Pregenerated sensors for DPEP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019278Ensembl transcript IDs: ENSMUST00000019422.6, ENSMUST00000212409.2, ENSMUST00000212773.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTCCCCAGGTAAGCCTGCTGCTTATTCAGGAAAGGGTGTGGTTCTaGACGGACAACAGGGACTCTGGGCTTGTCCAGTCTTCCCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: CPQVSLLLIQERVWF*TDNRDSGLVQSSLS Trigger: GCTCAGGGAAGACTGGACAAGCCCAGAGTCCCTGTTGTCCGTGCAGAACCACACCCTTTCCTGAATAAGCAGCAGGCTTACCTGGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR GCA 90 bp | TCAGGTGCTCCCACATCCTGTTCACACAGGGCCGTTCTCAGCATCTaGTCTCCAGAGGCTCAGAAGAATCTCCCAGGGCTGAGATACAGC | + |
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Preference number: 1 (lower is better) Translates to: SGAPTSCSHRAVLSI*SPEAQKNLPGLRYS Trigger: GCTGTATCTCAGCCCTGGGAGATTCTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGCCCTGTGTGAACAGGATGTGGGAGCACCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR GCA 90 bp | GCTAACTTCTGGGTCCCTTCTAGTCCTCCCCTCCAAGAACTCAGGTaGTCCCACATCCTGTTCACACAGGGCCGTTCTCAGCATCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: ANFWVPSSPPLQELR*SHILFTQGRSQHLL Trigger: GAGCAGATGCTGAGAACGGCCCTGTGTGAACAGGATGTGGGAGCACCTGAGTTCTTGGAGGGGAGGACTAGAAGGGACCCAGAAGTTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR CCA 90 bp | TTGAGCTGTCCCCAGGTAAGCCTGCTGCTTATTCAGGAAAGGGTGTaGTTCTGCACGGACAACAGGGACTCTGGGCTTGTCCAGTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: LSCPQVSLLLIQERV*FCTDNRDSGLVQSS Trigger: GGAAGACTGGACAAGCCCAGAGTCCCTGTTGTCCGTGCAGAACCACACCCTTTCCTGAATAAGCAGCAGGCTTACCTGGGGACAGCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR GCA 90 bp | AGAGAGATATGTGTGACTCTCATATGGTATGCGTCAGAATACATGTaGCCGTGTATGATATGTATAATGCATCTGAATATCTATATGTGC | + |
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Preference number: 1 (lower is better) Translates to: REICVTLIWYASEYM*PCMICIMHLNIYMC Trigger: GCACATATAGATATTCAGATGCATTATACATATCATACACGGGCACATGTATTCTGACGCATACCATATGAGAGTCACACATATCTCTCT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR-3UTR CCA 90 bp | ACATCCTGTTCACACAGGGCCGTTCTCAGCATCTGCTCTCCAGAGGCTCAGAAGATTCAGGAAAGGGTGTaGTTCTGCACGGACAACAGG | + |
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Preference number: 2 (lower is better) Translates to: TSCSHRAVLSICSPEAQKIQERV*FCTDNR Trigger: CCTGTTGTCCGTGCAGAACCACACCCTTTCCTGAAT...CTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGCCCTGTGTGAACAGGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR-3UTR TCA 90 bp | GTGATTCAGGAAAGACCCGCAGTTAGCTGTGTGATCATCCCCGGCACCCATTCTCTTAAATGTGGACCATaGTTTTTCAAACTAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: VIQERPAVSCVIIPGTHSLKCGP*FFKLAS Trigger: ACTGGCTAGTTTGAAAAATCATGGTCCACATTTAAG...AGAATGGGTGCCGGGGATGATCACACAGCTAACTGCGGGTCTTTCCTGAATCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR-3UTR GCA 90 bp | TGTAATCTGAATTACAGAACCCAGAGAGATATGTGTGACTCTCATATGGTATGCGAAAGGGTGTGGTTCTaGACGGACAACAGGGACTCT | + |
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Preference number: 2 (lower is better) Translates to: CNLNYRTQRDMCDSHMVCERVWF*TDNRDS Trigger: AGAGTCCCTGTTGTCCGTGCAGAACCACACCCTTTC...GCATACCATATGAGAGTCACACATATCTCTCTGGGTTCTGTAATTCAGATTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR-3UTR GCA 90 bp | TGTAATCTGAATTACAGAACCCAGAGAGATATGTGTGACTCTCATATGGTATGCCTGAATATCTATATGTaGCTGTGTGCACATGAGTAC | + |
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Preference number: 2 (lower is better) Translates to: CNLNYRTQRDMCDSHMVCLNIYM*LCAHEY Trigger: GTACTCATGTGCACACAGGCACATATAGATATTCAG...GCATACCATATGAGAGTCACACATATCTCTCTGGGTTCTGTAATTCAGATTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR TCA 72 bp | CGGACAACAGGGACTCTGGGCTTGTCCAGTCTTCCCTaGGCTCAGAGAGCACTGGAGGAGGTTCCGGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: RTTGTLGLSSLP*AQRALEEVPVL Trigger: AAGGACCGGAACCTCCTCCAGTGCTCTCTGAGCTCAGGGAAGACTGGACAAGCCCAGAGTCCCTGTTGTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR CCA 72 bp | GTTAGCTGTGTGATCATCCCCGGCACCCATTCTACCTaGATCCCACCCGCCAAGGCTGGACCAGATCGAGGT | + |
