Pregenerated sensors for DPH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078789Ensembl transcript IDs: ENSMUST00000044949.11, ENSMUST00000139958.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGGCCCAGGGCACACACATAAGCTGCTAGTGCAGCCCCCTGGCTaGAGCCAAGAAGTCCATCAAACGGCCCCAGCGTGTCAAGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: PGPGHTHKLLVQPPG*SQEVHQTAPACQGP Trigger: GGGCCCTTGACACGCTGGGGCCGTTTGATGGACTTCTTGGCTTCAGCCAGGGGGCTGCACTAGCAGCTTATGTGTGTGCCCTGGGCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR CCA 90 bp | CTGGTCCAAGAACTTAAGGTAGGCCTGACGCTGAGATGCAGCTGCTaGAATGAAGTGACCACCGGAGTGGGTGAGGGTGACGGCTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: LVQELKVGLTLRCSC*NEVTTGVGEGDGSK Trigger: CTTGGAGCCGTCACCCTCACCCACTCCGGTGGTCACTTCATTCCAGCAGCTGCATCTCAGCGTCAGGCCTACCTTAAGTTCTTGGACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR GCA 90 bp | AAACTGGTCCAAGAACTTAAGGTAGGCCTGACGCTGAGATGCAGCTaGTGGAATGAAGTGACCACCGGAGTGGGTGAGGGTGACGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: KLVQELKVGLTLRCS*WNEVTTGVGEGDGS Trigger: GGAGCCGTCACCCTCACCCACTCCGGTGGTCACTTCATTCCAGCAGCTGCATCTCAGCGTCAGGCCTACCTTAAGTTCTTGGACCAGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR GCA 90 bp | TTCTGCAAACTGGTCCAAGAACTTAAGGTAGGCCTGACGCTGAGATaGAGCTGCTGGAATGAAGTGACCACCGGAGTGGGTGAGGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: FCKLVQELKVGLTLR*SCWNEVTTGVGEGD Trigger: GTCACCCTCACCCACTCCGGTGGTCACTTCATTCCAGCAGCTGCATCTCAGCGTCAGGCCTACCTTAAGTTCTTGGACCAGTTTGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR GCA 90 bp | GGACAAAGTGGGAGCAGTGCGGAGACATTTGTCCATCCTTCATTCTaGAAACTGGTCCAAGAACTTAAGGTAGGCCTGACGCTGAGATGC | + |
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Preference number: 1 (lower is better) Translates to: GQSGSSAETFVHPSF*KLVQELKVGLTLRC Trigger: GCATCTCAGCGTCAGGCCTACCTTAAGTTCTTGGACCAGTTTGCAGAATGAAGGATGGACAAATGTCTCCGCACTGCTCCCACTTTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR CCA 90 bp | TTAACTAGCCATGGTGAGGAGACAGGGGAGAGCTGCTGGACAAAGTaGGAGCAGTGCGGAGACATTTGTCCATCCTTCATTCTGCAAACT | + |
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Preference number: 1 (lower is better) Translates to: LTSHGEETGESCWTK*EQCGDICPSFILQT Trigger: AGTTTGCAGAATGAAGGATGGACAAATGTCTCCGCACTGCTCCCACTTTGTCCAGCAGCTCTCCCCTGTCTCCTCACCATGGCTAGTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR CCA 90 bp | ACAGTTGTCTTAACTAGCCATGGTGAGGAGACAGGGGAGAGCTGCTaGACAAAGTGGGAGCAGTGCGGAGACATTTGTCCATCCTTCATT | + |
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Preference number: 1 (lower is better) Translates to: TVVLTSHGEETGESC*TKWEQCGDICPSFI Trigger: AATGAAGGATGGACAAATGTCTCCGCACTGCTCCCACTTTGTCCAGCAGCTCTCCCCTGTCTCCTCACCATGGCTAGTTAAGACAACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTGAGGGTGACGGCTCCAAGGAATCGGCTAGCCAATTGCATACTCTCCTGGAAGCGAGGATCGCCTaGCTGGCCCAGGGCACACAC | + |
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Preference number: 2 (lower is better) Translates to: VGEGDGSKESASQLHTLLEARIA*LAQGTH Trigger: GTGTGTGCCCTGGGCCAGGCAGGCGATCCTCGCTTC...CAGGAGAGTATGCAATTGGCTAGCCGATTCCTTGGAGCCGTCACCCTCACCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR-3UTR TCA 90 bp | TTTGGTTTGGTGCTGCCCCAGGATCGGGGCAGCAGGAGAAAGGCATTCAACATCGCTGCTGGAATGAAGTaGCCACCGGAGTGGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: FGLVLPQDRGSRRKAFNIAAGMK*PPEWVR Trigger: CCTCACCCACTCCGGTGGTCACTTCATTCCAGCAGC...GATGTTGAATGCCTTTCTCCTGCTGCCCCGATCCTGGGGCAGCACCAAACCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR-3UTR TCA 90 bp | GCCCCAGGATCGGGGCAGCAGGAGAAAGGCATTCAACATCTAAAGCATCGCTTTATGCAGCTGCTGGAATaGAGTGACCACCGGAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: APGSGQQEKGIQHLKHRFMQLLE*SDHRSG Trigger: CCCACTCCGGTGGTCACTTCATTCCAGCAGCTGCAT...AAAGCGATGCTTTAGATGTTGAATGCCTTTCTCCTGCTGCCCCGATCCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR-3UTR GCA 90 bp | TTCTGCAAACTGGTCCAAGAACTTAAGGTAGGCCTGACGCTGAGATGCAGCTGCGTTTCCAGGGCCTCCTaGAGACCCCTGCACACTGTG | + |
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Preference number: 2 (lower is better) Translates to: FCKLVQELKVGLTLRCSCVSRAS*RPLHTV Trigger: CACAGTGTGCAGGGGTCTGCAGGAGGCCCTGGAAAC...GCAGCTGCATCTCAGCGTCAGGCCTACCTTAAGTTCTTGGACCAGTTTGCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR CAA 90 bp | ACCGGAGTGGGTGAGGGTGACGGCTCCAAGGAATCGGCTAGCCAATaGCATACTCTCCTGAGAAGGGATGACTCGATCAGTATCCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: TGVGEGDGSKESASQ*HTLLRRDDSISIPK Trigger: TTTGGGGATACTGATCGAGTCATCCCTTCTCAGGAGAGTATGCAATTGGCTAGCCGATTCCTTGGAGCCGTCACCCTCACCCACTCCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR-3UTR GCA 90 bp | AGCAGTGCGGAGACATTTGTCCATCCTTCATTCTGCAAACTGGTCCAAGAACTTCACCAGCCTCGAGGCTaGTCCTCCGGAGAACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SSAETFVHPSFCKLVQELHQPRG*SSGEQG Trigger: GCCCTGTTCTCCGGAGGAGCAGCCTCGAGGCTGGTG...AAGTTCTTGGACCAGTTTGCAGAATGAAGGATGGACAAATGTCTCCGCACTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR-3UTR GCA 90 bp | AGGATCGGGGCAGCAGGAGAAAGGCATTCAACATCTAAAGCATCGCTTTATTGTTGTCAGTCACAGGGGTaGCAGCCCCTGCCTGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: RIGAAGERHSTSKASLYCCQSQG*QPLPAH Trigger: GTGGGCAGGCAGGGGCTGGCACCCCTGTGACTGACA...ACAATAAAGCGATGCTTTAGATGTTGAATGCCTTTCTCCTGCTGCCCCGATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR-3UTR GCA 90 bp | GAGACATTTGTCCATCCTTCATTCTGCAAACTGGTCCAAGAACTTAAGGTAGGCCCTCCTGCAGACCCCTaGACACTGTGGACTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: ETFVHPSFCKLVQELKVGPPADP*TLWTLP Trigger: TGGAAGAGTCCACAGTGTGCAGGGGTCTGCAGGAGG...GCCTACCTTAAGTTCTTGGACCAGTTTGCAGAATGAAGGATGGACAAATGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR-3UTR GCA 90 bp | AGGATCGGGGCAGCAGGAGAAAGGCATTCAACATCTAAAGCATCGCTTTATTGTACGCTGAGATGCAGCTaGTGGAATGAAGTGACCACC | + |
