Pregenerated sensors for DPEP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031898Ensembl transcript IDs: ENSMUST00000034371.9
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GGCGTGATGTTTCAGGTATTTATTCTCAACATAAGCTaGGGTCTCAGCAATGAGGAGGGGAACTTTGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: GVMFQVFILNIS*GLSNEEGNFVG Trigger: ACCCACAAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTGAAACATCACGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR GCA 90 bp | TTTCAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACAGCAGGGACAGCCGGTaGCCCAGAGGCCGCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: FQVFILNISWGLSNEEGNSRDSR*PRGRRP Trigger: CGGCCTGCGGCCTCTGGGGCACCGGCTGTCCCTGCT...GTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR TCA 90 bp | ATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTGTGGGTTTTGCCTCTCTGGAAACTTaGCCTCCACAGGGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: ILNISWGLSNEEGNFVGFASLET*PPQGSA Trigger: GGCAGAGCCCTGTGGAGGTCAAGTTTCCAGAGAGGC...AAAACCCACAAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR GCA 90 bp | ATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTGTGGGTTTTACCTCCACAGGGCTCTaGCCAAGGCTTTTCTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: ILNISWGLSNEEGNFVGFTSTGL*PRLFSL Trigger: GAGAGAGAAAAGCCTTGGGCAGAGCCCTGTGGAGGT...AAAACCCACAAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR GCA 90 bp | CAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTGGGAGTGGCAGGTGTTaGTCTGCTGCCTCTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: QVFILNISWGLSNEEGNFGSGRC*SAASLE Trigger: TTCCAGAGAGGCAGCAGAGCAACACCTGCCACTCCC...AAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR CCA 90 bp | CAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTGCAACACAGCGAGGCTaGTGTCCAGTGAGTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: QVFILNISWGLSNEEGNFATQRG*CPVSDH Trigger: GTGGTCACTCACTGGACACCAGCCTCGCTGTGTTGC...AAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR TCA 90 bp | CAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTATTCAGACCATCAGCTaGGGTCACCAGCTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: QVFILNISWGLSNEEGNFIQTIS*GHQLQL Trigger: GAGCTGGAGCTGGTGACCTCAGCTGATGGTCTGAAT...AAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR GCA 90 bp | ATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTGTGGGTTTTCAGGTGTTGCTCTGCTaGCTCTCTGGAAACTTGACC | + |
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Preference number: 4 (lower is better) Translates to: ILNISWGLSNEEGNFVGFQVLLC*LSGNLT Trigger: GGTCAAGTTTCCAGAGAGGCAGCAGAGCAACACCTG...AAAACCCACAAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR CCA 90 bp | GTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTGTGGCTCTGCTGCCTCTCTaGAAACTTGACCTCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: VFILNISWGLSNEEGNFVALLPL*KLDLHR Trigger: CCTGTGGAGGTCAAGTTTCCAGAGAGGCAGCAGAGC...CACAAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR TCA 90 bp | TTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTGTGGGTAGGCAGGCCAGCTTCTaGGTGTTATTCAGACCATCA | + |
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Preference number: 4 (lower is better) Translates to: FILNISWGLSNEEGNFVGRQASF*VLFRPS Trigger: TGATGGTCTGAATAACACTCAGAAGCTGGCCTGCCT...ACCCACAAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR GCA 90 bp | CAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTTGGCAGGTGTTGCTCTaGTGCCTCTCTGGAAACTTG | + |
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Preference number: 4 (lower is better) Translates to: QVFILNISWGLSNEEGNFWQVLL*CLSGNL Trigger: CAAGTTTCCAGAGAGGCAGCAGAGCAACACCTGCCA...AAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR CCA 90 bp | TTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTGTGGGTAAGGTGTCCGAGGCGTaGGACAAGTCTATCATCATG | + |
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Preference number: 4 (lower is better) Translates to: FILNISWGLSNEEGNFVGKVSEA*DKSIIM Trigger: CATGATGATAGACTTGTCCCACGCCTCGGACACCTT...ACCCACAAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR TCA 90 bp | ATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTGTGGGTTTTCTGATGTGGTCAAAATaGTCTGCTACAGTGGACACG | + |
