Pregenerated sensors for DPH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028540Ensembl transcript IDs: ENSMUST00000030265.4, ENSMUST00000183773.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCGCAAGTGTGCCAGTGCCTCACGGTGTCGAGCCACACCTAATGTaGCTGCCAGCAGCCCAACCACACGGGCATCTCTGGCCCTCTCTA | + |
|
Preference number: 1 (lower is better) Translates to: SASVPVPHGVEPHLM*LPAAQPHGHLWPSL Trigger: TAGAGAGGGCCAGAGATGCCCGTGTGGTTGGGCTGCTGGCAGGCACATTAGGTGTGGCTCGACACCGTGAGGCACTGGCACACTTGCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR TCA 90 bp | GTGAGCTCGGGGATCCCACTGGCAGGGGAAGAGCTGGGCGGGAGATaGGCAGATCTTGGTACTTTGGGAGCAGGAGCATGGCCAAAGGCT | + |
|
Preference number: 1 (lower is better) Translates to: VSSGIPLAGEELGGR*ADLGTLGAGAWPKA Trigger: AGCCTTTGGCCATGCTCCTGCTCCCAAAGTACCAAGATCTGCTCATCTCCCGCCCAGCTCTTCCCCTGCCAGTGGGATCCCCGAGCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR TCA 90 bp | TGCTCCCCTCATCCTCGTAGGCGATGGCGATACCTCGTCTTCCTCTaGCGGCTTCTTTCACTGGTGTCTGGCCCAAGCGTGGCTCCAGCC | + |
|
Preference number: 1 (lower is better) Translates to: CSPHPRRRWRYLVFL*RLLSLVSGPSVAPA Trigger: GGCTGGAGCCACGCTTGGGCCAGACACCAGTGAAAGAAGCCGTCAGAGGAAGACGAGGTATCGCCATCGCCTACGAGGATGAGGGGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR GCA 90 bp | GGTCTGGATCATCCAACTTCTGCCCCTGACCAAGGGCAGAACTCCTaGACACCAGGAACTGGGATGAGCCCTGGGACCCCTCCCTGCACA | + |
|
Preference number: 1 (lower is better) Translates to: GLDHPTSAPDQGQNS*TPGTGMSPGTPPCT Trigger: TGTGCAGGGAGGGGTCCCAGGGCTCATCCCAGTTCCTGGTGTGCAGGAGTTCTGCCCTTGGTCAGGGGCAGAAGTTGGATGATCCAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR CCA 90 bp | GTAGGCGATGGCGATACCTCGTCTTCCTCTGACGGCTTCTTTCACTaGTGTCTGGCCCAAGCGTGGCTCCAGCCCCTGCCAGTTCCGAGA | + |
|
Preference number: 1 (lower is better) Translates to: VGDGDTSSSSDGFFH*CLAQAWLQPLPVPR Trigger: TCTCGGAACTGGCAGGGGCTGGAGCCACGCTTGGGCCAGACACCAGTGAAAGAAGCCGTCAGAGGAAGACGAGGTATCGCCATCGCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR GCA 90 bp | ACGGCTTCTTTCACTGGTGTCTGGCCCAAGCGTGGCTCCAGCCCCTaGCAGTTCCGAGAACTAAGGAATGAAGCTGCAGGGCTGCTCTCC | + |
|
Preference number: 1 (lower is better) Translates to: TASFTGVWPKRGSSP*QFRELRNEAAGLLS Trigger: GGAGAGCAGCCCTGCAGCTTCATTCCTTAGTTCTCGGAACTGGCAGGGGCTGGAGCCACGCTTGGGCCAGACACCAGTGAAAGAAGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR GCA 90 bp | CCCGGCAGACTTATCACTCTGGCTCTGGCCTCCCAAGGTATCAGCTaGTCCCCTCATCCTCGTAGGCGATGGCGATACCTCGTCTTCCTC | + |
|
Preference number: 1 (lower is better) Translates to: PGRLITLALASQGIS*SPHPRRRWRYLVFL Trigger: GAGGAAGACGAGGTATCGCCATCGCCTACGAGGATGAGGGGAGCAGCTGATACCTTGGGAGGCCAGAGCCAGAGTGATAAGTCTGCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 90 bp | TCTTGGTACTTTGGGAGCAGGAGCATGGCCAAAGGCTCTAGGGCATaGGCACAAGCTGGCTCACTCAGCAGTACCACCGGGGCTGTCGGA | + |
|
Preference number: 1 (lower is better) Translates to: SWYFGSRSMAKGSRA*AQAGSLSSTTGAVG Trigger: TCCGACAGCCCCGGTGGTACTGCTGAGTGAGCCAGCTTGTGCCCATGCCCTAGAGCCTTTGGCCATGCTCCTGCTCCCAAAGTACCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR TCA 90 bp | TGCCTGCCAGCAGCCCAACCACACGGGCATCTCTGGCCCTCTCTATaGGATACAGTCTTCGTGCTCTTAGTCTCCCAGCCTTGGCACCCT | + |
|
Preference number: 1 (lower is better) Translates to: CLPAAQPHGHLWPSL*DTVFVLLVSQPWHP Trigger: AGGGTGCCAAGGCTGGGAGACTAAGAGCACGAAGACTGTATCTCATAGAGAGGGCCAGAGATGCCCGTGTGGTTGGGCTGCTGGCAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR GCA 90 bp | AACTCCTGCACACCAGGAACTGGGATGAGCCCTGGGACCCCTCCCTaGACAGGCTATAAGCTGGACAGCTCCACAGAGAGAGCTACCTAC | + |
|
Preference number: 1 (lower is better) Translates to: NSCTPGTGMSPGTPP*TGYKLDSSTERATY Trigger: GTAGGTAGCTCTCTCTGTGGAGCTGTCCAGCTTATAGCCTGTGCAGGGAGGGGTCCCAGGGCTCATCCCAGTTCCTGGTGTGCAGGAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR CCA 90 bp | CCAGGGGACAGGCTAACAGCACAAAGACGTCCATCTCAGGGAAGTTaGCAAGCTTGGCGGGTGTGGGCTTCCCCACGGCTAACACATAGC | + |
|
Preference number: 1 (lower is better) Translates to: PGDRLTAQRRPSQGS*QAWRVWASPRLTHS Trigger: GCTATGTGTTAGCCGTGGGGAAGCCCACACCCGCCAAGCTTGCCAACTTCCCTGAGATGGACGTCTTTGTGCTGTTAGCCTGTCCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 90 bp | ATGGCGATACCTCGTCTTCCTCTGACGGCTTCTTTCACTGGTGTCTaGCCCAAGCGTGGCTCCAGCCCCTGCCAGTTCCGAGAACTAAGG | + |
|
Preference number: 1 (lower is better) Translates to: MAIPRLPLTASFTGV*PKRGSSPCQFRELR Trigger: CCTTAGTTCTCGGAACTGGCAGGGGCTGGAGCCACGCTTGGGCCAGACACCAGTGAAAGAAGCCGTCAGAGGAAGACGAGGTATCGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 90 bp | GTTGGTCAGGGAGAACAGGTCCCGGCAGACTTATCACTCTGGCTCTaGCCTCCCAAGGTATCAGCTGCTCCCCTCATCCTCGTAGGCGAT | + |
|
Preference number: 1 (lower is better) Translates to: VGQGEQVPADLSLWL*PPKVSAAPLILVGD Trigger: ATCGCCTACGAGGATGAGGGGAGCAGCTGATACCTTGGGAGGCCAGAGCCAGAGTGATAAGTCTGCCGGGACCTGTTCTCCCTGACCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 90 bp | CGAGACGTTGGTCAGGGAGAACAGGTCCCGGCAGACTTATCACTCTaGCTCTGGCCTCCCAAGGTATCAGCTGCTCCCCTCATCCTCGTA | + |
|
Preference number: 1 (lower is better) Translates to: RDVGQGEQVPADLSL*LWPPKVSAAPLILV Trigger: TACGAGGATGAGGGGAGCAGCTGATACCTTGGGAGGCCAGAGCCAGAGTGATAAGTCTGCCGGGACCTGTTCTCCCTGACCAACGTCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR TCA 90 bp | AGGGAGGTGGAAGAACTCTGGTCTGGATCATCCAACTTCTGCCCCTaGCCAAGGGCAGAACTCCTGCACACCAGGAACTGGGATGAGCCC | + |
|
Preference number: 1 (lower is better) Translates to: REVEELWSGSSNFCP*PRAELLHTRNWDEP Trigger: GGGCTCATCCCAGTTCCTGGTGTGCAGGAGTTCTGCCCTTGGTCAGGGGCAGAAGTTGGATGATCCAGACCAGAGTTCTTCCACCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR GCA 90 bp | AACAGGAAAAGAAGGGCCGCCCTGGTGTCCAACCCAAGAGCAGTCTaGTCAGGTCGGGATCAAGGCTGGAGTCCGAGCTTGCTTGAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: NRKRRAALVSNPRAV*SGRDQGWSPSLLEK Trigger: CTTCTCAAGCAAGCTCGGACTCCAGCCTTGATCCCGACCTGAGCAGACTGCTCTTGGGTTGGACACCAGGGCGGCCCTTCTTTTCCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 90 bp | CTGGTGTCCAACCCAAGAGCAGTCTGCTCAGGTCGGGATCAAGGCTaGAGTCCGAGCTTGCTTGAGAAGCCCCTACATAGAAGGCACCAT | + |
|
