Pregenerated sensors for DPF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030584Ensembl transcript IDs: ENSMUST00000049977.13, ENSMUST00000065181.12, ENSMUST00000108230.8, ENSMUST00000108231.8, ENSMUST00000137848.2, ENSMUST00000142958.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTaGGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: HPLPLYARPKAGVWL*GEQKPGAHLSRDEE Trigger: CTCTTCATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAGGCAGGCACCACGCGGGCGCAGGGCGGGGCTCTCAAGGAGGAGGAGGAGCGGGGGTATGGCTTTaGGGAGAGCAGAAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LAGRHHAGAGRGSQGGGGAGVWL*GEQKPG Trigger: ACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGC...TCCTCCTCCTCCTTGAGAGCCCCGCCCTGCGCCCGCGTGGTGCCTGCCTGCCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGGCAGGCACCACGCGGGCGCAGGGCGGGGCTCTCAAGGAGGAGGAGGAAATGCAGTATCCACGGTaGGTACTGAGGAAGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: WQAGTTRAQGGALKEEEEMQYPR*VLRKGW Trigger: CCACCCCTTCCTCAGTACCCACCGTGGATACTGCAT...TTCCTCCTCCTCCTTGAGAGCCCCGCCCTGCGCCCGCGTGGTGCCTGCCTGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCGTGCTGCTGGCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGCAGGAGGGACCCTGTTaGACCCAGCCACCCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: LSVLLASIHYPSMPAQRRQEGPC*TQPPTG Trigger: CCCTGTGGGTGGCTGGGTCCAACAGGGTCCCTCCTG...CCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGCCAGCAGCACGGAAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGCAGGAGGGACCCTGTTaGACCCAGCCACCCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: LASTTPLCPPKGGGMALRQEGPC*TQPPTG Trigger: CCCTGTGGGTGGCTGGGTCCAACAGGGTCCCTCCTG...CCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGAAGAGGGGGCAGGAGGGACCCTGTTaGACCCAGCCACCCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: GFEESRSLVPICQGMKRGQEGPC*TQPPTG Trigger: CCCTGTGGGTGGCTGGGTCCAACAGGGTCCCTCCTG...CCCCCTCTTCATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCGTGCTGCTGGCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGAGGAGAGCAGAAGCCTaGTGCCCATTTGTCAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LSVLLASIHYPSMPAQRRRRAEA*CPFVKG Trigger: TCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCT...CCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGCCAGCAGCACGGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGCGCCATTCAGGAAACTGGTAAAGTCAGGTCCCCAGCAGACACTCAACAGTAGGAGAGCAGAAGCCTaGTGCCCATTTGTCAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: EAPFRKLVKSGPQQTLNSRRAEA*CPFVKG Trigger: TCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCT...ACTGTTGAGTGTCTGCTGGGGACCTGACTTTACCAGTTTCCTGAATGGCGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| 3UTR TCA 72 bp | CCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTaGGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: PLYARPKAGVWL*GEQKPGAHLSR Trigger: CCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| 3UTR-3UTR CAA 90 bp | CTTTCCGTGCTGCTGGCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGAAGCCTGGTGCCCATTaGTCAAGGGATGAAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: LSVLLASIHYPSMPAQRRKPGAH*SRDEEG Trigger: CCCCTCTTCATCCCTTGACAAATGGGCACCAGGCTT...CCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGCCAGCAGCACGGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| 3UTR GCA 72 bp | TTTCCGTGCTGCTGGCTAGCATCCACTACCCCTCTATaGCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: FPCCWLASTTPL*PPKGGGMALRR Trigger: TCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGCCAGCAGCACGGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAAGCCTGGTGCCCATTaGTCAAGGGATGAAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: IHYPSMPAQRRGYGFEESKPGAH*SRDEEG Trigger: CCCCTCTTCATCCCTTGACAAATGGGCACCAGGCTT...GCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| 3UTR-3UTR CAA 90 bp | GTACTGAGGAAGGGGTGGTACCCACCTCAGATGGGAGTTGAGACCATTGCAACTGGCGGGGGTATGGCTTaGAGGAGAGCAGAAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: VLRKGWYPPQMGVETIATGGGMA*RRAEAW Trigger: CCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCC...AGTTGCAATGGTCTCAACTCCCATCTGAGGTGGGTACCACCCCTTCCTCAGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| 3UTR TCA 72 bp | ACTGAGGAAGGGGTGGTACCCACCTCAGATGGGAGTTaGGACCATTGCAACTCCAGAAATGAGGTGGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: TEEGVVPTSDGS*DHCNSRNEVGR Trigger: CCTCCCCACCTCATTTCTGGAGTTGCAATGGTCTCAACTCCCATCTGAGGTGGGTACCACCCCTTCCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| 3UTR CCA 72 bp | CACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTaGTACCCACCTCAGATGGGAGTTGAGACCATTGCA | + |
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Preference number: 3 (lower is better) Translates to: HMQYPRWVLRKG*YPPQMGVETIA Trigger: TGCAATGGTCTCAACTCCCATCTGAGGTGGGTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| 3UTR CCA 72 bp | ATGGGAGTTGAGACCATTGCAACTCCAGAAATGAGGTaGGGAGGCGCCATTCAGGAAACTGGTAAAGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: MGVETIATPEMR*GGAIQETGKVR Trigger: CCTGACTTTACCAGTTTCCTGAATGGCGCCTCCCCACCTCATTTCTGGAGTTGCAATGGTCTCAACTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS-3UTR TCA 90 bp | CTGGCAGGCAGGCACCACGCGGGCGCAGGGCGGGGCTCTCAAGGAGGAGGAGGAAGTCCGCACAGGAGATaGGGTCCTCGGGACACCCAG | + |
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Preference number: 4 (lower is better) Translates to: LAGRHHAGAGRGSQGGGGSPHRR*GPRDTQ Trigger: CTGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACT...TCCTCCTCCTCCTTGAGAGCCCCGCCCTGCGCCCGCGTGGTGCCTGCCTGCCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | CTGGCAGGCAGGCACCACGCGGGCGCAGGGCGGGGCTCTCAAGGAGGAGGAGGAGCGTGGCGTTCAGTGTaGTCCTCCCCCTCCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LAGRHHAGAGRGSQGGGGAWRSV*SSPSSS Trigger: TGAGGAGGAGGGGGAGGAGCACACTGAACGCCACGC...TCCTCCTCCTCCTTGAGAGCCCCGCCCTGCGCCCGCGTGGTGCCTGCCTGCCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS-3UTR TCA 90 bp | TCCCTTCCACTGGGGACACCGGGTGGGGAGCGCCAGGAGCTCCAAGAGGCAGGAAGTCCGCACAGGAGATaGGGTCCTCGGGACACCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLPLGTPGGERQELQEAGSPHRR*GPRDTQ Trigger: CTGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACT...TCCTGCCTCTTGGAGCTCCTGGCGCTCCCCACCCGGTGTCCCCAGTGGAAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | TCCCTTCCACTGGGGACACCGGGTGGGGAGCGCCAGGAGCTCCAAGAGGCAGGATGGGCCACTCCGGTCTaGGAGTCGAGGAAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPLGTPGGERQELQEAGWATPV*ESRKGR Trigger: CCTGCCTTTCCTCGACTCGCAGACCGGAGTGGCCCA...TCCTGCCTCTTGGAGCTCCTGGCGCTCCCCACCCGGTGTCCCCAGTGGAAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR TCA 90 bp | CTGGCAGGCAGGCACCACGCGGGCGCAGGGCGGGGCTCTCAAGGAGGAGGAGGAAGTAGCCATTGGGGATaGCAGTGCCATCTGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LAGRHHAGAGRGSQGGGGSSHWG*QCHLVL Trigger: AAGCACCAGATGGCACTGTCATCCCCAATGGCTACT...TCCTCCTCCTCCTTGAGAGCCCCGCCCTGCGCCCGCGTGGTGCCTGCCTGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS-3UTR CCA 90 bp | CTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCGGGGGCTCCGCCATaGGAGGGCTCAGGCAGTACA | + |