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Preference number: 2 (lower is better) Translates to: RIGAAGERHSTSKASLYCTLRCS*WNEVTT Trigger: GGTGGTCACTTCATTCCAGCAGCTGCATCTCAGCGT...ACAATAAAGCGATGCTTTAGATGTTGAATGCCTTTCTCCTGCTGCCCCGATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR-3UTR CCA 90 bp | CAATTGCATACTCTCCTGAGAAGGGATGACTCGATCAGTATCCCCAAAAACATGGACCCCTGCACACTGTaGACTCTTCCAGAGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: QLHTLLRRDDSISIPKNMDPCTL*TLPEQR Trigger: TCTCTGCTCTGGAAGAGTCCACAGTGTGCAGGGGTC...CATGTTTTTGGGGATACTGATCGAGTCATCCCTTCTCAGGAGAGTATGCAATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR-3UTR TCA 90 bp | AGGATCGGGGCAGCAGGAGAAAGGCATTCAACATCTAAAGCATCGCTTTATTGTAATTGCATACTCTCCTaGGAAGGGATGACTCGATCA | + |
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Preference number: 2 (lower is better) Translates to: RIGAAGERHSTSKASLYCNCILS*EGMTRS Trigger: TGATCGAGTCATCCCTTCTCAGGAGAGTATGCAATT...ACAATAAAGCGATGCTTTAGATGTTGAATGCCTTTCTCCTGCTGCCCCGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR GCA 72 bp | TCGGCTTCCTCCTCAGAAAACCACCAGCCTCGAGGCTaGTCCTCCGGAGAACAGGGCCCTGCTGCTCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: SASSSENHQPRG*SSGEQGPAALA Trigger: GGCCAGAGCAGCAGGGCCCTGTTCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTTCTGAGGAGGAAGCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR GCA 72 bp | AAGTCCATCAAACGGCCCCAGCGTGTCAAGGGCCCGTaGCACCGTTTCCAGGGCCTCCTGCAGACCCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: KSIKRPQRVKGP*HRFQGLLQTPA Trigger: TGCAGGGGTCTGCAGGAGGCCCTGGAAACGGTGGCACGGGCCCTTGACACGCTGGGGCCGTTTGATGGACTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR CCA 72 bp | GAACTTAAGGTAGGCCTGACGCTGAGATGCAGCTGCTaGAATGAAGTGACCACCGGAGTGGGTGAGGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: ELKVGLTLRCSC*NEVTTGVGEGD Trigger: GTCACCCTCACCCACTCCGGTGGTCACTTCATTCCAGCAGCTGCATCTCAGCGTCAGGCCTACCTTAAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR GCA 72 bp | CAAGAACTTAAGGTAGGCCTGACGCTGAGATGCAGCTaGTGGAATGAAGTGACCACCGGAGTGGGTGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: QELKVGLTLRCS*WNEVTTGVGEG Trigger: ACCCTCACCCACTCCGGTGGTCACTTCATTCCAGCAGCTGCATCTCAGCGTCAGGCCTACCTTAAGTTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR GCA 72 bp | CTGGTCCAAGAACTTAAGGTAGGCCTGACGCTGAGATaGAGCTGCTGGAATGAAGTGACCACCGGAGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: LVQELKVGLTLR*SCWNEVTTGVG Trigger: ACCCACTCCGGTGGTCACTTCATTCCAGCAGCTGCATCTCAGCGTCAGGCCTACCTTAAGTTCTTGGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR GCA 72 bp | GGGAGCAGTGCGGAGACATTTGTCCATCCTTCATTCTaGAAACTGGTCCAAGAACTTAAGGTAGGCCTGACG | + |
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Preference number: 3 (lower is better) Translates to: GSSAETFVHPSF*KLVQELKVGLT Trigger: CGTCAGGCCTACCTTAAGTTCTTGGACCAGTTTGCAGAATGAAGGATGGACAAATGTCTCCGCACTGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR TCA 72 bp | GCTCCAAGGAATCGGCTAGCCAATTGCATACTCTCCTaGGAAGGGATGACTCGATCAGTATCCCCAAAAACA | + |
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Preference number: 3 (lower is better) Translates to: APRNRLANCILS*EGMTRSVSPKT Trigger: TGTTTTTGGGGATACTGATCGAGTCATCCCTTCTCAGGAGAGTATGCAATTGGCTAGCCGATTCCTTGGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | AGCGTGTCAAGGGCCCGTGCCACCGTTTCCAGGGCCTCCTGCAGACCCCTGCACCTCACAGGCTGGGGCTaGAGAGCCGCCTCTGGACCC | + |
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Preference number: 4 (lower is better) Translates to: SVSRARATVSRASCRPLHLTGWG*RAASGP Trigger: GGGTCCAGAGGCGGCTCTCCAGCCCCAGCCTGTGAG...GTGCAGGGGTCTGCAGGAGGCCCTGGAAACGGTGGCACGGGCCCTTGACACGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | CAGCGTGTCAAGGGCCCGTGCCACCGTTTCCAGGGCCTCCTGCAGACCCCTGCAAGCGTGCAGCAGCAATaGCTTCCTGGCGAGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QRVKGPCHRFQGLLQTPASVQQQ*LPGEWP Trigger: AGGCCACTCGCCAGGAAGCCATTGCTGCTGCACGCT...TGCAGGGGTCTGCAGGAGGCCCTGGAAACGGTGGCACGGGCCCTTGACACGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR GCA 90 bp | CAGCGTGTCAAGGGCCCGTGCCACCGTTTCCAGGGCCTCCTGCAGACCCCTGCACGTGGACATGCCACCTaGACCCACACATCCACCTCA | + |