Preference number: 1 (lower is better) Translates to: LVSNPRAVCSGRDQG*SPSLLEKPLHRRHH Trigger: ATGGTGCCTTCTATGTAGGGGCTTCTCAAGCAAGCTCGGACTCCAGCCTTGATCCCGACCTGAGCAGACTGCTCTTGGGTTGGACACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 90 bp | TTGTGTCTGTCCTGTATCTGGACAACAGGAAAAGAAGGGCCGCCCTaGTGTCCAACCCAAGAGCAGTCTGCTCAGGTCGGGATCAAGGCT | + |
|
Preference number: 1 (lower is better) Translates to: LCLSCIWTTGKEGPP*CPTQEQSAQVGIKA Trigger: AGCCTTGATCCCGACCTGAGCAGACTGCTCTTGGGTTGGACACCAGGGCGGCCCTTCTTTTCCTGTTGTCCAGATACAGGACAGACACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 90 bp | GCACAAAGACGTCCATCTCAGGGAAGTTGGCAAGCTTGGCGGGTGTaGGCTTCCCCACGGCTAACACATAGCTACGTTTTCCAGCAGCTT | + |
|
Preference number: 1 (lower is better) Translates to: AQRRPSQGSWQAWRV*ASPRLTHSYVFQQL Trigger: AAGCTGCTGGAAAACGTAGCTATGTGTTAGCCGTGGGGAAGCCCACACCCGCCAAGCTTGCCAACTTCCCTGAGATGGACGTCTTTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR TCA 90 bp | CATCTGATGACTTCCAAGGAGGTGGTGGTCGGAGCTCCCCAGAAATaGGTGACACATCTGGGGTATCCCACAACTCTGACTCAGGTGGAG | + |
|
Preference number: 1 (lower is better) Translates to: HLMTSKEVVVGAPQK*VTHLGYPTTLTQVE Trigger: CTCCACCTGAGTCAGAGTTGTGGGATACCCCAGATGTGTCACTCATTTCTGGGGAGCTCCGACCACCACCTCCTTGGAAGTCATCAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR GCA 90 bp | CAAGAGCAGTCTGCTCAGGTCGGGATCAAGGCTGGAGTCCGAGCTTaGTTGAGAAGCCCCTACATAGAAGGCACCATATTCTTCCAGACG | + |
|
Preference number: 1 (lower is better) Translates to: QEQSAQVGIKAGVRA*LRSPYIEGTIFFQT Trigger: CGTCTGGAAGAATATGGTGCCTTCTATGTAGGGGCTTCTCAAGCAAGCTCGGACTCCAGCCTTGATCCCGACCTGAGCAGACTGCTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 90 bp | AGGCTAACAGCACAAAGACGTCCATCTCAGGGAAGTTGGCAAGCTTaGCGGGTGTGGGCTTCCCCACGGCTAACACATAGCTACGTTTTC | + |
|
Preference number: 1 (lower is better) Translates to: RLTAQRRPSQGSWQA*RVWASPRLTHSYVF Trigger: GAAAACGTAGCTATGTGTTAGCCGTGGGGAAGCCCACACCCGCCAAGCTTGCCAACTTCCCTGAGATGGACGTCTTTGTGCTGTTAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 90 bp | GAACTAAGGAATGAAGCTGCAGGGCTGCTCTCCGCCAGCTCCAGTTaGGGCCTCGGAATTAAGGCCGAACATCTAGTGTCATCTGATGAC | + |
|
Preference number: 1 (lower is better) Translates to: ELRNEAAGLLSASSS*GLGIKAEHLVSSDD Trigger: GTCATCAGATGACACTAGATGTTCGGCCTTAATTCCGAGGCCCCAACTGGAGCTGGCGGAGAGCAGCCCTGCAGCTTCATTCCTTAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 90 bp | CTCTTGAGTCCCCTTCAGGAGCCTGCTATGAGAGCCAGCTGCACCTaGGGCTCCCTTCACACAATTATATTTCGTGGGGTTATTATTTCC | + |
|
Preference number: 1 (lower is better) Translates to: LLSPLQEPAMRASCT*GSLHTIIFRGVIIS Trigger: GGAAATAATAACCCCACGAAATATAATTGTGTGAAGGGAGCCCCAGGTGCAGCTGGCTCTCATAGCAGGCTCCTGAAGGGGACTCAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR CCA 90 bp | ATGAGATACAGTCTTCGTGCTCTTAGTCTCCCAGCCTTGGCACCCTaGTCTTGTGTCTGTCCTGTATCTGGACAACAGGAAAAGAAGGGC | + |
|
Preference number: 1 (lower is better) Translates to: MRYSLRALSLPALAP*SCVCPVSGQQEKKG Trigger: GCCCTTCTTTTCCTGTTGTCCAGATACAGGACAGACACAAGACCAGGGTGCCAAGGCTGGGAGACTAAGAGCACGAAGACTGTATCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGCAGGGCTGCTCTCCGCCAGCTCCAGTTGGGGCCTCGGAATTAAGGCCGAACCACCAGGAACTGGGATaGGCCCTGGGACCCCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LQGCSPPAPVGASELRPNHQELG*ALGPLP Trigger: AGGGAGGGGTCCCAGGGCTCATCCCAGTTCCTGGTG...GTTCGGCCTTAATTCCGAGGCCCCAACTGGAGCTGGCGGAGAGCAGCCCTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGCCTCACGGTGTCGAGCCACACCTAATGTGCCTGCCAGCAGCCCAACCACACGACCAAGGACAAAGGTaGTGGGCAGCTGCGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VPHGVEPHLMCLPAAQPHDQGQR*WAAARL Trigger: CAGCCTCGCAGCTGCCCATCACCTTTGTCCTTGGTC...GTGTGGTTGGGCTGCTGGCAGGCACATTAGGTGTGGCTCGACACCGTGAGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCTCTGGCCTCCCAAGGTATCAGCTGCTCCCCTCATCCTCGTAGGCGATGGGGCATGGGCACAAGCTaGCTCACTCAGCAGTACCAC | + |
|
Preference number: 2 (lower is better) Translates to: LALASQGISCSPHPRRRWGMGTS*LTQQYH Trigger: GTGGTACTGCTGAGTGAGCCAGCTTGTGCCCATGCC...CCATCGCCTACGAGGATGAGGGGAGCAGCTGATACCTTGGGAGGCCAGAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAAATGAGTGACACATCTGGGGTATCCCACAACTCTGACTCAGGTGGAGGGCAGGGACTCAGGCTGTaGGCTCGGGGATCCCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: PEMSDTSGVSHNSDSGGGQGLRL*ARGSHW Trigger: CCAGTGGGATCCCCGAGCTCACAGCCTGAGTCCCTG...CCCTCCACCTGAGTCAGAGTTGTGGGATACCCCAGATGTGTCACTCATTTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAGCTGCTCCCCTCATCCTCGTAGGCGATGGCGATACCTCGTCTTCCTCTGACGGTATCCCACAACTCTaGCTCAGGTGGAGGGAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SAAPLILVGDGDTSSSSDGIPQL*LRWREW Trigger: CCACTCCCTCCACCTGAGTCAGAGTTGTGGGATACC...GTCAGAGGAAGACGAGGTATCGCCATCGCCTACGAGGATGAGGGGAGCAGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCTCCCAAGGTATCAGCTGCTCCCCTCATCCTCGTAGGCGATGGCGATACCTCCAAGGGCAGAACTCCTaGACACCAGGAACTGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: ASQGISCSPHPRRRWRYLQGQNS*TPGTGM Trigger: CATCCCAGTTCCTGGTGTGCAGGAGTTCTGCCCTTG...GAGGTATCGCCATCGCCTACGAGGATGAGGGGAGCAGCTGATACCTTGGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGGCAGGGTTGCAGGCAGCCTCCAATTCACATGGCGTCAATACAGGCCGAACCATCTCAGGGAAGTTaGCAAGCTTGGCGGGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: ARQGCRQPPIHMASIQAEPSQGS*QAWRVW Trigger: CCACACCCGCCAAGCTTGCCAACTTCCCTGAGATGG...TTCGGCCTGTATTGACGCCATGTGAATTGGAGGCTGCCTGCAACCCTGCCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CAA 90 bp | GTACCACCGGGGCTGTCGGATCTGGGTTCTGGGCTTCAAAGGCCTTaGCACAGAGCTCTAAAGCAACGGGTCGCTGACCAAGGACAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VPPGLSDLGSGLQRP*HRALKQRVADQGQR Trigger: CCTTTGTCCTTGGTCAGCGACCCGTTGCTTTAGAGCTCTGTGCAAAGGCCTTTGAAGCCCAGAACCCAGATCCGACAGCCCCGGTGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCAGGGGAAGAGCTGGGCGGGAGATGAGCAGATCTTGGTACTTTGGGAGCAGGGCACAGGCTATAAGCTaGACAGCTCCACAGAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GRGRAGREMSRSWYFGSRAQAIS*TAPQRE Trigger: CTCTCTCTGTGGAGCTGTCCAGCTTATAGCCTGTGC...CCTGCTCCCAAAGTACCAAGATCTGCTCATCTCCCGCCCAGCTCTTCCCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR GCA 90 bp | TACTCTGCCCAAACTGTCAACAGTGCTGAGGGAGGTGGAAGAACTCTGGTCTGGCCTGGGACCCCTCCCTaGACAGGCTATAAGCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: YSAQTVNSAEGGGRTLVWPGTPP*TGYKLD Trigger: GTCCAGCTTATAGCCTGTGCAGGGAGGGGTCCCAGG...CCAGACCAGAGTTCTTCCACCTCCCTCAGCACTGTTGACAGTTTGGGCAGAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTTATCCTAGCTCAGTTGGGGAGGAAGGGAGGTGTTTCTGTTTCTGTCAGCCTGCACACCAGGAACTaGGATGAGCCCTGGGACCCC | + |