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Preference number: 3 (lower is better) Translates to: VSCVIIPGTHST*IPPAKAGPDRG Trigger: ACCTCGATCTGGTCCAGCCTTGGCGGGTGGGATCCAGGTAGAATGGGTGCCGGGGATGATCACACAGCTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR GCA 72 bp | TGGGTCCCTTCTAGTCCTCCCCTCCAAGAACTCAGGTaGTCCCACATCCTGTTCACACAGGGCCGTTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: WVPSSPPLQELR*SHILFTQGRSQ Trigger: CTGAGAACGGCCCTGTGTGAACAGGATGTGGGAGCACCTGAGTTCTTGGAGGGGAGGACTAGAAGGGACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR CCA 72 bp | GGAAAGGGTGTGGTTCTGCACGGACAACAGGGACTCTaGGCTTGTCCAGTCTTCCCTGAGCTCAGAGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: GKGVVLHGQQGL*ACPVFPELREH Trigger: GTGCTCTCTGAGCTCAGGGAAGACTGGACAAGCCCAGAGTCCCTGTTGTCCGTGCAGAACCACACCCTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR-3UTR CAA 90 bp | GCCGTTCTCAGCATCTGCTCTCCAGAGGCTCAGAAGAATCTCCCAGGGCTGAGATTGCATGCCTGTGTCTaGAGCTGTCCCCAGGTAAGC | + |
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Preference number: 3 (lower is better) Translates to: AVLSICSPEAQKNLPGLRLHACV*SCPQVS Trigger: GCTTACCTGGGGACAGCTCAAGACACAGGCATGCAA...TCTCAGCCCTGGGAGATTCTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR CCA 72 bp | CCCCAGGTAAGCCTGCTGCTTATTCAGGAAAGGGTGTaGTTCTGCACGGACAACAGGGACTCTGGGCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: PQVSLLLIQERV*FCTDNRDSGLV Trigger: GACAAGCCCAGAGTCCCTGTTGTCCGTGCAGAACCACACCCTTTCCTGAATAAGCAGCAGGCTTACCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR CCA 72 bp | CGGCACCCATTCTACCTGGATCCCACCCGCCAAGGCTaGACCAGATCGAGGTTACCCATTACCTATGTAATC | + |
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Preference number: 3 (lower is better) Translates to: RHPFYLDPTRQG*TRSRLPITYVI Trigger: GATTACATAGGTAATGGGTAACCTCGATCTGGTCCAGCCTTGGCGGGTGGGATCCAGGTAGAATGGGTGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR CCA 72 bp | CTAGCCAGTGCTTACGTGAGACCCTTTGCTAACTTCTaGGTCCCTTCTAGTCCTCCCCTCCAAGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: LASAYVRPFANF*VPSSPPLQELR Trigger: CCTGAGTTCTTGGAGGGGAGGACTAGAAGGGACCCAGAAGTTAGCAAAGGGTCTCACGTAAGCACTGGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR TCA 72 bp | TGGACCAGATCGAGGTTACCCATTACCTATGTAATCTaGATTACAGAACCCAGAGAGATATGTGTGACTCTC | + |
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Preference number: 3 (lower is better) Translates to: WTRSRLPITYVI*ITEPREICVTL Trigger: GAGAGTCACACATATCTCTCTGGGTTCTGTAATTCAGATTACATAGGTAATGGGTAACCTCGATCTGGTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR GCA 72 bp | AGAACCCAGAGAGATATGTGTGACTCTCATATGGTATaGGTCAGAATACATGTGCCCGTGTATGATATGTAT | + |
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Preference number: 3 (lower is better) Translates to: RTQRDMCDSHMV*VRIHVPVYDMY Trigger: ATACATATCATACACGGGCACATGTATTCTGACGCATACCATATGAGAGTCACACATATCTCTCTGGGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| 3UTR CCA 72 bp | ATTACAGAACCCAGAGAGATATGTGTGACTCTCATATaGTATGCGTCAGAATACATGTGCCCGTGTATGATA | + |
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Preference number: 3 (lower is better) Translates to: ITEPREICVTLI*YASEYMCPCMI Trigger: TATCATACACGGGCACATGTATTCTGACGCATACCATATGAGAGTCACACATATCTCTCTGGGTTCTGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR TCA 90 bp | AGGGTGTGGTTCTGCACGGACAACAGGGACTCTGGGCTTGTCCAGTCTTCCCTGCGCCTGCCACCTTCTTaGTGTGGTCCAGGTGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: RVWFCTDNRDSGLVQSSLRLPPS*CGPGGQ Trigger: CTGACCACCTGGACCACATCAAGAAGGTGGCAGGCG...CAGGGAAGACTGGACAAGCCCAGAGTCCCTGTTGTCCGTGCAGAACCACACCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR GCA 90 bp | GCCGTTCTCAGCATCTGCTCTCCAGAGGCTCAGAAGAATCTCCCAGGGCTGAGACACAGCCCCAGCGCCTaGCACCTTCTTGATGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: AVLSICSPEAQKNLPGLRHSPSA*HLLDVV Trigger: GACCACATCAAGAAGGTGGCAGGCGCTGGGGCTGTG...TCTCAGCCCTGGGAGATTCTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR CCA 90 bp | CTGCTGCTTATTCAGGAAAGGGTGTGGTTCTGCACGGACAACAGGGACTCTGGGCCACGCCGATCAGACTaGCCACTTTCCCCCTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: LLLIQERVWFCTDNRDSGPRRSD*PLSPSG Trigger: TCCGGAGGGGGAAAGTGGCCAGTCTGATCGGCGTGG...CCCAGAGTCCCTGTTGTCCGTGCAGAACCACACCCTTTCCTGAATAAGCAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR GCA 90 bp | AGGGTGTGGTTCTGCACGGACAACAGGGACTCTGGGCTTGTCCAGTCTTCCCTGGGGTCAGATACCGCATaGCCAGATGGTAGAGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RVWFCTDNRDSGLVQSSLGSDTA*PDGRVS