGAAGCTACTGCTCAGACGGGCAGAGCAAGGTGATTCTGGGGAGGAGGAGCTGCCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR GCA 90 bp | CGTTTGAATGTGGACTCCTGCTCCATTGTGATCACAGAAGACGTCTaGTGTGGAATACAGCAGCAACCGCAGCAGCAGAGACTGCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: RLNVDSCSIVITEDV*CGIQQQPQQQRLLV Trigger: CACCAGCAGTCTCTGCTGCTGCGGTTGCTGCTGTATTCCACAGCAGACGTCTTCTGTGATCACAATGGAGCAGGAGTCCACATTCAAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR GCA 90 bp | TCTGTTCGCGCTCTCTCTCTCCTGGGCCGTTTGAATGTGGACTCCTaGTCCATTGTGATCACAGAAGACGTCTGCTGTGGAATACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: SVRALSLLGRLNVDS*SIVITEDVCCGIQQ Trigger: CTGCTGTATTCCACAGCAGACGTCTTCTGTGATCACAATGGAGCAGGAGTCCACATTCAAACGGCCCAGGAGAGAGAGAGCGCGAACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR TCA 90 bp | ATTGAACACCGGTCCTCTAGAAGAACAGCAAGAACTCTTAACCCATaGGCCATCTCTCCAGCCCCTACTGGCTTGTTTTCAGTTGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: IEHRSSRRTARTLNP*AISPAPTGLFSVAA Trigger: TGCTGCAACTGAAAACAAGCCAGTAGGGGCTGGAGAGATGGCTCATGGGTTAAGAGTTCTTGCTGTTCTTCTAGAGGACCGGTGTTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR TCA 90 bp | GAAACTGTGGTCTTACGGTCTAATACCAGGACTGCACTTGGCGCGTaGAAAGTAACAGAAATGACTGAGAACAGGAACAACGCAGTCACG | + |
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Preference number: 1 (lower is better) Translates to: ETVVLRSNTRTALGA*KVTEMTENRNNAVT Trigger: CGTGACTGCGTTGTTCCTGTTCTCAGTCATTTCTGTTACTTTTCACGCGCCAAGTGCAGTCCTGGTATTAGACCGTAAGACCACAGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR GCA 90 bp | TTGTATGGGTCTTTTGTCTGCATGTATGTCTGTAAACTATGTGCATaGCTGGTATTTATGGAGGGCAGAAGAGGGCATCAGAGTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: LYGSFVCMYVCKLCA*LVFMEGRRGHQSPR Trigger: CCTGGGACTCTGATGCCCTCTTCTGCCCTCCATAAATACCAGGCATGCACATAGTTTACAGACATACATGCAGACAAAAGACCCATACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR CCA 90 bp | ATGGGTCTTTTGTCTGCATGTATGTCTGTAAACTATGTGCATGCCTaGTATTTATGGAGGGCAGAAGAGGGCATCAGAGTCCCAGGAACT | + |
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Preference number: 1 (lower is better) Translates to: MGLLSACMSVNYVHA*YLWRAEEGIRVPGT Trigger: AGTTCCTGGGACTCTGATGCCCTCTTCTGCCCTCCATAAATACCAGGCATGCACATAGTTTACAGACATACATGCAGACAAAAGACCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR TCA 90 bp | GCTGTGTCTGAATGCAGATGTGAATATATTGATGTAGGTCTTCTGTaGACACAAAGGAGGAGTCCCAAGTTCAAAGTCCTCGGGGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: AVSECRCEYIDVGLL*TQRRSPKFKVLGGE Trigger: TTCTCCCCCGAGGACTTTGAACTTGGGACTCCTCCTTTGTGTTCACAGAAGACCTACATCAATATATTCACATCTGCATTCAGACACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR TCA 90 bp | CTGGGTTCAATGCCTTCCCACCTCCCACAAACAAAGGAAGAAATCTaGCATGTACTGTACAACACACTTCAGACAACTTTTAACTTAAGT | + |
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Preference number: 1 (lower is better) Translates to: LGSMPSHLPQTKEEI*HVLYNTLQTTFNLS Trigger: ACTTAAGTTAAAAGTTGTCTGAAGTGTGTTGTACAGTACATGTCAGATTTCTTCCTTTGTTTGTGGGAGGTGGGAAGGCATTGAACCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR CAA 90 bp | GGCACTCATCCCCGGTCTGTTCGCGCTCTCTCTCTCCTGGGCCGTTaGAATGTGGACTCCTGCTCCATTGTGATCACAGAAGACGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: GTHPRSVRALSLLGR*NVDSCSIVITEDVC Trigger: GCAGACGTCTTCTGTGATCACAATGGAGCAGGAGTCCACATTCAAACGGCCCAGGAGAGAGAGAGCGCGAACAGACCGGGGATGAGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR CCA 90 bp | GAAATGACTGAGAACAGGAACAACGCAGTCACGGCAAGCCTAGGTGGCTGGCTGAGCATCCACGTCAGGTaGCTCCCAACTGCCTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: EMTENRNNAVTASLGGWLSIHVR*LPTAWD Trigger: GTCCCAGGCAGTTGGGAGCCACCTGACGTGGATGCT...CAGCCAGCCACCTAGGCTTGCCGTGACTGCGTTGTTCCTGTTCTCAGTCATTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCTACCAGGCACTCATCCCCGGTCTGTTCGCGCTCTCTCTCTCCTGGGCCGTATCACAGAAGACGTCTaGTGTGGAATACAGCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LLPGTHPRSVRALSLLGRITEDV*CGIQQQ Trigger: TTGCTGCTGTATTCCACAGCAGACGTCTTCTGTGAT...ACGGCCCAGGAGAGAGAGAGCGCGAACAGACCGGGGATGAGTGCCTGGTAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR GCA 90 bp | TTTTCAGGGCAGCGGGGGTGCATGTCTGATTTGGGTACCGTTATGTGCAGTCTTCAGGTGGCTCCCAACTaGCTGGGACTCCTGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: FSGQRGCMSDLGTVMCSLQVAPN*LGLLLQ Trigger: CTGGAGCAGGAGTCCCAGGCAGTTGGGAGCCACCTG...AAGACTGCACATAACGGTACCCAAATCAGACATGCACCCCCGCTGCCCTGAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCGGGGGTGCATGTCTGATTTGGGTACCGTTATGTGCAGTCTTCCTAGGTGTACTGCCTGGGACTCCTaGTCCAGGAGATCCATCTTG | + |
