Pregenerated sensors for DPF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024826Ensembl transcript IDs: ENSMUST00000025746.14, ENSMUST00000118623.2, ENSMUST00000136983.8, ENSMUST00000236970.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCTCGGGGCTAGAGGCAGTCAGAGCTGCCACCTCCCTGTGCTGTTaGCAACGGAGGTTGGCAGGACTACAGAGTGAAAGAGGAGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: GSGLEAVRAATSLCC*QRRLAGLQSERGER Trigger: CCTCTCTCCTCTTTCACTCTGTAGTCCTGCCAACCTCCGTTGGCAACAGCACAGGGAGGTGGCAGCTCTGACTGCCTCTAGCCCCGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR GCA 90 bp | CCTGAGGGCTCGGGGCTAGAGGCAGTCAGAGCTGCCACCTCCCTGTaGTGTTGCCAACGGAGGTTGGCAGGACTACAGAGTGAAAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: PEGSGLEAVRAATSL*CCQRRLAGLQSERG Trigger: TCCTCTTTCACTCTGTAGTCCTGCCAACCTCCGTTGGCAACAGCACAGGGAGGTGGCAGCTCTGACTGCCTCTAGCCCCGAGCCCTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR TCA 90 bp | ACAGTTGACCTCCCCAGCTCCTGGAGCTGGAGCTACAGGTGGTTGTaGGCCACCGGATTTGAGTGCTGGGAACCAAACTTGGCCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: TVDLPSSWSWSYRWL*ATGFECWEPNLALC Trigger: GCAGAGGGCCAAGTTTGGTTCCCAGCACTCAAATCCGGTGGCTCACAACCACCTGTAGCTCCAGCTCCAGGAGCTGGGGAGGTCAACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
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| 3UTR GCA 90 bp | AGGGGCAATGGAAACCAAGGTAGAGAGGAGAGCAACGGCCTTAGATaGAGGGGAGCTGGGTGGCACATCAGGAGGAGTTCTGGTTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: RGNGNQGREESNGLR*RGAGWHIRRSSGSG Trigger: ACCAGAACCAGAACTCCTCCTGATGTGCCACCCAGCTCCCCTGCATCTAAGGCCGTTGCTCTCCTCTCTACCTTGGTTTCCATTGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025746.14 |
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| 3UTR TCA 90 bp | GGTGCCCGAGAACATTCTAGCTCAAGCACAGAACCCCATGTAGCATaGCAGAGGACAGGGGACTGCTTTGGCAGGAGGCAAAGGGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: GAREHSSSSTEPHVA*QRTGDCFGRRQREA Trigger: TGCTTCCCTTTGCCTCCTGCCAAAGCAGTCCCCTGTCCTCTGTCATGCTACATGGGGTTCTGTGCTTGAGCTAGAATGTTCTCGGGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR CCA 90 bp | CCCTCTCCCTACAAAAGCAAAGGGACTAAGGATGGGGGCAGAAGATaGGAAGTTCTGAGGATAGGAAATGTCTGGGTAGCCAGAGCGCAC | + |
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Preference number: 1 (lower is better) Translates to: PSPYKSKGTKDGGRR*EVLRIGNVWVARAH Trigger: GTGCGCTCTGGCTACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTGCCCCCATCCTTAGTCCCTTTGCTTTTGTAGGGAGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR GCA 90 bp | CCAAACTTGGCCCTCTGCAAGAACAACGAGCATCCTCTCCTCTGCTaGGCTCTCTCTCCAGGCTTAACTCATAACTCCTTGGAGTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: PNLALCKNNEHPLLC*ALSPGLTHNSLEFK Trigger: TTTAAACTCCAAGGAGTTATGAGTTAAGCCTGGAGAGAGAGCGCAGCAGAGGAGAGGATGCTCGTTGTTCTTGCAGAGGGCCAAGTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCAGAGAGAAGTTGGACCCACAGGTCAGCCCTGGAGCAGCACGCTGCTCCAGCAACGGCCTTAGATaGAGGGGAGCTGGGTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: ESREKLDPQVSPGAARCSSNGLR*RGAGWH Trigger: GTGCCACCCAGCTCCCCTGCATCTAAGGCCGTTGCT...GGAGCAGCGTGCTGCTCCAGGGCTGACCTGTGGGTCCAACTTCTCTCTGCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGCCCACAGCCAAGGGGGAAGCCCACTCTCTAGAGTACTGCAGAGGACTGGAACCCCATGTAGCATaGCAGAGGACAGGGGACTGC | + |
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Preference number: 2 (lower is better) Translates to: GLPTAKGEAHSLEYCRGLEPHVA*QRTGDC Trigger: GCAGTCCCCTGTCCTCTGTCATGCTACATGGGGTTC...CAGTCCTCTGCAGTACTCTAGAGAGTGGGCTTCCCCCTTGGCTGTGGGCAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGGAAAGGCCCAGCCTATCACAGGGGTGAACTaGAGGCAGGACGGATGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GKCHSASSLQLLPGKAQPITGVN*RQDGCP Trigger: AGGGCATCCGTCCTGCCTGCAGTTCACCCCTGTGAT...AGGCTGGGCCTTTCCTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025746.14 |
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| 3UTR-3UTR CCA 90 bp | AGCACAGGGAGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCCACAGGTCAGCCCTaGAGCAGCACGCTGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: STGRTGLKLLVPLWDRAEPTGQP*SSTLLL Trigger: AAGGAGCAGCGTGCTGCTCCAGGGCTGACCTGTGGG...CTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR GCA 90 bp | AGCACAGGGAGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGAGCAACGGCCTTAGATaGAGGGGAGCTGGGTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: STGRTGLKLLVPLWDRAESNGLR*RGAGWH Trigger: GTGCCACCCAGCTCCCCTGCATCTAAGGCCGTTGCT...CTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCAGGAGGTAGCAACGGCCTTAGATaGAGGGGAGCTGGGTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: RTGLKLLVPLWDRAEPGGSNGLR*RGAGWH Trigger: GTGCCACCCAGCTCCCCTGCATCTAAGGCCGTTGCT...ACCTCCTGGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCAGGAGGTCCAGCTCACTCCAGCTaGTTCCAGGAAAGGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: RTGLKLLVPLWDRAEPGGPAHSS*FQERPS Trigger: GCTGGGCCTTTCCTGGAAGCAGCTGGAGTGAGCTGG...ACCTCCTGGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCACAGGGAGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGACCCACAGGTCAGCCCTaGAGCAGCACGCTGCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: KHREDRFEAARPFVGQGRPTGQP*SSTLLL Trigger: AAGGAGCAGCGTGCTGCTCCAGGGCTGACCTGTGGG...TCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGTGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAGAGCAGAGAGAAGTTGGACCCACAGGTCAGCCCTGGAGCAGCACGCTGCTGGCAGGACTACAGAGTaGAAGAGGAGAGAGGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: WRAERSWTHRSALEQHAAGRTTE*KRREGQ Trigger: TTGCCCCTCTCTCCTCTTTCACTCTGTAGTCCTGCC...AGCAGCGTGCTGCTCCAGGGCTGACCTGTGGGTCCAACTTCTCTCTGCTCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGGGAGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCGGCAGGACTACAGAGTaGAAGAGGAGAGAGGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: HREDRFEAARPFVGQGRAGRTTE*KRREGQ Trigger: TTGCCCCTCTCTCCTCTTTCACTCTGTAGTCCTGCC...GGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR TCA 90 bp | GCTAGCGTGCAAGGAAAGGGGACCATCCTGTGTCCTGGGAGCCAGGATACACAGGAACCCCATGTAGCATaGCAGAGGACAGGGGACTGC | + |