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Preference number: 4 (lower is better) Translates to: LCPPKGGGMALRRAEAWCPGAPP*EGSGST Trigger: TGTACTGCCTGAGCCCTCCCATGGCGGAGCCCCCGG...GCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | TGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCAGGCGCGCGTTGTAGCTaGGACAGTGCTCGATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: CPPKGGGMALRRAEAWCPGARCS*DSARWP Trigger: AGGCCATCGAGCACTGTCGCAGCTACAACGCGCGCC...TGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | TGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATCGGTCCTCCAGGGATaGGGTGTCCTGGCGTTTGCG | + |
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Preference number: 4 (lower is better) Translates to: CPPKGGGMALRRAEAWCPSVLQG*GVLAFA Trigger: CGCAAACGCCAGGACACCGCATCCCTGGAGGACCGA...TGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR TCA 90 bp | CTTTCCGTGCTGCTGGCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGCCTCGCCAAGGGACTTaGGCGGGTTCTGAATGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LSVLLASIHYPSMPAQRRPRQGT*AGSEWR Trigger: CCGCCATTCAGAACCCGCTCAAGTCCCTTGGCGAGG...CCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGCCAGCAGCACGGAAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS-3UTR TCA 90 bp | CTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCTCGCCAAGGGACTTaGGCGGGTTCTGAATGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LCPPKGGGMALRRAEAWCPRQGT*AGSEWR Trigger: CCGCCATTCAGAACCCGCTCAAGTCCCTTGGCGAGG...GCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | TGGCAGGCAGGCACCACGCGGGCGCAGGGCGGGGCTCTCAAGGAGGAGGAGGAATCTACCTCGAGATCATaGGGAAACTCCAGCAACTGC | + |
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Preference number: 4 (lower is better) Translates to: WQAGTTRAQGGALKEEEESTSRS*GNSSNC Trigger: GCAGTTGCTGGAGTTTCCGCATGATCTCGAGGTAGA...TTCCTCCTCCTCCTTGAGAGCCCCGCCCTGCGCCCGCGTGGTGCCTGCCTGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | CCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTCGGTCCTCCAGGGATaGGGTGTCCTGGCGTTTGCG | + |
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Preference number: 4 (lower is better) Translates to: PAQRRGYGFEESRSLVPISVLQG*GVLAFA Trigger: CGCAAACGCCAGGACACCGCATCCCTGGAGGACCGA...AATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR TCA 90 bp | GCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGAGTCCGCACAGGAGATaGGGTCCTCGGGACACCCAG | + |
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Preference number: 4 (lower is better) Translates to: ASIHYPSMPAQRRGYGFESPHRR*GPRDTQ Trigger: CTGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACT...CTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | GAGCGCCAGGAGCTCCAAGAGGCAGGAGATAGCACCACCCAAAGATCCTGGGGAGGCGCGCGTTGTAGCTaGGACAGTGCTCGATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ERQELQEAGDSTTQRSWGGARCS*DSARWP Trigger: AGGCCATCGAGCACTGTCGCAGCTACAACGCGCGCC...TCCCCAGGATCTTTGGGTGGTGCTATCTCCTGCCTCTTGGAGCTCCTGGCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | ATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCTGGGCCACTCCGGTCTaGGAGTCGAGGAAAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: IHYPSMPAQRRGYGFEESWATPV*ESRKGR Trigger: CCTGCCTTTCCTCGACTCGCAGACCGGAGTGGCCCA...GCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | GAGCGCCAGGAGCTCCAAGAGGCAGGAGATAGCACCACCCAAAGATCCTGGGGATGGGCCACTCCGGTCTaGGAGTCGAGGAAAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ERQELQEAGDSTTQRSWGWATPV*ESRKGR Trigger: CCTGCCTTTCCTCGACTCGCAGACCGGAGTGGCCCA...TCCCCAGGATCTTTGGGTGGTGCTATCTCCTGCCTCTTGGAGCTCCTGGCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | GCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGCGTGGCGTTCAGTGTaGTCCTCCCCCTCCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: ASIHYPSMPAQRRGYGFEAWRSV*SSPSSS Trigger: TGAGGAGGAGGGGGAGGAGCACACTGAACGCCACGC...CTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | CTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGGCGTGGCGTTCAGTGTaGTCCTCCCCCTCCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LASTTPLCPPKGGGMALRAWRSV*SSPSSS Trigger: TGAGGAGGAGGGGGAGGAGCACACTGAACGCCACGC...CCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | TCCCTTCCACTGGGGACACCGGGTGGGGAGCGCCAGGAGCTCCAAGAGGCAGGAAGGACTTGCATTCAATaGACTGCCAGCGGTAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SLPLGTPGGERQELQEAGRTCIQ*TASGRS Trigger: GGACCTACCGCTGGCAGTGCATTGAATGCAAGTCCT...TCCTGCCTCTTGGAGCTCCTGGCGCTCCCCACCCGGTGTCCCCAGTGGAAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CCA 90 bp | CGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGCAGAGCCTCGAGGACTaGCCCTTCCGGGAGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: RGYGFEESRSLVPICQGMQSLED*PFREAT Trigger: GGTGGCCTCCCGGAAGGGCCAGTCCTCGAGGCTCTG...CATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CCA 90 bp | CACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTGGTACCCACCTCAGATGCCGGGGGCTCCGCCATaGGAGGGCTCAGGCAGTACA | + |
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Preference number: 4 (lower is better) Translates to: HMQYPRWVLRKGWYPPQMPGAPP*EGSGST Trigger: TGTACTGCCTGAGCCCTCCCATGGCGGAGCCCCCGG...CATCTGAGGTGGGTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS-3UTR CCA 90 bp | CGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGCCGGGGGCTCCGCCATaGGAGGGCTCAGGCAGTACA | + |