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Preference number: 4 (lower is better) Translates to: ILNISWGLSNEEGNFVGFLMWSK*SATVDT Trigger: CGTGTCCACTGTAGCAGATCATTTTGACCACATCAG...AAAACCCACAAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR GCA 90 bp | TTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTGTGGGTCGCAGATTCACATCCTaGAGCTGGTTCTGGAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: FILNISWGLSNEEGNFVGRRFTS*SWFWKS Trigger: ACTTTTCCAGAACCAGCTGCAGGATGTGAATCTGCG...ACCCACAAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR CCA 90 bp | TTTCAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACACTGTAGCACCCCCATaGATAGTGTCACCATCACGA | + |
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Preference number: 4 (lower is better) Translates to: FQVFILNISWGLSNEEGNTVAPP*IVSPSR Trigger: TCGTGATGGTGACACTATCCATGGGGGTGCTACAGT...GTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR CCA 90 bp | GGCGTGATGTTTCAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGTCCTGCAGCTGGTTCTaGAAAAGTTCTCTCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GVMFQVFILNISWGLSNESCSWF*KSSLKS Trigger: GCTCTTGAGAGAACTTTTCCAGAACCAGCTGCAGGA...CTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTGAAACATCACGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR CCA 90 bp | CAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTTCTCTGGAGGATGTTTaGCAGCTTTGTCACCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: QVFILNISWGLSNEEGNFSLEDV*QLCHLQ Trigger: CTGAAGGTGACAAAGCTGCCAAACATCCTCCAGAGA...AAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR CCA 90 bp | ATGTTTCAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGTTCACATCCTGCAGCTaGTTCTGGAAAAGTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: MFQVFILNISWGLSNEEGFTSCS*FWKSSL Trigger: GAGAGAACTTTTCCAGAACCAGCTGCAGGATGTGAA...CCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTGAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR CCA 90 bp | ATGTTTCAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGCTCCTCTATCAGCACTaGGTATGTAGATACATCCTC | + |
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Preference number: 4 (lower is better) Translates to: MFQVFILNISWGLSNEEGLLYQH*VCRYIL Trigger: GAGGATGTATCTACATACCCAGTGCTGATAGAGGAG...CCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTGAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR TCA 90 bp | GTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTGTGTGTAGAAATGGTGTCTaGATTTTGTGGCGCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VFILNISWGLSNEEGNFVCRNGV*ILWRFL Trigger: CAGAAAGCGCCACAAAATTCAGACACCATTTCTACA...CACAAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS CCA 90 bp | AGCTGGTTCTGGAAAAGTTCTCTCAAGAGCAGAGGCAGGTCGTTGTaGCCATCCACAAGTGGGAAGTCTCGCATCAGAGCCAGTGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: SWFWKSSLKSRGRSL*PSTSGKSRIRASAC Trigger: GCAAGCACTGGCTCTGATGCGAGACTTCCCACTTGTGGATGGCCACAACGACCTGCCTCTGCTCTTGAGAGAACTTTTCCAGAACCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS CCA 90 bp | TGGCCACGGGTGAAATTGCGCAGATTCACATCCTGCAGCTGGTTCTaGAAAAGTTCTCTCAAGAGCAGAGGCAGGTCGTTGTGGCCATCC | + |
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Preference number: 5 (lower is better) Translates to: WPRVKLRRFTSCSWF*KSSLKSRGRSLWPS Trigger: GGATGGCCACAACGACCTGCCTCTGCTCTTGAGAGAACTTTTCCAGAACCAGCTGCAGGATGTGAATCTGCGCAATTTCACCCGTGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS CCA 90 bp | TTGGTCTGGCCACGGGTGAAATTGCGCAGATTCACATCCTGCAGCTaGTTCTGGAAAAGTTCTCTCAAGAGCAGAGGCAGGTCGTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LVWPRVKLRRFTSCS*FWKSSLKSRGRSLW Trigger: CCACAACGACCTGCCTCTGCTCTTGAGAGAACTTTTCCAGAACCAGCTGCAGGATGTGAATCTGCGCAATTTCACCCGTGGCCAGACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR CAA 90 bp | GGCGTGATGTTTCAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGGAGCGGTCGTGGCATaGGAGGCTTCCGGTGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: GVMFQVFILNISWGLSNEGAVVA*EASGVV Trigger: GACAACACCGGAAGCCTCCAATGCCACGACCGCTCC...CTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTGAAACATCACGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR CAA 90 bp | CAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGAACTTTTGGGAGTGGCAGGTGTaGCTCTGCTGCCTCTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: QVFILNISWGLSNEEGNFWEWQV*LCCLSG Trigger: TCCAGAGAGGCAGCAGAGCAACACCTGCCACTCCCA...AAAGTTCCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR CAA 90 bp | GTGATGTTTCAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGTGGGGAGGGGCTTTaGAGGCTCTCTGGAGGATGT | + |