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Preference number: 2 (lower is better) Translates to: QRGCMSDLGTVMCSLPRCTAWDS*SRRSIL Trigger: CAAGATGGATCTCCTGGAGCAGGAGTCCCAGGCAGT...ACACCTAGGAAGACTGCACATAACGGTACCCAAATCAGACATGCACCCCCGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR CCA 90 bp | AAACCTCTGACTGAGTCTAACGTCTGGATGCTCTCAGACTGCAGTGCAGACAGTAGCATCCACGTCAGGTaGCTCCCAACTGCCTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: KPLTESNVWMLSDCSADSSIHVR*LPTAWD Trigger: GTCCCAGGCAGTTGGGAGCCACCTGACGTGGATGCT...ACTGTCTGCACTGCAGTCTGAGAGCATCCAGACGTTAGACTCAGTCAGAGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR TCA 90 bp | GTGAACACAAAGGAGGAGTCCCAAGTTCAAAGTCCTCGGGGGAGAAAGCACTCGAGAACTCTTAACCCATaGGCCATCTCTCCAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: VNTKEESQVQSPRGRKHSRTLNP*AISPAP Trigger: AGGGGCTGGAGAGATGGCTCATGGGTTAAGAGTTCT...CGAGTGCTTTCTCCCCCGAGGACTTTGAACTTGGGACTCCTCCTTTGTGTTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR TCA 90 bp | AGCGGGGGTGCATGTCTGATTTGGGTACCGTTATGTGCAGTCTTCCTAGGTGTGGATGTAGGTCTTCTGTaGACACAAAGGAGGAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SGGACLIWVPLCAVFLGVDVGLL*TQRRSP Trigger: GGGACTCCTCCTTTGTGTTCACAGAAGACCTACATC...CACACCTAGGAAGACTGCACATAACGGTACCCAAATCAGACATGCACCCCCGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAGGGCAGCGGGGGTGCATGTCTGATTTGGGTACCGTTATGTGCAGTCTTCTTCCAGTCCCAGTATaGAATCCAGGGCTGGCATGT | + |
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Preference number: 2 (lower is better) Translates to: FSGQRGCMSDLGTVMCSLLPVPV*NPGLAC Trigger: ACATGCCAGCCCTGGATTCCATACTGGGACTGGAAG...AAGACTGCACATAACGGTACCCAAATCAGACATGCACCCCCGCTGCCCTGAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGATGTTTCTAGGAAAGGCCTCACCTGAACCACCTCAGAAACTATGTCAATGGCTCCCAACTGCCTaGGACTCCTGCTCCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: RQMFLGKASPEPPQKLCQWLPTA*DSCSRR Trigger: TCTCCTGGAGCAGGAGTCCCAGGCAGTTGGGAGCCA...TTGACATAGTTTCTGAGGTGGTTCAGGTGAGGCCTTTCCTAGAAACATCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGAGTCCCAGGAACTGGAGCCCCAGATAGTTGTGAGCTGCTATGTGGGTGCTTTCCAGATGTTCAAATaGTGCAGCCGACTGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SESQELEPQIVVSCYVGAFQMFK*CSRLKE Trigger: TTCCTTCAGTCGGCTGCATCATTTGAACATCTGGAA...AGCACCCACATAGCAGCTCACAACTATCTGGGGCTCCAGTTCCTGGGACTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCCCAAGTTCAAAGTCCTCGGGGGAGAAAGCACTCGCAGGAAAGGAAAGGATAGAAGACGTCTGCTGTaGAATACAGCAGCAACCGCA | + |
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Preference number: 2 (lower is better) Translates to: SPKFKVLGGESTRRKGKDRRRLL*NTAATA Trigger: TGCGGTTGCTGCTGTATTCCACAGCAGACGTCTTCT...ATCCTTTCCTTTCCTGCGAGTGCTTTCTCCCCCGAGGACTTTGAACTTGGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCCAGCCCCTACTGGCTTGTTTTCAGTTGCAGCAGCCATATCCCAAACACTCCCAGGAGATCCATCTTaGGCAACGGTACTCATATGC | + |
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Preference number: 2 (lower is better) Translates to: SPAPTGLFSVAAAISQTLPGDPS*ATVLIC Trigger: GCATATGAGTACCGTTGCCCAAGATGGATCTCCTGG...GAGTGTTTGGGATATGGCTGCTGCAACTGAAAACAAGCCAGTAGGGGCTGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR CCA 90 bp | GTGAACACAAAGGAGGAGTCCCAAGTTCAAAGTCCTCGGGGGAGAAAGCACTCGCCGCAAGTGCAGCTCTaGAAAAGGCAGATGTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: VNTKEESQVQSPRGRKHSPQVQL*KRQMFL Trigger: TAGAAACATCTGCCTTTTCCAGAGCTGCACTTGCGG...CGAGTGCTTTCTCCCCCGAGGACTTTGAACTTGGGACTCCTCCTTTGTGTTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR TCA 90 bp | GTGAACACAAAGGAGGAGTCCCAAGTTCAAAGTCCTCGGGGGAGAAAGCACTCGCCAGTCACATCTGAATaGCCTTGGGTTTTTCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: VNTKEESQVQSPRGRKHSPVTSE*PWVFLF Trigger: AAACAGAAAAACCCAAGGTCATTCAGATGTGACTGG...CGAGTGCTTTCTCCCCCGAGGACTTTGAACTTGGGACTCCTCCTTTGTGTTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR GCA 90 bp | AGTCCCAAGTTCAAAGTCCTCGGGGGAGAAAGCACTCGCAGGAAAGGAAAGGATATCACAGAAGACGTCTaGTGTGGAATACAGCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: SPKFKVLGGESTRRKGKDITEDV*CGIQQQ Trigger: TTGCTGCTGTATTCCACAGCAGACGTCTTCTGTGAT...ATCCTTTCCTTTCCTGCGAGTGCTTTCTCCCCCGAGGACTTTGAACTTGGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR CCA 90 bp | CGTGAGCAAGGCTCTGGGTTCAATGCCTTCCCACCTCCCACAAACAAAGGAAGACTAAGGTACCTCACTTaGCTGTTTCCTTTTAACCTG | + |
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Preference number: 2 (lower is better) Translates to: REQGSGFNAFPPPTNKGRLRYLT*LFPFNL Trigger: CAGGTTAAAAGGAAACAGCCAAGTGAGGTACCTTAG...TCTTCCTTTGTTTGTGGGAGGTGGGAAGGCATTGAACCCAGAGCCTTGCTCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCCCAAGTTCAAAGTCCTCGGGGGAGAAAGCACTCGCAGGAAAGGAAAGGATCCAGTCACATCTGAATaGCCTTGGGTTTTTCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: SPKFKVLGGESTRRKGKDPVTSE*PWVFLF Trigger: AAACAGAAAAACCCAAGGTCATTCAGATGTGACTGG...ATCCTTTCCTTTCCTGCGAGTGCTTTCTCCCCCGAGGACTTTGAACTTGGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR TCA 90 bp | AGACTAACGGTGACACAAAACTGTGCCCCGTTACAACCACTACAGATAGGATCAGATGTAGGTCTTCTGTaGACACAAAGGAGGAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: RLTVTQNCAPLQPLQIGSDVGLL*TQRRSP Trigger: GGGACTCCTCCTTTGTGTTCACAGAAGACCTACATC...TGATCCTATCTGTAGTGGTTGTAACGGGGCACAGTTTTGTGTCACCGTTAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCGGGGGAGAAAGCACTCGCAGGAAAGGAAAGGATCCTTTGAACTAGAAACTTCTCAGCCTAATGGCTaGCTAGAACCATACACTGTT | + |
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Preference number: 2 (lower is better) Translates to: PRGRKHSQERKGSFELETSQPNG*LEPYTV Trigger: AACAGTGTATGGTTCTAGGCAGCCATTAGGCTGAGA...AGTTTCTAGTTCAAAGGATCCTTTCCTTTCCTGCGAGTGCTTTCTCCCCCGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGATGTTTCTAGGAAAGGCCTCACCTGAACCACCTCAGAAACTATGTCAACACTTTTATAATGAGTaGGCAGCTAGGACACGTGGC | + |
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Preference number: 2 (lower is better) Translates to: RQMFLGKASPEPPQKLCQHFYNE*AARTRG Trigger: GCCACGTGTCCTAGCTGCTCACTCATTATAAAAGTG...TTGACATAGTTTCTGAGGTGGTTCAGGTGAGGCCTTTCCTAGAAACATCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112001.9 |
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| 3UTR-3UTR GCA 90 bp | CGTGAGCAAGGCTCTGGGTTCAATGCCTTCCCACCTCCCACAAACAAAGGAAGACTTTCCACTCTAAAGTaGGATGCTGTGAAAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: REQGSGFNAFPPPTNKGRLSTLK*DAVKEN Trigger: ATTTTCTTTCACAGCATCGCACTTTAGAGTGGAAAG...TCTTCCTTTGTTTGTGGGAGGTGGGAAGGCATTGAACCCAGAGCCTTGCTCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR GCA 90 bp | CCTCGGGGGAGAAAGCACTCGCAGGAAAGGAAAGGATCCTTTGAACTAGAAACTTGTAAACTATGTGCATaGCTGGTATTTATGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PRGRKHSQERKGSFELETCKLCA*LVFMEG Trigger: GCCCTCCATAAATACCAGGCATGCACATAGTTTACA...AGTTTCTAGTTCAAAGGATCCTTTCCTTTCCTGCGAGTGCTTTCTCCCCCGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR TCA 90 bp | CCATCAGGCCTTTCAAGAAATAAAGGCCCTGATACAGAAATACTTGTTTCCAGCAGGAAAGGCCTCACCTaGACCACCTCAGAAACTATG | + |
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Preference number: 2 (lower is better) Translates to: PSGLSRNKGPDTEILVSSRKGLT*TTSETM Trigger: CATAGTTTCTGAGGTGGTTCAGGTGAGGCCTTTCCT...GCTGGAAACAAGTATTTCTGTATCAGGGCCTTTATTTCTTGAAAGGCCTGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR GCA 90 bp | CAAACACTCTGCTGGATAAGCGGTGGACTTTCAAAAGTATTTTACGTATTCACAACTGCCTGGGACTCCTaGTCCAGGAGATCCATCTTG | + |
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Preference number: 2 (lower is better) Translates to: QTLCWISGGLSKVFYVFTTAWDS*SRRSIL Trigger: CAAGATGGATCTCCTGGAGCAGGAGTCCCAGGCAGT...TGTGAATACGTAAAATACTTTTGAAAGTCCACCGCTTATCCAGCAGAGTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR CCA 90 bp | TACAGAAATACTTGTTTCCAGCTGGCAATACTCACGCACTTTCACTTGGCAAGTAGAAGACGTCTGCTGTaGAATACAGCAGCAACCGCA | + |