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Preference number: 4 (lower is better) Translates to: RGYGFEESRSLVPICQGMPGAPP*EGSGST Trigger: TGTACTGCCTGAGCCCTCCCATGGCGGAGCCCCCGG...CATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | CCAGCAGACACTCAACAGTGCCTCTCCACCCAGCCAGGCTTTATAGGACTCTTTAAGGCAGGCGCAGGCTaGGCTCGGCACACAGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: PADTQQCLSTQPGFIGLFKAGAG*ARHTGA Trigger: CGCGCCTGTGTGCCGAGCGCAGCCTGCGCCTGCCTT...AAAGAGTCCTATAAAGCCTGGCTGGGTGGAGAGGCACTGTTGAGTGTCTGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | CCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTCGGTGTCCTGGCGTTTaGGGAGACCTCCAATGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PAQRRGYGFEESRSLVPIRCPGV*GDLQCH Trigger: ATGGCATTGGAGGTCTCCGCAAACGCCAGGACACCG...AATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | TGCTGGCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTCGTCATTCTCCGAGGTaGCACACAGGCTGCAGGACT | + |
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Preference number: 4 (lower is better) Translates to: CWLASTTPLCPPKGGGMARHSPR*HTGCRT Trigger: AGTCCTGCAGCCTGTGTGGCACCTCGGAGAATGACG...AGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGCCAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | TGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCAGCCTTTTCCTTCAAGTaGCGGAGACAGAGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPPKGGGMALRRAEAWCPAFSFK*RRQRWQ Trigger: CTGCCACCTCTGTCTCCGGCACTTGAAGGAAAAGGC...TGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTACTGAGGAAGGGGTGGTACCCACCTCAGATGGGAGTTGAGACCATTGCACCGGGGGCTCCGCCATaGGAGGGCTCAGGCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: WVLRKGWYPPQMGVETIAPGAPP*EGSGST Trigger: TGTACTGCCTGAGCCCTCCCATGGCGGAGCCCCCGG...TGCAATGGTCTCAACTCCCATCTGAGGTGGGTACCACCCCTTCCTCAGTACCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | GACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGAATGGGCCACTCCGGTCTaGGAGTCGAGGAAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DPVGPSHPQGNIPLAEGEWATPV*ESRKGR Trigger: CCTGCCTTTCCTCGACTCGCAGACCGGAGTGGCCCA...TTCTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | GGGACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGCGGTGTCCTGGCGTTTaGGGAGACCTCCAATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTLLDPATHRVTFHLQRERCPGV*GDLQCH Trigger: ATGGCATTGGAGGTCTCCGCAAACGCCAGGACACCG...CTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | ATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCCGGTGTCCTGGCGTTTaGGGAGACCTCCAATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IHYPSMPAQRRGYGFEESRCPGV*GDLQCH Trigger: ATGGCATTGGAGGTCTCCGCAAACGCCAGGACACCG...GCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | CGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGTCGGTCCTCCAGGGATaGGGTGTCCTGGCGTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RGYGFEESRSLVPICQGMSVLQG*GVLAFA Trigger: CGCAAACGCCAGGACACCGCATCCCTGGAGGACCGA...CATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | GACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGAATCGGTCCTCCAGGGATaGGGTGTCCTGGCGTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: DPVGPSHPQGNIPLAEGESVLQG*GVLAFA Trigger: CGCAAACGCCAGGACACCGCATCCCTGGAGGACCGA...TTCTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | GCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGCGTCATTCTCCGAGGTaGCACACAGGCTGCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ASIHYPSMPAQRRGYGFERHSPR*HTGCRT Trigger: AGTCCTGCAGCCTGTGTGGCACCTCGGAGAATGACG...CTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCCGTGCTGCTGGCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGCCTTTTCCTTCAAGTaGCGGAGACAGAGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSVLLASIHYPSMPAQRRAFSFK*RRQRWQ Trigger: CTGCCACCTCTGTCTCCGGCACTTGAAGGAAAAGGC...CCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGCCAGCAGCACGGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGTGCGACAGTGCTCGATaGCCTCCCGGTAGAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASIHYPSMPAQRRGYGFECDSAR*PPGRSP Trigger: AGGACTTCTACCGGGAGGCCATCGAGCACTGTCGCA...CTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | ATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCTGCGACAGTGCTCGATaGCCTCCCGGTAGAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IHYPSMPAQRRGYGFEESCDSAR*PPGRSP Trigger: AGGACTTCTACCGGGAGGCCATCGAGCACTGTCGCA...GCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGTGCGACAGTGCTCGATaGCCTCCCGGTAGAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LASTTPLCPPKGGGMALRCDSAR*PPGRSP Trigger: AGGACTTCTACCGGGAGGCCATCGAGCACTGTCGCA...CCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTGGTTGTTTTTCCGGTaGAAAGGCAGGGCGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: CWLASTTPLCPPKGGGMAWLFFR*KGRAWR Trigger: ACGCCACGCCCTGCCTTTCCACCGGAAAAACAACCA...AGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGCCAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108231.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCAGTTTCTGACAGTCCATaGTGGTCTCCTCCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CPPKGGGMALRRAEAWCPVSDSP*WSPPPS Trigger: TGAAGGAGGAGGAGACCATCATGGACTGTCAGAAAC...TGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR TCA 90 bp | CTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCGGGTGTAATGGTAGCTaGGTCCTGGCCGGTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LCPPKGGGMALRRAEAWCGCNGS*VLAGSY Trigger: ATAAGAACCGGCCAGGACTCAGCTACCATTACACCC...GCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108231.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCGTGCTGCTGGCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGAGTAGCCATTGGGGATaGCAGTGCCATCTGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSVLLASIHYPSMPAQRRSSHWG*QCHLVL Trigger: AAGCACCAGATGGCACTGTCATCCCCAATGGCTACT...CCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGCCAGCAGCACGGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATGCGGAGACCTCCAATaGCATATGCCTTTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CPPKGGGMALRRAEAWCPCGDLQ*HMPFLL Trigger: CAAGAGGAAAGGCATATGGCATTGGAGGTCTCCGCA...TGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | ATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCGCCTTTTCCTTCAAGTaGCGGAGACAGAGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IHYPSMPAQRRGYGFEESAFSFK*RRQRWQ Trigger: CTGCCACCTCTGTCTCCGGCACTTGAAGGAAAAGGC...GCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR TCA 90 bp | CGGGTGGGGAGCGCCAGGAGCTCCAAGAGGCAGGAGATAGCACCACCCAAAGATGTTTCTGACAGTCCATaGTGGTCTCCTCCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVGSARSSKRQEIAPPKDVSDSP*WSPPPS Trigger: TGAAGGAGGAGGAGACCATCATGGACTGTCAGAAAC...ATCTTTGGGTGGTGCTATCTCCTGCCTCTTGGAGCTCCTGGCGCTCCCCACCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR TCA 90 bp | GTACTGAGGAAGGGGTGGTACCCACCTCAGATGGGAGTTGAGACCATTGCAACTAGTCCGCACAGGAGATaGGGTCCTCGGGACACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLRKGWYPPQMGVETIATSPHRR*GPRDTQ Trigger: CTGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACT...AGTTGCAATGGTCTCAACTCCCATCTGAGGTGGGTACCACCCCTTCCTCAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