Trigger: GGACACTCTACCATCTGGGCATGCGGTATCTGACCC...CAGGGAAGACTGGACAAGCCCAGAGTCCCTGTTGTCCGTGCAGAACCACACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR GCA 90 bp | CAGGGCCGTTCTCAGCATCTGCTCTCCAGAGGCTCAGAAGAATCTCCCAGGGCTGGTGCCCTGGAGATCTaGAAAGCGTCCTTCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: QGRSQHLLSRGSEESPRAGALEI*KASFMV Trigger: CACCATGAAGGACGCTTTGCAGATCTCCAGGGCACC...AGCCCTGGGAGATTCTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR CCA 90 bp | CAGGTGCTCCCACATCCTGTTCACACAGGGCCGTTCTCAGCATCTGCTCTCCAGAAGCGTCCTTCATGGTaGCCACAGACACGTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: QVLPHPVHTGPFSASALQKRPSW*PQTRGT Trigger: TGTCCCACGTGTCTGTGGCCACCATGAAGGACGCTT...CTGGAGAGCAGATGCTGAGAACGGCCCTGTGTGAACAGGATGTGGGAGCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR CCA 90 bp | TGGTTCTGCACGGACAACAGGGACTCTGGGCTTGTCCAGTCTTCCCTGAGCTCAGCAAAGCGTCCTTCATaGTGGCCACAGACACGTGGG | + |
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Preference number: 4 (lower is better) Translates to: WFCTDNRDSGLVQSSLSSAKRPS*WPQTRG Trigger: CCCACGTGTCTGTGGCCACCATGAAGGACGCTTTGC...TGAGCTCAGGGAAGACTGGACAAGCCCAGAGTCCCTGTTGTCCGTGCAGAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR TCA 90 bp | GTGAGACCCTTTGCTAACTTCTGGGTCCCTTCTAGTCCTCCCCTCCAAGAACTCGCGCTTCCCAAAGGGTaGCAGTCCATGGCTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: VRPFANFWVPSSPPLQELALPKG*QSMALS Trigger: GCTGAGAGCCATGGACTGTCACCCTTTGGGAAGCGC...GAGTTCTTGGAGGGGAGGACTAGAAGGGACCCAGAAGTTAGCAAAGGGTCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR TCA 90 bp | CAGGTGCTCCCACATCCTGTTCACACAGGGCCGTTCTCAGCATCTGCTCTCCAGGGGACAGGTCAATCATaGCACCCAAGCGGTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: QVLPHPVHTGPFSASALQGTGQS*HPSGSS Trigger: AGATGAACCGCTTGGGTGTCATGATTGACCTGTCCC...CTGGAGAGCAGATGCTGAGAACGGCCCTGTGTGAACAGGATGTGGGAGCACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR TCA 90 bp | GCCGTTCTCAGCATCTGCTCTCCAGAGGCTCAGAAGAATCTCCCAGGGCTGAGACAGCTAGCAAACCTCTaGCCTCGGTCTCTGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: AVLSICSPEAQKNLPGLRQLANL*PRSLSS Trigger: ACTGGACAGAGACCGAGGTCAGAGGTTTGCTAGCTG...TCTCAGCCCTGGGAGATTCTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR CCA 90 bp | CCTGTTCACACAGGGCCGTTCTCAGCATCTGCTCTCCAGAGGCTCAGAAGAATCAGTCCGAAGCACAGATaGCCAGCAGAGACCAGAACC | + |
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Preference number: 4 (lower is better) Translates to: PVHTGPFSASALQRLRRISPKHR*PAETRT Trigger: GGTTCTGGTCTCTGCTGGCCATCTGTGCTTCGGACT...GATTCTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGCCCTGTGTGAACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR CCA 90 bp | ACATCCTGTTCACACAGGGCCGTTCTCAGCATCTGCTCTCCAGAGGCTCAGAAGGGCGTGTTGCAATTGTaGGTGAGGGTCAGATACCGC | + |
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Preference number: 4 (lower is better) Translates to: TSCSHRAVLSICSPEAQKGVLQL*VRVRYR Trigger: GCGGTATCTGACCCTCACCCACAATTGCAACACGCC...CTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGCCCTGTGTGAACAGGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR CCA 90 bp | CTGCTGCTTATTCAGGAAAGGGTGTGGTTCTGCACGGACAACAGGGACTCTGGGCACATTCCGCCTGTGTaGACACAGGCTGTAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LLLIQERVWFCTDNRDSGHIPPV*TQAVGR Trigger: TCTGCCTACAGCCTGTGTCCACACAGGCGGAATGTG...CCCAGAGTCCCTGTTGTCCGTGCAGAACCACACCCTTTCCTGAATAAGCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR TCA 90 bp | ACATCCTGTTCACACAGGGCCGTTCTCAGCATCTGCTCTCCAGAGGCTCAGAAGCAAGGTGGCGCTGTCTaGACAGGACACAAAGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: TSCSHRAVLSICSPEAQKQGGAV*TGHKVA Trigger: AGCAACTTTGTGTCCTGTTCAGACAGCGCCACCTTG...CTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGCCCTGTGTGAACAGGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR CCA 90 bp | GTGAGACCCTTTGCTAACTTCTGGGTCCCTTCTAGTCCTCCCCTCCAAGAACTCCTGCTGTCAATTAAGTaGCCGCCTTCCACGCCGATC | + |
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Preference number: 4 (lower is better) Translates to: VRPFANFWVPSSPPLQELLLSIK*PPSTPI Trigger: GATCGGCGTGGAAGGCGGCCACTTAATTGACAGCAG...GAGTTCTTGGAGGGGAGGACTAGAAGGGACCCAGAAGTTAGCAAAGGGTCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR CCA 90 bp | GCCGTTCTCAGCATCTGCTCTCCAGAGGCTCAGAAGAATCTCCCAGGGCTGAGAAAGGGTGACAGTCCATaGCTCTCAGCCTCATCATCT | + |