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Preference number: 2 (lower is better) Translates to: YRNTCFQLAILTHFHLASRRRLL*NTAATA Trigger: TGCGGTTGCTGCTGTATTCCACAGCAGACGTCTTCT...ACTTGCCAAGTGAAAGTGCGTGAGTATTGCCAGCTGGAAACAAGTATTTCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGAAACGTCTGGGATTCCAGTCACATCTGAATGACCTTGGGTTTTTCTGTCCAGTCACATCTGAATaGCCTTGGGTTTTTCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: LWKRLGFQSHLNDLGFFCPVTSE*PWVFLF Trigger: AAACAGAAAAACCCAAGGTCATTCAGATGTGACTGG...ACAGAAAAACCCAAGGTCATTCAGATGTGACTGGAATCCCAGACGTTTCCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCGGGGGAGAAAGCACTCGCAGGAAAGGAAAGGATCCTTTGAACTAGAAACTACAAAGGAAGAAATCTaGCATGTACTGTACAACACA | + |
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Preference number: 2 (lower is better) Translates to: PRGRKHSQERKGSFELETTKEEI*HVLYNT Trigger: TGTGTTGTACAGTACATGTCAGATTTCTTCCTTTGT...AGTTTCTAGTTCAAAGGATCCTTTCCTTTCCTGCGAGTGCTTTCTCCCCCGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR CCA 90 bp | CAAACACTCTGCTGGATAAGCGGTGGACTTTCAAAAGTATTTTACGTATTCACACTTCCAGTCCCAGTATaGAATCCAGGGCTGGCATGT | + |
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Preference number: 2 (lower is better) Translates to: QTLCWISGGLSKVFYVFTLPVPV*NPGLAC Trigger: ACATGCCAGCCCTGGATTCCATACTGGGACTGGAAG...TGTGAATACGTAAAATACTTTTGAAAGTCCACCGCTTATCCAGCAGAGTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR CCA 90 bp | GATGTTCAAATGATGCAGCCGACTGAAGGAAAAACCACAGTTTATAATAAGGCTCTTCCAGTCCCAGTATaGAATCCAGGGCTGGCATGT | + |
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Preference number: 2 (lower is better) Translates to: DVQMMQPTEGKTTVYNKALPVPV*NPGLAC Trigger: ACATGCCAGCCCTGGATTCCATACTGGGACTGGAAG...AGCCTTATTATAAACTGTGGTTTTTCCTTCAGTCGGCTGCATCATTTGAACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 ENSMUST00000124303.9 |
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| 3UTR-3UTR CCA 90 bp | AACCCATCAGGCCTTTCAAGAAATAAAGGCCCTGATACAGAAATACTTGTTTCCCCAGGAGATCCATCTTaGGCAACGGTACTCATATGC | + |
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Preference number: 2 (lower is better) Translates to: NPSGLSRNKGPDTEILVSPGDPS*ATVLIC Trigger: GCATATGAGTACCGTTGCCCAAGATGGATCTCCTGG...GGAAACAAGTATTTCTGTATCAGGGCCTTTATTTCTTGAAAGGCCTGATGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
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| 3UTR-3UTR CCA 90 bp | AGACTAACGGTGACACAAAACTGTGCCCCGTTACAACCACTACAGATAGGATCAGCTACAGAGAAACTGTaGTCTTACGGTCTAATACCA | + |
|
Preference number: 2 (lower is better) Translates to: RLTVTQNCAPLQPLQIGSATEKL*SYGLIP Trigger: TGGTATTAGACCGTAAGACCACAGTTTCTCTGTAGC...TGATCCTATCTGTAGTGGTTGTAACGGGGCACAGTTTTGTGTCACCGTTAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAAGCTCATCCTGTTGTAGCGTCTGCACTTCTTAAGACTAACGGTGACACAAAGGAAAGGATCCTTTaGACTAGAAACTTTCCACTC | + |
|
Preference number: 2 (lower is better) Translates to: FQAHPVVASALLKTNGDTKERIL*TRNFPL Trigger: GAGTGGAAAGTTTCTAGTTCAAAGGATCCTTTCCTT...TGTGTCACCGTTAGTCTTAAGAAGTGCAGACGCTACAACAGGATGAGCTTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGGCAGATGTTTCTAGGAAAGGCCTCACCTGAACCACCTCAGAAACTATGTTCAAAATGTAATCTTTaGAAAGCTCCCATCACGGGC | + |
|
Preference number: 2 (lower is better) Translates to: KRQMFLGKASPEPPQKLCSKCNL*KAPITG Trigger: GCCCGTGATGGGAGCTTTTCAAAGATTACATTTTGA...ACATAGTTTCTGAGGTGGTTCAGGTGAGGCCTTTCCTAGAAACATCTGCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTCAAGAAATAAAGGCCCTGATACAGAAATACTTGTTTCCAGCTGGCAATACTATGCCAACTGTCAGCTaGGTACTCTGGAAACGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: FQEIKALIQKYLFPAGNTMPTVS*VLWKRL Trigger: CAGACGTTTCCAGAGTACTCAGCTGACAGTTGGCAT...AGTATTGCCAGCTGGAAACAAGTATTTCTGTATCAGGGCCTTTATTTCTTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGCTGGATAAGCGGTGGACTTTCAAAAGTATTTTACGTATTCACAGCAAAGTCAAAATGTAATCTTTaGAAAGCTCCCATCACGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LCWISGGLSKVFYVFTAKSKCNL*KAPITG