||
| CDS-3UTR TCA 90 bp | CTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCGGTCATGTTCACCGTaGACTGTAAACACGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCPPKGGGMALRRAEAWCRSCSP*TVNTRD Trigger: ATCCCTCGTGTTTACAGTTCACGGTGAACATGACCG...GCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCGTGCTGCTGGCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGCGGTCATGTTCACCGTaGACTGTAAACACGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSVLLASIHYPSMPAQRRRSCSP*TVNTRD Trigger: ATCCCTCGTGTTTACAGTTCACGGTGAACATGACCG...CCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGCCAGCAGCACGGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | AAACACACACAACCACGAGAAACAACCACACCCCCTTGCCACCCCCAAATGGCTGGCGCGCGTTGTAGCTaGGACAGTGCTCGATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KHTQPRETTTPPCHPQMAGARCS*DSARWP Trigger: AGGCCATCGAGCACTGTCGCAGCTACAACGCGCGCC...AGCCATTTGGGGGTGGCAAGGGGGTGTGGTTGTTTCTCGTGGTTGTGTGTGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049977.13 |
||
| CDS-3UTR GCA 90 bp | AACCATAGTTCACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTGGTACCCGGCGCGCGTTGTAGCTaGGACAGTGCTCGATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NHSSHAVSTVGTEEGVVPGARCS*DSARWP Trigger: AGGCCATCGAGCACTGTCGCAGCTACAACGCGCGCC...GGGTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTGAACTATGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | CCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTCTACCTCGAGATCATaGGGAAACTCCAGCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PAQRRGYGFEESRSLVPISTSRS*GNSSNC Trigger: GCAGTTGCTGGAGTTTCCGCATGATCTCGAGGTAGA...AATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | GAGCGCCAGGAGCTCCAAGAGGCAGGAGATAGCACCACCCAAAGATCCTGGGGAAGGACTTGCATTCAATaGACTGCCAGCGGTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERQELQEAGDSTTQRSWGRTCIQ*TASGRS Trigger: GGACCTACCGCTGGCAGTGCATTGAATGCAAGTCCT...TCCCCAGGATCTTTGGGTGGTGCTATCTCCTGCCTCTTGGAGCTCCTGGCGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | GACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGAATGCGACAGTGCTCGATaGCCTCCCGGTAGAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPVGPSHPQGNIPLAEGECDSAR*PPGRSP Trigger: AGGACTTCTACCGGGAGGCCATCGAGCACTGTCGCA...TTCTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTGATGACAGTGCCATCTaGTGCTTTCTTGGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CWLASTTPLCPPKGGGMADDSAI*CFLGCV Trigger: CACACAGCCAAGAAAGCACCAGATGGCACTGTCATC...AGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGCCAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR TCA 90 bp | CACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTGGTACCCACCTCAGATGGGTCCTCCAGGATGTTaGGTCTCCGTTTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HMQYPRWVLRKGWYPPQMGPPGC*VSVSSS Trigger: GGAGGAAGAAACGGAGACTCAACATCCTGGAGGACC...CATCTGAGGTGGGTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
||
| CDS-3UTR TCA 90 bp | GACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGAAGGTCCTCCAGGATGTTaGGTCTCCGTTTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPVGPSHPQGNIPLAEGEGPPGC*VSVSSS Trigger: GGAGGAAGAAACGGAGACTCAACATCCTGGAGGACC...TTCTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | GCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGTCTACCTCGAGATCATaGGGAAACTCCAGCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASIHYPSMPAQRRGYGFESTSRS*GNSSNC Trigger: GCAGTTGCTGGAGTTTCCGCATGATCTCGAGGTAGA...CTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCCGTGCTGCTGGCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGACCTCCAATGCCATATaGCTTTCCTCTTGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSVLLASIHYPSMPAQRRTSNAI*LSSCPV Trigger: AACAGGGCAAGAGGAAAGGCATATGGCATTGGAGGT...CCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGCCAGCAGCACGGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | CTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCACCTCCAATGCCATATaGCTTTCCTCTTGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCPPKGGGMALRRAEAWCTSNAI*LSSCPV Trigger: AACAGGGCAAGAGGAAAGGCATATGGCATTGGAGGT...GCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | GCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGTGCGGAGACCTCCAATaGCATATGCCTTTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASIHYPSMPAQRRGYGFECGDLQ*HMPFLL Trigger: CAAGAGGAAAGGCATATGGCATTGGAGGTCTCCGCA...CTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGACAGGCTGCAGGACTTaGATTCAATGCACTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRDPVGPSHPQGNIPLAETGCRT*IQCTAS Trigger: GCTGGCAGTGCATTGAATGCAAGTCCTGCAGCCTGT...CTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTCCCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGCGTCATTCTCCGAGGTaGCACACAGGCTGCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KGGGMALRRAEAWCPFVKRHSPR*HTGCRT Trigger: AGTCCTGCAGCCTGTGTGGCACCTCGGAGAATGACG...CTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | TTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGAACACCTTGCGTCATTCTCCGAGGTaGCACACAGGCTGCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LDPATHRVTFHLQRENTLRHSPR*HTGCRT Trigger: AGTCCTGCAGCCTGTGTGGCACCTCGGAGAATGACG...CAAGGTGTTCTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | GACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGAAGCCTTTTCCTTCAAGTaGCGGAGACAGAGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DPVGPSHPQGNIPLAEGEAFSFK*RRQRWQ Trigger: CTGCCACCTCTGTCTCCGGCACTTGAAGGAAAAGGC...TTCTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGCCCTGTTCTTCCTCCTaGGAATGTCTTCCTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LASTTPLCPPKGGGMALRPCSSS*ECLPPS Trigger: ACTTGGAGGAAGACATTCCCAGGAGGAAGAACAGGG...CCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | GACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGAATGGTTGTTTTTCCGGTaGAAAGGCAGGGCGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: DPVGPSHPQGNIPLAEGEWLFFR*KGRAWR Trigger: ACGCCACGCCCTGCCTTTCCACCGGAAAAACAACCA...TTCTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | CCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTCATCTGGTGCTTTCTTaGCTGTGTGTTTCCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PAQRRGYGFEESRSLVPIHLVLS*LCVSSV Trigger: CACAGAGGAAACACACAGCCAAGAAAGCACCAGATG...AATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTCATCTGGTGCTTTCTTaGCTGTGTGTTTCCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CWLASTTPLCPPKGGGMAHLVLS*LCVSSV Trigger: CACAGAGGAAACACACAGCCAAGAAAGCACCAGATG...AGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGCCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | CTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCATCTGGTGCTTTCTTaGCTGTGTGTTTCCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCPPKGGGMALRRAEAWCHLVLS*LCVSSV Trigger: CACAGAGGAAACACACAGCCAAGAAAGCACCAGATG...GCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGATGACAGTGCCATCTaGTGCTTTCTTGGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASIHYPSMPAQRRGYGFEDDSAI*CFLGCV Trigger: CACACAGCCAAGAAAGCACCAGATGGCACTGTCATC...CTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | GAGCGCCAGGAGCTCCAAGAGGCAGGAGATAGCACCACCCAAAGATCCTGGGGAGATGACAGTGCCATCTaGTGCTTTCTTGGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ERQELQEAGDSTTQRSWGDDSAI*CFLGCV Trigger: CACACAGCCAAGAAAGCACCAGATGGCACTGTCATC...TCCCCAGGATCTTTGGGTGGTGCTATCTCCTGCCTCTTGGAGCTCCTGGCGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGTCCTCCAGGATGTTaGGTCTCCGTTTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGGGMALRRAEAWCPFVKGPPGC*VSVSSS Trigger: GGAGGAAGAAACGGAGACTCAACATCCTGGAGGACC...CTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR TCA 90 bp | CGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGAGTAGCCATTGGGGATaGCAGTGCCATCTGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGYGFEESRSLVPICQGMSSHWG*QCHLVL Trigger: AAGCACCAGATGGCACTGTCATCCCCAATGGCTACT...CATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | AACCATAGTTCACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTGGTACCCCGGTGTCCTGGCGTTTaGGGAGACCTCCAATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NHSSHAVSTVGTEEGVVPRCPGV*GDLQCH Trigger: ATGGCATTGGAGGTCTCCGCAAACGCCAGGACACCG...GGGTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTGAACTATGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | GCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGACAGTGCCATCTGGTaGTTTCTTGGCTGTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASIHYPSMPAQRRGYGFEDSAIW*FLGCVF Trigger: AAACACACAGCCAAGAAAGCACCAGATGGCACTGTC...CTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | CACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTGGTACCCACCTCAGATGAGGACTTGCATTCAATaGACTGCCAGCGGTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HMQYPRWVLRKGWYPPQMRTCIQ*TASGRS Trigger: GGACCTACCGCTGGCAGTGCATTGAATGCAAGTCCT...CATCTGAGGTGGGTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | CGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGAGGACTTGCATTCAATaGACTGCCAGCGGTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGYGFEESRSLVPICQGMRTCIQ*TASGRS Trigger: GGACCTACCGCTGGCAGTGCATTGAATGCAAGTCCT...CATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | GACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGAAACAGGCTGCAGGACTTaGATTCAATGCACTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DPVGPSHPQGNIPLAEGETGCRT*IQCTAS Trigger: GCTGGCAGTGCATTGAATGCAAGTCCTGCAGCCTGT...TTCTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGCCCTGTTCTTCCTCCTaGGAATGTCTTCCTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRDPVGPSHPQGNIPLAEPCSSS*ECLPPS Trigger: ACTTGGAGGAAGACATTCCCAGGAGGAAGAACAGGG...CTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTCCCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CCA 90 bp | GGGACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGCATCTGGTGCTTTCTTaGCTGTGTGTTTCCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTLLDPATHRVTFHLQREHLVLS*LCVSSV Trigger: CACAGAGGAAACACACAGCCAAGAAAGCACCAGATG...CTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
||
| CDS-3UTR TCA 90 bp | CGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGGTTTCTGACAGTCCATaGTGGTCTCCTCCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGYGFEESRSLVPICQGMVSDSP*WSPPPS Trigger: TGAAGGAGGAGGAGACCATCATGGACTGTCAGAAAC...CATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR TCA 90 bp | AAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGGTGTAATGGTAGCTaGGTCCTGGCCGGTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KGGGMALRRAEAWCPFVKGCNGS*VLAGSY Trigger: ATAAGAACCGGCCAGGACTCAGCTACCATTACACCC...CTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108231.8 |
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| CDS-3UTR TCA 90 bp | GGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGAAGAGGGGGCGGTCATGTTCACCGTaGACTGTAAACACGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GFEESRSLVPICQGMKRGRSCSP*TVNTRD Trigger: ATCCCTCGTGTTTACAGTTCACGGTGAACATGACCG...CCCCCTCTTCATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR TCA 90 bp | CACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTGGTACCCACCTCAGATGCGGTCATGTTCACCGTaGACTGTAAACACGAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HMQYPRWVLRKGWYPPQMRSCSP*TVNTRD Trigger: ATCCCTCGTGTTTACAGTTCACGGTGAACATGACCG...CATCTGAGGTGGGTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | GACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGAATCTACCTCGAGATCATaGGGAAACTCCAGCAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: DPVGPSHPQGNIPLAEGESTSRS*GNSSNC Trigger: GCAGTTGCTGGAGTTTCCGCATGATCTCGAGGTAGA...TTCTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | GGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGAAGAGGGGGTGCGGAGACCTCCAATaGCATATGCCTTTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFEESRSLVPICQGMKRGCGDLQ*HMPFLL