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Preference number: 4 (lower is better) Translates to: AVLSICSPEAQKNLPGLRKGDSP*LSASSS Trigger: AGATGATGAGGCTGAGAGCCATGGACTGTCACCCTT...TCTCAGCCCTGGGAGATTCTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR TCA 90 bp | GTGATTCAGGAAAGACCCGCAGTTAGCTGTGTGATCATCCCCGGCACCCATTCTCTGTCCAGTTCCTCCTaGGAAGCTCAGCTATCAGGT | + |
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Preference number: 4 (lower is better) Translates to: VIQERPAVSCVIIPGTHSLSSSS*EAQLSG Trigger: ACCTGATAGCTGAGCTTCTCAGGAGGAACTGGACAG...AGAATGGGTGCCGGGGATGATCACACAGCTAACTGCGGGTCTTTCCTGAATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR CCA 90 bp | CTGCTGCTTATTCAGGAAAGGGTGTGGTTCTGCACGGACAACAGGGACTCTGGGAGCCAGCCTTCAGCTTaGGGATGTTGGTGTGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: LLLIQERVWFCTDNRDSGSQPSA*GCWCVF Trigger: AAACACACACCAACATCCCCAAGCTGAAGGCTGGCT...CCCAGAGTCCCTGTTGTCCGTGCAGAACCACACCCTTTCCTGAATAAGCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR CCA 90 bp | GTGAGACCCTTTGCTAACTTCTGGGTCCCTTCTAGTCCTCCCCTCCAAGAACTCGTGGCTGAAGATGACTaGTGCCCTGGAGATCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: VRPFANFWVPSSPPLQELVAEDD*CPGDLQ Trigger: TTGCAGATCTCCAGGGCACCAGTCATCTTCAGCCAC...GAGTTCTTGGAGGGGAGGACTAGAAGGGACCCAGAAGTTAGCAAAGGGTCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR TCA 90 bp | CTTGAGCTGTCCCCAGGTAAGCCTGCTGCTTATTCAGGAAAGGGTGTGGTTCTGAGGACACAAAGTTGCTaGAGAAGTTCACCATCACCA | + |
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Preference number: 4 (lower is better) Translates to: LELSPGKPAAYSGKGVVLRTQSC*RSSPSP Trigger: TGGTGATGGTGAACTTCTTCAGCAACTTTGTGTCCT...CAGAACCACACCCTTTCCTGAATAAGCAGCAGGCTTACCTGGGGACAGCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR GCA 90 bp | CTGCTGCTTATTCAGGAAAGGGTGTGGTTCTGCACGGACAACAGGGACTCTGGGAACAAATTTAGCAGTTaGCAAGGCAAGTCGTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LLLIQERVWFCTDNRDSGNKFSS*QGKSLC Trigger: GCACAACGACTTGCCTTGGCAACTGCTAAATTTGTT...CCCAGAGTCCCTGTTGTCCGTGCAGAACCACACCCTTTCCTGAATAAGCAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR CCA 90 bp | ACATCCTGTTCACACAGGGCCGTTCTCAGCATCTGCTCTCCAGAGGCTCAGAAGACGGCATCTTTGTTTTaGGTGTCACAAGGCATGTAT | + |
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Preference number: 4 (lower is better) Translates to: TSCSHRAVLSICSPEAQKTASLF*VSQGMY Trigger: ATACATGCCTTGTGACACCCAAAACAAAGATGCCGT...CTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGCCCTGTGTGAACAGGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR GCA 90 bp | GTGAGACCCTTTGCTAACTTCTGGGTCCCTTCTAGTCCTCCCCTCCAAGAACTCGAGACTGCATGTTATTaGTTACCAGTTCCACTTCAG | + |
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Preference number: 4 (lower is better) Translates to: VRPFANFWVPSSPPLQELETACY*LPVPLQ Trigger: CTGAAGTGGAACTGGTAAGCAATAACATGCAGTCTC...GAGTTCTTGGAGGGGAGGACTAGAAGGGACCCAGAAGTTAGCAAAGGGTCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR CCA 90 bp | TGTAATCTGAATTACAGAACCCAGAGAGATATGTGTGACTCTCATATGGTATGCTCAGCTTGGGGATGTTaGTGTGTGTTTGGGCTAGCT | + |
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Preference number: 4 (lower is better) Translates to: CNLNYRTQRDMCDSHMVCSAWGC*CVFGLA Trigger: AGCTAGCCCAAACACACACCAACATCCCCAAGCTGA...GCATACCATATGAGAGTCACACATATCTCTCTGGGTTCTGTAATTCAGATTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS-3UTR CCA 90 bp | TGTAATCTGAATTACAGAACCCAGAGAGATATGTGTGACTCTCATATGGTATGCTCTGGTCTCAGCAGCTaGTTGTTGAACAAATTTAGC | + |
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Preference number: 4 (lower is better) Translates to: CNLNYRTQRDMCDSHMVCSGLSS*LLNKFS Trigger: GCTAAATTTGTTCAACAACCAGCTGCTGAGACCAGA...GCATACCATATGAGAGTCACACATATCTCTCTGGGTTCTGTAATTCAGATTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS TCA 90 bp | TGTCCACAAGCCAGTTGTCGGCCCAGGGCGTGTTGCAATTGTGGGTaGGGGTCAGATACCGCATGCCCAGATGGTAGAGTGTCCGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: CPQASCRPRACCNCG*GSDTACPDGRVSAG Trigger: TCCTGCGGACACTCTACCATCTGGGCATGCGGTATCTGACCCTCACCCACAATTGCAACACGCCCTGGGCCGACAACTGGCTTGTGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS GCA 90 bp | GATACCGCATGCCCAGATGGTAGAGTGTCCGCAGGACACCAAGGCTaGTGTCAATTAAGTGGCCGCCTTCCACGCCGATCAGACTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: DTACPDGRVSAGHQG*CQLSGRLPRRSDWP Trigger: TGGCCAGTCTGATCGGCGTGGAAGGCGGCCACTTAATTGACAGCAGCCTTGGTGTCCTGCGGACACTCTACCATCTGGGCATGCGGTATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