Trigger: GCCCGTGATGGGAGCTTTTCAAAGATTACATTTTGA...CTTTGCTGTGAATACGTAAAATACTTTTGAAAGTCCACCGCTTATCCAGCAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAGCATCCACGTCAGGTGGCTCCCAACTGCCTGGGACTCCTGCTCCAGGAGTCTCTCCTGGGCCGTTaGAATGTGGACTCCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SQHPRQVAPNCLGLLLQESLLGR*NVDSCS Trigger: GGAGCAGGAGTCCACATTCAAACGGCCCAGGAGAGA...CTCCTGGAGCAGGAGTCCCAGGCAGTTGGGAGCCACCTGACGTGGATGCTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR GCA 72 bp | ATCCACGTCAGGTGGCTCCCAACTGCCTGGGACTCCTaGTCCAGGAGATCCATCTTGGGCAACGGTACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: IHVRWLPTAWDS*SRRSILGNGTH Trigger: ATGAGTACCGTTGCCCAAGATGGATCTCCTGGAGCAGGAGTCCCAGGCAGTTGGGAGCCACCTGACGTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR TCA 72 bp | CGCAGTCACGGCAAGCCTAGGTGGCTGGCTGATGAATaGGCCGCAAGTGCAGCTCTGGAAAAGGCAGATGTT | + |
|
Preference number: 3 (lower is better) Translates to: RSHGKPRWLADE*AASAALEKADV Trigger: AACATCTGCCTTTTCCAGAGCTGCACTTGCGGCTCATTCATCAGCCAGCCACCTAGGCTTGCCGTGACTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR TCA 72 bp | AGACTGCTGGTGAGATCTCCAAAAGCATCGCTCTCATaGGCACAGACCATCTGTTTCCCCAGGCAGCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RLLVRSPKASLS*AQTICFPRQLL Trigger: GAGGAGCTGCCTGGGGAAACAGATGGTCTGTGCTCATGAGAGCGATGCTTTTGGAGATCTCACCAGCAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR TCA 72 bp | CCAGGGCTGGCATGTCATAGGCTCCCTTTTTCATGCTaGGTTCAGTGGCTGATGAAGATCACACCCCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGLACHRLPFSC*VQWLMKITPLR Trigger: CCTCAGGGGTGTGATCTTCATCAGCCACTGAACTCAGCATGAAAAAGGGAGCCTATGACATGCCAGCCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 ENSMUST00000124303.9 |
||
| 3UTR TCA 72 bp | CTGGGCTCAGCCCCCACGGTTCAGGATGTGGGTACCTaGGAGCCTCTTCAGCATTTAACTAACTCCTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LGSAPTVQDVGT*EPLQHLTNSLL Trigger: CAACAAGGAGTTAGTTAAATGCTGAAGAGGCTCTCAGGTACCCACATCCTGAACCGTGGGGGCTGAGCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112001.9 |
||
| 3UTR GCA 72 bp | GTGGACTCCTGCTCCATTGTGATCACAGAAGACGTCTaGTGTGGAATACAGCAGCAACCGCAGCAGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VDSCSIVITEDV*CGIQQQPQQQR Trigger: TCTCTGCTGCTGCGGTTGCTGCTGTATTCCACAGCAGACGTCTTCTGTGATCACAATGGAGCAGGAGTCCAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR GCA 72 bp | GCTCTCTCTCTCCTGGGCCGTTTGAATGTGGACTCCTaGTCCATTGTGATCACAGAAGACGTCTGCTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ALSLLGRLNVDS*SIVITEDVCCG Trigger: TCCACAGCAGACGTCTTCTGTGATCACAATGGAGCAGGAGTCCACATTCAAACGGCCCAGGAGAGAGAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR GCA 72 bp | CAGCGGGGGTGCATGTCTGATTTGGGTACCGTTATGTaGAGTCTTCCTAGGTGTGCCATCACAGGCATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: QRGCMSDLGTVM*SLPRCAITGMS Trigger: AGACATGCCTGTGATGGCACACCTAGGAAGACTGCACATAACGGTACCCAAATCAGACATGCACCCCCGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR CCA 72 bp | CTCCTGCTCCATTGTGATCACAGAAGACGTCTGCTGTaGAATACAGCAGCAACCGCAGCAGCAGAGACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLLHCDHRRRLL*NTAATAAAETA Trigger: AGCAGTCTCTGCTGCTGCGGTTGCTGCTGTATTCCACAGCAGACGTCTTCTGTGATCACAATGGAGCAGGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR CCA 72 bp | GGTGGCTGGCTGATGAATGAGCCGCAAGTGCAGCTCTaGAAAAGGCAGATGTTTCTAGGAAAGGCCTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: GGWLMNEPQVQL*KRQMFLGKASP Trigger: AGGTGAGGCCTTTCCTAGAAACATCTGCCTTTTCCAGAGCTGCACTTGCGGCTCATTCATCAGCCAGCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR TCA 72 bp | GAATACAGCAGCAACCGCAGCAGCAGAGACTGCTGGTaGGATCTCCAAAAGCATCGCTCTCATGAGCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: EYSSNRSSRDCW*DLQKHRSHEHR Trigger: TCTGTGCTCATGAGAGCGATGCTTTTGGAGATCTCACCAGCAGTCTCTGCTGCTGCGGTTGCTGCTGTATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR TCA 72 bp | GACTGCACTTGGCGCGTGAAAAGTAACAGAAATGACTaGGAACAGGAACAACGCAGTCACGGCAAGCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: DCTWRVKSNRND*EQEQRSHGKPR Trigger: CCTAGGCTTGCCGTGACTGCGTTGTTCCTGTTCTCAGTCATTTCTGTTACTTTTCACGCGCCAAGTGCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR TCA 72 bp | GCTCCTCCTCCCCAGAATCACCTTGCTCTGCCCGTCTaGGCAGTAGCTTCATTCTGTAAGATAATTTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: APPPQNHLALPV*AVASFCKIIWE Trigger: CTCCCAAATTATCTTACAGAATGAAGCTACTGCTCAGACGGGCAGAGCAAGGTGATTCTGGGGAGGAGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR GCA 72 bp | AGCCATCTCTCCAGCCCCTACTGGCTTGTTTTCAGTTaGAGCAGCCATATCCCAAACACTCTGCTGGATAAG | + |