Trigger: CAAGAGGAAAGGCATATGGCATTGGAGGTCTCCGCA...CCCCCTCTTCATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | AAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGACAGGCTGCAGGACTTaGATTCAATGCACTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KGGGMALRRAEAWCPFVKTGCRT*IQCTAS Trigger: GCTGGCAGTGCATTGAATGCAAGTCCTGCAGCCTGT...CTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CCA 90 bp | GACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGAACCCTGTTCTTCCTCCTaGGAATGTCTTCCTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DPVGPSHPQGNIPLAEGEPCSSS*ECLPPS Trigger: ACTTGGAGGAAGACATTCCCAGGAGGAAGAACAGGG...TTCTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CCA 90 bp | CTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGATGGTAGCTGAGTCCTaGCCGGTTCTTATATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LASTTPLCPPKGGGMALRMVAES*PVLISL Trigger: AAGAGATATAAGAACCGGCCAGGACTCAGCTACCAT...CCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108231.8 |
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| CDS-3UTR CCA 90 bp | CACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTGGTACCCACCTCAGATGGATGACAGTGCCATCTaGTGCTTTCTTGGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HMQYPRWVLRKGWYPPQMDDSAI*CFLGCV Trigger: CACACAGCCAAGAAAGCACCAGATGGCACTGTCATC...CATCTGAGGTGGGTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS-3UTR TCA 90 bp | CCAGCAGACACTCAACAGTGCCTCTCCACCCAGCCAGGCTTTATAGGACTCTTTGGGTGTAATGGTAGCTaGGTCCTGGCCGGTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PADTQQCLSTQPGFIGLFGCNGS*VLAGSY Trigger: ATAAGAACCGGCCAGGACTCAGCTACCATTACACCC...AAAGAGTCCTATAAAGCCTGGCTGGGTGGAGAGGCACTGTTGAGTGTCTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | CGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGACCTCCAATGCCATATaGCTTTCCTCTTGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGYGFEESRSLVPICQGMTSNAI*LSSCPV Trigger: AACAGGGCAAGAGGAAAGGCATATGGCATTGGAGGT...CATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | CGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGGACAGTGCCATCTGGTaGTTTCTTGGCTGTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGYGFEESRSLVPICQGMDSAIW*FLGCVF Trigger: AAACACACAGCCAAGAAAGCACCAGATGGCACTGTC...CATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | GTACTGAGGAAGGGGTGGTACCCACCTCAGATGGGAGTTGAGACCATTGCAACTACAGGCTGCAGGACTTaGATTCAATGCACTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLRKGWYPPQMGVETIATTGCRT*IQCTAS Trigger: GCTGGCAGTGCATTGAATGCAAGTCCTGCAGCCTGT...AGTTGCAATGGTCTCAACTCCCATCTGAGGTGGGTACCACCCCTTCCTCAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS-3UTR GCA 90 bp | TTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGAACACCTTGGACAGTGCCATCTGGTaGTTTCTTGGCTGTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LDPATHRVTFHLQRENTLDSAIW*FLGCVF Trigger: AAACACACAGCCAAGAAAGCACCAGATGGCACTGTC...CAAGGTGTTCTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CCA 90 bp | GGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGAAGAGGGGGATGGTAGCTGAGTCCTaGCCGGTTCTTATATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFEESRSLVPICQGMKRGMVAES*PVLISL Trigger: AAGAGATATAAGAACCGGCCAGGACTCAGCTACCAT...CCCCCTCTTCATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108231.8 |
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| CDS-3UTR CCA 90 bp | CGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGATGGTAGCTGAGTCCTaGCCGGTTCTTATATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGYGFEESRSLVPICQGMMVAES*PVLISL Trigger: AAGAGATATAAGAACCGGCCAGGACTCAGCTACCAT...CATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108231.8 |
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| CDS-3UTR CCA 90 bp | AAAACCATAGTTCACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTGGTACTGGTTGTTTTTCCGGTaGAAAGGCAGGGCGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KTIVHMQYPRWVLRKGWYWLFFR*KGRAWR Trigger: ACGCCACGCCCTGCCTTTCCACCGGAAAAACAACCA...GTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTGAACTATGGTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
||
| CDS-3UTR TCA 90 bp | AAAACCATAGTTCACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTGGTACAGTAGCCATTGGGGATaGCAGTGCCATCTGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KTIVHMQYPRWVLRKGWYSSHWG*QCHLVL Trigger: AAGCACCAGATGGCACTGTCATCCCCAATGGCTACT...GTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTGAACTATGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | AACCATAGTTCACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTGGTACCCACCTCCAATGCCATATaGCTTTCCTCTTGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NHSSHAVSTVGTEEGVVPTSNAI*LSSCPV Trigger: AACAGGGCAAGAGGAAAGGCATATGGCATTGGAGGT...GGGTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTGAACTATGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGACACTCAACAGTGCCTCTCCACCCAGCCAGGCTTTATAGGACTCTTTGACAGTGCCATCTGGTaGTTTCTTGGCTGTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PADTQQCLSTQPGFIGLFDSAIW*FLGCVF Trigger: AAACACACAGCCAAGAAAGCACCAGATGGCACTGTC...AAAGAGTCCTATAAAGCCTGGCTGGGTGGAGAGGCACTGTTGAGTGTCTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
||
| CDS-3UTR TCA 90 bp | AAAACCATAGTTCACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTGGTACGTTTCTGACAGTCCATaGTGGTCTCCTCCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTIVHMQYPRWVLRKGWYVSDSP*WSPPPS Trigger: TGAAGGAGGAGGAGACCATCATGGACTGTCAGAAAC...GTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTGAACTATGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
||
| CDS-3UTR GCA 90 bp | AAAACCATAGTTCACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTGGTACTGCGGAGACCTCCAATaGCATATGCCTTTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KTIVHMQYPRWVLRKGWYCGDLQ*HMPFLL Trigger: CAAGAGGAAAGGCATATGGCATTGGAGGTCTCCGCA...GTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTGAACTATGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
||
| CDS-3UTR CCA 90 bp | AAAACCATAGTTCACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTGGTACCCCTGTTCTTCCTCCTaGGAATGTCTTCCTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KTIVHMQYPRWVLRKGWYPCSSS*ECLPPS Trigger: ACTTGGAGGAAGACATTCCCAGGAGGAAGAACAGGG...GTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTGAACTATGGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
