Pregenerated sensors for DPAGT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032123Ensembl transcript IDs: ENSMUST00000054708.5, ENSMUST00000215050.2, ENSMUST00000215248.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCCTGGACCAGAGGGTCATCTCGGACCAGACAGAGGCTGGTCCTaGCTGAGGTCCAATGGAGACTGTGAGGTAAAGGGCAGCTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: RPGPEGHLGPDRGWS*LRSNGDCEVKGSCQ Trigger: CTGACAGCTGCCCTTTACCTCACAGTCTCCATTGGACCTCAGCCAGGACCAGCCTCTGTCTGGTCCGAGATGACCCTCTGGTCCAGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR TCA 90 bp | GTGAGGCAGCTGTGGGCAGCAGCAGCTTGTGGCGCCAGCGGAGATTaGGGACATCATCAGCAAACCCCAGGAAGATCATGCAGCAGATGG | + |
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Preference number: 1 (lower is better) Translates to: VRQLWAAAACGASGD*GHHQQTPGRSCSRW Trigger: CCATCTGCTGCATGATCTTCCTGGGGTTTGCTGATGATGTCCTCAATCTCCGCTGGCGCCACAAGCTGCTGCTGCCCACAGCTGCCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
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| 3UTR CCA 90 bp | ACCATGAGGAGAGGTAGTGAGGCAGCTGTGGGCAGCAGCAGCTTGTaGCGCCAGCGGAGATTGAGGACATCATCAGCAAACCCCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: TMRRGSEAAVGSSSL*RQRRLRTSSANPRK Trigger: CTTCCTGGGGTTTGCTGATGATGTCCTCAATCTCCGCTGGCGCCACAAGCTGCTGCTGCCCACAGCTGCCTCACTACCTCTCCTCATGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
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| 3UTR TCA 90 bp | CGGACCAGACAGAGGCTGGTCCTGGCTGAGGTCCAATGGAGACTGTaGGGTAAAGGGCAGCTGTCAGGGAGCTCAGACATCATAGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: RTRQRLVLAEVQWRL*GKGQLSGSSDIIEE Trigger: CTCTTCTATGATGTCTGAGCTCCCTGACAGCTGCCCTTTACCTCACAGTCTCCATTGGACCTCAGCCAGGACCAGCCTCTGTCTGGTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR CCA 90 bp | AGGGAGCTCAGACATCATAGAAGAGTCGGACGAGTTGGTAACGAATaGAGAAGGTGGCGGCGCTGCTTAGGACCTGCAGGAGCAGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: RELRHHRRVGRVGNE*RRWRRCLGPAGAAG Trigger: TCCTGCTGCTCCTGCAGGTCCTAAGCAGCGCCGCCACCTTCTCCATTCGTTACCAACTCGTCCGACTCTTCTATGATGTCTGAGCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR GCA 90 bp | GCCATTAATGCCCGCCAGGATGTTGATGGCATTGGTACAGAACACTaGAAGCAGCCCCATGTAGACGTAGTACAGGATCCCCAAGTCCAA | + |
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Preference number: 1 (lower is better) Translates to: AINARQDVDGIGTEH*KQPHVDVVQDPQVQ Trigger: TTGGACTTGGGGATCCTGTACTACGTCTACATGGGGCTGCTTGCAGTGTTCTGTACCAATGCCATCAACATCCTGGCGGGCATTAATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
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| 3UTR TCA 90 bp | TCCACCAGGTTGAAGACAATGATAGAAGCAGAGATGACTAGTGACTaGCCGGCCTCTAGGCCATTAATGCCCGCCAGGATGTTGATGGCA | + |
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Preference number: 1 (lower is better) Translates to: STRLKTMIEAEMTSD*PASRPLMPARMLMA Trigger: TGCCATCAACATCCTGGCGGGCATTAATGGCCTAGAGGCCGGTCAGTCACTAGTCATCTCTGCTTCTATCATTGTCTTCAACCTGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR TCA 90 bp | CTGAGCTACGAATATTTGCATAATAGAGGCTACAAGCCCACCTGGTaGGGCTGCAGATGGGACAGAAAGGGAGGGCAAGGCAAGATGAAA | + |
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Preference number: 1 (lower is better) Translates to: LSYEYLHNRGYKPTW*GCRWDRKGGQGKMK Trigger: TTTCATCTTGCCTTGCCCTCCCTTTCTGTCCCATCTGCAGCCTCACCAGGTGGGCTTGTAGCCTCTATTATGCAAATATTCGTAGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR TCA 90 bp | GCCTCTACGCTTCCCAATCACAACACTTCATTTGATAGTCAAATGTaGGGTCACCTTGGAGTATGTAGCCCTAACTCTAGCCCTAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: ASTLPNHNTSFDSQM*GHLGVCSPNSSPSP Trigger: TGGGCTAGGGCTAGAGTTAGGGCTACATACTCCAAGGTGACCTCACATTTGACTATCAAATGAAGTGTTGTGATTGGGAAGCGTAGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR TCA 90 bp | ATGTTGTTACACTCAGTGAAGGCACCGTCCTCACTCTCACCTTGGTaGACTGTCACTAACCGGAGGTTCTCTGCTACCTTTAAAATAAAG | + |
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Preference number: 1 (lower is better) Translates to: MLLHSVKAPSSLSPW*TVTNRRFSATFKIK Trigger: CTTTATTTTAAAGGTAGCAGAGAACCTCCGGTTAGTGACAGTTCACCAAGGTGAGAGTGAGGACGGTGCCTTCACTGAGTGTAACAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR CAA 90 bp | AGTGAGGCAGCTGTGGGCAGCAGCAGCTTGTGGCGCCAGCGGAGATaGAGGACATCATCAGCAAACCCCAGGAAGATCATGCAGCAGATG | + |
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Preference number: 2 (lower is better) Translates to: SEAAVGSSSLWRQRR*RTSSANPRKIMQQM Trigger: CATCTGCTGCATGATCTTCCTGGGGTTTGCTGATGATGTCCTCAATCTCCGCTGGCGCCACAAGCTGCTGCTGCCCACAGCTGCCTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
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| 3UTR-3UTR CCA 90 bp | GTCCCAAGATCCCCACCACGGCAAAAGTCATGCCCGCAAAGTAACAGAAGGTGTGGCAGCAGCAGCTTGTaGCGCCAGCGGAGATTGAGG | + |
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Preference number: 2 (lower is better) Translates to: VPRSPPRQKSCPQSNRRCGSSSL*RQRRLR Trigger: CCTCAATCTCCGCTGGCGCCACAAGCTGCTGCTGCC...ACACCTTCTGTTACTTTGCGGGCATGACTTTTGCCGTGGTGGGGATCTTGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR-3UTR TCA 90 bp | CCGGTGTTCACTCCTGAAGCACCACGAAGGTTAAAAAGGACAGAGGGAGGGGATTACAAGCCCACCTGGTaGGGCTGCAGATGGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: PVFTPEAPRRLKRTEGGDYKPTW*GCRWDR Trigger: TCTGTCCCATCTGCAGCCTCACCAGGTGGGCTTGTA...ATCCCCTCCCTCTGTCCTTTTTAACCTTCGTGGTGCTTCAGGAGTGAACACCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCCAAGATCCCCACCACGGCAAAAGTCATGCCCGCAAAGTAACAGAAGGTGTTACAAGCCCACCTGGTaGGGCTGCAGATGGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: VPRSPPRQKSCPQSNRRCYKPTW*GCRWDR Trigger: TCTGTCCCATCTGCAGCCTCACCAGGTGGGCTTGTA...ACACCTTCTGTTACTTTGCGGGCATGACTTTTGCCGTGGTGGGGATCTTGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAGACGTAGTACAGGATCCCCAAGTCCAAATGCAGGCCCAGAATCCAGCGGAGGCGCCAGCGGAGATTaGGGACATCATCAGCAAACC | + |