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Preference number: 2 (lower is better) Translates to: ASVQGKGTILCPGSQDTQEPHVA*QRTGDC Trigger: GCAGTCCCCTGTCCTCTGTCATGCTACATGGGGTTC...CTGTGTATCCTGGCTCCCAGGACACAGGATGGTCCCCTTTCCTTGCACGCTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCAGGAGGTCAGAGGACAGGGGACTaGTTTGGCAGGAGGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: RTGLKLLVPLWDRAEPGGQRTGD*FGRRQR Trigger: CCTTTGCCTCCTGCCAAAGCAGTCCCCTGTCCTCTG...ACCTCCTGGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR CCA 90 bp | GCTAGCGTGCAAGGAAAGGGGACCATCCTGTGTCCTGGGAGCCAGGATACACAGGACAGGGGACTGCTTTaGCAGGAGGCAAAGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: ASVQGKGTILCPGSQDTQDRGLL*QEAKGS Trigger: GCTTCCCTTTGCCTCCTGCCAAAGCAGTCCCCTGTC...CTGTGTATCCTGGCTCCCAGGACACAGGATGGTCCCCTTTCCTTGCACGCTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCAGGAGGTGACAGGGGACTGCTTTaGCAGGAGGCAAAGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: RTGLKLLVPLWDRAEPGGDRGLL*QEAKGS Trigger: GCTTCCCTTTGCCTCCTGCCAAAGCAGTCCCCTGTC...ACCTCCTGGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCTGGGTAGCCAGAGCGCACCTCTGCTCCTTACTCCCTaGGGGCTCGGGGCTAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: QKMGSSEDRKCLGSQSAPLLLTP*GLGARG Trigger: GCCTCTAGCCCCGAGCCCTCAGGGAGTAAGGAGCAG...AGGTGCGCTCTGGCTACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGAGCCAGGAGGTGCCCGAGAACATTCTAGCTCAAGCACAGAACCCCATGTTGGGGGAAGAGGGGTaGGCAAGGCTTGAGACAAGT | + |
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Preference number: 2 (lower is better) Translates to: GQSQEVPENILAQAQNPMLGEEG*ARLETS Trigger: ACTTGTCTCAAGCCTTGCCCACCCCTCTTCCCCCAA...CATGGGGTTCTGTGCTTGAGCTAGAATGTTCTCGGGCACCTCCTGGCTCTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR CCA 90 bp | GCTAGCGTGCAAGGAAAGGGGACCATCCTGTGTCCTGGGAGCCAGGATACACAGTTGGGGGAAGAGGGGTaGGCAAGGCTTGAGACAAGT | + |
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Preference number: 2 (lower is better) Translates to: ASVQGKGTILCPGSQDTQLGEEG*ARLETS Trigger: ACTTGTCTCAAGCCTTGCCCACCCCTCTTCCCCCAA...CTGTGTATCCTGGCTCCCAGGACACAGGATGGTCCCCTTTCCTTGCACGCTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR TCA 90 bp | GCTAGCGTGCAAGGAAAGGGGACCATCCTGTGTCCTGGGAGCCAGGATACACAGTTAAGGACAGGAGGCTaGATGCCCAGGTTCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: ASVQGKGTILCPGSQDTQLRTGG*MPRFRK Trigger: CTTCCTGAACCTGGGCATTCAGCCTCCTGTCCTTAA...CTGTGTATCCTGGCTCCCAGGACACAGGATGGTCCCCTTTCCTTGCACGCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAGCAACGGCCTTAGATGCAGGGGAGCTGGGTGGCACATCAGGAGGAGTTCAGACATGGAAGGAGTaGGACAGTACATGTGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: RRATALDAGELGGTSGGVQTWKE*DSTCGS Trigger: GCTACCACATGTACTGTCTCACTCCTTCCATGTCTG...AACTCCTCCTGATGTGCCACCCAGCTCCCCTGCATCTAAGGCCGTTGCTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025746.14 |
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| 3UTR-3UTR TCA 90 bp | TATGAAAAGGTCCTGGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGGGCAGGACTACAGAGTaGAAGAGGAGAGAGGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: YEKVLASATQPAHSSCFQGRTTE*KRREGQ Trigger: TTGCCCCTCTCTCCTCTTTCACTCTGTAGTCCTGCC...CTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCCAGGACCTTTTCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR TCA 90 bp | TATGAAAAGGTCCTGGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGCCAAGGCAGGCAGAGTaGATGCACTTCTTGGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: YEKVLASATQPAHSSCFQPRQAE*MHFLES Trigger: GCTCTCCAAGAAGTGCATTCACTCTGCCTGCCTTGG...CTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCCAGGACCTTTTCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCAGGAGGTAGCAGAACTAGGGTATaGAAAGGTCCTGGCAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: RTGLKLLVPLWDRAEPGGSRTRV*KGPGKC Trigger: GCACTTGCCAGGACCTTTTCATACCCTAGTTCTGCT...ACCTCCTGGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCTGGGTAGCCAGAGCGCACCTCCAAGGCAGGCAGAGTaGATGCACTTCTTGGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: QKMGSSEDRKCLGSQSAPPRQAE*MHFLES Trigger: GCTCTCCAAGAAGTGCATTCACTCTGCCTGCCTTGG...AGGTGCGCTCTGGCTACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAGCTTCTGGGTTCACTTTAACCAGGAGACACTGCAGTGCCATAGATCTGCCCAGAGGACAGGGGACTaGTTTGGCAGGAGGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: TSFWVHFNQETLQCHRSAQRTGD*FGRRQR Trigger: CCTTTGCCTCCTGCCAAAGCAGTCCCCTGTCCTCTG...GGCAGATCTATGGCACTGCAGTGTCTCCTGGTTAAAGTGAACCCAGAAGCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCTGGGTAGCCAGAGCGCACCTAGGAAAGGCCCAGCCTaGCTCATCTCTGGGGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: QKMGSSEDRKCLGSQSAPRKGPA*LISGAK Trigger: TTTTGCCCCAGAGATGAGCCAGGCTGGGCCTTTCCT...AGGTGCGCTCTGGCTACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTTCTGGGTTCACTTTAACCAGGAGACACTGCAGTGCCATAGATCTGCCGTTAAGGACAGGAGGCTaGATGCCCAGGTTCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QASGFTLTRRHCSAIDLPLRTGG*MPRFRK Trigger: CTTCCTGAACCTGGGCATTCAGCCTCCTGTCCTTAA...CGGCAGATCTATGGCACTGCAGTGTCTCCTGGTTAAAGTGAACCCAGAAGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