||
| CDS CCA 90 bp | TGCGCTCGGCACACAGGCGCGCGTTGTAGCTGCGACAGTGCTCGATaGCCTCCCGGTAGAAGTCCTCGCCAAGGCTCAGGGGGCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CARHTGARCSCDSAR*PPGRSPRQGSGGWG Trigger: TCCCCAGCCCCCTGAGCCTTGGCGAGGACTTCTACCGGGAGGCCATCGAGCACTGTCGCAGCTACAACGCGCGCCTGTGTGCCGAGCGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065181.12 ENSMUST00000108230.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTTCCACTGGGGACACCGGGTGGGGAGCGCCAGGAGCTCCAAGAGGCAGGAGCGGTGTCCTGGCGTTaGCGGAGACCTCCAATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLPLGTPGGERQELQEAGAVSWR*RRPPMP Trigger: TGGCATTGGAGGTCTCCGCAAACGCCAGGACACCGC...TCCTGCCTCTTGGAGCTCCTGGCGCTCCCCACCCGGTGTCCCCAGTGGAAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CAA 90 bp | CTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGGCGGTGTCCTGGCGTTaGCGGAGACCTCCAATGCCA | + |
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Preference number: 5 (lower is better) Translates to: LASTTPLCPPKGGGMALRAVSWR*RRPPMP Trigger: TGGCATTGGAGGTCTCCGCAAACGCCAGGACACCGC...CCTCAAAGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CAA 90 bp | GGGACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGGCCTCACAATCGATCTaGTACTCGCAGGGCCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: GTLLDPATHRVTFHLQREASQSI*YSQGRS Trigger: GCTCCGGCCCTGCGAGTACAAGATCGATTGTGAGGC...CTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CAA 90 bp | AGGAGGGACCCTGTTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGCGGTGTCCTGGCGTTaGCGGAGACCTCCAATGCCA | + |
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Preference number: 5 (lower is better) Translates to: RRDPVGPSHPQGNIPLAEAVSWR*RRPPMP Trigger: TGGCATTGGAGGTCTCCGCAAACGCCAGGACACCGC...CTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAACAGGGTCCCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CAA 90 bp | TGCTGGCTAGCATCCACTACCCCTCTATGCCCGCCCAAAGGCGGGGGTATGGCTTCACAGACGTACGGCTaGTCTCGGTCCTCCAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: CWLASTTPLCPPKGGGMASQTYG*SRSSRD Trigger: ATCCCTGGAGGACCGAGACAAGCCGTACGTCTGTGA...AGCCATACCCCCGCCTTTGGGCGGGCATAGAGGGGTAGTGGATGCTAGCCAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CAA 90 bp | TGCCCGCCCAAAGGCGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCACACAGGCTGCAGGACTaGCATTCAATGCACTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: CPPKGGGMALRRAEAWCPHRLQD*HSMHCQ Trigger: CTGGCAGTGCATTGAATGCAAGTCCTGCAGCCTGTG...TGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCGCCTTTGGGCGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CAA 90 bp | CGGGTGGGGAGCGCCAGGAGCTCCAAGAGGCAGGAGATAGCACCACCCAAAGATGGGTCCTCCAGGATGTaGAGTCTCCGTTTCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: RVGSARSSKRQEIAPPKDGSSRM*SLRFFL Trigger: GAGGAAGAAACGGAGACTCAACATCCTGGAGGACCC...ATCTTTGGGTGGTGCTATCTCCTGCCTCTTGGAGCTCCTGGCGCTCCCCACCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CAA 90 bp | GAGCGCCAGGAGCTCCAAGAGGCAGGAGATAGCACCACCCAAAGATCCTGGGGATCACAGACGTACGGCTaGTCTCGGTCCTCCAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: ERQELQEAGDSTTQRSWGSQTYG*SRSSRD Trigger: ATCCCTGGAGGACCGAGACAAGCCGTACGTCTGTGA...TCCCCAGGATCTTTGGGTGGTGCTATCTCCTGCCTCTTGGAGCTCCTGGCGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS GCA 90 bp | CGTACGGCTTGTCTCGGTCCTCCAGGGATGCGGTGTCCTGGCGTTTaGGGAGACCTCCAATGCCATATGCCTTTCCTCTTGCCCTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: RTACLGPPGMRCPGV*GDLQCHMPFLLPCS Trigger: AGAACAGGGCAAGAGGAAAGGCATATGGCATTGGAGGTCTCCGCAAACGCCAGGACACCGCATCCCTGGAGGACCGAGACAAGCCGTACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CAA 90 bp | AAACACACACAACCACGAGAAACAACCACACCCCCTTGCCACCCCCAAATGGCTGCGGTGTCCTGGCGTTaGCGGAGACCTCCAATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KHTQPRETTTPPCHPQMAAVSWR*RRPPMP Trigger: TGGCATTGGAGGTCTCCGCAAACGCCAGGACACCGC...AGCCATTTGGGGGTGGCAAGGGGGTGTGGTTGTTTCTCGTGGTTGTGTGTGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049977.13 |
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| CDS-3UTR CAA 90 bp | GGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGAAGAGGGGGTCACAGACGTACGGCTaGTCTCGGTCCTCCAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: GFEESRSLVPICQGMKRGSQTYG*SRSSRD Trigger: ATCCCTGGAGGACCGAGACAAGCCGTACGTCTGTGA...CCCCCTCTTCATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS CCA 90 bp | ACAGTGCCATCTGGTGCTTTCTTGGGTTTATGGTTGTTTTTCCGGTaGAAAGGCAGGGCGTGGCGTTCAGTGTGCTCCTCCCCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVPSGAFLGLWLFFR*KGRAWRSVCSSPSS Trigger: GGAGGAGGGGGAGGAGCACACTGAACGCCACGCCCTGCCTTTCCACCGGAAAAACAACCATAAACCCAAGAAAGCACCAGATGGCACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142958.2 |
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| CDS-3UTR CAA 90 bp | CACATGCAGTATCCACGGTGGGTACTGAGGAAGGGGTGGTACCCACCTCAGATGGGGTCCTCCAGGATGTaGAGTCTCCGTTTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HMQYPRWVLRKGWYPPQMGSSRM*SLRFFL Trigger: GAGGAAGAAACGGAGACTCAACATCCTGGAGGACCC...CATCTGAGGTGGGTACCACCCCTTCCTCAGTACCCACCGTGGATACTGCATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS-3UTR CAA 90 bp | CGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGGGGTCCTCCAGGATGTaGAGTCTCCGTTTCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: RGYGFEESRSLVPICQGMGSSRM*SLRFFL Trigger: GAGGAAGAAACGGAGACTCAACATCCTGGAGGACCC...CATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CAA 90 bp | CGGGGGTATGGCTTTGAGGAGAGCAGAAGCCTGGTGCCCATTTGTCAAGGGATGCACAGGCTGCAGGACTaGCATTCAATGCACTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGYGFEESRSLVPICQGMHRLQD*HSMHCQ Trigger: CTGGCAGTGCATTGAATGCAAGTCCTGCAGCCTGTG...CATCCCTTGACAAATGGGCACCAGGCTTCTGCTCTCCTCAAAGCCATACCCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS-3UTR CAA 90 bp | TTGGACCCAGCCACCCACAGGGTAACATTCCACTTGCAGAGGGAGAACACCTTGCACAGGCTGCAGGACTaGCATTCAATGCACTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LDPATHRVTFHLQRENTLHRLQD*HSMHCQ Trigger: CTGGCAGTGCATTGAATGCAAGTCCTGCAGCCTGTG...CAAGGTGTTCTCCCTCTGCAAGTGGAATGTTACCCTGTGGGTGGCTGGGTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS GCA 90 bp | GTAAAACTTATCACAGACGTACGGCTTGTCTCGGTCCTCCAGGGATaGGGTGTCCTGGCGTTTGCGGAGACCTCCAATGCCATATGCCTT | + |