||
| CDS-3UTR CAA 90 bp | GCCGTTCTCAGCATCTGCTCTCCAGAGGCTCAGAAGAATCTCCCAGGGCTGAGAGCGCCTGCCACCTTCTaGATGTGGTCCAGGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AVLSICSPEAQKNLPGLRAPATF*MWSRWS Trigger: TGACCACCTGGACCACATCAAGAAGGTGGCAGGCGC...TCTCAGCCCTGGGAGATTCTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
||
| CDS-3UTR CAA 90 bp | AGGGTGTGGTTCTGCACGGACAACAGGGACTCTGGGCTTGTCCAGTCTTCCCTGCAGGGCGTGTTGCAATaGTGGGTGAGGGTCAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: RVWFCTDNRDSGLVQSSLQGVLQ*WVRVRY Trigger: GTATCTGACCCTCACCCACAATTGCAACACGCCCTG...CAGGGAAGACTGGACAAGCCCAGAGTCCCTGTTGTCCGTGCAGAACCACACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
||
| CDS TCA 90 bp | GATGACCGGTGTGGTTCTCATGATAGCCACTGCCTGGTCCCGGAATaGGTCCGAAGCACAGATGGCCAGCAGAGACCAGAACCACCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: DDRCGSHDSHCLVPE*VRSTDGQQRPEPPD Trigger: ATCTGGTGGTTCTGGTCTCTGCTGGCCATCTGTGCTTCGGACTCATTCCGGGACCAGGCAGTGGCTATCATGAGAACCACACCGGTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS TCA 90 bp | GACACCCAAGCGGTTCATCTCGTTCAGCAGGCGCTTCCCAAAGGGTaGCAGTCCATGGCTCTCAGCCTCATCATCTCCTCTGTCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: DTQAVHLVQQALPKG*QSMALSLIISSVHK Trigger: CTTGTGGACAGAGGAGATGATGAGGCTGAGAGCCATGGACTGTCACCCTTTGGGAAGCGCCTGCTGAACGAGATGAACCGCTTGGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 |
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| CDS TCA 90 bp | AAGCGTCCTTCATGGTGGCCACAGACACGTGGGACAGGTCAATCATaGCACCCAAGCGGTTCATCTCGTTCAGCAGGCGCTTCCCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KRPSWWPQTRGTGQS*HPSGSSRSAGASQR Trigger: CCTTTGGGAAGCGCCTGCTGAACGAGATGAACCGCTTGGGTGTCATGATTGACCTGTCCCACGTGTCTGTGGCCACCATGAAGGACGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 |
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| CDS CCA 90 bp | CGGTTCATCTCGTTCAGCAGGCGCTTCCCAAAGGGTGACAGTCCATaGCTCTCAGCCTCATCATCTCCTCTGTCCACAAGCCAGTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RFISFSRRFPKGDSP*LSASSSPLSTSQLS Trigger: CGACAACTGGCTTGTGGACAGAGGAGATGATGAGGCTGAGAGCCATGGACTGTCACCCTTTGGGAAGCGCCTGCTGAACGAGATGAACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 |
||
| CDS CCA 90 bp | GCCCTGGAGATCTGCAAAGCGTCCTTCATGGTGGCCACAGACACGTaGGACAGGTCAATCATGACACCCAAGCGGTTCATCTCGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALEICKASFMVATDT*DRSIMTPKRFISFS Trigger: GCTGAACGAGATGAACCGCTTGGGTGTCATGATTGACCTGTCCCACGTGTCTGTGGCCACCATGAAGGACGCTTTGCAGATCTCCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 |
||
| CDS-3UTR CAA 90 bp | TGGTTCTGCACGGACAACAGGGACTCTGGGCTTGTCCAGTCTTCCCTGAGCTCATTCAGCTTGGGGATGTaGGTGTGTGTTTGGGCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: WFCTDNRDSGLVQSSLSSFSLGM*VCVWAS Trigger: GCTAGCCCAAACACACACCAACATCCCCAAGCTGAA...TGAGCTCAGGGAAGACTGGACAAGCCCAGAGTCCCTGTTGTCCGTGCAGAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
||
| CDS-3UTR CAA 90 bp | CAGGGCCGTTCTCAGCATCTGCTCTCCAGAGGCTCAGAAGAATCTCCCAGGGCTCCATCACCAGACTACTaGTGTTCTTCACCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QGRSQHLLSRGSEESPRAPSPDY*CSSPAA Trigger: TGCAGCTGGTGAAGAACACAAGTAGTCTGGTGATGG...AGCCCTGGGAGATTCTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
||
| CDS CCA 90 bp | CCTCCGACAAAGCCAGCCTTCAGCTTGGGGATGTTGGTGTGTGTTTaGGCTAGCTTGTTCAAGTCAGCATCTGGTCTCAGCAGCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPTKPAFSLGMLVCV*ASLFKSASGLSSWL Trigger: CAACCAGCTGCTGAGACCAGATGCTGACTTGAACAAGCTAGCCCAAACACACACCAACATCCCCAAGCTGAAGGCTGGCTTTGTCGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS-3UTR CAA 90 bp | CAGGGCCGTTCTCAGCATCTGCTCTCCAGAGGCTCAGAAGAATCTCCCAGGGCTTGTGTTTGGGCTAGCTaGTTCAAGTCAGCATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QGRSQHLLSRGSEESPRACVWAS*FKSASG Trigger: ACCAGATGCTGACTTGAACAAGCTAGCCCAAACACA...AGCCCTGGGAGATTCTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
||