|
Preference number: 3 (lower is better) Translates to: SHLSSPYWLVFS*SSHIPNTLLDK Trigger: CTTATCCAGCAGAGTGTTTGGGATATGGCTGCTGCAACTGAAAACAAGCCAGTAGGGGCTGGAGAGATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR TCA 72 bp | ACCACTACAGATAGGATCAGCCTCGCCCGTCTAAGATaGACCCATCAGGCCTTTCAAGAAATAAAGGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TTTDRISLARLR*THQAFQEIKAL Trigger: CAGGGCCTTTATTTCTTGAAAGGCCTGATGGGTTCATCTTAGACGGGCGAGGCTGATCCTATCTGTAGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR CCA 72 bp | TCAGACGGACAATTAGGAATCCTTCCAGTCCCAGTATaGAATCCAGGGCTGGCATGTCATAGGCTCCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SDGQLGILPVPV*NPGLACHRLPF Trigger: AAAAGGGAGCCTATGACATGCCAGCCCTGGATTCCATACTGGGACTGGAAGGATTCCTAATTGTCCGTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 ENSMUST00000124303.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGGCATGTCTTAGAGCCAGCTCACACTTCCAAGCTCATCCTGTTGTAGCGCATTTAACTAACTCCTaGTTGGTTGAAGGTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SQACLRASSHFQAHPVVAHLTNS*LVEGAG Trigger: CCCAGCACCTTCAACCAACAAGGAGTTAGTTAAATG...CGCTACAACAGGATGAGCTTGGAAGTGTGAGCTGGCTCTAAGACATGCCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112001.9 |
||
| 3UTR-3UTR CAA 90 bp | AAACTTTCCACTCTAAAGTGCGATGCTGTGAAAGAAAATGAAGCGTCCACTCATTCTCTCCTGGGCCGTTaGAATGTGGACTCCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KLSTLKCDAVKENEASTHSLLGR*NVDSCS Trigger: GGAGCAGGAGTCCACATTCAAACGGCCCAGGAGAGA...ATGAGTGGACGCTTCATTTTCTTTCACAGCATCGCACTTTAGAGTGGAAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCTGGATAAGCGGTGGACTTTCAAAAGTATTTTACGTATTCACAGCAAAGTCTCTCCTGGGCCGTTaGAATGTGGACTCCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LCWISGGLSKVFYVFTAKSLLGR*NVDSCS Trigger: GGAGCAGGAGTCCACATTCAAACGGCCCAGGAGAGA...CTTTGCTGTGAATACGTAAAATACTTTTGAAAGTCCACCGCTTATCCAGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGGCATGTCTTAGAGCCAGCTCACACTTCCAAGCTCATCCTGTTGTAGCGACTCATAGTTTTGGGTaGACAAAAGGTCTGACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SQACLRASSHFQAHPVVATHSFG*TKGLTR Trigger: CCTTGTCAGACCTTTTGTCAACCCAAAACTATGAGT...CGCTACAACAGGATGAGCTTGGAAGTGTGAGCTGGCTCTAAGACATGCCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAGTCCCAGGAACTGGAGCCCCAGATAGTTGTGAGCTGCTATGTGGGTGCTTCTCATTTTATTAGCTaGGCAATGCAAGTCGTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SESQELEPQIVVSCYVGASHFIS*AMQVVL Trigger: TAGAACGACTTGCATTGCCAAGCTAATAAAATGAGA...AGCACCCACATAGCAGCTCACAACTATCTGGGGCTCCAGTTCCTGGGACTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR TCA 72 bp | GTCTTACGGTCTAATACCAGGACTGCACTTGGCGCGTaGAAAGTAACAGAAATGACTGAGAACAGGAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: VLRSNTRTALGA*KVTEMTENRNN Trigger: GTTGTTCCTGTTCTCAGTCATTTCTGTTACTTTTCACGCGCCAAGTGCAGTCCTGGTATTAGACCGTAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR GCA 72 bp | GTTGACAAAAGGTCTGACAAGGAATCACATCTGAAATaGCAACTGTCAGCTGAGTACTCTGGAAACGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VDKRSDKESHLK*QLSAEYSGNVW Trigger: CCAGACGTTTCCAGAGTACTCAGCTGACAGTTGGCATTTCAGATGTGATTCCTTGTCAGACCTTTTGTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAAGAAATAAAGGCCCTGATACAGAAATACTTGTTTCCAGCTGGCAATACTTCAGGGAACCAAAGTTaGGGTCCCAGCATCCACGTC | + |
|