|
Preference number: 2 (lower is better) Translates to: WVILAQLGRKGGVSVSVSLHTRN*DEPWDP Trigger: GGGGTCCCAGGGCTCATCCCAGTTCCTGGTGTGCAG...GCTGACAGAAACAGAAACACCTCCCTTCCTCCCCAACTGAGCTAGGATAACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR CAA 90 bp | GAGCAGTCTGCTCAGGTCGGGATCAAGGCTGGAGTCCGAGCTTGCTaGAGAAGCCCCTACATAGAAGGCACCATATTCTTCCAGACGTCT | + |
|
Preference number: 2 (lower is better) Translates to: EQSAQVGIKAGVRAC*RSPYIEGTIFFQTS Trigger: AGACGTCTGGAAGAATATGGTGCCTTCTATGTAGGGGCTTCTCAAGCAAGCTCGGACTCCAGCCTTGATCCCGACCTGAGCAGACTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CAA 90 bp | CCAAGAGCAGTCTGCTCAGGTCGGGATCAAGGCTGGAGTCCGAGCTaGCTTGAGAAGCCCCTACATAGAAGGCACCATATTCTTCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: PRAVCSGRDQGWSPS*LEKPLHRRHHILPD Trigger: GTCTGGAAGAATATGGTGCCTTCTATGTAGGGGCTTCTCAAGCAAGCTCGGACTCCAGCCTTGATCCCGACCTGAGCAGACTGCTCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTGGTCGGAGCTCCCCAGAAATGAGTGACACATCTGGGGTATCCCACAACTCTACCAGGCAACAGCTCTaGATAATGTGTGAGGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: GGRSSPEMSDTSGVSHNSTRQQL*IMCEVG Trigger: CCCCACCTCACACATTATGCAGAGCTGTTGCCTGGT...AGAGTTGTGGGATACCCCAGATGTGTCACTCATTTCTGGGGAGCTCCGACCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CAA 90 bp | TTCTCTATAAGATCCAGCTTAAGACTCCTCTGTCTGGGTTGCCTCTaGAGTCCCCTTCAGGAGCCTGCTATGAGAGCCAGCTGCACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FSIRSSLRLLCLGCL*SPLQEPAMRASCTW Trigger: CCAGGTGCAGCTGGCTCTCATAGCAGGCTCCTGAAGGGGACTCAAGAGGCAACCCAGACAGAGGAGTCTTAAGCTGGATCTTATAGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR-3UTR CCA 90 bp | TCAGGTCGGGATCAAGGCTGGAGTCCGAGCTTGCTTGAGAAGCCCCTACATAGACAGATCTTGGTACTTTaGGAGCAGGAGCATGGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SGRDQGWSPSLLEKPLHRQILVL*EQEHGQ Trigger: TTGGCCATGCTCCTGCTCCCAAAGTACCAAGATCTG...TCTATGTAGGGGCTTCTCAAGCAAGCTCGGACTCCAGCCTTGATCCCGACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CAA 90 bp | GCCCTCTCTATGAGATACAGTCTTCGTGCTCTTAGTCTCCCAGCCTaGGCACCCTGGTCTTGTGTCTGTCCTGTATCTGGACAACAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ALSMRYSLRALSLPA*APWSCVCPVSGQQE Trigger: TTCCTGTTGTCCAGATACAGGACAGACACAAGACCAGGGTGCCAAGGCTGGGAGACTAAGAGCACGAAGACTGTATCTCATAGAGAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGAATTACTCTGCCCAAACTGTCAACAGTGCTGAGGGAGGTGGAAGAACTCTGTCCAACTTCTGCCCCTaGCCAAGGGCAGAACTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: KNYSAQTVNSAEGGGRTLSNFCP*PRAELL Trigger: CAGGAGTTCTGCCCTTGGTCAGGGGCAGAAGTTGGA...CAGAGTTCTTCCACCTCCCTCAGCACTGTTGACAGTTTGGGCAGAGTAATTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAGCTGCTCCCCTCATCCTCGTAGGCGATGGCGATACCTCGTCTTCCTCTGACAAGTCATGTGTCCAGTaGATATTGTCTTGGACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SAAPLILVGDGDTSSSSDKSCVQ*ILSWTV Trigger: CACTGTCCAAGACAATATTCACTGGACACATGACTT...GTCAGAGGAAGACGAGGTATCGCCATCGCCTACGAGGATGAGGGGAGCAGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR CCA 90 bp | TATAGAGTAGCCTCTGCATTAAAGAATTACTCTGCCCAAACTGTCAACAGTGCTGCTCGGGGATCCCACTaGCAGGGGAAGAGCTGGGCG | + |
|
Preference number: 2 (lower is better) Translates to: YRVASALKNYSAQTVNSAARGSH*QGKSWA Trigger: CGCCCAGCTCTTCCCCTGCCAGTGGGATCCCCGAGC...AGCACTGTTGACAGTTTGGGCAGAGTAATTCTTTAATGCAGAGGCTACTCTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR TCA 90 bp | TATAGAGTAGCCTCTGCATTAAAGAATTACTCTGCCCAAACTGTCAACAGTGCTCACCAGGAACTGGGATaGGCCCTGGGACCCCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: YRVASALKNYSAQTVNSAHQELG*ALGPLP Trigger: AGGGAGGGGTCCCAGGGCTCATCCCAGTTCCTGGTG...AGCACTGTTGACAGTTTGGGCAGAGTAATTCTTTAATGCAGAGGCTACTCTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTGTCTTGGACAGTGCAGGTTTAGACCAGAGGCTCTCAATGAGGAGTAGTTACTCCAACTTCTGCCCCTaGCCAAGGGCAGAACTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: IVLDSAGLDQRLSMRSSYSNFCP*PRAELL Trigger: CAGGAGTTCTGCCCTTGGTCAGGGGCAGAAGTTGGA...GTAACTACTCCTCATTGAGAGCCTCTGGTCTAAACCTGCACTGTCCAAGACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR-3UTR CCA 90 bp | CTAACACATAGCTACGTTTTCCAGCAGCTTCCGTCAGTTTCCGCAAGTGTGCCAGTCGGATCTGGGTTCTaGGCTTCAAAGGCCTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LTHSYVFQQLPSVSASVPVGSGF*ASKAFA Trigger: TGCAAAGGCCTTTGAAGCCCAGAACCCAGATCCGAC...TGGCACACTTGCGGAAACTGACGGAAGCTGCTGGAAAACGTAGCTATGTGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR GCA 90 bp | TATAGAGTAGCCTCTGCATTAAAGAATTACTCTGCCCAAACTGTCAACAGTGCTCCTGGGACCCCTCCCTaGACAGGCTATAAGCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: YRVASALKNYSAQTVNSAPGTPP*TGYKLD Trigger: GTCCAGCTTATAGCCTGTGCAGGGAGGGGTCCCAGG...AGCACTGTTGACAGTTTGGGCAGAGTAATTCTTTAATGCAGAGGCTACTCTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGAATTACTCTGCCCAAACTGTCAACAGTGCTGAGGGAGGTGGAAGAACTCTGGGAAGAACTCTGGTCTaGATCATCCAACTTCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: KNYSAQTVNSAEGGGRTLGRTLV*IIQLLP Trigger: GGGCAGAAGTTGGATGATCCAGACCAGAGTTCTTCC...CAGAGTTCTTCCACCTCCCTCAGCACTGTTGACAGTTTGGGCAGAGTAATTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGTCATGTGTCCAGTGAATATTGTCTTGGACAGTGCAGGTTTAGACCAGAGGGTCGGGATCAAGGCTaGAGTCCGAGCTTGCTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: KSHVSSEYCLGQCRFRPEGRDQG*SPSLLE Trigger: CTCAAGCAAGCTCGGACTCCAGCCTTGATCCCGACC...CTCTGGTCTAAACCTGCACTGTCCAAGACAATATTCACTGGACACATGACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTGCACCTGGGGCTCCCTTCACACAATTATATTTCGTGGGGTTATTATTTCCTAACTGTCAACAGTGCTaGGGGAGGTGGAAGAACTCT | + |
|