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Preference number: 5 (lower is better) Translates to: VMFQVFILNISWGLSNEEGGEGL*RLSGGC Trigger: ACATCCTCCAGAGAGCCTCAAAAGCCCCTCCCCACC...CTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTGAAACATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR CAA 90 bp | ATGTTTCAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGTCCTCGAAGGACACCTaGAAGCTCTCGTTCATCCCA | + |
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Preference number: 5 (lower is better) Translates to: MFQVFILNISWGLSNEEGSSKDT*KLSFIP Trigger: TGGGATGAACGAGAGCTTCAAGGTGTCCTTCGAGGA...CCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTGAAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS-3UTR CAA 90 bp | ATGTTTCAGGTATTTATTCTCAACATAAGCTGGGGTCTCAGCAATGAGGAGGGGCTCTCTGGAGGATGTTaGGCAGCTTTGTCACCTTCA | + |
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Preference number: 5 (lower is better) Translates to: MFQVFILNISWGLSNEEGLSGGC*AALSPS Trigger: TGAAGGTGACAAAGCTGCCAAACATCCTCCAGAGAG...CCCCTCCTCATTGCTGAGACCCCAGCTTATGTTGAGAATAAATACCTGAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS GCA 72 bp | GGAACTAGAAGTAACACCCCCAGCAGGGACAGCCGGTaGCCCAGAGGCCGCAGGCCGAGCGCGCGTGGACCC | + |
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Preference number: 6 (lower is better) Translates to: GTRSNTPSRDSR*PRGRRPSARGP Trigger: GGGTCCACGCGCGCTCGGCCTGCGGCCTCTGGGGCACCGGCTGTCCCTGCTGGGGGTGTTACTTCTAGTTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS TCA 72 bp | GGCATCCCGGTCCTGGGTTTGGCACGGGATGTAGGCTaGCCAGAACTGGGCACCCACAAGGCCGTCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: GIPVLGLARDVG*PELGTHKAVPE Trigger: CTCAGGGACGGCCTTGTGGGTGCCCAGTTCTGGTCAGCCTACATCCCGTGCCAAACCCAGGACCGGGATGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS CCA 72 bp | CCCACAAGGCCGTCCCTGAGCCTATCCAGGTTGGTCTaGCCACGGGTGAAATTGCGCAGATTCACATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PTRPSLSLSRLV*PRVKLRRFTSC Trigger: GCAGGATGTGAATCTGCGCAATTTCACCCGTGGCCAGACCAACCTGGATAGGCTCAGGGACGGCCTTGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS CAA 72 bp | GAGTGGCAGGTGTTGCTCTGCTGCCTCTCTGGAAACTaGACCTCCACAGGGCTCTGCCCAAGGCTTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: EWQVLLCCLSGN*TSTGLCPRLFS Trigger: AGAGAAAAGCCTTGGGCAGAGCCCTGTGGAGGTCAAGTTTCCAGAGAGGCAGCAGAGCAACACCTGCCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS CAA 90 bp | TGCAGCTGGTTCTGGAAAAGTTCTCTCAAGAGCAGAGGCAGGTCGTaGTGGCCATCCACAAGTGGGAAGTCTCGCATCAGAGCCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: CSWFWKSSLKSRGRS*WPSTSGKSRIRASA Trigger: AGCACTGGCTCTGATGCGAGACTTCCCACTTGTGGATGGCCACAACGACCTGCCTCTGCTCTTGAGAGAACTTTTCCAGAACCAGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS CCA 72 bp | TGGAAAAGTTCTCTCAAGAGCAGAGGCAGGTCGTTGTaGCCATCCACAAGTGGGAAGTCTCGCATCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: WKSSLKSRGRSL*PSTSGKSRIRA Trigger: GGCTCTGATGCGAGACTTCCCACTTGTGGATGGCCACAACGACCTGCCTCTGCTCTTGAGAGAACTTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS CCA 72 bp | CCACGGGTGAAATTGCGCAGATTCACATCCTGCAGCTaGTTCTGGAAAAGTTCTCTCAAGAGCAGAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PRVKLRRFTSCS*FWKSSLKSRGR Trigger: CCTGCCTCTGCTCTTGAGAGAACTTTTCCAGAACCAGCTGCAGGATGTGAATCTGCGCAATTTCACCCGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS GCA 72 bp | GGTGTAGAAATGGTGTCTGAATTTTGTGGCGCTTTCTaGCCACGGTGTGCTGCAGGTGAAGGTAAGAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: GVEMVSEFCGAF*PRCAAGEGKSQ Trigger: CTGACTCTTACCTTCACCTGCAGCACACCGTGGGCAGAAAGCGCCACAAAATTCAGACACCATTTCTACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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| CDS CAA 72 bp | TTCTGGAAAAGTTCTCTCAAGAGCAGAGGCAGGTCGTaGTGGCCATCCACAAGTGGGAAGTCTCGCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: FWKSSLKSRGRS*WPSTSGKSRIR Trigger: TCTGATGCGAGACTTCCCACTTGTGGATGGCCACAACGACCTGCCTCTGCTCTTGAGAGAACTTTTCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034371.9 |
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