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Preference number: 5 (lower is better) Translates to: VKLITDVRLVSVLQG*GVLAFAETSNAICL Trigger: AAGGCATATGGCATTGGAGGTCTCCGCAAACGCCAGGACACCGCATCCCTGGAGGACCGAGACAAGCCGTACGTCTGTGATAAGTTTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108230.8 |
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| CDS-3UTR CAA 90 bp | GTACTGAGGAAGGGGTGGTACCCACCTCAGATGGGAGTTGAGACCATTGCAACTGGGTCCTCCAGGATGTaGAGTCTCCGTTTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VLRKGWYPPQMGVETIATGSSRM*SLRFFL Trigger: GAGGAAGAAACGGAGACTCAACATCCTGGAGGACCC...AGTTGCAATGGTCTCAACTCCCATCTGAGGTGGGTACCACCCCTTCCTCAGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000108231.8 |
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| CDS GCA 72 bp | GCAGGCTGCGCTCGGCACACAGGCGCGCGTTGTAGCTaGGACAGTGCTCGATGGCCTCCCGGTAGAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: AGCARHTGARCS*DSARWPPGRSP Trigger: AGGACTTCTACCGGGAGGCCATCGAGCACTGTCGCAGCTACAACGCGCGCCTGTGTGCCGAGCGCAGCCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS CCA 72 bp | CACACAGGCGCGCGTTGTAGCTGCGACAGTGCTCGATaGCCTCCCGGTAGAAGTCCTCGCCAAGGCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: HTGARCSCDSAR*PPGRSPRQGSG Trigger: CCCTGAGCCTTGGCGAGGACTTCTACCGGGAGGCCATCGAGCACTGTCGCAGCTACAACGCGCGCCTGTGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065181.12 ENSMUST00000108230.8 |
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| CDS CAA 72 bp | TACTCGCAGGGCCGGAGCCTGGGGTCCTCCAGGATGTaGAGTCTCCGTTTCTTCCTCCAACAGCGGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: YSQGRSLGSSRM*SLRFFLQQRAG Trigger: CCCCGCCCGCTGTTGGAGGAAGAAACGGAGACTCAACATCCTGGAGGACCCCAGGCTCCGGCCCTGCGAGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 ENSMUST00000137848.2 |
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| CDS TCA 72 bp | AGGGATGTCCTGATCGCCCACAGTCCGCACAGGAGATaGGGTCCTCGGGACACCCAGTCTTCTTGGAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: RDVLIAHSPHRR*GPRDTQSSWSP Trigger: GGGGCTCCAAGAAGACTGGGTGTCCCGAGGACCTCATCTCCTGTGCGGACTGTGGGCGATCAGGACATCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 ENSMUST00000142958.2 |
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| CDS GCA 72 bp | TGGCCCTTCCGGGAGGCCACCCTCCTTCTTCAGAGGTaGCTCACAATCGATCTTGTACTCGCAGGGCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: WPFREATLLLQR*LTIDLVLAGPE Trigger: CTCCGGCCCTGCGAGTACAAGATCGATTGTGAGGCACCTCTGAAGAAGGAGGGTGGCCTCCCGGAAGGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 ENSMUST00000137848.2 |
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| CDS GCA 72 bp | TGTCTCGGTCCTCCAGGGATGCGGTGTCCTGGCGTTTaGGGAGACCTCCAATGCCATATGCCTGACAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: CLGPPGMRCPGV*GDLQCHMPDSP Trigger: TGGACTGTCAGGCATATGGCATTGGAGGTCTCCGCAAACGCCAGGACACCGCATCCCTGGAGGACCGAGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137848.2 |
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| CDS CCA 72 bp | GGTTTATGGTTGTTTTTCCGGTGGAAAGGCAGGGCGTaGCGTTCAGTGTGCTCCTCCCCCTCCTCCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLWLFFRWKGRA*RSVCSSPSSSA Trigger: GGCTGAGGAGGAGGGGGAGGAGCACACTGAACGCCACGCCCTGCCTTTCCACCGGAAAAACAACCATAAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142958.2 |
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| CDS CAA 90 bp | ACGTACGGCTTGTCTCGGTCCTCCAGGGATGCGGTGTCCTGGCGTTaGCGGAGACCTCCAATGCCATATGCCTTTCCTCTTGCCCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: TYGLSRSSRDAVSWR*RRPPMPYAFPLALF Trigger: GAACAGGGCAAGAGGAAAGGCATATGGCATTGGAGGTCTCCGCAAACGCCAGGACACCGCATCCCTGGAGGACCGAGACAAGCCGTACGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS GCA 72 bp | TGTCTCGGTCCTCCAGGGATGCGGTGTCCTGGCGTTTaGGGAGACCTCCAATGCCATATGCCTTTCCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CLGPPGMRCPGV*GDLQCHMPFLL Trigger: CAAGAGGAAAGGCATATGGCATTGGAGGTCTCCGCAAACGCCAGGACACCGCATCCCTGGAGGACCGAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS CCA 72 bp | TGTTTATGGTTGTTTTTCCGGTGGAAAGGCAGGGCGTaGCGTTCAGTGTGCTCCTCCCCCTCCTCCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CLWLFFRWKGRA*RSVCSSPSSSA Trigger: GGCTGAGGAGGAGGGGGAGGAGCACACTGAACGCCACGCCCTGCCTTTCCACCGGAAAAACAACCATAAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108231.8 |
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| CDS CAA 72 bp | TTGTCTCGGTCCTCCAGGGATGCGGTGTCCTGGCGTTaGCGGAGACCTCCAATGCCATATGCCTTTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSRSSRDAVSWR*RRPPMPYAFPL Trigger: AAGAGGAAAGGCATATGGCATTGGAGGTCTCCGCAAACGCCAGGACACCGCATCCCTGGAGGACCGAGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS GCA 72 bp | GTCACAGTAGCCATTGGGGATGACAGTGCCATCTGGTaGTTTCTTGGCTGTGTGTTTCCTCTGTGCCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: VTVAIGDDSAIW*FLGCVFPLCLG Trigger: CCCGAGGCACAGAGGAAACACACAGCCAAGAAAGCACCAGATGGCACTGTCATCCCCAATGGCTACTGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 ENSMUST00000108230.8 ENSMUST00000108231.8 |
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| CDS GCA 72 bp | CATCACAGAACAGCAGCTGGTCGTCATTCTCCGAGGTaGCACACAGGCTGCAGGACTTGCATTCAATGCACT | + |
|
Preference number: 6 (lower is better) Translates to: HHRTAAGRHSPR*HTGCRTCIQCT Trigger: AGTGCATTGAATGCAAGTCCTGCAGCCTGTGTGGCACCTCGGAGAATGACGACCAGCTGCTGTTCTGTGATG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049977.13 ENSMUST00000065181.12 |
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| CDS CCA 72 bp | TCTGGTGCTTTCTTGGGTTTATGGTTGTTTTTCCGGTaGAAAGGCAGGGCGTGGCGTTCAGTGTGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SGAFLGLWLFFR*KGRAWRSVCSS Trigger: GGAGGAGCACACTGAACGCCACGCCCTGCCTTTCCACCGGAAAAACAACCATAAACCCAAGAAAGCACCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142958.2 |
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| CDS CAA 72 bp | ATGACAGTGCCATCTGGTGCTTTCTTGGGTTTATGGTaGTTTTTCCGGTGGAAAGGCAGGGCGTGGCGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: MTVPSGAFLGLW*FFRWKGRAWRS Trigger: TGAACGCCACGCCCTGCCTTTCCACCGGAAAAACAACCATAAACCCAAGAAAGCACCAGATGGCACTGTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142958.2 |
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