Preference number: 2 (lower is better) Translates to: AAPGAPFTQLYFVGLLFPNCQQC*GRWKNS Trigger: AGAGTTCTTCCACCTCCCTCAGCACTGTTGACAGTT...AGGAAATAATAACCCCACGAAATATAATTGTGTGAAGGGAGCCCCAGGTGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR-3UTR CCA 90 bp | TTAAATATAACTCACATATCCACCCACAGGATCTGTGTAGAACAGAGCTTTAGTCTGCACACCAGGAACTaGGATGAGCCCTGGGACCCC | + |
|
Preference number: 2 (lower is better) Translates to: LNITHISTHRICVEQSFSLHTRN*DEPWDP Trigger: GGGGTCCCAGGGCTCATCCCAGTTCCTGGTGTGCAG...ACTAAAGCTCTGTTCTACACAGATCCTGTGGGTGGATATGTGAGTTATATTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR-3UTR TCA 90 bp | TATAGAGTAGCCTCTGCATTAAAGAATTACTCTGCCCAAACTGTCAACAGTGCTCCGAGAACTAAGGAATaGAGCTGCAGGGCTGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: YRVASALKNYSAQTVNSAPRTKE*SCRAAL Trigger: GAGAGCAGCCCTGCAGCTTCATTCCTTAGTTCTCGG...AGCACTGTTGACAGTTTGGGCAGAGTAATTCTTTAATGCAGAGGCTACTCTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR CCA 90 bp | TATAGAGTAGCCTCTGCATTAAAGAATTACTCTGCCCAAACTGTCAACAGTGCTCATCCTCGTAGGCGATaGCGATACCTCGTCTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: YRVASALKNYSAQTVNSAHPRRR*RYLVFL Trigger: GAGGAAGACGAGGTATCGCCATCGCCTACGAGGATG...AGCACTGTTGACAGTTTGGGCAGAGTAATTCTTTAATGCAGAGGCTACTCTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAACAGGAGAAAAAGTATTCCGTTTATTTCAGTGTCTTTGTTGTCCCCAAGAAGCACAGGCTATAAGCTaGACAGCTCCACAGAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: ETGEKVFRLFQCLCCPQEAQAIS*TAPQRE Trigger: CTCTCTCTGTGGAGCTGTCCAGCTTATAGCCTGTGC...TTCTTGGGGACAACAAAGACACTGAAATAAACGGAATACTTTTTCTCCTGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR-3UTR GCA 90 bp | TTAAATATAACTCACATATCCACCCACAGGATCTGTGTAGAACAGAGCTTTAGTTATTGTCTTGGACAGTaGAGGTTTAGACCAGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LNITHISTHRICVEQSFSYCLGQ*RFRPEA Trigger: AGCCTCTGGTCTAAACCTGCACTGTCCAAGACAATA...ACTAAAGCTCTGTTCTACACAGATCCTGTGGGTGGATATGTGAGTTATATTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR-3UTR TCA 90 bp | GAAACAGGAGAAAAAGTATTCCGTTTATTTCAGTGTCTTTGTTGTCCCCAAGAAAAGTCATGTGTCCAGTaGATATTGTCTTGGACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: ETGEKVFRLFQCLCCPQEKSCVQ*ILSWTV Trigger: CACTGTCCAAGACAATATTCACTGGACACATGACTT...TTCTTGGGGACAACAAAGACACTGAAATAAACGGAATACTTTTTCTCCTGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR CAA 90 bp | ACACAATTATATTTCGTGGGGTTATTATTTCCTCCCAAGCACATTTaGAGGACAGTAATCTGGTTAAATATAACTCACATATCCACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: TQLYFVGLLFPPKHI*RTVIWLNITHISTH Trigger: GTGGGTGGATATGTGAGTTATATTTAACCAGATTACTGTCCTCAAAATGTGCTTGGGAGGAAATAATAACCCCACGAAATATAATTGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR GCA 72 bp | GTGCCAGTGCCTCACGGTGTCGAGCCACACCTAATGTaGCTGCCAGCAGCCCAACCACACGGGCATCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VPVPHGVEPHLM*LPAAQPHGHLW Trigger: CCAGAGATGCCCGTGTGGTTGGGCTGCTGGCAGGCACATTAGGTGTGGCTCGACACCGTGAGGCACTGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR GCA 72 bp | AGAAGGGCCGCCCTGGTGTCCAACCCAAGAGCAGTCTaGTCAGGTCGGGATCAAGGCTGGAGTCCGAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: RRAALVSNPRAV*SGRDQGWSPSL Trigger: CAAGCTCGGACTCCAGCCTTGATCCCGACCTGAGCAGACTGCTCTTGGGTTGGACACCAGGGCGGCCCTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 72 bp | GGCGATACCTCGTCTTCCTCTGACGGCTTCTTTCACTaGTGTCTGGCCCAAGCGTGGCTCCAGCCCCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GDTSSSSDGFFH*CLAQAWLQPLP Trigger: TGGCAGGGGCTGGAGCCACGCTTGGGCCAGACACCAGTGAAAGAAGCCGTCAGAGGAAGACGAGGTATCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR TCA 72 bp | GGGATCCCACTGGCAGGGGAAGAGCTGGGCGGGAGATaGGCAGATCTTGGTACTTTGGGAGCAGGAGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: GIPLAGEELGGR*ADLGTLGAGAW Trigger: CCATGCTCCTGCTCCCAAAGTACCAAGATCTGCTCATCTCCCGCCCAGCTCTTCCCCTGCCAGTGGGATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR GCA 72 bp | CATCCAACTTCTGCCCCTGACCAAGGGCAGAACTCCTaGACACCAGGAACTGGGATGAGCCCTGGGACCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HPTSAPDQGQNS*TPGTGMSPGTP Trigger: AGGGGTCCCAGGGCTCATCCCAGTTCCTGGTGTGCAGGAGTTCTGCCCTTGGTCAGGGGCAGAAGTTGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR GCA 72 bp | GAGTGGCACATGGAAGGGAGAACCAGGCAACAGCTCTaGATAATGTGTGAGGTGGGGAGCCAGGCCTGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: EWHMEGRTRQQL*IMCEVGSQAWR Trigger: CCGCCAGGCCTGGCTCCCCACCTCACACATTATGCAGAGCTGTTGCCTGGTTCTCCCTTCCATGTGCCACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 72 bp | GGGCCAGGCAGGGTTGCAGGCAGCCTCCAATTCACATaGCGTCAATACAGGCCGAAAGAAGCCACCCGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GPGRVAGSLQFT*RQYRPKEATRR Trigger: CCTTCGGGTGGCTTCTTTCGGCCTGTATTGACGCCATGTGAATTGGAGGCTGCCTGCAACCCTGCCTGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 72 bp | GGTCAGGGAGAACAGGTCCCGGCAGACTTATCACTCTaGCTCTGGCCTCCCAAGGTATCAGCTGCTCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GQGEQVPADLSL*LWPPKVSAAPL Trigger: GAGGGGAGCAGCTGATACCTTGGGAGGCCAGAGCCAGAGTGATAAGTCTGCCGGGACCTGTTCTCCCTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCCTCACGGTGTCGAGCCACACCTAATGTGCCTGCCAGCAGCCCAACCACACCTTGGCACCCTGGTCTaGTGTCTGTCCTGTATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VPHGVEPHLMCLPAAQPHLGTLV*CLSCIW Trigger: CCAGATACAGGACAGACACAAGACCAGGGTGCCAAG...GTGTGGTTGGGCTGCTGGCAGGCACATTAGGTGTGGCTCGACACCGTGAGGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR GCA 72 bp | ACACCAGGAACTGGGATGAGCCCTGGGACCCCTCCCTaGACAGGCTATAAGCTGGACAGCTCCACAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TPGTGMSPGTPP*TGYKLDSSTER Trigger: TCTCTCTGTGGAGCTGTCCAGCTTATAGCCTGTGCAGGGAGGGGTCCCAGGGCTCATCCCAGTTCCTGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR GCA 72 bp | TTCACTGGTGTCTGGCCCAAGCGTGGCTCCAGCCCCTaGCAGTTCCGAGAACTAAGGAATGAAGCTGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: FTGVWPKRGSSP*QFRELRNEAAG Trigger: CCCTGCAGCTTCATTCCTTAGTTCTCGGAACTGGCAGGGGCTGGAGCCACGCTTGGGCCAGACACCAGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 72 bp | TGGCTCACTCAGCAGTACCACCGGGGCTGTCGGATCTaGGTTCTGGGCTTCAAAGGCCTTTGCACAGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: WLTQQYHRGCRI*VLGFKGLCTEL Trigger: GAGCTCTGTGCAAAGGCCTTTGAAGCCCAGAACCCAGATCCGACAGCCCCGGTGGTACTGCTGAGTGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 72 bp | GGAGAACAGGTCCCGGCAGACTTATCACTCTGGCTCTaGCCTCCCAAGGTATCAGCTGCTCCCCTCATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GEQVPADLSLWL*PPKVSAAPLIL Trigger: GAGGATGAGGGGAGCAGCTGATACCTTGGGAGGCCAGAGCCAGAGTGATAAGTCTGCCGGGACCTGTTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR GCA 72 bp | CTTATCACTCTGGCTCTGGCCTCCCAAGGTATCAGCTaGTCCCCTCATCCTCGTAGGCGATGGCGATACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LITLALASQGIS*SPHPRRRWRYL Trigger: GAGGTATCGCCATCGCCTACGAGGATGAGGGGAGCAGCTGATACCTTGGGAGGCCAGAGCCAGAGTGATAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 72 bp | TCCTGTATCTGGACAACAGGAAAAGAAGGGCCGCCCTaGTGTCCAACCCAAGAGCAGTCTGCTCAGGTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: SCIWTTGKEGPP*CPTQEQSAQVG Trigger: CCCGACCTGAGCAGACTGCTCTTGGGTTGGACACCAGGGCGGCCCTTCTTTTCCTGTTGTCCAGATACAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 72 bp | GCACAAAGACGTCCATCTCAGGGAAGTTGGCAAGCTTaGCGGGTGTGGGCTTCCCCACGGCTAACACATAGC | + |
|
Preference number: 3 (lower is better) Translates to: AQRRPSQGSWQA*RVWASPRLTHS Trigger: GCTATGTGTTAGCCGTGGGGAAGCCCACACCCGCCAAGCTTGCCAACTTCCCTGAGATGGACGTCTTTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 72 bp | AGGCTAACAGCACAAAGACGTCCATCTCAGGGAAGTTaGCAAGCTTGGCGGGTGTGGGCTTCCCCACGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: RLTAQRRPSQGS*QAWRVWASPRL Trigger: TAGCCGTGGGGAAGCCCACACCCGCCAAGCTTGCCAACTTCCCTGAGATGGACGTCTTTGTGCTGTTAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTTCACTGGTGTCTGGCCCAAGCGTGGCTCCAGCCCCTGCCAGTTCCGAGAGGGCTTCAAAGGCCTTaGCACAGAGCTCTAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FFHWCLAQAWLQPLPVPRGLQRP*HRALKQ Trigger: TTGCTTTAGAGCTCTGTGCAAAGGCCTTTGAAGCCC...TCTCGGAACTGGCAGGGGCTGGAGCCACGCTTGGGCCAGACACCAGTGAAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR TCA 72 bp | AAGGCCTTTGCACAGAGCTCTAAAGCAACGGGTCGCTaGCCAAGGACAAAGGTGATGGGCAGCTGCGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KAFAQSSKATGR*PRTKVMGSCEA Trigger: AGCCTCGCAGCTGCCCATCACCTTTGTCCTTGGTCAGCGACCCGTTGCTTTAGAGCTCTGTGCAAAGGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR TCA 72 bp | GCAGCCCAACCACACGGGCATCTCTGGCCCTCTCTATaGGATACAGTCTTCGTGCTCTTAGTCTCCCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: AAQPHGHLWPSL*DTVFVLLVSQP Trigger: AGGCTGGGAGACTAAGAGCACGAAGACTGTATCTCATAGAGAGGGCCAGAGATGCCCGTGTGGTTGGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 72 bp | CGTCCATCTCAGGGAAGTTGGCAAGCTTGGCGGGTGTaGGCTTCCCCACGGCTAACACATAGCTACGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RPSQGSWQAWRV*ASPRLTHSYVF Trigger: GAAAACGTAGCTATGTGTTAGCCGTGGGGAAGCCCACACCCGCCAAGCTTGCCAACTTCCCTGAGATGGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 72 bp | AACCCAAGAGCAGTCTGCTCAGGTCGGGATCAAGGCTaGAGTCCGAGCTTGCTTGAGAAGCCCCTACATAGA | + |
|
Preference number: 3 (lower is better) Translates to: NPRAVCSGRDQG*SPSLLEKPLHR Trigger: TCTATGTAGGGGCTTCTCAAGCAAGCTCGGACTCCAGCCTTGATCCCGACCTGAGCAGACTGCTCTTGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR TCA 72 bp | ACTTCCAAGGAGGTGGTGGTCGGAGCTCCCCAGAAATaGGTGACACATCTGGGGTATCCCACAACTCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: TSKEVVVGAPQK*VTHLGYPTTLT Trigger: AGTCAGAGTTGTGGGATACCCCAGATGTGTCACTCATTTCTGGGGAGCTCCGACCACCACCTCCTTGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR GCA 72 bp | TCTGCTCAGGTCGGGATCAAGGCTGGAGTCCGAGCTTaGTTGAGAAGCCCCTACATAGAAGGCACCATATTC | + |
|
Preference number: 3 (lower is better) Translates to: SAQVGIKAGVRA*LRSPYIEGTIF Trigger: GAATATGGTGCCTTCTATGTAGGGGCTTCTCAAGCAAGCTCGGACTCCAGCCTTGATCCCGACCTGAGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CCA 72 bp | TACATAGAAGGCACCATATTCTTCCAGACGTCTCCCTaGATTCAGGGGGAAGCAGCGCCCAAAACGCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: YIEGTIFFQTSP*IQGEAAPKTLQ Trigger: CTGGAGCGTTTTGGGCGCTGCTTCCCCCTGAATCCAGGGAGACGTCTGGAAGAATATGGTGCCTTCTATGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR GCA 72 bp | TTGAGTCCCCTTCAGGAGCCTGCTATGAGAGCCAGCTaGACCTGGGGCTCCCTTCACACAATTATATTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: LSPLQEPAMRAS*TWGSLHTIIFR Trigger: ACGAAATATAATTGTGTGAAGGGAGCCCCAGGTGCAGCTGGCTCTCATAGCAGGCTCCTGAAGGGGACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR CCA 72 bp | AGTCTTCGTGCTCTTAGTCTCCCAGCCTTGGCACCCTaGTCTTGTGTCTGTCCTGTATCTGGACAACAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLRALSLPALAP*SCVCPVSGQQE Trigger: TTCCTGTTGTCCAGATACAGGACAGACACAAGACCAGGGTGCCAAGGCTGGGAGACTAAGAGCACGAAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAATTACTCTGCCCAAACTGTCAACAGTGCTGAGGGAGGTGGAAGAACTCTGGTTATCCTAGCTCAGTaGGGGAGGAAGGGAGGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KNYSAQTVNSAEGGGRTLVILAQ*GRKGGV Trigger: AACACCTCCCTTCCTCCCCAACTGAGCTAGGATAAC...CAGAGTTCTTCCACCTCCCTCAGCACTGTTGACAGTTTGGGCAGAGTAATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR GCA 72 bp | TCTATAAGATCCAGCTTAAGACTCCTCTGTCTGGGTTaGCTCTTGAGTCCCCTTCAGGAGCCTGCTATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SIRSSLRLLCLG*LLSPLQEPAMR Trigger: TCTCATAGCAGGCTCCTGAAGGGGACTCAAGAGGCAACCCAGACAGAGGAGTCTTAAGCTGGATCTTATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGTCATGTGTCCAGTGAATATTGTCTTGGACAGTGCAGGTTTAGACCAGAGGTTATCCTAGCTCAGTaGGGGAGGAAGGGAGGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KSHVSSEYCLGQCRFRPEVILAQ*GRKGGV Trigger: AACACCTCCCTTCCTCCCCAACTGAGCTAGGATAAC...CTCTGGTCTAAACCTGCACTGTCCAAGACAATATTCACTGGACACATGACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAATTACTCTGCCCAAACTGTCAACAGTGCTGAGGGAGGTGGAAGAACTCTGCCTCCCAAGCACATTTaGAGGACAGTAATCTGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: KNYSAQTVNSAEGGGRTLPPKHI*RTVIWL Trigger: TAACCAGATTACTGTCCTCAAAATGTGCTTGGGAGG...CAGAGTTCTTCCACCTCCCTCAGCACTGTTGACAGTTTGGGCAGAGTAATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGTGTTTCTGTTTCTGTCAGCTGAACCTATACATCCTTCTCTATATAGAGCCAGTGAATATTGTCTaGGACAGTGCAGGTTTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GRCFCFCQLNLYILLYIEPVNIV*DSAGLD