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| 3UTR-3UTR GCA 90 bp | GCTAGCGTGCAAGGAAAGGGGACCATCCTGTGTCCTGGGAGCCAGGATACACAGTTGAGACAAGTGAGCTaGTCTCATATTCCTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: ASVQGKGTILCPGSQDTQLRQVS*SHIPSQ Trigger: CTGAGAAGGAATATGAGAGCAGCTCACTTGTCTCAA...CTGTGTATCCTGGCTCCCAGGACACAGGATGGTCCCCTTTCCTTGCACGCTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGGGACTAAGGATGGGGGCAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCCCAAGGCAGGCAGAGTaGATGCACTTCTTGGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: KGTKDGGRRWEVLRIGNVPRQAE*MHFLES Trigger: GCTCTCCAAGAAGTGCATTCACTCTGCCTGCCTTGG...GACATTTCCTATCCTCAGAACTTCCCATCTTCTGCCCCCATCCTTAGTCCCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCACAAACAAGCTTCTGGGTTCACTTTAACCAGGAGACACTGCAGTGCCATAGAACCCCATGTAGCATaGCAGAGGACAGGGGACTGC | + |
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Preference number: 2 (lower is better) Translates to: KHKQASGFTLTRRHCSAIEPHVA*QRTGDC Trigger: GCAGTCCCCTGTCCTCTGTCATGCTACATGGGGTTC...TATGGCACTGCAGTGTCTCCTGGTTAAAGTGAACCCAGAAGCTTGTTTGTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTAAAGCACAAACAAGCTTCTGGGTTCACTTTAACCAGGAGACACTGCAGGACCATCCTGTGTCCTaGGAGCCAGGATACACAGGC | + |
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Preference number: 2 (lower is better) Translates to: EFKAQTSFWVHFNQETLQDHPVS*EPGYTG Trigger: GCCTGTGTATCCTGGCTCCCAGGACACAGGATGGTC...CTGCAGTGTCTCCTGGTTAAAGTGAACCCAGAAGCTTGTTTGTGCTTTAAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
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| 3UTR CAA 90 bp | CCTCTCCTCTGCTGCGCTCTCTCTCCAGGCTTAACTCATAACTCCTaGGAGTTTAAAGCACAAACAAGCTTCTGGGTTCACTTTAACCAG | + |
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Preference number: 2 (lower is better) Translates to: PLLCCALSPGLTHNS*EFKAQTSFWVHFNQ Trigger: CTGGTTAAAGTGAACCCAGAAGCTTGTTTGTGCTTTAAACTCCAAGGAGTTATGAGTTAAGCCTGGAGAGAGAGCGCAGCAGAGGAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
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| 3UTR GCA 72 bp | AAGTTGGACCCACAGGTCAGCCCTGGAGCAGCACGCTaGTCCTTACTCCCTGAGGGCTCGGGGCTAGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: KLDPQVSPGAAR*SLLPEGSGLEA Trigger: TGCCTCTAGCCCCGAGCCCTCAGGGAGTAAGGAGCAGCGTGCTGCTCCAGGGCTGACCTGTGGGTCCAACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR-3UTR CAA 90 bp | CACAGGGAGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCCACCTCCCTGTGCTGTaGCCAACGGAGGTTGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: HREDRFEAARPFVGQGRAHLPVL*PTEVGR Trigger: CCTGCCAACCTCCGTTGGCAACAGCACAGGGAGGTG...GGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| 3UTR TCA 72 bp | GATGAGTGGGCAGGTGGGTGTTTGCAGGAGCACAGTTaGCCTCCCCAGCTCCTGGAGCTGGAGCTACAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: DEWAGGCLQEHS*PPQLLELELQV Trigger: CACCTGTAGCTCCAGCTCCAGGAGCTGGGGAGGTCAACTGTGCTCCTGCAAACACCCACCTGCCCACTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAGGGAGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCGACGTGCCGCAGAGGTaGCAGCACTTGCATTCGATG | + |
|
Preference number: 3 (lower is better) Translates to: HREDRFEAARPFVGQGRADVPQR*QHLHSM Trigger: CATCGAATGCAAGTGCTGCAACCTCTGCGGCACGTC...GGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025746.14 |
||
| 3UTR-3UTR CAA 90 bp | CACAGGGAGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCGAGAGCAGAGAGAAGTaGGACCCACAGGTCAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HREDRFEAARPFVGQGRAESREK*DPQVSP Trigger: AGGGCTGACCTGTGGGTCCAACTTCTCTCTGCTCTC...GGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCAGGAGGTGGACAGGGGACTGCTTaGGCAGGAGGCAAAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RTGLKLLVPLWDRAEPGGGQGTA*AGGKGK Trigger: CTTCCCTTTGCCTCCTGCCAAAGCAGTCCCCTGTCC...ACCTCCTGGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTAGCGTGCAAGGAAAGGGGACCATCCTGTGTCCTGGGAGCCAGGATACACAGGGACAGGGGACTGCTTaGGCAGGAGGCAAAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ASVQGKGTILCPGSQDTQGQGTA*AGGKGK Trigger: CTTCCCTTTGCCTCCTGCCAAAGCAGTCCCCTGTCC...CTGTGTATCCTGGCTCCCAGGACACAGGATGGTCCCCTTTCCTTGCACGCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| 3UTR CCA 72 bp | GAGCTGCCACCTCCCTGTGCTGTTGCCAACGGAGGTTaGCAGGACTACAGAGTGAAAGAGGAGAGAGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ELPPPCAVANGG*QDYRVKEERGA Trigger: TGCCCCTCTCTCCTCTTTCACTCTGTAGTCCTGCCAACCTCCGTTGGCAACAGCACAGGGAGGTGGCAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAGAGCCAGGAGGTGCCCGAGAACATTCTAGCTCAAGCACAGAACCCCATGGAGAGCAGAGAGAAGTaGGACCCACAGGTCAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GQSQEVPENILAQAQNPMESREK*DPQVSP Trigger: AGGGCTGACCTGTGGGTCCAACTTCTCTCTGCTCTC...CATGGGGTTCTGTGCTTGAGCTAGAATGTTCTCGGGCACCTCCTGGCTCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| 3UTR CCA 72 bp | CAGCTCACTCCAGCTGCTTCCAGGAAAGGCCCAGCCTaGCTCATCTCTGGGGCAAAACCCTGGAAACCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QLTPAASRKGPA*LISGAKPWKPK Trigger: CTTTGGTTTCCAGGGTTTTGCCCCAGAGATGAGCCAGGCTGGGCCTTTCCTGGAAGCAGCTGGAGTGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCTGGGTAGCCAGAGCGCACCTCACCTCCCTGTGCTGTaGCCAACGGAGGTTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QKMGSSEDRKCLGSQSAPHLPVL*PTEVGR Trigger: CCTGCCAACCTCCGTTGGCAACAGCACAGGGAGGTG...AGGTGCGCTCTGGCTACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| 3UTR GCA 72 bp | CTAGAGGCAGTCAGAGCTGCCACCTCCCTGTGCTGTTaGCAACGGAGGTTGGCAGGACTACAGAGTGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LEAVRAATSLCC*QRRLAGLQSER Trigger: TCTTTCACTCTGTAGTCCTGCCAACCTCCGTTGGCAACAGCACAGGGAGGTGGCAGCTCTGACTGCCTCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| 3UTR GCA 72 bp | TTGGCCCTCTGCAAGAACAACGAGCATCCTCTCCTCTaGTGCGCTCTCTCTCCAGGCTTAACTCATAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: LALCKNNEHPLL*CALSPGLTHNS Trigger: GGAGTTATGAGTTAAGCCTGGAGAGAGAGCGCAGCAGAGGAGAGGATGCTCGTTGTTCTTGCAGAGGGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCTGGGTAGCCAGAGCGCACCTACAGGGAGGACAGGTTaGAAGCTGCTCGTCCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: QKMGSSEDRKCLGSQSAPTGRTG*KLLVPL Trigger: CAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGT...AGGTGCGCTCTGGCTACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| 3UTR TCA 72 bp | GAACATTCTAGCTCAAGCACAGAACCCCATGTAGCATaGCAGAGGACAGGGGACTGCTTTGGCAGGAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: EHSSSSTEPHVA*QRTGDCFGRRQ Trigger: TTGCCTCCTGCCAAAGCAGTCCCCTGTCCTCTGTCATGCTACATGGGGTTCTGTGCTTGAGCTAGAATGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| 3UTR GCA 72 bp | CATCACAGAAAAGTAGCTGGTCATCGTTCTCCGACGTaGCGCAGAGGTTGCAGCACTTGCATTCGATGCACT | + |
|
Preference number: 3 (lower is better) Translates to: HHRKVAGHRSPT*RRGCSTCIRCT Trigger: AGTGCATCGAATGCAAGTGCTGCAACCTCTGCGGCACGTCGGAGAACGATGACCAGCTACTTTTCTGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025746.14 |
||
| 3UTR GCA 72 bp | AGCTTCTGGGTTCACTTTAACCAGGAGACACTGCAGTaGCATAGATCTGCCGCACCTCCGCCTACATATTCA | + |
|
Preference number: 3 (lower is better) Translates to: SFWVHFNQETLQ*HRSAAPPPTYS Trigger: TGAATATGTAGGCGGAGGTGCGGCAGATCTATGGCACTGCAGTGTCTCCTGGTTAAAGTGAACCCAGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
||
| 3UTR GCA 72 bp | AAACAAGCTTCTGGGTTCACTTTAACCAGGAGACACTaGAGTGCCATAGATCTGCCGCACCTCCGCCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: KQASGFTLTRRH*SAIDLPHLRLH Trigger: ATGTAGGCGGAGGTGCGGCAGATCTATGGCACTGCAGTGTCTCCTGGTTAAAGTGAACCCAGAAGCTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
||
| 3UTR GCA 72 bp | CACCCTGCACTGTGGACAATTCTGGCTTTGCAACTCTaGTTTGGCTTAGCAATCCGACAGGCAATGAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: HPALWTILALQL*FGLAIRQAMKR Trigger: CCTTTTCATTGCCTGTCGGATTGCTAAGCCAAAGCAGAGTTGCAAAGCCAGAATTGTCCACAGTGCAGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
||
| 3UTR TCA 72 bp | ATCTGGCTGGATATAAACTCACTCACGGTCTGCACATaGCACCCTGCACTGTGGACAATTCTGGCTTTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: IWLDINSLTVCT*HPALWTILALQ Trigger: TTGCAAAGCCAGAATTGTCCACAGTGCAGGGTGTCATGTGCAGACCGTGAGTGAGTTTATATCCAGCCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
||
| 3UTR GCA 72 bp | GGATATAAACTCACTCACGGTCTGCACATGACACCCTaGACTGTGGACAATTCTGGCTTTGCAACTCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GYKLTHGLHMTP*TVDNSGFATLL Trigger: AAGCAGAGTTGCAAAGCCAGAATTGTCCACAGTGCAGGGTGTCATGTGCAGACCGTGAGTGAGTTTATATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
||
| 3UTR CCA 72 bp | TACAAAAGCAAAGGGACTAAGGATGGGGGCAGAAGATaGGAAGTTCTGAGGATAGGAAATGTCTGGGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: YKSKGTKDGGRR*EVLRIGNVWVA Trigger: GGCTACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTGCCCCCATCCTTAGTCCCTTTGCTTTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| 3UTR CCA 72 bp | TGCACTGTGGACAATTCTGGCTTTGCAACTCTGCTTTaGCTTAGCAATCCGACAGGCAATGAAAAGGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: CTVDNSGFATLL*LSNPTGNEKVH Trigger: ATGAACCTTTTCATTGCCTGTCGGATTGCTAAGCCAAAGCAGAGTTGCAAAGCCAGAATTGTCCACAGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGTCAGAGCTGCCACCTCCCTGTGCTGTTGCCAACGGAGGTTGGCAGGACGGATCCTCAGGTGGGTaGGCTCGGCGCTTTTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RQSELPPPCAVANGGWQDGSSGG*ARRFFR Trigger: GCGGAAAAAGCGCCGAGCCCACCCACCTGAGGATCC...GTCCTGCCAACCTCCGTTGGCAACAGCACAGGGAGGTGGCAGCTCTGACTGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGCAGAGAGAAGTTGGACCCACAGGTCAGCCCTGGAGCAGCACGCTGCTCCCCTGGGATCCTCAGGTaGGTGGGCTCGGCGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESREKLDPQVSPGAARCSPGILR*VGSALF Trigger: AAAAAGCGCCGAGCCCACCCACCTGAGGATCCCAGG...GGAGCAGCGTGCTGCTCCAGGGCTGACCTGTGGGTCCAACTTCTCTCTGCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR CCA 90 bp | GGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGGAAAGGCCCAGCCTCCTGGGATCCTCAGGTaGGTGGGCTCGGCGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKCHSASSLQLLPGKAQPPGILR*VGSALF Trigger: AAAAAGCGCCGAGCCCACCCACCTGAGGATCCCAGG...AGGCTGGGCCTTTCCTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR GCA 90 bp | AGGCAGTCAGAGCTGCCACCTCCCTGTGCTGTTGCCAACGGAGGTTGGCAGGACATCACAGGGGTGAACTaGAGGCAGGACGGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQSELPPPCAVANGGWQDITGVN*RQDGCP Trigger: AGGGCATCCGTCCTGCCTGCAGTTCACCCCTGTGAT...GTCCTGCCAACCTCCGTTGGCAACAGCACAGGGAGGTGGCAGCTCTGACTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR GCA 90 bp | GGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGGAAAGGCCCAGCCTGCTTCTTCCGGGCACTaGTCACACCCTTACTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKCHSASSLQLLPGKAQPASSGH*SHPYSW Trigger: CCAAGAGTAAGGGTGTGAGCAGTGCCCGGAAGAAGC...AGGCTGGGCCTTTCCTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 |