| CDS CCA 90 bp | ACCAGAACTGGCCTCCGACAAAGCCAGCCTTCAGCTTGGGGATGTTaGTGTGTGTTTGGGCTAGCTTGTTCAAGTCAGCATCTGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TRTGLRQSQPSAWGC*CVFGLACSSQHLVS Trigger: TGAGACCAGATGCTGACTTGAACAAGCTAGCCCAAACACACACCAACATCCCCAAGCTGAAGGCTGGCTTTGTCGGAGGCCAGTTCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
||
| CDS CCA 90 bp | TGTATGCGGACCAGAACTGGCCTCCGACAAAGCCAGCCTTCAGCTTaGGGATGTTGGTGTGTGTTTGGGCTAGCTTGTTCAAGTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CMRTRTGLRQSQPSA*GCWCVFGLACSSQH Trigger: ATGCTGACTTGAACAAGCTAGCCCAAACACACACCAACATCCCCAAGCTGAAGGCTGGCTTTGTCGGAGGCCAGTTCTGGTCCGCATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS-3UTR CAA 90 bp | CAGGGCCGTTCTCAGCATCTGCTCTCCAGAGGCTCAGAAGAATCTCCCAGGGCTGGTCTCAGCAGCTGGTaGTTGAACAAATTTAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QGRSQHLLSRGSEESPRAGLSSW*LNKFSS Trigger: ACTGCTAAATTTGTTCAACAACCAGCTGCTGAGACC...AGCCCTGGGAGATTCTTCTGAGCCTCTGGAGAGCAGATGCTGAGAACGGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS GCA 90 bp | AGCTGGTTGTTGAACAAATTTAGCAGTTGCCAAGGCAAGTCGTTGTaGCCGTCGATGACCGGTGTGGTTCTCATGATAGCCACTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWLLNKFSSCQGKSL*PSMTGVVLMIATAW Trigger: CCAGGCAGTGGCTATCATGAGAACCACACCGGTCATCGACGGGCACAACGACTTGCCTTGGCAACTGCTAAATTTGTTCAACAACCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS GCA 90 bp | TATTCTCTTCACGGCATCTTTGTTTTGGGTGTCACAAGGCATGTATaGGGACCAGAACTGGCCTCCGACAAAGCCAGCCTTCAGCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: YSLHGIFVLGVTRHV*GPELASDKASLQLG Trigger: CCCAAGCTGAAGGCTGGCTTTGTCGGAGGCCAGTTCTGGTCCGCATACATGCCTTGTGACACCCAAAACAAAGATGCCGTGAAGAGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS TCA 90 bp | CCACTTGGGGCAAGGTGGCGCTGTCTGAACAGGACACAAAGTTGCTaGAGAAGTTCACCATCACCAGACTACTTGTGTTCTTCACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLGARWRCLNRTQSC*RSSPSPDYLCSSPA Trigger: AGCTGGTGAAGAACACAAGTAGTCTGGTGATGGTGAACTTCTTCAGCAACTTTGTGTCCTGTTCAGACAGCGCCACCTTGCCCCAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 |
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| CDS-3UTR CAA 90 bp | CTGCTGCTTATTCAGGAAAGGGTGTGGTTCTGCACGGACAACAGGGACTCTGGGAGGATGTCTGAACTATaGGTAACACACATGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLIQERVWFCTDNRDSGRMSEL*VTHMKV Trigger: GACCTTCATGTGTGTTACCAATAGTTCAGACATCCT...CCCAGAGTCCCTGTTGTCCGTGCAGAACCACACCCTTTCCTGAATAAGCAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
||
| CDS CCA 90 bp | ATCACATCCATCTGTTCCAGTATTCTCTTCACGGCATCTTTGTTTTaGGTGTCACAAGGCATGTATGCGGACCAGAACTGGCCTCCGACA | + |
|
Preference number: 5 (lower is better) Translates to: ITSICSSILFTASLF*VSQGMYADQNWPPT Trigger: TGTCGGAGGCCAGTTCTGGTCCGCATACATGCCTTGTGACACCCAAAACAAAGATGCCGTGAAGAGAATACTGGAACAGATGGATGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS CCA 90 bp | TGTGTTTGGGCTAGCTTGTTCAAGTCAGCATCTGGTCTCAGCAGCTaGTTGTTGAACAAATTTAGCAGTTGCCAAGGCAAGTCGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CVWASLFKSASGLSS*LLNKFSSCQGKSLC Trigger: GCACAACGACTTGCCTTGGCAACTGCTAAATTTGTTCAACAACCAGCTGCTGAGACCAGATGCTGACTTGAACAAGCTAGCCCAAACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
||
| CDS TCA 72 bp | GCCAGTTGTCGGCCCAGGGCGTGTTGCAATTGTGGGTaGGGGTCAGATACCGCATGCCCAGATGGTAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ASCRPRACCNCG*GSDTACPDGRV Trigger: CACTCTACCATCTGGGCATGCGGTATCTGACCCTCACCCACAATTGCAACACGCCCTGGGCCGACAACTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS GCA 72 bp | ATCATAATCTCCTCCAAGGCCCACAGCCCCAGCGCCTaGCACCTTCTTGATGTGGTCCAGGTGGTCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: IIISSKAHSPSA*HLLDVVQVVSH Trigger: GTGGCTGACCACCTGGACCACATCAAGAAGGTGGCAGGCGCTGGGGCTGTGGGCCTTGGAGGAGATTATGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
||
| CDS CAA 72 bp | TCCACAAGCCAGTTGTCGGCCCAGGGCGTGTTGCAATaGTGGGTGAGGGTCAGATACCGCATGCCCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: STSQLSAQGVLQ*WVRVRYRMPRW Trigger: CCATCTGGGCATGCGGTATCTGACCCTCACCCACAATTGCAACACGCCCTGGGCCGACAACTGGCTTGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS CAA 72 bp | CTCTCAGCCTCATCATCTCCTCTGTCCACAAGCCAGTaGTCGGCCCAGGGCGTGTTGCAATTGTGGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSASSSPLSTSQ*SAQGVLQLWVR Trigger: CCTCACCCACAATTGCAACACGCCCTGGGCCGACAACTGGCTTGTGGACAGAGGAGATGATGAGGCTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 |