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Preference number: 2 (lower is better) Translates to: CRRSTGSPSPNAGPESSGGASGD*GHHQQT Trigger: GGTTTGCTGATGATGTCCTCAATCTCCGCTGGCGCC...TCCGCTGGATTCTGGGCCTGCATTTGGACTTGGGGATCCTGTACTACGTCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAATCCAGCGGAAGGGCTTGGGCACCACGATGGTTGTATTGCCAAAGTTTGTAGTGTCAGCGAGGCCTaGACCAGAGGGTCATCTCGG | + |
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Preference number: 2 (lower is better) Translates to: QNPAEGLGHHDGCIAKVCSVSEA*TRGSSR Trigger: CCGAGATGACCCTCTGGTCCAGGCCTCGCTGACACT...ACAAACTTTGGCAATACAACCATCGTGGTGCCCAAGCCCTTCCGCTGGATTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR-3UTR CCA 90 bp | GCGGAAGGGCTTGGGCACCACGATGGTTGTATTGCCAAAGTTTGTGAAGTAGACGTAGTGAGGCAGCTGTaGGCAGCAGCAGCTTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: AEGLGHHDGCIAKVCEVDVVRQL*AAAACG Trigger: GCCACAAGCTGCTGCTGCCCACAGCTGCCTCACTAC...GTCTACTTCACAAACTTTGGCAATACAACCATCGTGGTGCCCAAGCCCTTCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCAGCGGAAGGGCTTGGGCACCACGATGGTTGTATTGCCAAAGTTTGTGAAGGTAGTGAGGCAGCTGTaGGCAGCAGCAGCTTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: IQRKGLGTTMVVLPKFVKVVRQL*AAAACG Trigger: GCCACAAGCTGCTGCTGCCCACAGCTGCCTCACTAC...CTTCACAAACTTTGGCAATACAACCATCGTGGTGCCCAAGCCCTTCCGCTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGCAGCCCCATGTAGACGTAGTACAGGATCCCCAAGTCCAAATGCAGGCCTCCAGCGGAAGGGCTTaGGCACCACGATGGTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: CKQPHVDVVQDPQVQMQASSGRA*APRWLY Trigger: ATACAACCATCGTGGTGCCCAAGCCCTTCCGCTGGA...GGCCTGCATTTGGACTTGGGGATCCTGTACTACGTCTACATGGGGCTGCTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGCACCACGAAGGTTAAAAAGGACAGAGGGAGGGGATGCTACACTAGAGGAAGGCGCCAGCGGAGATTaGGGACATCATCAGCAAACC | + |
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Preference number: 2 (lower is better) Translates to: EAPRRLKRTEGGDATLEEGASGD*GHHQQT Trigger: GGTTTGCTGATGATGTCCTCAATCTCCGCTGGCGCC...TTCCTCTAGTGTAGCATCCCCTCCCTCTGTCCTTTTTAACCTTCGTGGTGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGAAGCACCACGAAGGTTAAAAAGGACAGAGGGAGGGGATGCTACACTAGAGCTGAGCACATGGCCCTaGCTCTACGCTTCCCAATCA | + |
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Preference number: 2 (lower is better) Translates to: PEAPRRLKRTEGGDATLELSTWP*LYASQS Trigger: TGATTGGGAAGCGTAGAGGCAGGGCCATGTGCTCAG...CTCTAGTGTAGCATCCCCTCCCTCTGTCCTTTTTAACCTTCGTGGTGCTTCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATTGTCACCGTTCTGAGCACATGGCCCTGCCTCTACGCTTCCCAATCACAAACCGTTCTGAGCACATaGCCCTGCCTCTACGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: FIVTVLSTWPCLYASQSQTVLST*PCLYAS Trigger: GGAAGCGTAGAGGCAGGGCCATGTGCTCAGAACGGT...TTGTGATTGGGAAGCGTAGAGGCAGGGCCATGTGCTCAGAACGGTGACAATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGCACCACGAAGGTTAAAAAGGACAGAGGGAGGGGATGCTACACTAGAGGAACTGAGCACATGGCCCTaGCTCTACGCTTCCCAATCA | + |
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Preference number: 2 (lower is better) Translates to: EAPRRLKRTEGGDATLEELSTWP*LYASQS Trigger: TGATTGGGAAGCGTAGAGGCAGGGCCATGTGCTCAG...TTCCTCTAGTGTAGCATCCCCTCCCTCTGTCCTTTTTAACCTTCGTGGTGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR-3UTR CCA 90 bp | CATTGGTACAGAACACTGCAAGCAGCCCCATGTAGACGTAGTACAGGATCCCCAGCTTGGGCACCACGATaGTTGTATTGCCAAAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: HWYRTLQAAPCRRSTGSPAWAPR*LYCQSL Trigger: CAAACTTTGGCAATACAACCATCGTGGTGCCCAAGC...TGGGGATCCTGTACTACGTCTACATGGGGCTGCTTGCAGTGTTCTGTACCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
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| 3UTR CAA 90 bp | GAGCACATGGCCCTGCCTCTACGCTTCCCAATCACAACACTTCATTaGATAGTCAAATGTGAGGTCACCTTGGAGTATGTAGCCCTAACT | + |
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Preference number: 2 (lower is better) Translates to: EHMALPLRFPITTLH*IVKCEVTLEYVALT Trigger: AGTTAGGGCTACATACTCCAAGGTGACCTCACATTTGACTATCAAATGAAGTGTTGTGATTGGGAAGCGTAGAGGCAGGGCCATGTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR CAA 90 bp | GTGAGGTTTCTCTCATGTATAGGCCCAAAGACTTTAAGTAGCAAGTaGATGAGGGTCATGTTGTTACACTCAGTGAAGGCACCGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: VRFLSCIGPKTLSSK*MRVMLLHSVKAPSS Trigger: TGAGGACGGTGCCTTCACTGAGTGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCTTTGGGCCTATACATGAGAGAAACCTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAATATACCAGACTTGGCATATAGTTCAGTGGTAGAGCAGTTAAGTATAAGGAGTGTCAGCGAGGCCTaGACCAGAGGGTCATCTCGG | + |
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Preference number: 2 (lower is better) Translates to: INIPDLAYSSVVEQLSIRSVSEA*TRGSSR Trigger: CCGAGATGACCCTCTGGTCCAGGCCTCGCTGACACT...CCTTATACTTAACTGCTCTACCACTGAACTATATGCCAAGTCTGGTATATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR-3UTR CCA 90 bp | GATATCAGTAGTCACAGATGGCAGAAGCTGAGAACAAAAGTGTCAGCGAGGCCTATCAGTAGTCACAGATaGCAGAAGCTGAGAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: DISSHRWQKLRTKVSARPISSHR*QKLRTK Trigger: TTTTGTTCTCAGCTTCTGCCATCTGTGACTACTGAT...AGGCCTCGCTGACACTTTTGTTCTCAGCTTCTGCCATCTGTGACTACTGATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR-3UTR GCA 90 bp | ATAAATATACCAGACTTGGCATATAGTTCAGTGGTAGAGCAGTTAAGTATAAGGATTGGTACAGAACACTaGAAGCAGCCCCATGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: INIPDLAYSSVVEQLSIRIGTEH*KQPHVD Trigger: GTCTACATGGGGCTGCTTGCAGTGTTCTGTACCAAT...CCTTATACTTAACTGCTCTACCACTGAACTATATGCCAAGTCTGGTATATTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR-3UTR CCA 90 bp | TGTATAGGCCCAAAGACTTTAAGTAGCAAGTTGATGAGGGTCATGTTGTTACACATCAGTAGTCACAGATaGCAGAAGCTGAGAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: CIGPKTLSSKLMRVMLLHISSHR*QKLRTK Trigger: TTTTGTTCTCAGCTTCTGCCATCTGTGACTACTGAT...GTGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCTTTGGGCCTATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR CCA 72 bp | CCTGGACCAGAGGGTCATCTCGGACCAGACAGAGGCTaGTCCTGGCTGAGGTCCAATGGAGACTGTGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: PGPEGHLGPDRG*SWLRSNGDCEV Trigger: TACCTCACAGTCTCCATTGGACCTCAGCCAGGACCAGCCTCTGTCTGGTCCGAGATGACCCTCTGGTCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGAAGCACCACGAAGGTTAAAAAGGACAGAGGGAGGGGATGCTACACTAGAGGTGGGCAGCAGCAGCTaGTGGCGCCAGCGGAGATTG | + |