||
| 3UTR CAA 72 bp | AGAGCTGCCACCTCCCTGTGCTGTTGCCAACGGAGGTaGGCAGGACTACAGAGTGAAAGAGGAGAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RAATSLCCCQRR*AGLQSERGERG Trigger: GCCCCTCTCTCCTCTTTCACTCTGTAGTCCTGCCAACCTCCGTTGGCAACAGCACAGGGAGGTGGCAGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR GCA 90 bp | CACAGGGAGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCAGAGGTTGCAGCACTTaGATTCGATGCACTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HREDRFEAARPFVGQGRARGCST*IRCTAS Trigger: GCTGGCAGTGCATCGAATGCAAGTGCTGCAACCTCT...GGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGGTCCTGGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGGAAACCTGGGATCCTCAGGTaGGTGGGCTCGGCGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRSWQVPLSQLTPAASRKPGILR*VGSALF Trigger: AAAAAGCGCCGAGCCCACCCACCTGAGGATCCCAGG...TTTCCTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCCAGGACCTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTGTTGCCAACGGAGGTTGGCAGGACTACAGAGTGAAAGAGGAGAGAGGATCACAGGGGTGAACTaGAGGCAGGACGGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCCCQRRLAGLQSERGERITGVN*RQDGCP Trigger: AGGGCATCCGTCCTGCCTGCAGTTCACCCCTGTGAT...CCTCTCTCCTCTTTCACTCTGTAGTCCTGCCAACCTCCGTTGGCAACAGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR GCA 90 bp | GGGCAGAGCCAGGAGGTGCCCGAGAACATTCTAGCTCAAGCACAGAACCCCATGAGAGGTTGCAGCACTTaGATTCGATGCACTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQSQEVPENILAQAQNPMRGCST*IRCTAS Trigger: GCTGGCAGTGCATCGAATGCAAGTGCTGCAACCTCT...CATGGGGTTCTGTGCTTGAGCTAGAATGTTCTCGGGCACCTCCTGGCTCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR GCA 90 bp | TGTAGCATGACAGAGGACAGGGGACTGCTTTGGCAGGAGGCAAAGGGAAGCAGAGCTTCTTCCGGGCACTaGTCACACCCTTACTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSMTEDRGLLWQEAKGSRASSGH*SHPYSW Trigger: CCAAGAGTAAGGGTGTGAGCAGTGCCCGGAAGAAGC...TCTGCTTCCCTTTGCCTCCTGCCAAAGCAGTCCCCTGTCCTCTGTCATGCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCTGGGTAGCCAGAGCGCACCTCCTGGGATCCTCAGGTaGGTGGGCTCGGCGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QKMGSSEDRKCLGSQSAPPGILR*VGSALF Trigger: AAAAAGCGCCGAGCCCACCCACCTGAGGATCCCAGG...AGGTGCGCTCTGGCTACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR TCA 90 bp | AAGCACAGGGAGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGACAGACATGGAAGGAGTaGGACAGTACATGTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KHREDRFEAARPFVGQGRQTWKE*DSTCGS Trigger: GCTACCACATGTACTGTCTCACTCCTTCCATGTCTG...TCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR CCA 90 bp | GCTAGCGTGCAAGGAAAGGGGACCATCCTGTGTCCTGGGAGCCAGGATACACAGTTTTCCGCCAGCGTCTaGCAGGATAGGAGTATAACT | + |
|
Preference number: 4 (lower is better) Translates to: ASVQGKGTILCPGSQDTQFSASV*QDRSIT Trigger: AGTTATACTCCTATCCTGCCAGACGCTGGCGGAAAA...CTGTGTATCCTGGCTCCCAGGACACAGGATGGTCCCCTTTCCTTGCACGCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGGAGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCATCAGGTCCTTTCTTaGATTTCTGCTCCTCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: STGRTGLKLLVPLWDRAEHQVLS*ISAPQT Trigger: GGTCTGAGGAGCAGAAATCCAAGAAAGGACCTGATG...CTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR CCA 90 bp | AGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCAGGAGGTCATCAGGTCCTTTCTTaGATTTCTGCTCCTCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: RTGLKLLVPLWDRAEPGGHQVLS*ISAPQT Trigger: GGTCTGAGGAGCAGAAATCCAAGAAAGGACCTGATG...ACCTCCTGGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR GCA 90 bp | TATGAAAAGGTCCTGGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGCCTTTCTTGGATTTCTaGTCCTCAGACCTCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YEKVLASATQPAHSSCFQPFLDF*SSDLWD Trigger: GTCCCAGAGGTCTGAGGAGCAGAAATCCAAGAAAGG...CTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCCAGGACCTTTTCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR CCA 90 bp | GCTAGCGTGCAAGGAAAGGGGACCATCCTGTGTCCTGGGAGCCAGGATACACAGGTCTGGTTTAATCGATaGGAAAGAAAGCCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ASVQGKGTILCPGSQDTQVWFNR*ERKPGI Trigger: GATCCCAGGCTTTCTTTCCCATCGATTAAACCAGAC...CTGTGTATCCTGGCTCCCAGGACACAGGATGGTCCCCTTTCCTTGCACGCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR CCA 90 bp | AGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCAGGAGGTGTCTGGTTTAATCGATaGGAAAGAAAGCCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RTGLKLLVPLWDRAEPGGVWFNR*ERKPGI Trigger: GATCCCAGGCTTTCTTTCCCATCGATTAAACCAGAC...ACCTCCTGGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAGTCAGAGCTGCCACCTCCCTGTGCTGTTGCCAACGGAGGTTGGCAGGACTCTTTCTTCAGAGTCTaGTCAGTGTCTGGTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: RQSELPPPCAVANGGWQDSFFRV*SVSGLI Trigger: GATTAAACCAGACACTGACCAGACTCTGAAGAAAGA...GTCCTGCCAACCTCCGTTGGCAACAGCACAGGGAGGTGGCAGCTCTGACTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR GCA 90 bp | ACTAAGGATGGGGGCAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCTGGGTAATCACAGGGGTGAACTaGAGGCAGGACGGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKDGGRRWEVLRIGNVWVITGVN*RQDGCP Trigger: AGGGCATCCGTCCTGCCTGCAGTTCACCCCTGTGAT...TACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTGCCCCCATCCTTAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTGTTGCCAACGGAGGTTGGCAGGACTACAGAGTGAAAGAGGAGAGAGGTTTTCCGCCAGCGTCTaGCAGGATAGGAGTATAACT | + |
|
Preference number: 4 (lower is better) Translates to: LCCCQRRLAGLQSERGERFSASV*QDRSIT Trigger: AGTTATACTCCTATCCTGCCAGACGCTGGCGGAAAA...CCTCTCTCCTCTTTCACTCTGTAGTCCTGCCAACCTCCGTTGGCAACAGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
||
| CDS-3UTR CCA 90 bp | TATGAAAAGGTCCTGGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGTTTTCCGCCAGCGTCTaGCAGGATAGGAGTATAACT | + |
|
Preference number: 4 (lower is better) Translates to: YEKVLASATQPAHSSCFQFSASV*QDRSIT Trigger: AGTTATACTCCTATCCTGCCAGACGCTGGCGGAAAA...CTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCCAGGACCTTTTCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR TCA 90 bp | CAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCTGGGTAGCCAGAGCGCACCTCAGACATGGAAGGAGTaGGACAGTACATGTGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: QKMGSSEDRKCLGSQSAPQTWKE*DSTCGS Trigger: GCTACCACATGTACTGTCTCACTCCTTCCATGTCTG...AGGTGCGCTCTGGCTACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR GCA 90 bp | GTGGACAATTCTGGCTTTGCAACTCTGCTTTGGCTTAGCAATCCGACAGGCAATGCTTCTTCCGGGCACTaGTCACACCCTTACTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VDNSGFATLLWLSNPTGNASSGH*SHPYSW Trigger: CCAAGAGTAAGGGTGTGAGCAGTGCCCGGAAGAAGC...ATTGCCTGTCGGATTGCTAAGCCAAAGCAGAGTTGCAAAGCCAGAATTGTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
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| CDS-3UTR CCA 90 bp | AAAAGGTCCTGGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGGAAAGTCTGGTTTAATCGATaGGAAAGAAAGCCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KRSWQVPLSQLTPAASRKVWFNR*ERKPGI Trigger: GATCCCAGGCTTTCTTTCCCATCGATTAAACCAGAC...TTTCCTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCCAGGACCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CCA 90 bp | AGGAGAGCAACGGCCTTAGATGCAGGGGAGCTGGGTGGCACATCAGGAGGAGTTTCTTTCTTCAGAGTCTaGTCAGTGTCTGGTTTAATC | + |
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Preference number: 4 (lower is better) Translates to: RRATALDAGELGGTSGGVSFFRV*SVSGLI Trigger: GATTAAACCAGACACTGACCAGACTCTGAAGAAAGA...AACTCCTCCTGATGTGCCACCCAGCTCCCCTGCATCTAAGGCCGTTGCTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025746.14 |
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| CDS-3UTR CCA 90 bp | AGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCAGGAGGTTCTTTCTTCAGAGTCTaGTCAGTGTCTGGTTTAATC | + |
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Preference number: 4 (lower is better) Translates to: RTGLKLLVPLWDRAEPGGSFFRV*SVSGLI Trigger: GATTAAACCAGACACTGACCAGACTCTGAAGAAAGA...ACCTCCTGGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CCA 90 bp | CAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCTGGGTAGCCAGAGCGCACCTCTTCCCCCGACGCTTTaGCGTATCTTCTTCATAGTC | + |
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Preference number: 4 (lower is better) Translates to: QKMGSSEDRKCLGSQSAPLPPTL*RIFFIV Trigger: GACTATGAAGAAGATACGCCAAAGCGTCGGGGGAAG...AGGTGCGCTCTGGCTACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CCA 90 bp | CAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCTGGGTAGCCAGAGCGCACCTTTTCCACAAACTCTCTaGGGCGCTTTCGAGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: QKMGSSEDRKCLGSQSAPFPQTL*GAFEVC Trigger: GCATACCTCGAAAGCGCCCCAGAGAGTTTGTGGAAA...AGGTGCGCTCTGGCTACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118623.2 |
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| CDS-3UTR TCA 90 bp | GCTAGCGTGCAAGGAAAGGGGACCATCCTGTGTCCTGGGAGCCAGGATACACAGAGGTATGCTTTTGTTTaGAACTATTGTCACAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASVQGKGTILCPGSQDTQRYAFV*NYCHRH Trigger: ATGCCTGTGACAATAGTTTCAAACAAAAGCATACCT...CTGTGTATCCTGGCTCCCAGGACACAGGATGGTCCCCTTTCCTTGCACGCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118623.2 |
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| CDS-3UTR GCA 90 bp | CTGTGCTGTTGCCAACGGAGGTTGGCAGGACTACAGAGTGAAAGAGGAGAGAGGGGCGCTTTCGAGGTATaGTTTTGTTTGAAACTATTG | + |
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Preference number: 4 (lower is better) Translates to: LCCCQRRLAGLQSERGERGAFEV*FCLKLL Trigger: CAATAGTTTCAAACAAAAGCATACCTCGAAAGCGCC...CCTCTCTCCTCTTTCACTCTGTAGTCCTGCCAACCTCCGTTGGCAACAGCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118623.2 |