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Preference number: 4 (lower is better) Translates to: QRVKGPCHRFQGLLQTPARGHAT*THTSTS Trigger: TGAGGTGGATGTGTGGGTGCAGGTGGCATGTCCACG...TGCAGGGGTCTGCAGGAGGCCCTGGAAACGGTGGCACGGGCCCTTGACACGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | GAGGATCGCCTGCCTGGCCCAGGGCACACACATAAGCTGCTAGTGCAGCCCCCTGCAACTCTCACAGGCTaGGGCTGGAGAGCCGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: EDRLPGPGHTHKLLVQPPATLTG*GWRAAS Trigger: AGAGGCGGCTCTCCAGCCCCAGCCTGTGAGAGTTGC...AGGGGGCTGCACTAGCAGCTTATGTGTGTGCCCTGGGCCAGGCAGGCGATCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | AGCGTGTCAAGGGCCCGTGCCACCGTTTCCAGGGCCTCCTGCAGACCCCTGCACCTGAACCCCAGTCAATaGAGAGGCGTGGACATGCCA | + |
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Preference number: 4 (lower is better) Translates to: SVSRARATVSRASCRPLHLNPSQ*RGVDMP Trigger: TGGCATGTCCACGCCTCTCCATTGACTGGGGTTCAG...GTGCAGGGGTCTGCAGGAGGCCCTGGAAACGGTGGCACGGGCCCTTGACACGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR TCA 90 bp | TGGCAAGGGGAAGCGAGGATCGCCTGCCTGGCCCAGGGCACACACATAAGCTGCCCAAGGCCCTTGCAGTaGAGTCATCCACACAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: WQGEARIACLAQGTHISCPRPLQ*SHPHSK Trigger: CTTGCTGTGTGGATGACTTCACTGCAAGGGCCTTGG...GCAGCTTATGTGTGTGCCCTGGGCCAGGCAGGCGATCCTCGCTTCCCCTTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR TCA 90 bp | GAGGATCGCCTGCCTGGCCCAGGGCACACACATAAGCTGCTAGTGCAGCCCCCTTGGCTTGGGAAAGGCTaGACCCCAGTCAATGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: EDRLPGPGHTHKLLVQPPWLGKG*TPVNGE Trigger: CTCTCCATTGACTGGGGTTCAGCCTTTCCCAAGCCA...AGGGGGCTGCACTAGCAGCTTATGTGTGTGCCCTGGGCCAGGCAGGCGATCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | TCGGCTTCCTCCTCAGAAAACCACCAGCCTCGAGGCTGCTCCTCCGGAGAACAGGCCACCTTCTTGGCCTaGGCCTGCTGGATTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SASSSENHQPRGCSSGEQATFLA*ACWILQ Trigger: CTGGAGAATCCAGCAGGCCCAGGCCAAGAAGGTGGC...CTGTTCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTTCTGAGGAGGAAGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | GAGGATCGCCTGCCTGGCCCAGGGCACACACATAAGCTGCTAGTGCAGCCCCCTTTGGCCTGGGCCTGCTaGATTCTCCAGATGGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: EDRLPGPGHTHKLLVQPPLAWAC*ILQMVL Trigger: CAAAACCATCTGGAGAATCCAGCAGGCCCAGGCCAA...AGGGGGCTGCACTAGCAGCTTATGTGTGTGCCCTGGGCCAGGCAGGCGATCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | CCTCCTGCAGACCCCTGCACACTGTGGACTCTTCCAGAGCAGAGAAAACATCGGAGTGCTCCAGGATCTTaGGACTGCCCTGGCGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PPADPCTLWTLPEQRKHRSAPGS*DCPGGP Trigger: TGGGCCGCCAGGGCAGTCCCAAGATCCTGGAGCACT...CCGATGTTTTCTCTGCTCTGGAAGAGTCCACAGTGTGCAGGGGTCTGCAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | CTCCTCAGAAAACCACCAGCCTCGAGGCTGCTCCTCCGGAGAACAGGGCCCTGCCAGAGTAGAAGTCCATaGGGTAGGGTTGCTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LLRKPPASRLLLRRTGPCQSRSP*GRVAAK Trigger: CTTGGCAGCAACCCTACCCCATGGACTTCTACTCTG...GCAGGGCCCTGTTCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTTCTGAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR TCA 90 bp | CGGCTTCCTCCTCAGAAAACCACCAGCCTCGAGGCTGCTCCTCCGGAGAACAGGAGCAAGCCCCATAGGTaGCATCACCCATCACCATCA | + |
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Preference number: 4 (lower is better) Translates to: RLPPQKTTSLEAAPPENRSKPHR*HHPSPS Trigger: TGATGGTGATGGGTGATGTCACCTATGGGGCTTGCT...CCTGTTCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTTCTGAGGAGGAAGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR TCA 90 bp | CCTCCTCAGAAAACCACCAGCCTCGAGGCTGCTCCTCCGGAGAACAGGGCCCTGATGACAGACTCCAGATaGAAGCGGCCATCTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: PPQKTTSLEAAPPENRALMTDSR*KRPSPR Trigger: TCTTGGAGATGGCCGCTTTCATCTGGAGTCTGTCAT...CAGGGCCCTGTTCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTTCTGAGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | ATAATAAATCTTGGCAAGGGGAAGCGAGGATCGCCTGCCTGGCCCAGGGCACACTGGCTTCCTGGCGAGTaGCCTGCATGCGCTGATGGT | + |
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Preference number: 4 (lower is better) Translates to: IINLGKGKRGSPAWPRAHWLPGE*PACADG Trigger: ACCATCAGCGCATGCAGGCCACTCGCCAGGAAGCCA...GTGTGCCCTGGGCCAGGCAGGCGATCCTCGCTTCCCCTTGCCAAGATTTATTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | CCTCCTGCAGACCCCTGCACACTGTGGACTCTTCCAGAGCAGAGAAAACATCGGGTAAGGCCACCTTCTTaGCCTGGGCCTGCTGGATTC | + |
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Preference number: 4 (lower is better) Translates to: PPADPCTLWTLPEQRKHRVRPPS*PGPAGF Trigger: GAATCCAGCAGGCCCAGGCCAAGAAGGTGGCCTTAC...CCGATGTTTTCTCTGCTCTGGAAGAGTCCACAGTGTGCAGGGGTCTGCAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR TCA 90 bp | GCTGCTAGTGCAGCCCCCTGGCTGAAGCCAAGAAGTCCATCAAACGGCCCCAGCTCACCTCAGCCTCTGTaGACCTTTCCAAGATATCCA | + |
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Preference number: 4 (lower is better) Translates to: AASAAPWLKPRSPSNGPSSPQPL*TFPRYP Trigger: TGGATATCTTGGAAAGGTTCACAGAGGCTGAGGTGA...GCTGGGGCCGTTTGATGGACTTCTTGGCTTCAGCCAGGGGGCTGCACTAGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | GTAGGCCTGACGCTGAGATGCAGCTGCTGGAATGAAGTGACCACCGGAGTGGGTACCGAGTCCAGAAGGTaGGCAGTGTCTATCCGGATA | + |
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Preference number: 4 (lower is better) Translates to: VGLTLRCSCWNEVTTGVGTESRR*AVSIRI Trigger: TATCCGGATAGACACTGCCCACCTTCTGGACTCGGT...ACCCACTCCGGTGGTCACTTCATTCCAGCAGCTGCATCTCAGCGTCAGGCCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR TCA 90 bp | AAAGTGGGAGCAGTGCGGAGACATTTGTCCATCCTTCATTCTGCAAACTGGTCCGCCCCAGGATTTGGCTaGGCGTGCAGCAGCAATGGC | + |