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Preference number: 3 (lower is better) Translates to: PEAPRRLKRTEGGDATLEVGSSS*WRQRRL Trigger: CAATCTCCGCTGGCGCCACAAGCTGCTGCTGCCCAC...CTCTAGTGTAGCATCCCCTCCCTCTGTCCTTTTTAACCTTCGTGGTGCTTCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR TCA 72 bp | CTGTGGGCAGCAGCAGCTTGTGGCGCCAGCGGAGATTaGGGACATCATCAGCAAACCCCAGGAAGATCATGC | + |
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Preference number: 3 (lower is better) Translates to: LWAAAACGASGD*GHHQQTPGRSC Trigger: GCATGATCTTCCTGGGGTTTGCTGATGATGTCCTCAATCTCCGCTGGCGCCACAAGCTGCTGCTGCCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
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| 3UTR TCA 72 bp | CAGAGGCTGGTCCTGGCTGAGGTCCAATGGAGACTGTaGGGTAAAGGGCAGCTGTCAGGGAGCTCAGACATC | + |
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Preference number: 3 (lower is better) Translates to: QRLVLAEVQWRL*GKGQLSGSSDI Trigger: GATGTCTGAGCTCCCTGACAGCTGCCCTTTACCTCACAGTCTCCATTGGACCTCAGCCAGGACCAGCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR CCA 72 bp | AGAGGTAGTGAGGCAGCTGTGGGCAGCAGCAGCTTGTaGCGCCAGCGGAGATTGAGGACATCATCAGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: RGSEAAVGSSSL*RQRRLRTSSAN Trigger: GTTTGCTGATGATGTCCTCAATCTCCGCTGGCGCCACAAGCTGCTGCTGCCCACAGCTGCCTCACTACCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
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| 3UTR CCA 72 bp | ATGGCAGAAGCTGAGAACAAAAGTGTCAGCGAGGCCTaGACCAGAGGGTCATCTCGGACCAGACAGAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: MAEAENKSVSEA*TRGSSRTRQRL Trigger: CAGCCTCTGTCTGGTCCGAGATGACCCTCTGGTCCAGGCCTCGCTGACACTTTTGTTCTCAGCTTCTGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCACCTGGTGAGGCTGCAGATGGGACAGAAAGGGAGGGCAAGGCAAGATGAAGAAGAGTCGGACGAGTaGGTAACGAATGGAGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: AHLVRLQMGQKGRARQDEEESDE*VTNGEG Trigger: ACCTTCTCCATTCGTTACCAACTCGTCCGACTCTTC...TTCATCTTGCCTTGCCCTCCCTTTCTGTCCCATCTGCAGCCTCACCAGGTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR GCA 72 bp | GCCCGCCAGGATGTTGATGGCATTGGTACAGAACACTaGAAGCAGCCCCATGTAGACGTAGTACAGGATCCC | + |
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Preference number: 3 (lower is better) Translates to: ARQDVDGIGTEH*KQPHVDVVQDP Trigger: GGGATCCTGTACTACGTCTACATGGGGCTGCTTGCAGTGTTCTGTACCAATGCCATCAACATCCTGGCGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCATGTAGACGTAGTACAGGATCCCCAAGTCCAAATGCAGGCCCAGAATCCATGGCGCCAGCGGAGATaGAGGACATCATCAGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: PHVDVVQDPQVQMQAQNPWRQRR*RTSSAN Trigger: GTTTGCTGATGATGTCCTCAATCTCCGCTGGCGCCA...TGGATTCTGGGCCTGCATTTGGACTTGGGGATCCTGTACTACGTCTACATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
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| 3UTR CCA 72 bp | AGACATCATAGAAGAGTCGGACGAGTTGGTAACGAATaGAGAAGGTGGCGGCGCTGCTTAGGACCTGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: RHHRRVGRVGNE*RRWRRCLGPAG Trigger: TCCTGCAGGTCCTAAGCAGCGCCGCCACCTTCTCCATTCGTTACCAACTCGTCCGACTCTTCTATGATGTCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR TCA 72 bp | CCATCCAGGATATCAGTAGTCACAGATGGCAGAAGCTaGGAACAAAAGTGTCAGCGAGGCCTGGACCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: PSRISVVTDGRS*EQKCQRGLDQR Trigger: CCTCTGGTCCAGGCCTCGCTGACACTTTTGTTCTCAGCTTCTGCCATCTGTGACTACTGATATCCTGGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR TCA 72 bp | GAATATTTGCATAATAGAGGCTACAAGCCCACCTGGTaGGGCTGCAGATGGGACAGAAAGGGAGGGCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: EYLHNRGYKPTW*GCRWDRKGGQG Trigger: GCCTTGCCCTCCCTTTCTGTCCCATCTGCAGCCTCACCAGGTGGGCTTGTAGCCTCTATTATGCAAATATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR TCA 72 bp | CACTCAGTGAAGGCACCGTCCTCACTCTCACCTTGGTaGACTGTCACTAACCGGAGGTTCTCTGCTACCTTT | + |
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Preference number: 3 (lower is better) Translates to: HSVKAPSSLSPW*TVTNRRFSATF Trigger: AAAGGTAGCAGAGAACCTCCGGTTAGTGACAGTTCACCAAGGTGAGAGTGAGGACGGTGCCTTCACTGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR TCA 72 bp | TTGAAGACAATGATAGAAGCAGAGATGACTAGTGACTaGCCGGCCTCTAGGCCATTAATGCCCGCCAGGATG | + |
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Preference number: 3 (lower is better) Translates to: LKTMIEAEMTSD*PASRPLMPARM Trigger: CATCCTGGCGGGCATTAATGGCCTAGAGGCCGGTCAGTCACTAGTCATCTCTGCTTCTATCATTGTCTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| 3UTR CCA 72 bp | AGCAAGGTGTCCATCCAGGATATCAGTAGTCACAGATaGCAGAAGCTGAGAACAAAAGTGTCAGCGAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: SKVSIQDISSHR*QKLRTKVSARP Trigger: AGGCCTCGCTGACACTTTTGTTCTCAGCTTCTGCCATCTGTGACTACTGATATCCTGGATGGACACCTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| 3UTR-3UTR CAA 90 bp | TTTATTGTCACCGTTCTGAGCACATGGCCCTGCCTCTACGCTTCCCAATCACAATCCAGTTCCACCAGGTaGAAGACAATGATAGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: FIVTVLSTWPCLYASQSQSSSTR*KTMIEA Trigger: TGCTTCTATCATTGTCTTCAACCTGGTGGAACTGGA...TTGTGATTGGGAAGCGTAGAGGCAGGGCCATGTGCTCAGAACGGTGACAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTGTCACCGTTCTGAGCACATGGCCCTGCCTCTACGCTTCCCAATCACAAATCACAACACTTCATTaGATAGTCAAATGTGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: FIVTVLSTWPCLYASQSQITTLH*IVKCEV Trigger: GACCTCACATTTGACTATCAAATGAAGTGTTGTGAT...TTGTGATTGGGAAGCGTAGAGGCAGGGCCATGTGCTCAGAACGGTGACAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