Preference number: 3 (lower is better) Translates to: FQEIKALIQKYLFPAGNTSGNQS*GPSIHV Trigger: GACGTGGATGCTGGGACCCAAACTTTGGTTCCCTGA...AGTATTGCCAGCTGGAAACAAGTATTTCTGTATCAGGGCCTTTATTTCTTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR TCA 72 bp | TTTGGGTTGACAAAAGGTCTGACAAGGAATCACATCTaGAATGCCAACTGTCAGCTGAGTACTCTGGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: FGLTKGLTRNHI*NANCQLSTLET Trigger: CGTTTCCAGAGTACTCAGCTGACAGTTGGCATTTCAGATGTGATTCCTTGTCAGACCTTTTGTCAACCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR CCA 72 bp | AATAAAGGCCCTGATACAGAAATACTTGTTTCCAGCTaGCAATACTCACGCACTTTCACTTGGCAAGTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: NKGPDTEILVSS*QYSRTFTWQVS Trigger: GCTAACTTGCCAAGTGAAAGTGCGTGAGTATTGCCAGCTGGAAACAAGTATTTCTGTATCAGGGCCTTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR TCA 72 bp | ACTCTGGAAACGTCTGGGATTCCAGTCACATCTGAATaGCCTTGGGTTTTTCTGTTTAATACGGGGTTAATA | + |
|
Preference number: 3 (lower is better) Translates to: TLETSGIPVTSE*PWVFLFNTGLI Trigger: TATTAACCCCGTATTAAACAGAAAAACCCAAGGTCATTCAGATGTGACTGGAATCCCAGACGTTTCCAGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR TCA 72 bp | GAATGCAGATGTGAATATATTGATGTAGGTCTTCTGTaGACACAAAGGAGGAGTCCCAAGTTCAAAGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: ECRCEYIDVGLL*TQRRSPKFKVL Trigger: GAGGACTTTGAACTTGGGACTCCTCCTTTGTGTTCACAGAAGACCTACATCAATATATTCACATCTGCATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR CCA 72 bp | AGCAGCCATATCCCAAACACTCTGCTGGATAAGCGGTaGACTTTCAAAAGTATTTTACGTATTCACAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSHIPNTLLDKR*TFKSILRIHSK Trigger: TTTGCTGTGAATACGTAAAATACTTTTGAAAGTCCACCGCTTATCCAGCAGAGTGTTTGGGATATGGCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| 3UTR-3UTR CAA 90 bp | CCATCAGGCCTTTCAAGAAATAAAGGCCCTGATACAGAAATACTTGTTTCCAGCCTGATACAGAAATACTaGTTTCCAGCTGGCAATACT | + |
|
Preference number: 3 (lower is better) Translates to: PSGLSRNKGPDTEILVSSLIQKY*FPAGNT Trigger: AGTATTGCCAGCTGGAAACAAGTATTTCTGTATCAG...GCTGGAAACAAGTATTTCTGTATCAGGGCCTTTATTTCTTGAAAGGCCTGATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| CDS-3UTR TCA 90 bp | CTCCTACCAGGCACTCATCCCCGGTCTGTTCGCGCTCTCTCTCTCCTGGGCCGTCACTTTTATAATGAGTaGGCAGCTAGGACACGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLPGTHPRSVRALSLLGRHFYNE*AARTRG Trigger: GCCACGTGTCCTAGCTGCTCACTCATTATAAAAGTG...ACGGCCCAGGAGAGAGAGAGCGCGAACAGACCGGGGATGAGTGCCTGGTAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 |
||
| 3UTR CAA 72 bp | CCCCGGTCTGTTCGCGCTCTCTCTCTCCTGGGCCGTTaGAATGTGGACTCCTGCTCCATTGTGATCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRSVRALSLLGR*NVDSCSIVITE Trigger: TTCTGTGATCACAATGGAGCAGGAGTCCACATTCAAACGGCCCAGGAGAGAGAGAGCGCGAACAGACCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 ENSMUST00000112001.9 |
||
| CDS-3UTR TCA 90 bp | ATCGAGGAGGTTGGTAACTCTGCACTGGATCCATCCACCTGGGCTCAGCCCCCATCTCCACACATGAACTaGTCCTTGGTGATGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IEEVGNSALDPSTWAQPPSPHMN*SLVMAK Trigger: CTTTGCCATCACCAAGGATCAGTTCATGTGTGGAGA...TGGGGGCTGAGCCCAGGTGGATGGATCCAGTGCAGAGTTACCAACCTCCTCGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124303.9 |
||
| CDS-3UTR TCA 90 bp | TGTGATCACAGAAGACGTCTGCTGTGGAATACAGCAGCAACCGCAGCAGCAGAGCAAGTGTCATCTTGGTaGTGGCAAAGTTATCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CDHRRRLLWNTAATAAAEQVSSW*WQSYPH Trigger: GTGGGGATAACTTTGCCATCACCAAGATGACACTTG...CTCTGCTGCTGCGGTTGCTGCTGTATTCCACAGCAGACGTCTTCTGTGATCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112001.9 |
||
| CDS-3UTR TCA 90 bp | AAACCTCTGACTGAGTCTAACGTCTGGATGCTCTCAGACTGCAGTGCAGACAGTCACTTTTATAATGAGTaGGCAGCTAGGACACGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPLTESNVWMLSDCSADSHFYNE*AARTRG Trigger: GCCACGTGTCCTAGCTGCTCACTCATTATAAAAGTG...ACTGTCTGCACTGCAGTCTGAGAGCATCCAGACGTTAGACTCAGTCAGAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067955.12 |
||
| CDS-3UTR CCA 90 bp | AACCCATCAGGCCTTTCAAGAAATAAAGGCCCTGATACAGAAATACTTGTTTCCGGGCAAGTCTTTAGTTaGGTAACAACACAAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: NPSGLSRNKGPDTEILVSGQVFS*VTTQRT Trigger: AGTTCTTTGTGTTGTTACCCAACTAAAGACTTGCCC...GGAAACAAGTATTTCTGTATCAGGGCCTTTATTTCTTGAAAGGCCTGATGGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112001.9 |
||