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Preference number: 4 (lower is better) Translates to: KVGAVRRHLSILHSANWSAPGFG*ACSSNG Trigger: GCCATTGCTGCTGCACGCTCAGCCAAATCCTGGGGC...GGACCAGTTTGCAGAATGAAGGATGGACAAATGTCTCCGCACTGCTCCCACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR TCA 90 bp | ATAATAAATCTTGGCAAGGGGAAGCGAGGATCGCCTGCCTGGCCCAGGGCACACCCCAAGTTTCTGAGCTaGGATTCCAAGTGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: IINLGKGKRGSPAWPRAHPKFLS*DSKCSR Trigger: CCTGGAGCACTTGGAATCTCAGCTCAGAAACTTGGG...GTGTGCCCTGGGCCAGGCAGGCGATCCTCGCTTCCCCTTGCCAAGATTTATTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR TCA 90 bp | CCTCCTGCAGACCCCTGCACACTGTGGACTCTTCCAGAGCAGAGAAAACATCGGCCTCAGGAAGTAGACTaGGCTTGCTGGGGAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: PPADPCTLWTLPEQRKHRPQEVD*ACWGRS Trigger: AGATCTTCCCCAGCAAGCTCAGTCTACTTCCTGAGG...CCGATGTTTTCTCTGCTCTGGAAGAGTCCACAGTGTGCAGGGGTCTGCAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR GCA 90 bp | TCGGCTTCCTCCTCAGAAAACCACCAGCCTCGAGGCTGCTCCTCCGGAGAACAGCTCTGGATAGGACTTTaGCATATGGGTCATACCGGT | + |
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Preference number: 4 (lower is better) Translates to: SASSSENHQPRGCSSGEQLWIGL*HMGHTG Trigger: ACCGGTATGACCCATATGGCAAAGTCCTATCCAGAG...CTGTTCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTTCTGAGGAGGAAGCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR GCA 90 bp | GCCCCAGGATCGGGGCAGCAGGAGAAAGGCATTCAACATCTAAAGCATCGCTTTTCTGGTCTGCGCAGTTaGAACTCTCACAGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: APGSGQQEKGIQHLKHRFSGLRS*NSHRLG Trigger: CCCCAGCCTGTGAGAGTTGCAACTGCGCAGACCAGA...AAAGCGATGCTTTAGATGTTGAATGCCTTTCTCCTGCTGCCCCGATCCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | GTTTGGTTTGGTGCTGCCCCAGGATCGGGGCAGCAGGAGAAAGGCATTCAACATGAACGGAGGTGTCCATaGGGACTAGACAGCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VWFGAAPGSGQQEKGIQHERRCP*GLDSCD Trigger: GTCACAGCTGTCTAGTCCCCATGGACACCTCCGTTC...ATGTTGAATGCCTTTCTCCTGCTGCCCCGATCCTGGGGCAGCACCAAACCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR TCA 90 bp | ATAATAAATCTTGGCAAGGGGAAGCGAGGATCGCCTGCCTGGCCCAGGGCACACAAGGTTGACACAAACTaGATGGTGCTGACCAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IINLGKGKRGSPAWPRAHKVDTN*MVLTRA Trigger: CGCTCTGGTCAGCACCATTCAGTTTGTGTCAACCTT...GTGTGCCCTGGGCCAGGCAGGCGATCCTCGCTTCCCCTTGCCAAGATTTATTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR TCA 90 bp | CCACCGGAGTGGGTGAGGGTGACGGCTCCAAGGAATCGGCTAGCCAATTGCATAGAAGTCCCAAGTTTCTaGGCTGAGATTCCAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPEWVRVTAPRNRLANCIEVPSF*AEIPSA Trigger: AGCACTTGGAATCTCAGCTCAGAAACTTGGGACTTC...TATGCAATTGGCTAGCCGATTCCTTGGAGCCGTCACCCTCACCCACTCCGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | TTCCAGAGCAGAGAAAACATCGGCTTCCTCCTCAGAAAACCACCAGCCTCGAGGGTGTCAGCAGTGGCTTaGGAAAGGCTGAACCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FQSRENIGFLLRKPPASRVSAVA*ERLNPS Trigger: ACTGGGGTTCAGCCTTTCCCAAGCCACTGCTGACAC...CCTCGAGGCTGGTGGTTTTCTGAGGAGGAAGCCGATGTTTTCTCTGCTCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR CAA 72 bp | GGTGAGGGTGACGGCTCCAAGGAATCGGCTAGCCAATaGCATACTCTCCTGAGAAGGGATGACTCGATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GEGDGSKESASQ*HTLLRRDDSIS Trigger: ACTGATCGAGTCATCCCTTCTCAGGAGAGTATGCAATTGGCTAGCCGATTCCTTGGAGCCGTCACCCTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR GCA 90 bp | AGGATCGGGGCAGCAGGAGAAAGGCATTCAACATCTAAAGCATCGCTTTATTGTCCAGGATCTTGGGACTaGCCTGGCGGCCCAAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RIGAAGERHSTSKASLYCPGSWD*PGGPRF Trigger: GAACCTTGGGCCGCCAGGGCAGTCCCAAGATCCTGG...ACAATAAAGCGATGCTTTAGATGTTGAATGCCTTTCTCCTGCTGCCCCGATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | TTGGTTTGGTGCTGCCCCAGGATCGGGGCAGCAGGAGAAAGGCATTCAACATCTCAGGGGCTTGCACTGTaGGACACTGATGTGATAATC | + |
|
Preference number: 4 (lower is better) Translates to: LVWCCPRIGAAGERHSTSQGLAL*DTDVII Trigger: GATTATCACATCAGTGTCCCACAGTGCAAGCCCCTG...AGATGTTGAATGCCTTTCTCCTGCTGCCCCGATCCTGGGGCAGCACCAAACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR TCA 90 bp | GTCCATCCTTCATTCTGCAAACTGGTCCAAGAACTTAAGGTAGGCCTGACGCTGAAGACTCGGAAGTCTTaGACGGAGGTGTCCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHPSFCKLVQELKVGLTLKTRKS*TEVSMG Trigger: CCCCATGGACACCTCCGTTCAAGACTTCCGAGTCTT...CAGCGTCAGGCCTACCTTAAGTTCTTGGACCAGTTTGCAGAATGAAGGATGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR GCA 90 bp | AGGATCGGGGCAGCAGGAGAAAGGCATTCAACATCTAAAGCATCGCTTTATTGTCTGCACCTTGTCAGATaGAGGCTGGCAGAGACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RIGAAGERHSTSKASLYCLHLVR*RLAETP Trigger: CGGGGTCTCTGCCAGCCTGCATCTGACAAGGTGCAG...ACAATAAAGCGATGCTTTAGATGTTGAATGCCTTTCTCCTGCTGCCCCGATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | ATAATAAATCTTGGCAAGGGGAAGCGAGGATCGCCTGCCTGGCCCAGGGCACACGCTGGATTCTCCAGATaGTTTTGGGGATCTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IINLGKGKRGSPAWPRAHAGFSR*FWGSQS