||
| 3UTR TCA 72 bp | CTTCCCAATCACAACACTTCATTTGATAGTCAAATGTaGGGTCACCTTGGAGTATGTAGCCCTAACTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LPNHNTSFDSQM*GHLGVCSPNSS Trigger: GCTAGAGTTAGGGCTACATACTCCAAGGTGACCTCACATTTGACTATCAAATGAAGTGTTGTGATTGGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
||
| CDS-3UTR CCA 90 bp | GGTAGTGAGGCAGCTGTGGGCAGCAGCAGCTTGTGGCGCCAGCGGAGATTGAGGAGCTTGTTGAGGTCCTaGCCACAGAGGCGCGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GSEAAVGSSSLWRQRRLRSLLRS*PQRRAA Trigger: CGCCGCGCGCCTCTGTGGCCAGGACCTCAACAAGCT...CCTCAATCTCCGCTGGCGCCACAAGCTGCTGCTGCCCACAGCTGCCTCACTACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
||
| CDS-3UTR CCA 90 bp | GTACAGGATCCCCAAGTCCAAATGCAGGCCCAGAATCCAGCGGAAGGGCTTGGGAGCTTGTTGAGGTCCTaGCCACAGAGGCGCGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VQDPQVQMQAQNPAEGLGSLLRS*PQRRAA Trigger: CGCCGCGCGCCTCTGTGGCCAGGACCTCAACAAGCT...CCCAAGCCCTTCCGCTGGATTCTGGGCCTGCATTTGGACTTGGGGATCCTGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
||
| CDS-3UTR CCA 90 bp | GCTGAGAACAAAAGTGTCAGCGAGGCCTGGACCAGAGGGTCATCTCGGACCAGAAGCTTGTTGAGGTCCTaGCCACAGAGGCGCGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AENKSVSEAWTRGSSRTRSLLRS*PQRRAA Trigger: CGCCGCGCGCCTCTGTGGCCAGGACCTCAACAAGCT...TCTGGTCCGAGATGACCCTCTGGTCCAGGCCTCGCTGACACTTTTGTTCTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCAGCGAGGCCTGGACCAGAGGGTCATCTCGGACCAGACAGAGGCTGGTCACTCCCTGGGACTCTaGGATCTGCTGCTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KCQRGLDQRVISDQTEAGHSLGL*DLLLAE Trigger: CTCAGCCAGCAGCAGATCCCAGAGTCCCAGGGAGTG...ACCAGCCTCTGTCTGGTCCGAGATGACCCTCTGGTCCAGGCCTCGCTGACACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAGCTTGTGGCGCCAGCGGAGATTGAGGACATCATCAGCAAACCCCAGGCCGCTGATCACTCCCTaGGACTCTGGGATCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLWRQRRLRTSSANPRPLITP*DSGICC Trigger: GCAGCAGATCCCAGAGTCCCAGGGAGTGATCAGCGG...CCTGGGGTTTGCTGATGATGTCCTCAATCTCCGCTGGCGCCACAAGCTGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
||
| 3UTR CAA 72 bp | AGGAGAGGTAGTGAGGCAGCTGTGGGCAGCAGCAGCTaGTGGCGCCAGCGGAGATTGAGGACATCATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRGSEAAVGSSS*WRQRRLRTSSA Trigger: TGCTGATGATGTCCTCAATCTCCGCTGGCGCCACAAGCTGCTGCTGCCCACAGCTGCCTCACTACCTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
||
| CDS-3UTR GCA 90 bp | ACCATGAGGAGAGGTAGTGAGGCAGCTGTGGGCAGCAGCAGCTTGTGGCGCCAGGGCCACAAAATCTGCTaGTGGCTGAGCTTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TMRRGSEAAVGSSSLWRQGHKIC*WLSLLR Trigger: CCTCAACAAGCTCAGCCAGCAGCAGATTTTGTGGCC...CTGGCGCCACAAGCTGCTGCTGCCCACAGCTGCCTCACTACCTCTCCTCATGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCCCAGAATCCAGCGGAAGGGCTTGGGCACCACGATGGTTGTATTGCCAAACACTCCCTGGGACTCTaGGATCTGCTGCTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QAQNPAEGLGHHDGCIAKHSLGL*DLLLAE Trigger: CTCAGCCAGCAGCAGATCCCAGAGTCCCAGGGAGTG...TTTGGCAATACAACCATCGTGGTGCCCAAGCCCTTCCGCTGGATTCTGGGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
||
| 3UTR CAA 72 bp | GCTGTGGGCAGCAGCAGCTTGTGGCGCCAGCGGAGATaGAGGACATCATCAGCAAACCCCAGGAAGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: AVGSSSLWRQRR*RTSSANPRKIM Trigger: CATGATCTTCCTGGGGTTTGCTGATGATGTCCTCAATCTCCGCTGGCGCCACAAGCTGCTGCTGCCCACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGGCTGCAGATGGGACAGAAAGGGAGGGCAAGGCAAGATGAAAGCCCTAGGGCAGCATGGTCTTGCTaGAGTGTCCCAAGATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRLQMGQKGRARQDESPRAAWSC*SVPRSP Trigger: TGGGGATCTTGGGACACTTCAGCAAGACCATGCTGC...CCTAGGGCTTTCATCTTGCCTTGCCCTCCCTTTCTGTCCCATCTGCAGCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR TCA 90 bp | GTGAGGCTGCAGATGGGACAGAAAGGGAGGGCAAGGCAAGATGAAAGCCCTAGGGAGATGACTAGTGACTaGCCGGCCTCTAGGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: VRLQMGQKGRARQDESPREMTSD*PASRPL Trigger: TAATGGCCTAGAGGCCGGTCAGTCACTAGTCATCTC...CCTAGGGCTTTCATCTTGCCTTGCCCTCCCTTTCTGTCCCATCTGCAGCCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR GCA 90 bp | TGGCAGAAGCTGAGAACAAAAGTGTCAGCGAGGCCTGGACCAGAGGGTCATCTCTGGGACTCTGGGATCTaGTGCTGGCTGAGCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WQKLRTKVSARPGPEGHLWDSGI*CWLSLL Trigger: CAACAAGCTCAGCCAGCAGCAGATCCCAGAGTCCCA...GAGATGACCCTCTGGTCCAGGCCTCGCTGACACTTTTGTTCTCAGCTTCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGGAAGATCATGCAGCAGATGGCAAGGAGGGCACCTATTAGGGCCACAATGGGACTCTGGGATCTaGTGCTGGCTGAGCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPGRSCSRWQGGHLLGPQWDSGI*CWLSLL Trigger: CAACAAGCTCAGCCAGCAGCAGATCCCAGAGTCCCA...TTGTGGCCCTAATAGGTGCCCTCCTTGCCATCTGCTGCATGATCTTCCTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGGCTGCAGATGGGACAGAAAGGGAGGGCAAGGCAAGATGAAAGCCCTAGGGGGAATGCCTTACACTaGTCCTCCACGAAGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VRLQMGQKGRARQDESPRGNALH*SSTKQF Trigger: GAACTGCTTCGTGGAGGAGCAGTGTAAGGCATTCCC...CCTAGGGCTTTCATCTTGCCTTGCCCTCCCTTTCTGTCCCATCTGCAGCCTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR GCA 90 bp | AGCACCACGAAGGTTAAAAAGGACAGAGGGAGGGGATGCTACACTAGAGGAACAGCGCTGCTTAGGACCTaGAGGAGCAGCAGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: STTKVKKDRGRGCYTRGTALLRT*RSSRSR Trigger: CCTGCTCCTGCTGCTCCTGCAGGTCCTAAGCAGCGC...TGTTCCTCTAGTGTAGCATCCCCTCCCTCTGTCCTTTTTAACCTTCGTGGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR CCA 90 bp | ACCCCAGGAAGATCATGCAGCAGATGGCAAGGAGGGCACCTATTAGGGCCACAATCTGGGATCTGCTGCTaGCTGAGCTTGTTGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPGRSCSRWQGGHLLGPQSGICC*LSLLRS Trigger: GGACCTCAACAAGCTCAGCCAGCAGCAGATCCCAGA...TTGTGGCCCTAATAGGTGCCCTCCTTGCCATCTGCTGCATGATCTTCCTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAAGCACCACGAAGGTTAAAAAGGACAGAGGGAGGGGATGCTACACTAGAGCCGCTGATCACTCCCTaGGACTCTGGGATCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PEAPRRLKRTEGGDATLEPLITP*DSGICC Trigger: GCAGCAGATCCCAGAGTCCCAGGGAGTGATCAGCGG...CTCTAGTGTAGCATCCCCTCCCTCTGTCCTTTTTAACCTTCGTGGTGCTTCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR CCA 90 bp | AGCACCACGAAGGTTAAAAAGGACAGAGGGAGGGGATGCTACACTAGAGGAACAGGCAGCAGCAGCTTGTaGCGCCAGCGGAGATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: STTKVKKDRGRGCYTRGTGSSSL*RQRRLR Trigger: CCTCAATCTCCGCTGGCGCCACAAGCTGCTGCTGCC...TGTTCCTCTAGTGTAGCATCCCCTCCCTCTGTCCTTTTTAACCTTCGTGGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR TCA 90 bp | TATGTAGCCCTAACTCTAGCCCTAGCCCAGGTTCTCTCTCAAGGCTCAGGTGAAGGAAAACAGCACCGCTaGTCACTCCCTGGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YVALTLALAQVLSQGSGEGKQHR*SLPGTL Trigger: CAGAGTCCCAGGGAGTGATCAGCGGTGCTGTTTTCC...TTCACCTGAGCCTTGAGAGAGAACCTGGGCTAGGGCTAGAGTTAGGGCTACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR TCA 90 bp | ATCCAGCGGAAGGGCTTGGGCACCACGATGGTTGTATTGCCAAAGTTTGTGAAGGGAAAACAGCACCGCTaGTCACTCCCTGGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQRKGLGTTMVVLPKFVKGKQHR*SLPGTL Trigger: CAGAGTCCCAGGGAGTGATCAGCGGTGCTGTTTTCC...CTTCACAAACTTTGGCAATACAACCATCGTGGTGCCCAAGCCCTTCCGCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTGGCGCCAGCGGAGATTGAGGACATCATCAGCAAACCCCAGGAAGATCATGACTCTGGGATCTGCTaGTGGCTGAGCTTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVAPAEIEDIISKPQEDHDSGIC*WLSLLR Trigger: CCTCAACAAGCTCAGCCAGCAGCAGATCCCAGAGTC...ATGATCTTCCTGGGGTTTGCTGATGATGTCCTCAATCTCCGCTGGCGCCACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
||
| CDS-3UTR GCA 90 bp | GAACAAAAGTGTCAGCGAGGCCTGGACCAGAGGGTCATCTCGGACCAGACAGAGCCACGGCAAAAGTCATaGCCGCAAAGTAACAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQKCQRGLDQRVISDQTEPRQKS*PQSNRR Trigger: CCTTCTGTTACTTTGCGGGCATGACTTTTGCCGTGG...CTCTGTCTGGTCCGAGATGACCCTCTGGTCCAGGCCTCGCTGACACTTTTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR CCA 90 bp | GTGAGGCTGCAGATGGGACAGAAAGGGAGGGCAAGGCAAGATGAAAGCCCTAGGAGGGCCACAAATTCATaGTGGGGGAATGCCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: VRLQMGQKGRARQDESPRRATNS*WGNALH Trigger: GTGTAAGGCATTCCCCCACCATGAATTTGTGGCCCT...CCTAGGGCTTTCATCTTGCCTTGCCCTCCCTTTCTGTCCCATCTGCAGCCTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR CCA 90 bp | GCCCACCTGGTGAGGCTGCAGATGGGACAGAAAGGGAGGGCAAGGCAAGATGAAGCTTGGGCACCACGATaGTTGTATTGCCAAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AHLVRLQMGQKGRARQDEAWAPR*LYCQSL Trigger: CAAACTTTGGCAATACAACCATCGTGGTGCCCAAGC...TTCATCTTGCCTTGCCCTCCCTTTCTGTCCCATCTGCAGCCTCACCAGGTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR CCA 90 bp | TATGTAGCCCTAACTCTAGCCCTAGCCCAGGTTCTCTCTCAAGGCTCAGGTGAATCTGGGATCTGCTGCTaGCTGAGCTTGTTGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YVALTLALAQVLSQGSGESGICC*LSLLRS Trigger: GGACCTCAACAAGCTCAGCCAGCAGCAGATCCCAGA...TTCACCTGAGCCTTGAGAGAGAACCTGGGCTAGGGCTAGAGTTAGGGCTACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR CCA 90 bp | AGGACAGAGGGAGGGGATGCTACACTAGAGGAACAAGTAAAAGGCAGTCCTTTAGTAGTGAGGCAGCTGTaGGCAGCAGCAGCTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTEGGDATLEEQVKGSPLVVRQL*AAAACG Trigger: GCCACAAGCTGCTGCTGCCCACAGCTGCCTCACTAC...TAAAGGACTGCCTTTTACTTGTTCCTCTAGTGTAGCATCCCCTCCCTCTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| 3UTR CAA 72 bp | AAGTCCAAATGCAGGCCCAGAATCCAGCGGAAGGGCTaGGGCACCACGATGGTTGTATTGCCAAAGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSKCRPRIQRKG*GTTMVVLPKFV Trigger: CACAAACTTTGGCAATACAACCATCGTGGTGCCCAAGCCCTTCCGCTGGATTCTGGGCCTGCATTTGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
||
| CDS-3UTR TCA 90 bp | TATGTAGCCCTAACTCTAGCCCTAGCCCAGGTTCTCTCTCAAGGCTCAGGTGAATGCCCGCCAGGATGTTaGTGGCATTGGTACAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: YVALTLALAQVLSQGSGECPPGC*WHWYRT Trigger: TGTTCTGTACCAATGCCATCAACATCCTGGCGGGCA...TTCACCTGAGCCTTGAGAGAGAACCTGGGCTAGGGCTAGAGTTAGGGCTACATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR GCA 90 bp | AGCACCACGAAGGTTAAAAAGGACAGAGGGAGGGGATGCTACACTAGAGGAACAGACTCTGGGATCTGCTaGTGGCTGAGCTTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: STTKVKKDRGRGCYTRGTDSGIC*WLSLLR Trigger: CCTCAACAAGCTCAGCCAGCAGCAGATCCCAGAGTC...TGTTCCTCTAGTGTAGCATCCCCTCCCTCTGTCCTTTTTAACCTTCGTGGTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR GCA 90 bp | GAAGCACCACGAAGGTTAAAAAGGACAGAGGGAGGGGATGCTACACTAGAGGAAATCCCCAAGTCCAAATaGAGGCCCAGAATCCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EAPRRLKRTEGGDATLEEIPKSK*RPRIQR Trigger: CCGCTGGATTCTGGGCCTGCATTTGGACTTGGGGAT...TTCCTCTAGTGTAGCATCCCCTCCCTCTGTCCTTTTTAACCTTCGTGGTGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR GCA 90 bp | AACCCCAGGAAGATCATGCAGCAGATGGCAAGGAGGGCACCTATTAGGGCCACATGGATCACAGCACTGTaGCAACGCTTTCCAAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: NPRKIMQQMARRAPIRATWITAL*QRFPNR Trigger: TCTATTTGGAAAGCGTTGGCACAGTGCTGTGATCCA...TGTGGCCCTAATAGGTGCCCTCCTTGCCATCTGCTGCATGATCTTCCTGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
||