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| CDS CAA 90 bp | AGTCCATGGCTCTCAGCCTCATCATCTCCTCTGTCCACAAGCCAGTaGTCGGCCCAGGGCGTGTTGCAATTGTGGGTGAGGGTCAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: SPWLSASSSPLSTSQ*SAQGVLQLWVRVRY Trigger: GTATCTGACCCTCACCCACAATTGCAACACGCCCTGGGCCGACAACTGGCTTGTGGACAGAGGAGATGATGAGGCTGAGAGCCATGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 |
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| CDS TCA 72 bp | GCGGTTCATCTCGTTCAGCAGGCGCTTCCCAAAGGGTaGCAGTCCATGGCTCTCAGCCTCATCATCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AVHLVQQALPKG*QSMALSLIISS Trigger: AGAGGAGATGATGAGGCTGAGAGCCATGGACTGTCACCCTTTGGGAAGCGCCTGCTGAACGAGATGAACCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 |
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| CDS TCA 72 bp | TCATGGTGGCCACAGACACGTGGGACAGGTCAATCATaGCACCCAAGCGGTTCATCTCGTTCAGCAGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SWWPQTRGTGQS*HPSGSSRSAGA Trigger: AGCGCCTGCTGAACGAGATGAACCGCTTGGGTGTCATGATTGACCTGTCCCACGTGTCTGTGGCCACCATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 |
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| CDS CCA 72 bp | TGTCAATTAAGTGGCCGCCTTCCACGCCGATCAGACTaGCCACTTTCCCCCTCCGGAAAGCCTGTAGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: CQLSGRLPRRSD*PLSPSGKPVGC Trigger: ACATCCTACAGGCTTTCCGGAGGGGGAAAGTGGCCAGTCTGATCGGCGTGGAAGGCGGCCACTTAATTGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS CAA 72 bp | CACCAGGGCTCCTGTCTGCAAGTGGATGCTGTGAGCTaGAGAGTAGCCATAGTATGTCCTGCAGGAGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: HQGSCLQVDAVS*RVAIVCPAGAV Trigger: GACGGCTCCTGCAGGACATACTATGGCTACTCTCAAGCTCACAGCATCCACTTGCAGACAGGAGCCCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS CAA 90 bp | GACCAGAACTGGCCTCCGACAAAGCCAGCCTTCAGCTTGGGGATGTaGGTGTGTGTTTGGGCTAGCTTGTTCAAGTCAGCATCTGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: DQNWPPTKPAFSLGM*VCVWASLFKSASGL Trigger: GAGACCAGATGCTGACTTGAACAAGCTAGCCCAAACACACACCAACATCCCCAAGCTGAAGGCTGGCTTTGTCGGAGGCCAGTTCTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS TCA 72 bp | CAGGTGGTCAGCCACTTGGGGCAAGGTGGCGCTGTCTaGACAGGACACAAAGTTGCTGAAGAAGTTCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: QVVSHLGQGGAV*TGHKVAEEVHH Trigger: ATGGTGAACTTCTTCAGCAACTTTGTGTCCTGTTCAGACAGCGCCACCTTGCCCCAAGTGGCTGACCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS GCA 72 bp | CACGGCATCTTTGTTTTGGGTGTCACAAGGCATGTATaGGGACCAGAACTGGCCTCCGACAAAGCCAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HGIFVLGVTRHV*GPELASDKASL Trigger: AAGGCTGGCTTTGTCGGAGGCCAGTTCTGGTCCGCATACATGCCTTGTGACACCCAAAACAAAGATGCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS CCA 72 bp | ACCAGAACTGGCCTCCGACAAAGCCAGCCTTCAGCTTaGGGATGTTGGTGTGTGTTTGGGCTAGCTTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TRTGLRQSQPSA*GCWCVFGLACS Trigger: TGAACAAGCTAGCCCAAACACACACCAACATCCCCAAGCTGAAGGCTGGCTTTGTCGGAGGCCAGTTCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS CCA 72 bp | ATCTGCAAAGCGTCCTTCATGGTGGCCACAGACACGTaGGACAGGTCAATCATGACACCCAAGCGGTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: ICKASFMVATDT*DRSIMTPKRFI Trigger: GATGAACCGCTTGGGTGTCATGATTGACCTGTCCCACGTGTCTGTGGCCACCATGAAGGACGCTTTGCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 |
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| CDS CAA 90 bp | ATGTATGCGGACCAGAACTGGCCTCCGACAAAGCCAGCCTTCAGCTaGGGGATGTTGGTGTGTGTTTGGGCTAGCTTGTTCAAGTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: MYADQNWPPTKPAFS*GMLVCVWASLFKSA Trigger: TGCTGACTTGAACAAGCTAGCCCAAACACACACCAACATCCCCAAGCTGAAGGCTGGCTTTGTCGGAGGCCAGTTCTGGTCCGCATACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS GCA 72 bp | GGTCTCAGCAGCTGGTTGTTGAACAAATTTAGCAGTTaGCAAGGCAAGTCGTTGTGCCCGTCGATGACCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GLSSWLLNKFSS*QGKSLCPSMTG Trigger: ACCGGTCATCGACGGGCACAACGACTTGCCTTGGCAACTGCTAAATTTGTTCAACAACCAGCTGCTGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS CCA 72 bp | AAGCCAGCCTTCAGCTTGGGGATGTTGGTGTGTGTTTaGGCTAGCTTGTTCAAGTCAGCATCTGGTCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KPAFSLGMLVCV*ASLFKSASGLS Trigger: GCTGAGACCAGATGCTGACTTGAACAAGCTAGCCCAAACACACACCAACATCCCCAAGCTGAAGGCTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS CAA 90 bp | AGCAGCTGGTTGTTGAACAAATTTAGCAGTTGCCAAGGCAAGTCGTaGTGCCCGTCGATGACCGGTGTGGTTCTCATGATAGCCACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSWLLNKFSSCQGKS*CPSMTGVVLMIATA Trigger: GGCAGTGGCTATCATGAGAACCACACCGGTCATCGACGGGCACAACGACTTGCCTTGGCAACTGCTAAATTTGTTCAACAACCAGCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS CAA 90 bp | TCAGCCACTTGGGGCAAGGTGGCGCTGTCTGAACAGGACACAAAGTaGCTGAAGAAGTTCACCATCACCAGACTACTTGTGTTCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: SATWGKVALSEQDTK*LKKFTITRLLVFFT Trigger: GGTGAAGAACACAAGTAGTCTGGTGATGGTGAACTTCTTCAGCAACTTTGTGTCCTGTTCAGACAGCGCCACCTTGCCCCAAGTGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS CAA 72 bp | TTCAGCTTGGGGATGTTGGTGTGTGTTTGGGCTAGCTaGTTCAAGTCAGCATCTGGTCTCAGCAGCTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSLGMLVCVWAS*FKSASGLSSWL Trigger: CAACCAGCTGCTGAGACCAGATGCTGACTTGAACAAGCTAGCCCAAACACACACCAACATCCCCAAGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
||
| CDS CAA 72 bp | TGGGGCAAGGTGGCGCTGTCTGAACAGGACACAAAGTaGCTGAAGAAGTTCACCATCACCAGACTACTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: WGKVALSEQDTK*LKKFTITRLLV Trigger: CACAAGTAGTCTGGTGATGGTGAACTTCTTCAGCAACTTTGTGTCCTGTTCAGACAGCGCCACCTTGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 |
||
| CDS CAA 90 bp | GTTTGGGCTAGCTTGTTCAAGTCAGCATCTGGTCTCAGCAGCTGGTaGTTGAACAAATTTAGCAGTTGCCAAGGCAAGTCGTTGTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VWASLFKSASGLSSW*LNKFSSCQGKSLCP Trigger: CGGGCACAACGACTTGCCTTGGCAACTGCTAAATTTGTTCAACAACCAGCTGCTGAGACCAGATGCTGACTTGAACAAGCTAGCCCAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS CAA 90 bp | TATCACATCCATCTGTTCCAGTATTCTCTTCACGGCATCTTTGTTTaGGGTGTCACAAGGCATGTATGCGGACCAGAACTGGCCTCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: YHIHLFQYSLHGIFV*GVTRHVCGPELASD Trigger: GTCGGAGGCCAGTTCTGGTCCGCATACATGCCTTGTGACACCCAAAACAAAGATGCCGTGAAGAGAATACTGGAACAGATGGATGTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS CAA 90 bp | CGGTGTATCACATCCATCTGTTCCAGTATTCTCTTCACGGCATCTTaGTTTTGGGTGTCACAAGGCATGTATGCGGACCAGAACTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RCITSICSSILFTAS*FWVSQGMYADQNWP Trigger: AGGCCAGTTCTGGTCCGCATACATGCCTTGTGACACCCAAAACAAAGATGCCGTGAAGAGAATACTGGAACAGATGGATGTGATACACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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| CDS CAA 90 bp | ATGTTATTGCTTACCAGTTCCACTTCAGAGAAGACCCGAATCAGGTaGTCAGCTAGCAAACCTCTGACCTCGGTCTCTGTCCAGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: MLLLTSSTSEKTRIR*SASKPLTSVSVQFL Trigger: GAGGAACTGGACAGAGACCGAGGTCAGAGGTTTGCTAGCTGACAACCTGATTCGGGTCTTCTCTGAAGTGGAACTGGTAAGCAATAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS TCA 72 bp | GCAAGGTGGCGCTGTCTGAACAGGACACAAAGTTGCTaGAGAAGTTCACCATCACCAGACTACTTGTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: ARWRCLNRTQSC*RSSPSPDYLCS Trigger: AGAACACAAGTAGTCTGGTGATGGTGAACTTCTTCAGCAACTTTGTGTCCTGTTCAGACAGCGCCACCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 |
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| CDS CAA 72 bp | AGGGTGATAGGGACTTCCTCAGGAGACTGCATGTTATaGCTTACCAGTTCCACTTCAGAGAAGACCCGAATC | + |
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Preference number: 6 (lower is better) Translates to: RVIGTSSGDCML*LTSSTSEKTRI Trigger: GATTCGGGTCTTCTCTGAAGTGGAACTGGTAAGCAATAACATGCAGTCTCCTGAGGAAGTCCCTATCACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS CAA 90 bp | AGCTCTTTCAGGGTGATAGGGACTTCCTCAGGAGACTGCATGTTATaGCTTACCAGTTCCACTTCAGAGAAGACCCGAATCAGGTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SSFRVIGTSSGDCML*LTSSTSEKTRIRLS Trigger: TGACAACCTGATTCGGGTCTTCTCTGAAGTGGAACTGGTAAGCAATAACATGCAGTCTCCTGAGGAAGTCCCTATCACCCTGAAAGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019422.6 |
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| CDS CAA 72 bp | CATCTGTTCCAGTATTCTCTTCACGGCATCTTTGTTTaGGGTGTCACAAGGCATGTATGCGGACCAGAACTG | + |
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Preference number: 6 (lower is better) Translates to: HLFQYSLHGIFV*GVTRHVCGPEL Trigger: CAGTTCTGGTCCGCATACATGCCTTGTGACACCCAAAACAAAGATGCCGTGAAGAGAATACTGGAACAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019422.6 ENSMUST00000212409.2 ENSMUST00000212773.2 |
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