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| CDS-3UTR CCA 90 bp | AAAAGGTCCTGGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGGAAATCTTTCTTCAGAGTCTaGTCAGTGTCTGGTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: KRSWQVPLSQLTPAASRKSFFRV*SVSGLI Trigger: GATTAAACCAGACACTGACCAGACTCTGAAGAAAGA...TTTCCTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCCAGGACCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CCA 90 bp | AAAGGGACTAAGGATGGGGGCAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCCTTCCCCCGACGCTTTaGCGTATCTTCTTCATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KGTKDGGRRWEVLRIGNVLPPTL*RIFFIV Trigger: GACTATGAAGAAGATACGCCAAAGCGTCGGGGGAAG...GACATTTCCTATCCTCAGAACTTCCCATCTTCTGCCCCCATCCTTAGTCCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CCA 90 bp | ACTAAGGATGGGGGCAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCTGGGTATTTTCCGCCAGCGTCTaGCAGGATAGGAGTATAACT | + |
|
Preference number: 4 (lower is better) Translates to: TKDGGRRWEVLRIGNVWVFSASV*QDRSIT Trigger: AGTTATACTCCTATCCTGCCAGACGCTGGCGGAAAA...TACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTGCCCCCATCCTTAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CCA 90 bp | AAAGGGACTAAGGATGGGGGCAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCCATCAGGTCCTTTCTTaGATTTCTGCTCCTCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: KGTKDGGRRWEVLRIGNVHQVLS*ISAPQT Trigger: GGTCTGAGGAGCAGAAATCCAAGAAAGGACCTGATG...GACATTTCCTATCCTCAGAACTTCCCATCTTCTGCCCCCATCCTTAGTCCCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | GGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGGAAAGGCCCAGCCTTTCCGTGCTCGACTGTaGCTAACAGGAAACTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GKCHSASSLQLLPGKAQPFRARL*LTGNSP Trigger: GGGCGAGTTTCCTGTTAGCAACAGTCGAGCACGGAA...AGGCTGGGCCTTTCCTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | GGCCTGCCCACAGCCAAGGGGGAAGCCCACTCTCTAGAGTACTGCAGAGGACTGTTCCGTGCTCGACTGTaGCTAACAGGAAACTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLPTAKGEAHSLEYCRGLFRARL*LTGNSP Trigger: GGGCGAGTTTCCTGTTAGCAACAGTCGAGCACGGAA...CAGTCCTCTGCAGTACTCTAGAGAGTGGGCTTCCCCCTTGGCTGTGGGCAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | GCTAGCGTGCAAGGAAAGGGGACCATCCTGTGTCCTGGGAGCCAGGATACACAGGACGTGCCGCAGAGGTaGCAGCACTTGCATTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: ASVQGKGTILCPGSQDTQDVPQR*QHLHSM Trigger: CATCGAATGCAAGTGCTGCAACCTCTGCGGCACGTC...CTGTGTATCCTGGCTCCCAGGACACAGGATGGTCCCCTTTCCTTGCACGCTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | AGCACAGGGAGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGGACGTGCCGCAGAGGTaGCAGCACTTGCATTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: STGRTGLKLLVPLWDRAEDVPQR*QHLHSM Trigger: CATCGAATGCAAGTGCTGCAACCTCTGCGGCACGTC...CTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | GCTAGCGTGCAAGGAAAGGGGACCATCCTGTGTCCTGGGAGCCAGGATACACAGTTCCGTGCTCGACTGTaGCTAACAGGAAACTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASVQGKGTILCPGSQDTQFRARL*LTGNSP Trigger: GGGCGAGTTTCCTGTTAGCAACAGTCGAGCACGGAA...CTGTGTATCCTGGCTCCCAGGACACAGGATGGTCCCCTTTCCTTGCACGCTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | AAGCACAGGGAGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGACTCACACCCTTACTCTaGGACTTCCCCTTCCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KHREDRFEAARPFVGQGRLTPLL*DFPFPR Trigger: TCGGGGGAAGGGGAAGTCCAAGAGTAAGGGTGTGAG...TCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGTGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 |
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| CDS-3UTR CAA 90 bp | GGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGGAAAGGCCCAGCCTCCATCAGGTCCTTTCTaGGATTTCTGCTCCTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GKCHSASSLQLLPGKAQPPSGPF*DFCSSD Trigger: GTCTGAGGAGCAGAAATCCAAGAAAGGACCTGATGG...AGGCTGGGCCTTTCCTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | CTGTGCTGTTGCCAACGGAGGTTGGCAGGACTACAGAGTGAAAGAGGAGAGAGGCTCACACCCTTACTCTaGGACTTCCCCTTCCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LCCCQRRLAGLQSERGERLTPLL*DFPFPR Trigger: TCGGGGGAAGGGGAAGTCCAAGAGTAAGGGTGTGAG...CCTCTCTCCTCTTTCACTCTGTAGTCCTGCCAACCTCCGTTGGCAACAGCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 |
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| CDS-3UTR CAA 90 bp | GAGAGCAGAGAGAAGTTGGACCCACAGGTCAGCCCTGGAGCAGCACGCTGCTCCGGCTGCCCTGTCTTCTaGTTGATTTTTGAGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ESREKLDPQVSPGAARCSGCPVF*LIFESP Trigger: AGGAGACTCAAAAATCAACAAGAAGACAGGGCAGCC...GGAGCAGCGTGCTGCTCCAGGGCTGACCTGTGGGTCCAACTTCTCTCTGCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | AGCACAGGGAGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCATCAGGTCCTTTCTaGGATTTCTGCTCCTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: STGRTGLKLLVPLWDRAEPSGPF*DFCSSD Trigger: GTCTGAGGAGCAGAAATCCAAGAAAGGACCTGATGG...CTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | GGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGGAAAGGCCCAGCCTTGCCCTGTCTTCTTGTaGATTTTTGAGTCTCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GKCHSASSLQLLPGKAQPCPVFL*IFESPR Trigger: CCTAGGAGACTCAAAAATCAACAAGAAGACAGGGCA...AGGCTGGGCCTTTCCTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | GGCCTGCCCACAGCCAAGGGGGAAGCCCACTCTCTAGAGTACTGCAGAGGACTGTGCCCTGTCTTCTTGTaGATTTTTGAGTCTCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLPTAKGEAHSLEYCRGLCPVFL*IFESPR Trigger: CCTAGGAGACTCAAAAATCAACAAGAAGACAGGGCA...CAGTCCTCTGCAGTACTCTAGAGAGTGGGCTTCCCCCTTGGCTGTGGGCAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | CACAGGGAGGACAGGTTTGAAGCTGCTCGTCCCTTTGTGGGACAGGGCAGAGCCGGCTGCCCTGTCTTCTaGTTGATTTTTGAGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HREDRFEAARPFVGQGRAGCPVF*LIFESP Trigger: AGGAGACTCAAAAATCAACAAGAAGACAGGGCAGCC...GGCTCTGCCCTGTCCCACAAAGGGACGAGCAGCTTCAAACCTGTCCTCCCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | AAAAGGTCCTGGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGGAAAGGTCGGGAGTCTTCTTaGTCCTCTCCTTCCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KRSWQVPLSQLTPAASRKGRESS*SSPSSS Trigger: TGAAGAGGAAGGAGAGGACAAAGAAGACTCCCGACC...TTTCCTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCCAGGACCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | TATGAAAAGGTCCTGGCAAGTGCCACTCAGCCAGCTCACTCCAGCTGCTTCCAGGGTCGGGAGTCTTCTTaGTCCTCTCCTTCCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YEKVLASATQPAHSSCFQGRESS*SSPSSS Trigger: TGAAGAGGAAGGAGAGGACAAAGAAGACTCCCGACC...CTGGAAGCAGCTGGAGTGAGCTGGCTGAGTGGCACTTGCCAGGACCTTTTCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | CAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCTGGGTAGCCAGAGCGCACCTGGTCGGGAGTCTTCTTaGTCCTCTCCTTCCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QKMGSSEDRKCLGSQSAPGRESS*SSPSSS Trigger: TGAAGAGGAAGGAGAGGACAAAGAAGACTCCCGACC...AGGTGCGCTCTGGCTACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | TGGAGAGCAGAGAGAAGTTGGACCCACAGGTCAGCCCTGGAGCAGCACGCTGCTGAGGTATGCTTTTGTTaGAAACTATTGTCACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WRAERSWTHRSALEQHAAEVCFC*KLLSQA Trigger: TGCCTGTGACAATAGTTTCAAACAAAAGCATACCTC...AGCAGCGTGCTGCTCCAGGGCTGACCTGTGGGTCCAACTTCTCTCTGCTCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118623.2 |
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| CDS-3UTR CAA 90 bp | GTGGACAATTCTGGCTTTGCAACTCTGCTTTGGCTTAGCAATCCGACAGGCAATTTCCGTGCTCGACTGTaGCTAACAGGAAACTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VDNSGFATLLWLSNPTGNFRARL*LTGNSP Trigger: GGGCGAGTTTCCTGTTAGCAACAGTCGAGCACGGAA...ATTGCCTGTCGGATTGCTAAGCCAAAGCAGAGTTGCAAAGCCAGAATTGTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
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| CDS-3UTR CAA 90 bp | CAAGCTTCTGGGTTCACTTTAACCAGGAGACACTGCAGTGCCATAGATCTGCCGCCATCAGGTCCTTTCTaGGATTTCTGCTCCTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QASGFTLTRRHCSAIDLPPSGPF*DFCSSD Trigger: GTCTGAGGAGCAGAAATCCAAGAAAGGACCTGATGG...CGGCAGATCTATGGCACTGCAGTGTCTCCTGGTTAAAGTGAACCCAGAAGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
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| CDS-3UTR CAA 90 bp | GACAATTCTGGCTTTGCAACTCTGCTTTGGCTTAGCAATCCGACAGGCAATGAAGACGTGCCGCAGAGGTaGCAGCACTTGCATTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: DNSGFATLLWLSNPTGNEDVPQR*QHLHSM Trigger: CATCGAATGCAAGTGCTGCAACCTCTGCGGCACGTC...TTCATTGCCTGTCGGATTGCTAAGCCAAAGCAGAGTTGCAAAGCCAGAATTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
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| CDS-3UTR CAA 90 bp | AAAGGGACTAAGGATGGGGGCAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCCCTTCCCCCGACGCTTaGGCGTATCTTCTTCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: KGTKDGGRRWEVLRIGNVPSPDA*AYLLHS Trigger: ACTATGAAGAAGATACGCCAAAGCGTCGGGGGAAGG...GACATTTCCTATCCTCAGAACTTCCCATCTTCTGCCCCCATCCTTAGTCCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | GAGTTTAAAGCACAAACAAGCTTCTGGGTTCACTTTAACCAGGAGACACTGCAGCTCACACCCTTACTCTaGGACTTCCCCTTCCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: EFKAQTSFWVHFNQETLQLTPLL*DFPFPR Trigger: TCGGGGGAAGGGGAAGTCCAAGAGTAAGGGTGTGAG...CTGCAGTGTCTCCTGGTTAAAGTGAACCCAGAAGCTTGTTTGTGCTTTAAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136983.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCTGGGTAGCCAGAGCGCACCTTGCCCTGTCTTCTTGTaGATTTTTGAGTCTCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QKMGSSEDRKCLGSQSAPCPVFL*IFESPR Trigger: CCTAGGAGACTCAAAAATCAACAAGAAGACAGGGCA...AGGTGCGCTCTGGCTACCCAGACATTTCCTATCCTCAGAACTTCCCATCTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS-3UTR CAA 90 bp | AAAGGGACTAAGGATGGGGGCAGAAGATGGGAAGTTCTGAGGATAGGAAATGTCGGCTGCCCTGTCTTCTaGTTGATTTTTGAGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KGTKDGGRRWEVLRIGNVGCPVF*LIFESP Trigger: AGGAGACTCAAAAATCAACAAGAAGACAGGGCAGCC...GACATTTCCTATCCTCAGAACTTCCCATCTTCTGCCCCCATCCTTAGTCCCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS CCA 72 bp | GATAAGCCCCTCTTTCTTCAGAGTCTGGTCAGTGTCTaGTTTAATCGATGGGAAAGAAAGCCTGGGATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DKPLFLQSLVSV*FNRWERKPGIL Trigger: GAGGATCCCAGGCTTTCTTTCCCATCGATTAAACCAGACACTGACCAGACTCTGAAGAAAGAGGGGCTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025746.14 ENSMUST00000118623.2 ENSMUST00000136983.8 ENSMUST00000236970.2 |
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| CDS CAA 72 bp | TCCACAAACTCTCTGGGGCGCTTTCGAGGTATGCTTTaGTTTGAAACTATTGTCACAGGCATAGGGCTTATC | + |
|
Preference number: 6 (lower is better) Translates to: STNSLGRFRGML*FETIVTGIGLI Trigger: GATAAGCCCTATGCCTGTGACAATAGTTTCAAACAAAAGCATACCTCGAAAGCGCCCCAGAGAGTTTGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118623.2 |
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