| CDS-3UTR CCA 90 bp | CCTGAAGCACCACGAAGGTTAAAAAGGACAGAGGGAGGGGATGCTACACTAGAGGCCACAAATTCATGGTaGGGGAATGCCTTACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PEAPRRLKRTEGGDATLEATNSW*GNALHC Trigger: GCAGTGTAAGGCATTCCCCCACCATGAATTTGTGGC...CTCTAGTGTAGCATCCCCTCCCTCTGTCCTTTTTAACCTTCGTGGTGCTTCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR CCA 90 bp | GATATCAGTAGTCACAGATGGCAGAAGCTGAGAACAAAAGTGTCAGCGAGGCCTTCCAGCGGAAGGGCTTaGGCACCACGATGGTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: DISSHRWQKLRTKVSARPSSGRA*APRWLY Trigger: ATACAACCATCGTGGTGCCCAAGCCCTTCCGCTGGA...AGGCCTCGCTGACACTTTTGTTCTCAGCTTCTGCCATCTGTGACTACTGATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR TCA 90 bp | GTGAGGCTGCAGATGGGACAGAAAGGGAGGGCAAGGCAAGATGAAAGCCCTAGGAGAGGTTCTTGGTCTTaGACTTGGAATAGCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VRLQMGQKGRARQDESPRRGSWS*TWNSSF Trigger: AAATGAGCTATTCCAAGTTCAAGACCAAGAACCTCT...CCTAGGGCTTTCATCTTGCCTTGCCCTCCCTTTCTGTCCCATCTGCAGCCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR GCA 90 bp | TATGTAGCCCTAACTCTAGCCCTAGCCCAGGTTCTCTCTCAAGGCTCAGGTGAAATTGGTACAGAACACTaGAAGCAGCCCCATGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YVALTLALAQVLSQGSGEIGTEH*KQPHVD Trigger: GTCTACATGGGGCTGCTTGCAGTGTTCTGTACCAAT...TTCACCTGAGCCTTGAGAGAGAACCTGGGCTAGGGCTAGAGTTAGGGCTACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR GCA 90 bp | GATATCAGTAGTCACAGATGGCAGAAGCTGAGAACAAAAGTGTCAGCGAGGCCTCAGTTTGCCTGTCTTTaGGTTGAGTCTGGGCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: DISSHRWQKLRTKVSARPQFACL*VESGHP Trigger: CGGATGCCCAGACTCAACGCAAAGACAGGCAAACTG...AGGCCTCGCTGACACTTTTGTTCTCAGCTTCTGCCATCTGTGACTACTGATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR TCA 90 bp | CACATGGCCCTGCCTCTACGCTTCCCAATCACAACACTTCATTTGATAGTCAAATCACTCTCACCTTGGTaGACTGTCACTAACCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HMALPLRFPITTLHLIVKSLSPW*TVTNRR Trigger: CCTCCGGTTAGTGACAGTTCACCAAGGTGAGAGTGA...TTTGACTATCAAATGAAGTGTTGTGATTGGGAAGCGTAGAGGCAGGGCCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR TCA 90 bp | TTTATTGTCACCGTTCTGAGCACATGGCCCTGCCTCTACGCTTCCCAATCACAAGAAGAGCTGAGGCAGTaGGTAGAGGAAATTGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: FIVTVLSTWPCLYASQSQEELRQ*VEEIEY Trigger: GTATTCAATTTCCTCTACTCACTGCCTCAGCTCTTC...TTGTGATTGGGAAGCGTAGAGGCAGGGCCATGTGCTCAGAACGGTGACAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
||
| CDS-3UTR TCA 90 bp | TCTAGGCCATTAATGCCCGCCAGGATGTTGATGGCATTGGTACAGAACACTGCAGCAGGGATTAAAACTTaGTGTTGGATCACAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SRPLMPARMLMALVQNTAAGIKT*CWITAL Trigger: CAGTGCTGTGATCCAACATCAAGTTTTAATCCCTGC...TGCAGTGTTCTGTACCAATGCCATCAACATCCTGGCGGGCATTAATGGCCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
||
| CDS-3UTR TCA 90 bp | AGAACACTGCAAGCAGCCCCATGTAGACGTAGTACAGGATCCCCAAGTCCAAATCAGGAGGAAACTGTTTaGGCTTTCAGGTCTTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: RTLQAAPCRRSTGSPSPNQEETV*AFRSSI Trigger: AATCGAAGACCTGAAAGCTCAAACAGTTTCCTCCTG...ATTTGGACTTGGGGATCCTGTACTACGTCTACATGGGGCTGCTTGCAGTGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
||
| 3UTR CAA 72 bp | GCCCTGCCTCTACGCTTCCCAATCACAACACTTCATTaGATAGTCAAATGTGAGGTCACCTTGGAGTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALPLRFPITTLH*IVKCEVTLEYV Trigger: TACATACTCCAAGGTGACCTCACATTTGACTATCAAATGAAGTGTTGTGATTGGGAAGCGTAGAGGCAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
||
| 3UTR CAA 72 bp | AAGAAAGGGTCTGATGGAACAGAGATCGGTATCCTATaGGGAAAGGTACCCGGTCTAACCCTTCCAATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KKGSDGTEIGIL*GKVPGLTLPIY Trigger: ATAGATTGGAAGGGTTAGACCGGGTACCTTTCCCAATAGGATACCGATCTCTGTTCCATCAGACCCTTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
||
| 3UTR CAA 72 bp | CCAAAGACTTTAAGTAGCAAGTTGATGAGGGTCATGTaGTTACACTCAGTGAAGGCACCGTCCTCACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PKTLSSKLMRVM*LHSVKAPSSLS Trigger: TGAGAGTGAGGACGGTGCCTTCACTGAGTGTAACAACATGACCCTCATCAACTTGCTACTTAAAGTCTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTGTCACCGTTCTGAGCACATGGCCCTGCCTCTACGCTTCCCAATCACAAGAAATTGAATACTTGTaGCATAAAGAAGAGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FIVTVLSTWPCLYASQSQEIEYL*HKEEQH Trigger: ATGCTGCTCTTCTTTATGCCACAAGTATTCAATTTC...TTGTGATTGGGAAGCGTAGAGGCAGGGCCATGTGCTCAGAACGGTGACAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS-3UTR GCA 90 bp | ATAAATATACCAGACTTGGCATATAGTTCAGTGGTAGAGCAGTTAAGTATAAGGTTCATGGTGGGGGAATaGCTTACACTGCTCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: INIPDLAYSSVVEQLSIRFMVGE*LTLLLH Trigger: GTGGAGGAGCAGTGTAAGGCATTCCCCCACCATGAA...CCTTATACTTAACTGCTCTACCACTGAACTATATGCCAAGTCTGGTATATTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS CCA 90 bp | CCCTGGGACTCTGGGATCTGCTGCTGGCTGAGCTTGTTGAGGTCCTaGCCACAGAGGCGCGCGGCGATAAAGTGGCTACGGAAGGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: PWDSGICCWLSLLRS*PQRRAAIKWLRKAG Trigger: CCCTGCCTTCCGTAGCCACTTTATCGCCGCGCGCCTCTGTGGCCAGGACCTCAACAAGCTCAGCCAGCAGCAGATCCCAGAGTCCCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS CCA 90 bp | CCCTGGGACTCTGGGATCTGCTGCTGGCTGAGCTTGTTGAGGTCCTaGCCACAGAGGCGCGCGGCGATAAAGTGGCGCTGCATTTCGCCA | + |
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Preference number: 5 (lower is better) Translates to: PWDSGICCWLSLLRS*PQRRAAIKWRCISP Trigger: TGGCGAAATGCAGCGCCACTTTATCGCCGCGCGCCTCTGTGGCCAGGACCTCAACAAGCTCAGCCAGCAGCAGATCCCAGAGTCCCAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
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| CDS-3UTR CAA 90 bp | ACCATGAGGAGAGGTAGTGAGGCAGCTGTGGGCAGCAGCAGCTTGTGGCGCCAGTGCTGCTGGCTGAGCTaGTTGAGGTCCTGGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: TMRRGSEAAVGSSSLWRQCCWLS*LRSWPQ Trigger: CTGTGGCCAGGACCTCAACAAGCTCAGCCAGCAGCA...CTGGCGCCACAAGCTGCTGCTGCCCACAGCTGCCTCACTACCTCTCCTCATGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215050.2 ENSMUST00000215248.2 |