Trigger: ACTTTGAGATCCCCAAAACCATCTGGAGAATCCAGC...GTGTGCCCTGGGCCAGGCAGGCGATCCTCGCTTCCCCTTGCCAAGATTTATTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR GCA 90 bp | AGCAGTGCGGAGACATTTGTCCATCCTTCATTCTGCAAACTGGTCCAAGAACTTATAGCCGAGGGGATGTaGAGCCTAGGATCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSAETFVHPSFCKLVQELIAEGM*SLGSPQ Trigger: CTGGGGAGATCCTAGGCTGCACATCCCCTCGGCTAT...AAGTTCTTGGACCAGTTTGCAGAATGAAGGATGGACAAATGTCTCCGCACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR GCA 90 bp | AAAGTGGGAGCAGTGCGGAGACATTTGTCCATCCTTCATTCTGCAAACTGGTCCATGGCCCTAAGGAGCTaGCAGAGTAGAAGTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KVGAVRRHLSILHSANWSMALRS*QSRSPW Trigger: CCATGGACTTCTACTCTGGCAGCTCCTTAGGGCCAT...GGACCAGTTTGCAGAATGAAGGATGGACAAATGTCTCCGCACTGCTCCCACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| 3UTR CAA 72 bp | GAGCTGCTGGACAAAGTGGGAGCAGTGCGGAGACATTaGTCCATCCTTCATTCTGCAAACTGGTCCAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ELLDKVGAVRRH*SILHSANWSKN Trigger: GTTCTTGGACCAGTTTGCAGAATGAAGGATGGACAAATGTCTCCGCACTGCTCCCACTTTGTCCAGCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | TTCTGCAAACTGGTCCAAGAACTTAAGGTAGGCCTGACGCTGAGATGCAGCTGCTTAGAAGGCAGAACTTaGACAGCAGCCTGTAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FCKLVQELKVGLTLRCSCLEGRT*TAACNW Trigger: CCAGTTACAGGCTGCTGTCCAAGTTCTGCCTTCTAA...GCAGCTGCATCTCAGCGTCAGGCCTACCTTAAGTTCTTGGACCAGTTTGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
||
| CDS-3UTR CCA 90 bp | CAATTGCATACTCTCCTGAGAAGGGATGACTCGATCAGTATCCCCAAAAACATGGTCAATGGAGAGGCGTaGACATGCCACCTGCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLHTLLRRDDSISIPKNMVNGEA*TCHLHP Trigger: TGGGTGCAGGTGGCATGTCCACGCCTCTCCATTGAC...CATGTTTTTGGGGATACTGATCGAGTCATCCCTTCTCAGGAGAGTATGCAATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR GCA 90 bp | AGCAGTGCGGAGACATTTGTCCATCCTTCATTCTGCAAACTGGTCCAAGAACTTTTCTTGGCCTGGGCCTaGTGGATTCTCCAGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSAETFVHPSFCKLVQELFLAWA*WILQMV Trigger: AACCATCTGGAGAATCCAGCAGGCCCAGGCCAAGAA...AAGTTCTTGGACCAGTTTGCAGAATGAAGGATGGACAAATGTCTCCGCACTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR TCA 90 bp | GTCCATCCTTCATTCTGCAAACTGGTCCAAGAACTTAAGGTAGGCCTGACGCTGTGCACTGTGGGACACTaGTGTGATAATCAGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHPSFCKLVQELKVGLTLCTVGH*CDNQLS Trigger: TGAAAGCTGATTATCACATCAGTGTCCCACAGTGCA...CAGCGTCAGGCCTACCTTAAGTTCTTGGACCAGTTTGCAGAATGAAGGATGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CCA 90 bp | GCCCCAGGATCGGGGCAGCAGGAGAAAGGCATTCAACATCTAAAGCATCGCTTTTTCTCCAGATGGTTTTaGGGATCTCAAAGTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: APGSGQQEKGIQHLKHRFFSRWF*GSQSCS Trigger: ACTACAACTTTGAGATCCCCAAAACCATCTGGAGAA...AAAGCGATGCTTTAGATGTTGAATGCCTTTCTCCTGCTGCCCCGATCCTGGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR GCA 90 bp | GAGACATTTGTCCATCCTTCATTCTGCAAACTGGTCCAAGAACTTAAGGTAGGCAACTCCCAAGGCCCTTaGAGTGAAGTCATCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: ETFVHPSFCKLVQELKVGNSQGP*SEVIHT Trigger: TGTGTGGATGACTTCACTGCAAGGGCCTTGGGAGTT...GCCTACCTTAAGTTCTTGGACCAGTTTGCAGAATGAAGGATGGACAAATGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS GCA 90 bp | TGGGGCTGGAGAGCCGCCTCTGGACCCTTGCTGCACCTTGTCAGATaGAGGCTGGCAGAGACCCCGAGGTGCTCGGTCCCGACCGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: WGWRAASGPLLHLVR*RLAETPRCSVPTVV Trigger: AACTACGGTCGGGACCGAGCACCTCGGGGTCTCTGCCAGCCTGCATCTGACAAGGTGCAGCAAGGGTCCAGAGGCGGCTCTCCAGCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
||
| CDS GCA 90 bp | CAACTCTCACAGGCTGGGGCTGGAGAGCCGCCTCTGGACCCTTGCTaGACCTTGTCAGATGCAGGCTGGCAGAGACCCCGAGGTGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QLSQAGAGEPPLDPC*TLSDAGWQRPRGAR Trigger: CCGAGCACCTCGGGGTCTCTGCCAGCCTGCATCTGACAAGGTGCAGCAAGGGTCCAGAGGCGGCTCTCCAGCCCCAGCCTGTGAGAGTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CAA 90 bp | CCTCCTCAGAAAACCACCAGCCTCGAGGCTGCTCCTCCGGAGAACAGGGCCCTGAAGTGCTCCAGGATCTaGGGACTGCCCTGGCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PPQKTTSLEAAPPENRALKCSRI*GLPWRP Trigger: GGGCCGCCAGGGCAGTCCCAAGATCCTGGAGCACTT...CAGGGCCCTGTTCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTTCTGAGGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CAA 90 bp | AGCGTGTCAAGGGCCCGTGCCACCGTTTCCAGGGCCTCCTGCAGACCCCTGCACTGTAAGGCCACCTTCTaGGCCTGGGCCTGCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: SVSRARATVSRASCRPLHCKATF*AWACWI Trigger: AATCCAGCAGGCCCAGGCCAAGAAGGTGGCCTTACA...GTGCAGGGGTCTGCAGGAGGCCCTGGAAACGGTGGCACGGGCCCTTGACACGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS GCA 90 bp | TTGCAACTCTCACAGGCTGGGGCTGGAGAGCCGCCTCTGGACCCTTaGTGCACCTTGTCAGATGCAGGCTGGCAGAGACCCCGAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LQLSQAGAGEPPLDP*CTLSDAGWQRPRGA Trigger: AGCACCTCGGGGTCTCTGCCAGCCTGCATCTGACAAGGTGCAGCAAGGGTCCAGAGGCGGCTCTCCAGCCCCAGCCTGTGAGAGTTGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CAA 90 bp | CTCCTCAGAAAACCACCAGCCTCGAGGCTGCTCCTCCGGAGAACAGGGCCCTGCGGTGTCAGCAGTGGCTaGGGAAAGGCTGAACCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLRKPPASRLLLRRTGPCGVSSG*GKAEPQ Trigger: CTGGGGTTCAGCCTTTCCCAAGCCACTGCTGACACC...GCAGGGCCCTGTTCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTTCTGAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS TCA 90 bp | GGCCACAGCTGCCTCGTACGGTGTCAGCAGTGGCTTGGGAAAGGCTaGACCCCAGTCAATGGAGAGGCGTGGACATGCCACCTGCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: GHSCLVRCQQWLGKG*TPVNGEAWTCHLHP Trigger: TGGGTGCAGGTGGCATGTCCACGCCTCTCCATTGACTGGGGTTCAGCCTTTCCCAAGCCACTGCTGACACCGTACGAGGCAGCTGTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CCA 90 bp | AGTAGCCTTCTGGTCTGCGCAGTTGCAACTCTCACAGGCTGGGGCTaGAGAGCCGCCTCTGGACCCTTGCTGCACCTTGTCAGATGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSLLVCAVATLTGWG*RAASGPLLHLVRCR Trigger: CCTGCATCTGACAAGGTGCAGCAAGGGTCCAGAGGCGGCTCTCCAGCCCCAGCCTGTGAGAGTTGCAACTGCGCAGACCAGAAGGCTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CAA 90 bp | CCTCCTCAGAAAACCACCAGCCTCGAGGCTGCTCCTCCGGAGAACAGGGCCCTGCAAGACTCGGAAGTCTaGAACGGAGGTGTCCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPQKTTSLEAAPPENRALQDSEV*NGGVHG Trigger: CCCATGGACACCTCCGTTCAAGACTTCCGAGTCTTG...CAGGGCCCTGTTCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTTCTGAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CCA 90 bp | TGTCCTTCAGGGCCACAGCTGCCTCGTACGGTGTCAGCAGTGGCTTaGGAAAGGCTGAACCCCAGTCAATGGAGAGGCGTGGACATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CPSGPQLPRTVSAVA*ERLNPSQWRGVDMP Trigger: TGGCATGTCCACGCCTCTCCATTGACTGGGGTTCAGCCTTTCCCAAGCCACTGCTGACACCGTACGAGGCAGCTGTGGCCCTGAAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CAA 90 bp | CCTCCTGCAGACCCCTGCACACTGTGGACTCTTCCAGAGCAGAGAAAACATCGGGACCCTTGCTGCACCTaGTCAGATGCAGGCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPADPCTLWTLPEQRKHRDPCCT*SDAGWQ Trigger: CTGCCAGCCTGCATCTGACAAGGTGCAGCAAGGGTC...CCGATGTTTTCTCTGCTCTGGAAGAGTCCACAGTGTGCAGGGGTCTGCAGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS GCA 90 bp | GTGCTCGGTCCCGACCGTAGTTCACTGTCCATGGCCCTAAGGAGCTaGCAGAGTAGAAGTCCATGGGGTAGGGTTGCTGCCAAGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: VLGPDRSSLSMALRS*QSRSPWGRVAAKKC Trigger: ACATTTCTTGGCAGCAACCCTACCCCATGGACTTCTACTCTGGCAGCTCCTTAGGGCCATGGACAGTGAACTACGGTCGGGACCGAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CCA 90 bp | AGTGAGCTGCCTGGGGTAAAGGTGAGGCGGACCGAGTCCAGAAGGTaGGCAGTGTCTATCCGGATATCCACGAAGACATACAAGACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SELPGVKVRRTESRR*AVSIRISTKTYKTR Trigger: CCGAGTCTTGTATGTCTTCGTGGATATCCGGATAGACACTGCCCACCTTCTGGACTCGGTCCGCCTCACCTTTACCCCAGGCAGCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044949.11 ENSMUST00000139958.2 |
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| CDS-3UTR CAA 90 bp | GTTTGGTTTGGTGCTGCCCCAGGATCGGGGCAGCAGGAGAAAGGCATTCAACATATAAGGCCCCAGGATTaGGCTGAGCGTGCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VWFGAAPGSGQQEKGIQHIRPQD*AERAAA Trigger: TGCTGCTGCACGCTCAGCCAAATCCTGGGGCCTTAT...ATGTTGAATGCCTTTCTCCTGCTGCCCCGATCCTGGGGCAGCACCAAACCAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS TCA 90 bp | GTGGACATGCCACCTGCACCCACACATCCACCTCAGGAAGTAGACTaGGCTTGCTGGGGAAGATCTCAGAGAGCAACAGCCTCACGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VDMPPAPTHPPQEVD*ACWGRSQRATASRK Trigger: CTTTCGTGAGGCTGTTGCTCTCTGAGATCTTCCCCAGCAAGCTCAGTCTACTTCCTGAGGTGGATGTGTGGGTGCAGGTGGCATGTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CCA 90 bp | CCCAGGATTTGGCTGAGCGTGCAGCAGCAATGGCTTCCTGGCGAGTaGCCTGCATGCGCTGATGGTCATAGTATTCTCTGGATAGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: PRIWLSVQQQWLPGE*PACADGHSILWIGL Trigger: AAGTCCTATCCAGAGAATACTATGACCATCAGCGCATGCAGGCCACTCGCCAGGAAGCCATTGCTGCTGCACGCTCAGCCAAATCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044949.11 ENSMUST00000139958.2 |
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| CDS CCA 90 bp | AGTTCACTGTCCATGGCCCTAAGGAGCTGCCAGAGTAGAAGTCCATaGGGTAGGGTTGCTGCCAAGAAATGTCCTTCAGGGCCACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSLSMALRSCQSRSP*GRVAAKKCPSGPQL Trigger: CAGCTGTGGCCCTGAAGGACATTTCTTGGCAGCAACCCTACCCCATGGACTTCTACTCTGGCAGCTCCTTAGGGCCATGGACAGTGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS-3UTR CAA 90 bp | TCGGCTTCCTCCTCAGAAAACCACCAGCCTCGAGGCTGCTCCTCCGGAGAACAGGCAGGTATATTAGGGTaGGCAATCATGACAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SASSSENHQPRGCSSGEQAGILG*AIMTDS Trigger: GGAGTCTGTCATGATTGCCAACCCTAATATACCTGC...CTGTTCTCCGGAGGAGCAGCCTCGAGGCTGGTGGTTTTCTGAGGAGGAAGCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS GCA 90 bp | ACAGCTGTGACCATAGTGCACCAGGAAGTCAACTCCCAAGGCCCTTaGAGTGAAGTCATCCACACAGCAAGCCCCATAGGTGACATCACC | + |
|
Preference number: 5 (lower is better) Translates to: TAVTIVHQEVNSQGP*SEVIHTASPIGDIT Trigger: GGTGATGTCACCTATGGGGCTTGCTGTGTGGATGACTTCACTGCAAGGGCCTTGGGAGTTGACTTCCTGGTGCACTATGGTCACAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044949.11 ENSMUST00000139958.2 |
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| CDS-3UTR CAA 90 bp | GTGGGTGAGGGTGACGGCTCCAAGGAATCGGCTAGCCAATTGCATACTCTCCTGTCTCTGGATAGGACTTaGCCATATGGGTCATACCGG | + |
|