Trigger: GTCTAAACCTGCACTGTCCAAGACAATATTCACTGG...CTCTATATAGAGAAGGATGTATAGGTTCAGCTGACAGAAACAGAAACACCTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR-3UTR CAA 90 bp | TATAGAGTAGCCTCTGCATTAAAGAATTACTCTGCCCAAACTGTCAACAGTGCTATTTCAGTGTCTTTGTaGTCCCCAAGAAACAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: YRVASALKNYSAQTVNSAISVSL*SPRNKS Trigger: AGACTTGTTTCTTGGGGACAACAAAGACACTGAAAT...AGCACTGTTGACAGTTTGGGCAGAGTAATTCTTTAATGCAGAGGCTACTCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTATATAGAGTAGCCTCTGCATTAAAGAATTACTCTGCCCAAACTGTCAACTTTATTTCAGTGTCTTaGTTGTCCCCAAGAAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLYRVASALKNYSAQTVNFISVS*LSPRNK Trigger: CTTGTTTCTTGGGGACAACAAAGACACTGAAATAAA...GTTGACAGTTTGGGCAGAGTAATTCTTTAATGCAGAGGCTACTCTATATAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| CDS-3UTR TCA 90 bp | GGGCACAAGCTGGCTCACTCAGCAGTACCACCGGGGCTGTCGGATCTGGGTTCTAAGTGCACAAGGGCTTaGGCTCCAGCCTGCTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GHKLAHSAVPPGLSDLGSKCTRA*APACSA Trigger: CGCCGAGCAGGCTGGAGCTCAAGCCCTTGTGCACTT...AGAACCCAGATCCGACAGCCCCGGTGGTACTGCTGAGTGAGCCAGCTTGTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAGTCCCCTTCAGGAGCCTGCTATGAGAGCCAGCTGCACCTGGGGCTCCCTGGGGCCAGGCAGGGTTaGAGGCAGCCTCCAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LESPSGACYESQLHLGLPGARQG*RQPPIH Trigger: GTGAATTGGAGGCTGCCTGCAACCCTGCCTGGCCCC...AGGGAGCCCCAGGTGCAGCTGGCTCTCATAGCAGGCTCCTGAAGGGGACTCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CCA 90 bp | GGAAGAACTCTGGTCTGGATCATCCAACTTCTGCCCCTGACCAAGGGCAGAACTGTGGGGAGCCAGGCCTaGCGGGGGCCAGGCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRTLVWIIQLLPLTKGRTVGSQA*RGPGRV Trigger: AACCCTGCCTGGCCCCCGCCAGGCCTGGCTCCCCAC...AGTTCTGCCCTTGGTCAGGGGCAGAAGTTGGATGATCCAGACCAGAGTTCTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CCA 90 bp | CTTGAGTCCCCTTCAGGAGCCTGCTATGAGAGCCAGCTGCACCTGGGGCTCCCTGGTCGGGATCAAGGCTaGAGTCCGAGCTTGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LESPSGACYESQLHLGLPGRDQG*SPSLLE Trigger: CTCAAGCAAGCTCGGACTCCAGCCTTGATCCCGACC...AGGGAGCCCCAGGTGCAGCTGGCTCTCATAGCAGGCTCCTGAAGGGGACTCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR TCA 90 bp | CTTGAGTCCCCTTCAGGAGCCTGCTATGAGAGCCAGCTGCACCTGGGGCTCCCTCCGAGAACTAAGGAATaGAGCTGCAGGGCTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LESPSGACYESQLHLGLPPRTKE*SCRAAL Trigger: GAGAGCAGCCCTGCAGCTTCATTCCTTAGTTCTCGG...AGGGAGCCCCAGGTGCAGCTGGCTCTCATAGCAGGCTCCTGAAGGGGACTCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR CAA 72 bp | CAGGCTAACAGCACAAAGACGTCCATCTCAGGGAAGTaGGCAAGCTTGGCGGGTGTGGGCTTCCCCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QANSTKTSISGK*ASLAGVGFPTA Trigger: AGCCGTGGGGAAGCCCACACCCGCCAAGCTTGCCAACTTCCCTGAGATGGACGTCTTTGTGCTGTTAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCCTGCACAGGCTATAAGCTGGACAGCTCCACAGAGAGAGCTACCTACACTAAGTGCACAAGGGCTTaGGCTCCAGCCTGCTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PPCTGYKLDSSTERATYTKCTRA*APACSA Trigger: CGCCGAGCAGGCTGGAGCTCAAGCCCTTGTGCACTT...AGTGTAGGTAGCTCTCTCTGTGGAGCTGTCCAGCTTATAGCCTGTGCAGGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGTCCCCTTCAGGAGCCTGCTATGAGAGCCAGCTGCACCTGGGGCTCCCTGGAGCTCCCCAGAAATaGGTGACACATCTGGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LESPSGACYESQLHLGLPGAPQK*VTHLGY Trigger: ATACCCCAGATGTGTCACTCATTTCTGGGGAGCTCC...AGGGAGCCCCAGGTGCAGCTGGCTCTCATAGCAGGCTCCTGAAGGGGACTCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR GCA 90 bp | TCAGGGAGAACAGGTCCCGGCAGACTTATCACTCTGGCTCTGGCCTCCCAAGGTATGAAGCTGCAGGGCTaGTCTCCGCCAGCTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGRTGPGRLITLALASQGMKLQG*SPPAPV Trigger: AACTGGAGCTGGCGGAGAGCAGCCCTGCAGCTTCAT...ACCTTGGGAGGCCAGAGCCAGAGTGATAAGTCTGCCGGGACCTGTTCTCCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACAGGCTATAAGCTGGACAGCTCCACAGAGAGAGCTACCTACACTCCCGGCATGGGCACAAGCTaGCTCACTCAGCAGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PCTGYKLDSSTERATYTPGMGTS*LTQQYH Trigger: GTGGTACTGCTGAGTGAGCCAGCTTGTGCCCATGCC...GGGAGTGTAGGTAGCTCTCTCTGTGGAGCTGTCCAGCTTATAGCCTGTGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR TCA 90 bp | AAGAACTCTGGTCTGGATCATCCAACTTCTGCCCCTGACCAAGGGCAGAACTCCGCTCTGCATAATGTGTaGGGTGGGGAGCCAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNSGLDHPTSAPDQGQNSALHNV*GGEPGL Trigger: CAGGCCTGGCTCCCCACCTCACACATTATGCAGAGC...GGAGTTCTGCCCTTGGTCAGGGGCAGAAGTTGGATGATCCAGACCAGAGTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CCA 90 bp | AAGAACTCTGGTCTGGATCATCCAACTTCTGCCCCTGACCAAGGGCAGAACTCCGGAAGTTGGCAAGCTTaGCGGGTGTGGGCTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KNSGLDHPTSAPDQGQNSGSWQA*RVWASP Trigger: TGGGGAAGCCCACACCCGCCAAGCTTGCCAACTTCC...GGAGTTCTGCCCTTGGTCAGGGGCAGAAGTTGGATGATCCAGACCAGAGTTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR GCA 90 bp | AAGAACTCTGGTCTGGATCATCCAACTTCTGCCCCTGACCAAGGGCAGAACTCCGAGCCACACCTAATGTaGCTGCCAGCAGCCCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KNSGLDHPTSAPDQGQNSEPHLM*LPAAQP Trigger: TGGTTGGGCTGCTGGCAGGCACATTAGGTGTGGCTC...GGAGTTCTGCCCTTGGTCAGGGGCAGAAGTTGGATGATCCAGACCAGAGTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CCA 90 bp | GCTGCACCTGGGGCTCCCTTCACACAATTATATTTCGTGGGGTTATTATTTCCTGCTCGGGGATCCCACTaGCAGGGGAAGAGCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AAPGAPFTQLYFVGLLFPARGSH*QGKSWA Trigger: CGCCCAGCTCTTCCCCTGCCAGTGGGATCCCCGAGC...AGGAAATAATAACCCCACGAAATATAATTGTGTGAAGGGAGCCCCAGGTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CCA 90 bp | TACTCTGCCCAAACTGTCAACAGTGCTGAGGGAGGTGGAAGAACTCTGGTCTGGCTCAGGTGGAGGGAGTaGCACATGGAAGGGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: YSAQTVNSAEGGGRTLVWLRWRE*HMEGRT Trigger: GGTTCTCCCTTCCATGTGCCACTCCCTCCACCTGAG...CCAGACCAGAGTTCTTCCACCTCCCTCAGCACTGTTGACAGTTTGGGCAGAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR CAA 72 bp | AGATCCAGCTTAAGACTCCTCTGTCTGGGTTGCCTCTaGAGTCCCCTTCAGGAGCCTGCTATGAGAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSSLRLLCLGCL*SPLQEPAMRAS Trigger: GCTGGCTCTCATAGCAGGCTCCTGAAGGGGACTCAAGAGGCAACCCAGACAGAGGAGTCTTAAGCTGGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CCA 90 bp | TGGGTTATCCTAGCTCAGTTGGGGAGGAAGGGAGGTGTTTCTGTTTCTGTCAGCGGAGGGAGTGGCACATaGAAGGGAGAACCAGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: WVILAQLGRKGGVSVSVSGGSGT*KGEPGN Trigger: GTTGCCTGGTTCTCCCTTCCATGTGCCACTCCCTCC...GCTGACAGAAACAGAAACACCTCCCTTCCTCCCCAACTGAGCTAGGATAACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CCA 90 bp | AAGAACTCTGGTCTGGATCATCCAACTTCTGCCCCTGACCAAGGGCAGAACTCCCATCCTCGTAGGCGATaGCGATACCTCGTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KNSGLDHPTSAPDQGQNSHPRRR*RYLVFL Trigger: GAGGAAGACGAGGTATCGCCATCGCCTACGAGGATG...GGAGTTCTGCCCTTGGTCAGGGGCAGAAGTTGGATGATCCAGACCAGAGTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR CAA 72 bp | GCTCAGGTCGGGATCAAGGCTGGAGTCCGAGCTTGCTaGAGAAGCCCCTACATAGAAGGCACCATATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AQVGIKAGVRAC*RSPYIEGTIFF Trigger: GAAGAATATGGTGCCTTCTATGTAGGGGCTTCTCAAGCAAGCTCGGACTCCAGCCTTGATCCCGACCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| 3UTR CAA 72 bp | GTCTGCTCAGGTCGGGATCAAGGCTGGAGTCCGAGCTaGCTTGAGAAGCCCCTACATAGAAGGCACCATATT | + |
|
Preference number: 4 (lower is better) Translates to: VCSGRDQGWSPS*LEKPLHRRHHI Trigger: AATATGGTGCCTTCTATGTAGGGGCTTCTCAAGCAAGCTCGGACTCCAGCCTTGATCCCGACCTGAGCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| CDS-3UTR TCA 90 bp | AAGAATTACTCTGCCCAAACTGTCAACAGTGCTGAGGGAGGTGGAAGAACTCTGGGTCTTCAGGAGGAGTaGACTGTCCTGGAACGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KNYSAQTVNSAEGGGRTLGLQEE*TVLERP Trigger: CGGGCGTTCCAGGACAGTTCACTCCTCCTGAAGACC...CAGAGTTCTTCCACCTCCCTCAGCACTGTTGACAGTTTGGGCAGAGTAATTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGAACTCTGGTCTGGATCATCCAACTTCTGCCCCTGACCAAGGGCAGAACTACCAGGCAACAGCTCTaGATAATGTGTGAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRTLVWIIQLLPLTKGRTTRQQL*IMCEVG Trigger: CCCCACCTCACACATTATGCAGAGCTGTTGCCTGGT...AGTTCTGCCCTTGGTCAGGGGCAGAAGTTGGATGATCCAGACCAGAGTTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR GCA 90 bp | AAGAATTACTCTGCCCAAACTGTCAACAGTGCTGAGGGAGGTGGAAGAACTCTGCGTGGCTCCAGCCCCTaGCAGTTCCGAGAACTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNYSAQTVNSAEGGGRTLRGSSP*QFRELR Trigger: CCTTAGTTCTCGGAACTGGCAGGGGCTGGAGCCACG...CAGAGTTCTTCCACCTCCCTCAGCACTGTTGACAGTTTGGGCAGAGTAATTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACAGGCTATAAGCTGGACAGCTCCACAGAGAGAGCTACCTACACTCCCGCATCTCCTAGTAACTaGTCAGGGAACTGCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PCTGYKLDSSTERATYTPASPSN*SGNCKV Trigger: GACTTTGCAGTTCCCTGACCAGTTACTAGGAGATGC...GGGAGTGTAGGTAGCTCTCTCTGTGGAGCTGTCCAGCTTATAGCCTGTGCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCATGTGTCCAGTGAATATTGTCTTGGACAGTGCAGGTTTAGACCAGAGCAGGGACTCAGGCTGTaGGCTCGGGGATCCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSHVSSEYCLGQCRFRPEQGLRL*ARGSHW Trigger: CCAGTGGGATCCCCGAGCTCACAGCCTGAGTCCCTG...CTCTGGTCTAAACCTGCACTGTCCAAGACAATATTCACTGGACACATGACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR TCA 90 bp | AAGAATTACTCTGCCCAAACTGTCAACAGTGCTGAGGGAGGTGGAAGAACTCTGGGTATCCCACAACTCTaGCTCAGGTGGAGGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNYSAQTVNSAEGGGRTLGIPQL*LRWREW Trigger: CCACTCCCTCCACCTGAGTCAGAGTTGTGGGATACC...CAGAGTTCTTCCACCTCCCTCAGCACTGTTGACAGTTTGGGCAGAGTAATTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR GCA 90 bp | ATTGTCTTGGACAGTGCAGGTTTAGACCAGAGGCTCTCAATGAGGAGTAGTTACCAGTTTCCGCAAGTGTaGCAGTGCCTCACGGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: IVLDSAGLDQRLSMRSSYQFPQV*QCLTVS Trigger: CGACACCGTGAGGCACTGGCACACTTGCGGAAACTG...GTAACTACTCCTCATTGAGAGCCTCTGGTCTAAACCTGCACTGTCCAAGACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| 3UTR CAA 72 bp | ATGAGATACAGTCTTCGTGCTCTTAGTCTCCCAGCCTaGGCACCCTGGTCTTGTGTCTGTCCTGTATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MRYSLRALSLPA*APWSCVCPVSG Trigger: TCCAGATACAGGACAGACACAAGACCAGGGTGCCAAGGCTGGGAGACTAAGAGCACGAAGACTGTATCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| CDS-3UTR CCA 90 bp | ATTGTCTTGGACAGTGCAGGTTTAGACCAGAGGCTCTCAATGAGGAGTAGTTACCCAGCCTTGGCACCCTaGTCTTGTGTCTGTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IVLDSAGLDQRLSMRSSYPALAP*SCVCPV Trigger: TACAGGACAGACACAAGACCAGGGTGCCAAGGCTGG...GTAACTACTCCTCATTGAGAGCCTCTGGTCTAAACCTGCACTGTCCAAGACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CCA 90 bp | GGGAGGTGTTTCTGTTTCTGTCAGCTGAACCTATACATCCTTCTCTATATAGAGAAAGAAGGGCCGCCCTaGTGTCCAACCCAAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRCFCFCQLNLYILLYIEKEGPP*CPTQEQ Trigger: CTGCTCTTGGGTTGGACACCAGGGCGGCCCTTCTTT...CTCTATATAGAGAAGGATGTATAGGTTCAGCTGACAGAAACAGAAACACCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR TCA 90 bp | TCTCTATATAGAGTAGCCTCTGCATTAAAGAATTACTCTGCCCAAACTGTCAACGACCAAGGACAAAGGTaGTGGGCAGCTGCGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLYRVASALKNYSAQTVNDQGQR*WAAARL Trigger: CAGCCTCGCAGCTGCCCATCACCTTTGTCCTTGGTC...GTTGACAGTTTGGGCAGAGTAATTCTTTAATGCAGAGGCTACTCTATATAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR TCA 90 bp | GAAACAGGAGAAAAAGTATTCCGTTTATTTCAGTGTCTTTGTTGTCCCCAAGAAGGTCTTCAGGAGGAGTaGACTGTCCTGGAACGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ETGEKVFRLFQCLCCPQEGLQEE*TVLERP Trigger: CGGGCGTTCCAGGACAGTTCACTCCTCCTGAAGACC...TTCTTGGGGACAACAAAGACACTGAAATAAACGGAATACTTTTTCTCCTGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCATGTGTCCAGTGAATATTGTCTTGGACAGTGCAGGTTTAGACCAGAGCATCCACACAGCAGCTaGCATAAGCTGTGTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KSHVSSEYCLGQCRFRPEHPHSS*HKLCPL Trigger: TAGGGGACACAGCTTATGGCAGCTGCTGTGTGGATG...CTCTGGTCTAAACCTGCACTGTCCAAGACAATATTCACTGGACACATGACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CCA 90 bp | GGGAGGTGTTTCTGTTTCTGTCAGCTGAACCTATACATCCTTCTCTATATAGAGGTCGGATCTGGGTTCTaGGCTTCAAAGGCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRCFCFCQLNLYILLYIEVGSGF*ASKAFA Trigger: TGCAAAGGCCTTTGAAGCCCAGAACCCAGATCCGAC...CTCTATATAGAGAAGGATGTATAGGTTCAGCTGACAGAAACAGAAACACCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CCA 90 bp | GAAACAGGAGAAAAAGTATTCCGTTTATTTCAGTGTCTTTGTTGTCCCCAAGAATGGCAGGGGAAGAGCTaGGCGGGAGATGAGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: ETGEKVFRLFQCLCCPQEWQGKS*AGDEQI Trigger: GATCTGCTCATCTCCCGCCCAGCTCTTCCCCTGCCA...TTCTTGGGGACAACAAAGACACTGAAATAAACGGAATACTTTTTCTCCTGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR TCA 90 bp | TATAGAGTAGCCTCTGCATTAAAGAATTACTCTGCCCAAACTGTCAACAGTGCTCTCTGGCCCTCTCTATaGGATACAGTCTTCGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YRVASALKNYSAQTVNSALWPSL*DTVFVL Trigger: GAGCACGAAGACTGTATCTCATAGAGAGGGCCAGAG...AGCACTGTTGACAGTTTGGGCAGAGTAATTCTTTAATGCAGAGGCTACTCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CCA 90 bp | TTCACACAATTATATTTCGTGGGGTTATTATTTCCTCCCAAGCACATTTTGAGGCCATCTCAGGGAAGTTaGCAAGCTTGGCGGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTQLYFVGLLFPPKHILRPSQGS*QAWRVW Trigger: CCACACCCGCCAAGCTTGCCAACTTCCCTGAGATGG...CCTCAAAATGTGCTTGGGAGGAAATAATAACCCCACGAAATATAATTGTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CCA 90 bp | TATAGAGTAGCCTCTGCATTAAAGAATTACTCTGCCCAAACTGTCAACAGTGCTCAGATCTTGGTACTTTaGGAGCAGGAGCATGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YRVASALKNYSAQTVNSAQILVL*EQEHGQ Trigger: TTGGCCATGCTCCTGCTCCCAAAGTACCAAGATCTG...AGCACTGTTGACAGTTTGGGCAGAGTAATTCTTTAATGCAGAGGCTACTCTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS CCA 90 bp | CAGCTCATACACGCGGTCCAGGTCTTCAGGAGGAGTGAACTGTCCTaGAACGCCCGCCTCCCGTTGCAGGGCTGCCTCCGCAGGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLIHAVQVFRRSELS*NARLPLQGCLRRAA Trigger: AGCAGCCCTGCGGAGGCAGCCCTGCAACGGGAGGCGGGCGTTCCAGGACAGTTCACTCCTCCTGAAGACCTGGACCGCGTGTATGAGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGGCTGCTCTCCGCCAGCTCCAGTTGGGGCCTCGGAATTAAGGCCGAACATGAAGTGCACAAGGGCTaGAGCTCCAGCCTGCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGLLSASSSWGLGIKAEHEVHKG*SSSLLG Trigger: GCCGAGCAGGCTGGAGCTCAAGCCCTTGTGCACTTC...ATGTTCGGCCTTAATTCCGAGGCCCCAACTGGAGCTGGCGGAGAGCAGCCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183773.2 |
||
| CDS-3UTR CAA 90 bp | AAGAACTCTGGTCTGGATCATCCAACTTCTGCCCCTGACCAAGGGCAGAACTCCGGGAAGTTGGCAAGCTaGGCGGGTGTGGGCTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KNSGLDHPTSAPDQGQNSGKLAS*AGVGFP Trigger: GGGGAAGCCCACACCCGCCAAGCTTGCCAACTTCCC...GGAGTTCTGCCCTTGGTCAGGGGCAGAAGTTGGATGATCCAGACCAGAGTTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CAA 90 bp | CCTCCCTGCACAGGCTATAAGCTGGACAGCTCCACAGAGAGAGCTACCTACACTTCCATCTCAGGGAAGTaGGCAAGCTTGGCGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PPCTGYKLDSSTERATYTSISGK*ASLAGV Trigger: CACACCCGCCAAGCTTGCCAACTTCCCTGAGATGGA...AGTGTAGGTAGCTCTCTCTGTGGAGCTGTCCAGCTTATAGCCTGTGCAGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CAA 90 bp | CCTCCCTGCACAGGCTATAAGCTGGACAGCTCCACAGAGAGAGCTACCTACACTGGGCTTCAAAGGCCTTaGCACAGAGCTCTAAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PPCTGYKLDSSTERATYTGLQRP*HRALKQ Trigger: TTGCTTTAGAGCTCTGTGCAAAGGCCTTTGAAGCCC...AGTGTAGGTAGCTCTCTCTGTGGAGCTGTCCAGCTTATAGCCTGTGCAGGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS TCA 90 bp | CCCGCATCTCCTAGTAACTGGTCAGGGAACTGCAAAGTCACCCGCTaGCAACCTAAATCGCAGACAAATTTCGTAACTCGCTCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PASPSNWSGNCKVTR*QPKSQTNFVTRSSS Trigger: TGAGCTGGAGCGAGTTACGAAATTTGTCTGCGATTTAGGTTGTCAGCGGGTGACTTTGCAGTTCCCTGACCAGTTACTAGGAGATGCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CAA 90 bp | AAAAGTCATGTGTCCAGTGAATATTGTCTTGGACAGTGCAGGTTTAGACCAGAGGAAGTGCACAAGGGCTaGAGCTCCAGCCTGCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KSHVSSEYCLGQCRFRPEEVHKG*SSSLLG Trigger: GCCGAGCAGGCTGGAGCTCAAGCCCTTGTGCACTTC...CTCTGGTCTAAACCTGCACTGTCCAAGACAATATTCACTGGACACATGACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| CDS-3UTR CAA 90 bp | AAGAATTACTCTGCCCAAACTGTCAACAGTGCTGAGGGAGGTGGAAGAACTCTGCTTGGCACCCTGGTCTaGTGTCTGTCCTGTATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KNYSAQTVNSAEGGGRTLLGTLV*CLSCIW Trigger: CCAGATACAGGACAGACACAAGACCAGGGTGCCAAG...CAGAGTTCTTCCACCTCCCTCAGCACTGTTGACAGTTTGGGCAGAGTAATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS-3UTR CAA 90 bp | TTAAATATAACTCACATATCCACCCACAGGATCTGTGTAGAACAGAGCTTTAGTCTTAGTCTCCCAGCCTaGGCACCCTGGTCTTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LNITHISTHRICVEQSFSLSLPA*APWSCV Trigger: GACACAAGACCAGGGTGCCAAGGCTGGGAGACTAAG...ACTAAAGCTCTGTTCTACACAGATCCTGTGGGTGGATATGTGAGTTATATTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||
| CDS GCA 72 bp | GGAGGAGTGAACTGTCCTGGAACGCCCGCCTCCCGTTaGAGGGCTGCCTCCGCAGGGCTGCTGAACGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GGVNCPGTPASR*RAASAGLLNVD Trigger: GTCTACGTTCAGCAGCCCTGCGGAGGCAGCCCTGCAACGGGAGGCGGGCGTTCCAGGACAGTTCACTCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| CDS CAA 72 bp | AGGAGGAGTGAACTGTCCTGGAACGCCCGCCTCCCGTaGCAGGGCTGCCTCCGCAGGGCTGCTGAACGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: RRSELSWNARLP*QGCLRRAAERR Trigger: TCTACGTTCAGCAGCCCTGCGGAGGCAGCCCTGCAACGGGAGGCGGGCGTTCCAGGACAGTTCACTCCTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| CDS TCA 72 bp | CCAGCTCATACACGCGGTCCAGGTCTTCAGGAGGAGTaGACTGTCCTGGAACGCCCGCCTCCCGTTGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PAHTRGPGLQEE*TVLERPPPVAG Trigger: CCCTGCAACGGGAGGCGGGCGTTCCAGGACAGTTCACTCCTCCTGAAGACCTGGACCGCGTGTATGAGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030265.4 ENSMUST00000183773.2 |
||
| CDS TCA 72 bp | CCTAGTAACTGGTCAGGGAACTGCAAAGTCACCCGCTaGCAACCTAAATCGCAGACAAATTTCGTAACTCGC | + |
|
Preference number: 6 (lower is better) Translates to: PSNWSGNCKVTR*QPKSQTNFVTR Trigger: GCGAGTTACGAAATTTGTCTGCGATTTAGGTTGTCAGCGGGTGACTTTGCAGTTCCCTGACCAGTTACTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030265.4 |
||