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| CDS-3UTR CAA 90 bp | AAGTGTCAGCGAGGCCTGGACCAGAGGGTCATCTCGGACCAGACAGAGGCTGGTTGCTGCTGGCTGAGCTaGTTGAGGTCCTGGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: KCQRGLDQRVISDQTEAGCCWLS*LRSWPQ Trigger: CTGTGGCCAGGACCTCAACAAGCTCAGCCAGCAGCA...ACCAGCCTCTGTCTGGTCCGAGATGACCCTCTGGTCCAGGCCTCGCTGACACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215050.2 |
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| CDS-3UTR CAA 90 bp | ATAATAGAGGCTACAAGCCCACCTGGTGAGGCTGCAGATGGGACAGAAAGGGAGGTGGGCAGCAGCAGCTaGTGGCGCCAGCGGAGATTG | + |
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Preference number: 5 (lower is better) Translates to: IIEATSPPGEAADGTEREVGSSS*WRQRRL Trigger: CAATCTCCGCTGGCGCCACAAGCTGCTGCTGCCCAC...CTCCCTTTCTGTCCCATCTGCAGCCTCACCAGGTGGGCTTGTAGCCTCTATTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS CCA 90 bp | CTGAGCTTGTTGAGGTCCTGGCCACAGAGGCGCGCGGCGATAAAGTaGCGCTGCATTTCGCCAGGAGGAAACTGTTTGAGCTTTCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: LSLLRSWPQRRAAIK*RCISPGGNCLSFQV Trigger: GACCTGAAAGCTCAAACAGTTTCCTCCTGGCGAAATGCAGCGCCACTTTATCGCCGCGCGCCTCTGTGGCCAGGACCTCAACAAGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
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| CDS-3UTR CAA 90 bp | AACCCCAGGAAGATCATGCAGCAGATGGCAAGGAGGGCACCTATTAGGGCCACATGCTGCTGGCTGAGCTaGTTGAGGTCCTGGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: NPRKIMQQMARRAPIRATCCWLS*LRSWPQ Trigger: CTGTGGCCAGGACCTCAACAAGCTCAGCCAGCAGCA...TGTGGCCCTAATAGGTGCCCTCCTTGCCATCTGCTGCATGATCTTCCTGGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
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| CDS-3UTR CAA 90 bp | GCTGAGAACAAAAGTGTCAGCGAGGCCTGGACCAGAGGGTCATCTCGGACCAGAATCCAGCGGAAGGGCTaGGGCACCACGATGGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: AENKSVSEAWTRGSSRTRIQRKG*GTTMVV Trigger: TACAACCATCGTGGTGCCCAAGCCCTTCCGCTGGAT...TCTGGTCCGAGATGACCCTCTGGTCCAGGCCTCGCTGACACTTTTGTTCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS-3UTR CAA 90 bp | AAGTGTCAGCGAGGCCTGGACCAGAGGGTCATCTCGGACCAGACAGAGGCTGGTATGCCCGCCAGGATGTaGATGGCATTGGTACAGAAC | + |
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Preference number: 5 (lower is better) Translates to: KCQRGLDQRVISDQTEAGMPARM*MALVQN Trigger: GTTCTGTACCAATGCCATCAACATCCTGGCGGGCAT...ACCAGCCTCTGTCTGGTCCGAGATGACCCTCTGGTCCAGGCCTCGCTGACACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS GCA 90 bp | TTGTTGAGGTCCTGGCCACAGAGGCGCGCGGCGATAAAGTGGCGCTaGATTTCGCCAGGAGGAAACTGTTTGAGCTTTCAGGTCTTCGAT | + |
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Preference number: 5 (lower is better) Translates to: LLRSWPQRRAAIKWR*ISPGGNCLSFQVFD Trigger: ATCGAAGACCTGAAAGCTCAAACAGTTTCCTCCTGGCGAAATGCAGCGCCACTTTATCGCCGCGCGCCTCTGTGGCCAGGACCTCAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
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| CDS CCA 90 bp | AAGCAGAAGAGGATGATAAGGAAAACAGCACCGCTGATCACTCCCTaGGACTCTGGGATCTGCTGCTGGCTGAGCTTGTTGAGGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: KQKRMIRKTAPLITP*DSGICCWLSLLRSW Trigger: CCAGGACCTCAACAAGCTCAGCCAGCAGCAGATCCCAGAGTCCCAGGGAGTGATCAGCGGTGCTGTTTTCCTTATCATCCTCTTCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215248.2 |
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| CDS GCA 90 bp | GCACCTATTAGGGCCACAAATTCATGGTGGGGGAATGCCTTACACTaGTCCTCCACGAAGCAGTTCAGGAAGGGGAAAGGGATGAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: APIRATNSWWGNALH*SSTKQFRKGKGMKQ Trigger: CTGCTTCATCCCTTTCCCCTTCCTGAACTGCTTCGTGGAGGAGCAGTGTAAGGCATTCCCCCACCATGAATTTGTGGCCCTAATAGGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS-3UTR CAA 90 bp | GTGAGGCTGCAGATGGGACAGAAAGGGAGGGCAAGGCAAGATGAAAGCCCTAGGAGGATGTTGATGGCATaGGTACAGAACACTGCAAGC | + |
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Preference number: 5 (lower is better) Translates to: VRLQMGQKGRARQDESPRRMLMA*VQNTAS Trigger: GCTTGCAGTGTTCTGTACCAATGCCATCAACATCCT...CCTAGGGCTTTCATCTTGCCTTGCCCTCCCTTTCTGTCCCATCTGCAGCCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS-3UTR CAA 90 bp | GCCCACCTGGTGAGGCTGCAGATGGGACAGAAAGGGAGGGCAAGGCAAGATGAATCCAGTTCCACCAGGTaGAAGACAATGATAGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: AHLVRLQMGQKGRARQDESSSTR*KTMIEA Trigger: TGCTTCTATCATTGTCTTCAACCTGGTGGAACTGGA...TTCATCTTGCCTTGCCCTCCCTTTCTGTCCCATCTGCAGCCTCACCAGGTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS-3UTR CAA 90 bp | AGCACCACGAAGGTTAAAAAGGACAGAGGGAGGGGATGCTACACTAGAGGAACATGGCGCCAGCGGAGATaGAGGACATCATCAGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: STTKVKKDRGRGCYTRGTWRQRR*RTSSAN Trigger: GTTTGCTGATGATGTCCTCAATCTCCGCTGGCGCCA...TGTTCCTCTAGTGTAGCATCCCCTCCCTCTGTCCTTTTTAACCTTCGTGGTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS-3UTR CAA 90 bp | ATAATAGAGGCTACAAGCCCACCTGGTGAGGCTGCAGATGGGACAGAAAGGGAGAAGAGCAGCATGGTCTaGCTGAAGTGTCCCAAGATC | + |
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Preference number: 5 (lower is better) Translates to: IIEATSPPGEAADGTEREKSSMV*LKCPKI Trigger: GATCTTGGGACACTTCAGCAAGACCATGCTGCTCTT...CTCCCTTTCTGTCCCATCTGCAGCCTCACCAGGTGGGCTTGTAGCCTCTATTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS-3UTR CAA 90 bp | GAAGCACCACGAAGGTTAAAAAGGACAGAGGGAGGGGATGCTACACTAGAGGAAGAAGAGTCGGACGAGTaGGTAACGAATGGAGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: EAPRRLKRTEGGDATLEEEESDE*VTNGEG Trigger: ACCTTCTCCATTCGTTACCAACTCGTCCGACTCTTC...TTCCTCTAGTGTAGCATCCCCTCCCTCTGTCCTTTTTAACCTTCGTGGTGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS-3UTR CAA 90 bp | CATTGGTACAGAACACTGCAAGCAGCCCCATGTAGACGTAGTACAGGATCCCCACCAGGAGGAAACTGTTaGAGCTTTCAGGTCTTCGAT | + |