Preference number: 5 (lower is better) Translates to: VGEGDGSKESASQLHTLLSLDRT*PYGSYR Trigger: CCGGTATGACCCATATGGCAAAGTCCTATCCAGAGA...CAGGAGAGTATGCAATTGGCTAGCCGATTCCTTGGAGCCGTCACCCTCACCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CCA 90 bp | CCACGAAGACATACAAGACTCGGAAGTCTTGAACGGAGGTGTCCATaGGGACTAGACAGCTGTGACCATAGTGCACCAGGAAGTCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: PRRHTRLGSLERRCP*GLDSCDHSAPGSQL Trigger: GAGTTGACTTCCTGGTGCACTATGGTCACAGCTGTCTAGTCCCCATGGACACCTCCGTTCAAGACTTCCGAGTCTTGTATGTCTTCGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044949.11 ENSMUST00000139958.2 |
||
| CDS GCA 72 bp | CAGGCTGGGGCTGGAGAGCCGCCTCTGGACCCTTGCTaGACCTTGTCAGATGCAGGCTGGCAGAGACCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: QAGAGEPPLDPC*TLSDAGWQRPR Trigger: TCGGGGTCTCTGCCAGCCTGCATCTGACAAGGTGCAGCAAGGGTCCAGAGGCGGCTCTCCAGCCCCAGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
||
| CDS CCA 72 bp | AGAGATGCGACCTCTGCCAGGGCCGACTCGGCTTCCTaGCTCCGCAGTCTCGGACACAACCAGCGCCGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RDATSARADSAS*LRSLGHNQRRH Trigger: ATGGCGGCGCTGGTTGTGTCCGAGACTGCGGAGCCAGGAAGCCGAGTCGGCCCTGGCAGAGGTCGCATCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
||
| CDS CAA 72 bp | GGGGCTGGAGAGCCGCCTCTGGACCCTTGCTGCACCTaGTCAGATGCAGGCTGGCAGAGACCCCGAGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GAGEPPLDPCCT*SDAGWQRPRGA Trigger: AGCACCTCGGGGTCTCTGCCAGCCTGCATCTGACAAGGTGCAGCAAGGGTCCAGAGGCGGCTCTCCAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
||
| CDS CAA 72 bp | CTCACAGGCTGGGGCTGGAGAGCCGCCTCTGGACCCTaGCTGCACCTTGTCAGATGCAGGCTGGCAGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: LTGWGWRAASGP*LHLVRCRLAET Trigger: GGTCTCTGCCAGCCTGCATCTGACAAGGTGCAGCAAGGGTCCAGAGGCGGCTCTCCAGCCCCAGCCTGTGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
||
| CDS CAA 72 bp | CAGGGAGCCGGCGAAGTAGCCTTCTGGTCTGCGCAGTaGCAACTCTCACAGGCTGGGGCTGGAGAGCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QGAGEVAFWSAQ*QLSQAGAGEPP Trigger: AGGCGGCTCTCCAGCCCCAGCCTGTGAGAGTTGCAACTGCGCAGACCAGAAGGCTACTTCGCCGGCTCCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
||
| CDS CAA 90 bp | GTTGCAACTCTCACAGGCTGGGGCTGGAGAGCCGCCTCTGGACCCTaGCTGCACCTTGTCAGATGCAGGCTGGCAGAGACCCCGAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VATLTGWGWRAASGP*LHLVRCRLAETPRC Trigger: GCACCTCGGGGTCTCTGCCAGCCTGCATCTGACAAGGTGCAGCAAGGGTCCAGAGGCGGCTCTCCAGCCCCAGCCTGTGAGAGTTGCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS GCA 72 bp | CACCTTGTCAGATGCAGGCTGGCAGAGACCCCGAGGTaGTCGGTCCCGACCGTAGTTCACTGTCCATGGCCC | + |
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Preference number: 6 (lower is better) Translates to: HLVRCRLAETPR*SVPTVVHCPWP Trigger: GGGCCATGGACAGTGAACTACGGTCGGGACCGAGCACCTCGGGGTCTCTGCCAGCCTGCATCTGACAAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CCA 72 bp | TGCAACTCTCACAGGCTGGGGCTGGAGAGCCGCCTCTaGACCCTTGCTGCACCTTGTCAGATGCAGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: CNSHRLGLESRL*TLAAPCQMQAG Trigger: GCCAGCCTGCATCTGACAAGGTGCAGCAAGGGTCCAGAGGCGGCTCTCCAGCCCCAGCCTGTGAGAGTTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CCA 72 bp | CTGGTCTGCGCAGTTGCAACTCTCACAGGCTGGGGCTaGAGAGCCGCCTCTGGACCCTTGCTGCACCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LVCAVATLTGWG*RAASGPLLHLV Trigger: GACAAGGTGCAGCAAGGGTCCAGAGGCGGCTCTCCAGCCCCAGCCTGTGAGAGTTGCAACTGCGCAGACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CCA 72 bp | AGCCTTCTGGTCTGCGCAGTTGCAACTCTCACAGGCTaGGGCTGGAGAGCCGCCTCTGGACCCTTGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: SLLVCAVATLTG*GWRAASGPLLH Trigger: GTGCAGCAAGGGTCCAGAGGCGGCTCTCCAGCCCCAGCCTGTGAGAGTTGCAACTGCGCAGACCAGAAGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CCA 72 bp | GGGCCACAGCTGCCTCGTACGGTGTCAGCAGTGGCTTaGGAAAGGCTGAACCCCAGTCAATGGAGAGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: GPQLPRTVSAVA*ERLNPSQWRGV Trigger: CACGCCTCTCCATTGACTGGGGTTCAGCCTTTCCCAAGCCACTGCTGACACCGTACGAGGCAGCTGTGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS TCA 72 bp | GCCCAAGGTTCCCAGAATAAGGCCCCAGGATTTGGCTaGGCGTGCAGCAGCAATGGCTTCCTGGCGAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: AQGSQNKAPGFG*ACSSNGFLASG Trigger: GCCACTCGCCAGGAAGCCATTGCTGCTGCACGCTCAGCCAAATCCTGGGGCCTTATTCTGGGAACCTTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CAA 72 bp | TGGCGGCCCAAGGTTCCCAGAATAAGGCCCCAGGATTaGGCTGAGCGTGCAGCAGCAATGGCTTCCTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: WRPKVPRIRPQD*AERAAAMASWR Trigger: TCGCCAGGAAGCCATTGCTGCTGCACGCTCAGCCAAATCCTGGGGCCTTATTCTGGGAACCTTGGGCCGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CAA 72 bp | AGGGCCACAGCTGCCTCGTACGGTGTCAGCAGTGGCTaGGGAAAGGCTGAACCCCAGTCAATGGAGAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: RATAASYGVSSG*GKAEPQSMERR Trigger: ACGCCTCTCCATTGACTGGGGTTCAGCCTTTCCCAAGCCACTGCTGACACCGTACGAGGCAGCTGTGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS GCA 72 bp | GGGTTGCTGCCAAGAAATGTCCTTCAGGGCCACAGCTaGCTCGTACGGTGTCAGCAGTGGCTTGGGAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GLLPRNVLQGHS*LVRCQQWLGKG Trigger: GCCTTTCCCAAGCCACTGCTGACACCGTACGAGGCAGCTGTGGCCCTGAAGGACATTTCTTGGCAGCAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS GCA 72 bp | CCCGACCGTAGTTCACTGTCCATGGCCCTAAGGAGCTaGCAGAGTAGAAGTCCATGGGGTAGGGTTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PDRSSLSMALRS*QSRSPWGRVAA Trigger: GGCAGCAACCCTACCCCATGGACTTCTACTCTGGCAGCTCCTTAGGGCCATGGACAGTGAACTACGGTCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CCA 72 bp | TGGCTGAGCGTGCAGCAGCAATGGCTTCCTGGCGAGTaGCCTGCATGCGCTGATGGTCATAGTATTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: WLSVQQQWLPGE*PACADGHSILW Trigger: CCAGAGAATACTATGACCATCAGCGCATGCAGGCCACTCGCCAGGAAGCCATTGCTGCTGCACGCTCAGCCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044949.11 ENSMUST00000139958.2 |