| CDS-3UTR CAA 90 bp | CCGCTCCTACCAGGCACTCATCCCCGGTCTGTTCGCGCTCTCTCTCTCCTGGGCTTTTCCAAATCTTCCTaGGTGATGGCAAAGTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: PLLPGTHPRSVRALSLLGFSKSS*VMAKLS Trigger: GGATAACTTTGCCATCACCAAGGAAGATTTGGAAAA...GCCCAGGAGAGAGAGAGCGCGAACAGACCGGGGATGAGTGCCTGGTAGGAGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 |
||
| CDS-3UTR CAA 90 bp | TCTGCACTGGATCCATCCACCTGGGCTCAGCCCCCACGGTTCAGGATGTGGGTACATTTAACTAACTCCTaGTTGGTTGAAGGTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SALDPSTWAQPPRFRMWVHLTNS*LVEGAG Trigger: CCCAGCACCTTCAACCAACAAGGAGTTAGTTAAATG...TACCCACATCCTGAACCGTGGGGGCTGAGCCCAGGTGGATGGATCCAGTGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000124303.9 |
||
| CDS-3UTR CAA 90 bp | TGGCTGATGAAGATCACACCCCTGAGGCTGCCCATCGAGGAGGTTGGTAACTCTCTAACTCCTTGTTGGTaGAAGGTGCTGGGACTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: WLMKITPLRLPIEEVGNSLTPCW*KVLGLF Trigger: AAACAGTCCCAGCACCTTCAACCAACAAGGAGTTAG...AGAGTTACCAACCTCCTCGATGGGCAGCCTCAGGGGTGTGATCTTCATCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067955.12 ENSMUST00000124303.9 |
||
| CDS-3UTR CAA 90 bp | TCAGAGTCCCAGGAACTGGAGCCCCAGATAGTTGTGAGCTGCTATGTGGGTGCTCTCCCAAGTGTCATCTaGGTGATGGCAAAGTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: SESQELEPQIVVSCYVGALPSVI*VMAKLS Trigger: GGATAACTTTGCCATCACCAAGATGACACTTGGGAG...AGCACCCACATAGCAGCTCACAACTATCTGGGGCTCCAGTTCCTGGGACTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112001.9 |
||
| CDS-3UTR CAA 90 bp | TGTGGAATACAGCAGCAACCGCAGCAGCAGAGACTGCTGGTGAGATCTCCAAAACTAACTCCTTGTTGGTaGAAGGTGCTGGGACTGTTT | + |
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Preference number: 5 (lower is better) Translates to: CGIQQQPQQQRLLVRSPKLTPCW*KVLGLF Trigger: AAACAGTCCCAGCACCTTCAACCAACAAGGAGTTAG...TTTTGGAGATCTCACCAGCAGTCTCTGCTGCTGCGGTTGCTGCTGTATTCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 |
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| CDS-3UTR CAA 90 bp | TCTCCAGCCCCTACTGGCTTGTTTTCAGTTGCAGCAGCCATATCCCAAACACTCCTAACTCCTTGTTGGTaGAAGGTGCTGGGACTGTTT | + |
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Preference number: 5 (lower is better) Translates to: SPAPTGLFSVAAAISQTLLTPCW*KVLGLF Trigger: AAACAGTCCCAGCACCTTCAACCAACAAGGAGTTAG...GAGTGTTTGGGATATGGCTGCTGCAACTGAAAACAAGCCAGTAGGGGCTGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067955.12 |
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| CDS-3UTR CAA 90 bp | TGTGATCACAGAAGACGTCTGCTGTGGAATACAGCAGCAACCGCAGCAGCAGAGCATTTAACTAACTCCTaGTTGGTTGAAGGTGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: CDHRRRLLWNTAATAAAEHLTNS*LVEGAG Trigger: CCCAGCACCTTCAACCAACAAGGAGTTAGTTAAATG...CTCTGCTGCTGCGGTTGCTGCTGTATTCCACAGCAGACGTCTTCTGTGATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 |
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| CDS-3UTR CAA 90 bp | GCTGGTGAGATCTCCAAAAGCATCGCTCTCATGAGCACAGACCATCTGTTTCCCCATTTAACTAACTCCTaGTTGGTTGAAGGTGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: AGEISKSIALMSTDHLFPHLTNS*LVEGAG Trigger: CCCAGCACCTTCAACCAACAAGGAGTTAGTTAAATG...GGGAAACAGATGGTCTGTGCTCATGAGAGCGATGCTTTTGGAGATCTCACCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 |
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| CDS-3UTR CAA 90 bp | TGTGGAATACAGCAGCAACCGCAGCAGCAGAGACTGCTGGTGAGATCTCCAAAATTTTCCAAATCTTCCTaGGTGATGGCAAAGTTATCC | + |
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Preference number: 5 (lower is better) Translates to: CGIQQQPQQQRLLVRSPKFSKSS*VMAKLS Trigger: GGATAACTTTGCCATCACCAAGGAAGATTTGGAAAA...TTTTGGAGATCTCACCAGCAGTCTCTGCTGCTGCGGTTGCTGCTGTATTCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022461.11 ENSMUST00000067955.12 |
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| CDS TCA 72 bp | CAACACAAAGAACTTTCCTCCCAAGTGTCATCTTGGTaGTGGCAAAGTTATCCCCACAGGGGCAAGGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: QHKELSSQVSSW*WQSYPHRGKGR Trigger: TCTACCCTTGCCCCTGTGGGGATAACTTTGCCATCACCAAGATGACACTTGGGAGGAAAGTTCTTTGTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112001.9 |
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