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Preference number: 5 (lower is better) Translates to: HWYRTLQAAPCRRSTGSPPGGNC*SFQVFD Trigger: ATCGAAGACCTGAAAGCTCAAACAGTTTCCTCCTGG...TGGGGATCCTGTACTACGTCTACATGGGGCTGCTTGCAGTGTTCTGTACCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
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| CDS-3UTR CAA 90 bp | TGGCAGAAGCTGAGAACAAAAGTGTCAGCGAGGCCTGGACCAGAGGGTCATCTCACTTTAAGTAGCAAGTaGATGAGGGTCATGTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: WQKLRTKVSARPGPEGHLTLSSK*MRVMLL Trigger: TAACAACATGACCCTCATCAACTTGCTACTTAAAGT...GAGATGACCCTCTGGTCCAGGCCTCGCTGACACTTTTGTTCTCAGCTTCTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS-3UTR CAA 90 bp | GATATCAGTAGTCACAGATGGCAGAAGCTGAGAACAAAAGTGTCAGCGAGGCCTTTGATGAGGGTCATGTaGTTACACTCAGTGAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: DISSHRWQKLRTKVSARPLMRVM*LHSVKA Trigger: TGCCTTCACTGAGTGTAACAACATGACCCTCATCAA...AGGCCTCGCTGACACTTTTGTTCTCAGCTTCTGCCATCTGTGACTACTGATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS-3UTR CAA 90 bp | GATATCAGTAGTCACAGATGGCAGAAGCTGAGAACAAAAGTGTCAGCGAGGCCTGAGGAAATTGAATACTaGTGGCATAAAGAAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: DISSHRWQKLRTKVSARPEEIEY*WHKEEQ Trigger: CTGCTCTTCTTTATGCCACAAGTATTCAATTTCCTC...AGGCCTCGCTGACACTTTTGTTCTCAGCTTCTGCCATCTGTGACTACTGATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS CCA 72 bp | TCTGGGATCTGCTGCTGGCTGAGCTTGTTGAGGTCCTaGCCACAGAGGCGCGCGGCGATAAAGTGGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SGICCWLSLLRS*PQRRAAIKWRC Trigger: GCAGCGCCACTTTATCGCCGCGCGCCTCTGTGGCCAGGACCTCAACAAGCTCAGCCAGCAGCAGATCCCAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
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| CDS CAA 72 bp | CCCTGGGACTCTGGGATCTGCTGCTGGCTGAGCTTGTaGAGGTCCTGGCCACAGAGGCGCGCGGCGATAAAG | + |
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Preference number: 6 (lower is better) Translates to: PWDSGICCWLSL*RSWPQRRAAIK Trigger: CTTTATCGCCGCGCGCCTCTGTGGCCAGGACCTCAACAAGCTCAGCCAGCAGCAGATCCCAGAGTCCCAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215248.2 |
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| CDS CAA 90 bp | CTGATCACTCCCTGGGACTCTGGGATCTGCTGCTGGCTGAGCTTGTaGAGGTCCTGGCCACAGAGGCGCGCGGCGATAAAGTGGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LITPWDSGICCWLSL*RSWPQRRAAIKWRC Trigger: GCAGCGCCACTTTATCGCCGCGCGCCTCTGTGGCCAGGACCTCAACAAGCTCAGCCAGCAGCAGATCCCAGAGTCCCAGGGAGTGATCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
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| CDS CAA 90 bp | CTGATCACTCCCTGGGACTCTGGGATCTGCTGCTGGCTGAGCTTGTaGAGGTCCTGGCCACAGAGGCGCGCGGCGATAAAGTGGCTACGG | + |
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Preference number: 6 (lower is better) Translates to: LITPWDSGICCWLSL*RSWPQRRAAIKWLR Trigger: CCGTAGCCACTTTATCGCCGCGCGCCTCTGTGGCCAGGACCTCAACAAGCTCAGCCAGCAGCAGATCCCAGAGTCCCAGGGAGTGATCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS CCA 72 bp | TCTGGGATCTGCTGCTGGCTGAGCTTGTTGAGGTCCTaGCCACAGAGGCGCGCGGCGATAAAGTGGCTACGG | + |
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Preference number: 6 (lower is better) Translates to: SGICCWLSLLRS*PQRRAAIKWLR Trigger: CCGTAGCCACTTTATCGCCGCGCGCCTCTGTGGCCAGGACCTCAACAAGCTCAGCCAGCAGCAGATCCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS CCA 72 bp | TTGAGGTCCTGGCCACAGAGGCGCGCGGCGATAAAGTaGCGCTGCATTTCGCCAGGAGGAAACTGTTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LRSWPQRRAAIK*RCISPGGNCLS Trigger: GCTCAAACAGTTTCCTCCTGGCGAAATGCAGCGCCACTTTATCGCCGCGCGCCTCTGTGGCCAGGACCTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
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| CDS CCA 72 bp | CACAAAATCTGCTGCTGGCTGAGCTTGTTGAGGTCCTaGCCACAGAGGCGCGCGGCGATAAAGTGGCTACGG | + |
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Preference number: 6 (lower is better) Translates to: HKICCWLSLLRS*PQRRAAIKWLR Trigger: CCGTAGCCACTTTATCGCCGCGCGCCTCTGTGGCCAGGACCTCAACAAGCTCAGCCAGCAGCAGATTTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215050.2 |
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| CDS GCA 72 bp | TCCTGGCCACAGAGGCGCGCGGCGATAAAGTGGCGCTaGATTTCGCCAGGAGGAAACTGTTTGAGCTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SWPQRRAAIKWR*ISPGGNCLSFQ Trigger: CTGAAAGCTCAAACAGTTTCCTCCTGGCGAAATGCAGCGCCACTTTATCGCCGCGCGCCTCTGTGGCCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
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| CDS GCA 72 bp | AGGGCCACAAATTCATGGTGGGGGAATGCCTTACACTaGTCCTCCACGAAGCAGTTCAGGAAGGGGAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: RATNSWWGNALH*SSTKQFRKGKG Trigger: CCCTTTCCCCTTCCTGAACTGCTTCGTGGAGGAGCAGTGTAAGGCATTCCCCCACCATGAATTTGTGGCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054708.5 |
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| CDS CCA 72 bp | AGGATGATAAGGAAAACAGCACCGCTGATCACTCCCTaGGACTCTGGGATCTGCTGCTGGCTGAGCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: RMIRKTAPLITP*DSGICCWLSLL Trigger: CAACAAGCTCAGCCAGCAGCAGATCCCAGAGTCCCAGGGAGTGATCAGCGGTGCTGTTTTCCTTATCATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054708.5 ENSMUST00000215248.2 |
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| CDS TCA 72 bp | GCTTTCAGGTCTTCGATTAAAGCAGGGATTAAAACTTaGTGTTGGATCACAGCACTGTGCCAACGCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: AFRSSIKAGIKT*CWITALCQRFP Trigger: TGGAAAGCGTTGGCACAGTGCTGTGATCCAACATCAAGTTTTAATCCCTGCTTTAATCGAAGACCTGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215248.2 |
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