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| CDS TCA 72 bp | AGCTCCTGTGCAGCTGCCTGTAAGGTTGACACAAACTaGATGGTGCTGACCAGAGCGAGTGAGCTGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SSCAAACKVDTN*MVLTRASELPG Trigger: CCCAGGCAGCTCACTCGCTCTGGTCAGCACCATTCAGTTTGTGTCAACCTTACAGGCAGCTGCACAGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044949.11 ENSMUST00000139958.2 |
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| CDS TCA 72 bp | CCACCTGCACCCACACATCCACCTCAGGAAGTAGACTaGGCTTGCTGGGGAAGATCTCAGAGAGCAACAGCC | + |
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Preference number: 6 (lower is better) Translates to: PPAPTHPPQEVD*ACWGRSQRATA Trigger: GGCTGTTGCTCTCTGAGATCTTCCCCAGCAAGCTCAGTCTACTTCCTGAGGTGGATGTGTGGGTGCAGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CCA 72 bp | CCTGGGGTAAAGGTGAGGCGGACCGAGTCCAGAAGGTaGGCAGTGTCTATCCGGATATCCACGAAGACATAC | + |
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Preference number: 6 (lower is better) Translates to: PGVKVRRTESRR*AVSIRISTKTY Trigger: GTATGTCTTCGTGGATATCCGGATAGACACTGCCCACCTTCTGGACTCGGTCCGCCTCACCTTTACCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044949.11 ENSMUST00000139958.2 |
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| CDS CCA 72 bp | GGCCATCTCCAAGATACACAACAGCTTCCACTTCCTTaGATAGCCGAGGGGATGTGCAGCCTAGGATCTCCC | + |
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Preference number: 6 (lower is better) Translates to: GHLQDTQQLPLP*IAEGMCSLGSP Trigger: GGGAGATCCTAGGCTGCACATCCCCTCGGCTATCCAAGGAAGTGGAAGCTGTTGTGTATCTTGGAGATGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044949.11 ENSMUST00000139958.2 |
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| CDS CCA 72 bp | TCCATGGCCCTAAGGAGCTGCCAGAGTAGAAGTCCATaGGGTAGGGTTGCTGCCAAGAAATGTCCTTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SMALRSCQSRSP*GRVAAKKCPSG Trigger: CCCTGAAGGACATTTCTTGGCAGCAACCCTACCCCATGGACTTCTACTCTGGCAGCTCCTTAGGGCCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CAA 72 bp | CGGCCATCTCCAAGATACACAACAGCTTCCACTTCCTaGGATAGCCGAGGGGATGTGCAGCCTAGGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: RPSPRYTTASTS*DSRGDVQPRIS Trigger: GGAGATCCTAGGCTGCACATCCCCTCGGCTATCCAAGGAAGTGGAAGCTGTTGTGTATCTTGGAGATGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044949.11 ENSMUST00000139958.2 |
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| CDS GCA 72 bp | ACCATAGTGCACCAGGAAGTCAACTCCCAAGGCCCTTaGAGTGAAGTCATCCACACAGCAAGCCCCATAGGT | + |
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Preference number: 6 (lower is better) Translates to: TIVHQEVNSQGP*SEVIHTASPIG Trigger: ACCTATGGGGCTTGCTGTGTGGATGACTTCACTGCAAGGGCCTTGGGAGTTGACTTCCTGGTGCACTATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044949.11 ENSMUST00000139958.2 |
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| CDS TCA 72 bp | AACAGCCTCACGAAAGGAAGTCCCAAGTTTCTGAGCTaGGATTCCAAGTGCTCCAGGATCTTGGGACTGCCC | + |
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Preference number: 6 (lower is better) Translates to: NSLTKGSPKFLS*DSKCSRILGLP Trigger: GGGCAGTCCCAAGATCCTGGAGCACTTGGAATCTCAGCTCAGAAACTTGGGACTTCCTTTCGTGAGGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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| CDS CCA 72 bp | GGCATTTGTAAGGCCACCTTCTTGGCCTGGGCCTGCTaGATTCTCCAGATGGTTTTGGGGATCTCAAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: GICKATFLAWAC*ILQMVLGISKL Trigger: CAACTTTGAGATCCCCAAAACCATCTGGAGAATCCAGCAGGCCCAGGCCAAGAAGGTGGCCTTACAAATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044949.11 ENSMUST00000139958.2 |
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| CDS CCA 72 bp | CATACAAGACTCGGAAGTCTTGAACGGAGGTGTCCATaGGGACTAGACAGCTGTGACCATAGTGCACCAGGA | + |
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Preference number: 6 (lower is better) Translates to: HTRLGSLERRCP*GLDSCDHSAPG Trigger: TCCTGGTGCACTATGGTCACAGCTGTCTAGTCCCCATGGACACCTCCGTTCAAGACTTCCGAGTCTTGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044949.11 ENSMUST00000139958.2 |
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| CDS TCA 72 bp | AGAGCAACAGCCTCACGAAAGGAAGTCCCAAGTTTCTaGGCTGAGATTCCAAGTGCTCCAGGATCTTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: RATASRKEVPSF*AEIPSAPGSWD Trigger: GTCCCAAGATCCTGGAGCACTTGGAATCTCAGCTCAGAAACTTGGGACTTCCTTTCGTGAGGCTGTTGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044949.11 |
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