Pregenerated sensors for DOXL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029813Ensembl transcript IDs: ENSMUST00000031837.8
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTCGGTACCTGCTCCTGTaGCCCATCCCGTGGGTCGTA | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVRYLLL*PIPWVV Trigger: TACGACCCACGGGATGGGCCACAGGAGCAGGTACCG...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR TCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGAGCACCAAAGAAGATaGCGACACGGGCTTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVEHQRR*RHGLPA Trigger: TGCGGGAAGCCCGTGTCGTCATCTTCTTTGGTGCTC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTTGTGGAAGCCCACTGTaGCCCAGGCCACCAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVCGSPL*PRPPNP Trigger: AGGATTTGGTGGCCTGGGCCACAGTGGGCTTCCACA...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR TCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTCCATCTGCGTATTTCTaGGCCAGTTCCTCTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVPSAYF*ASSSGL Trigger: CAGCCCAGAGGAACTGGCTCAGAAATACGCAGATGG...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGGAAATGGGTCTAGATaGCCAGGATGGATCGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVGNGSR*PGWIVP Trigger: GGGCACGATCCATCCTGGGCATCTAGACCCATTTCC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTACACCTTGCTTCTTTTaGCAGCCTGGCAGTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVTPCFF*QPGSGT Trigger: GGTGCCACTGCCAGGCTGGCAAAAGAAGCAAGGTGT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTCTGAGCCAGTTCCTCTaGGCTGTTGTAGAGCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVLSQFL*AVVELA Trigger: GGCAAGCTCTACAACAGCCCAGAGGAACTGGCTCAG...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR TCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTTCAGCGTACGGTAGATaGGGCTGTACTCTGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVSAYGR*GCTLLW Trigger: CCAAAGCAGAGTACAGCCTCATCTACCGTACGCTGA...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR TCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGTGTCAAGGAAGAACTaGTGCAGAGACTTGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVVSRKN*CRDLVA Trigger: GGCCACCAAGTCTCTGCATCAGTTCTTCCTTGACAC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTTGTCAGGCTCTTTTGTaGCATCCCCATGGCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVCQALL*HPHGSG Trigger: TCCAGAGCCATGGGGATGGCACAAAAGAGCCTGACA...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGGTGTCTCAGATGGCTaGAGCTGCAGCTCCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVGVSDG*SCSSFL Trigger: CAAAAAGGAGCTGCAGCTGCAGCCATCTGAGACACC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGTCCAAGAGACACCTTaGTTCTTTTGCCAGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVVQETP*FFCQPG Trigger: GCCAGGCTGGCAAAAGAAGCAAGGTGTCTCTTGGAC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTAGTTGGTGTCTCAGATaGCTGCAGCTGCAGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVSWCLR*LQLQLL Trigger: AAGGAGCTGCAGCTGCAGCCATCTGAGACACCAACT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTACTGATGCAGAGACTTaGTGGCCTCTGTCAGCGTAC | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVTDAET*WPLSAY Trigger: GTACGCTGACAGAGGCCACCAAGTCTCTGCATCAGT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGAGACAGAGAGCTCGTaGATAGGAGACTGGTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVETESS*IGDWSV Trigger: GACAGACCAGTCTCCTATCCACGAGCTCTCTGTCTC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTCTTCTTTTGCCAGCCTaGCAGTGGCACCTGATGGAT | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVLLLPA*QWHLMD Trigger: ATCCATCAGGTGCCACTGCCAGGCTGGCAAAAGAAG...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTTCAGATGGCTGCAGCTaGAGCTCCTTTTTGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVSDGCS*SSFLSI Trigger: GATGGACAAAAAGGAGCTGCAGCTGCAGCCATCTGA...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTTGTACTTGGCCTGAGTaGCTGCAGATACATGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVCTWPE*LQIHVL Trigger: GAGGACATGTATCTGCAGGCACTCAGGCCAAGTACA...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTTCTGTAACAGCAAGATaGCAGTTACCCAGCCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVSVTAR*QLPSPV Trigger: CACTGGGCTGGGTAACTGCCATCTTGCTGTTACAGA...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGTTCTTGCCCAAAGTTaGTGTCTCAGATGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVVLAQS*CLRWLQ Trigger: CTGCAGCCATCTGAGACACCAACTTTGGGCAAGAAC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR TCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTCAGGGGCCATATATGTaGAGGTCAGATAGTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVQGPYM*RSDSPQ Trigger: TTGAGGACTATCTGACCTTCACATATATGGCCCCTG...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR TCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTACTTCTGTGCTTCCATaGTCCAGAAGGATCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVTSVLP*SRRISR Trigger: TCTGGAGATCCTTCTGGATCATGGAAGCACAGAAGT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTTGCTTCACTTTCCAGTaGTGGACTTCTGTGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVCFTFQ*WTSVLP Trigger: TGGAAGCACAGAAGTCCAGCACTGGAAAGTGAAGCA...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGAGAAGACTAGGGGCTaGTTTGTGTCCTTGTCAACT | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVEKTRG*FVSLST Trigger: AGTTGACAAGGACACAAAGCAGCCCCTAGTCTTCTC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTAGTCCTCTGGGATATTaGAGGAAGAGAAGACTAGGG | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVSPLGY*RKRRLG Trigger: CCCTAGTCTTCTCTTCCTCCAATATCCCAGAGGACT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTCATGGACCAAGCCAGTaGCTTGCATTTTTGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVHGPSQ*LAFLPS Trigger: TGAAGGCAAAAATGCAAGCCACTGGCTTGGTCCATG...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTTCTGGAATCTGTTCTTaGTGCCTGCTACATCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVSGICS*CLLHPG Trigger: ACCTGGATGTAGCAGGCACCAAGAACAGATTCCAGA...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR TCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGCAGCAGCATTTCTATaGGGTATACTGAGTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVAAAFL*GILSSC Trigger: GCAAGAACTCAGTATACCTCATAGAAATGCTGCTGC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR TCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTACTTTAGGATGCTTCTaGGCACCAAAGAAGATGACG | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVTLGCF*APKKMT Trigger: CGTCATCTTCTTTGGTGCTCAGAAGCATCCTAAAGT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR TCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGAATACATGGGTGTGTaGTTGAGAGATGTAGCGCAT | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVEYMGV*LRDVAH Trigger: ATGCGCTACATCTCTCAATCACACACCCATGTATTC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR TCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGGGTGTGAATGTTGCTaGATACATGGGTGTGTGATT | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVGCECC*IHGCVI Trigger: AATCACACACCCATGTATTCAGCAACATTCACACCC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR TCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTTGTACTAGGTGGGTGTaGATGTTGCTGAATACATGG | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVCTRWV*MLLNTW Trigger: CCATGTATTCAGCAACATTCACACCCACCTAGTACA...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR TCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGTATTTCCAAGTGCCTaGTGTCTCAGGTTCTTAGAG | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVVFPSA*CLRFLE Trigger: CTCTAAGAACCTGAGACATCAGGCACTTGGAAATAC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGGTATACTGAGTTCTTaGCCAAAGTTGGTGTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVGILSS*PKLVSQ Trigger: CTGAGACACCAACTTTGGGCAAGAACTCAGTATACC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGATGAGGCTGTACTCTaGTTTGGAAATGGGTCTAGA | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVDEAVL*FGNGSR Trigger: TCTAGACCCATTTCCAAAGCAGAGTACAGCCTCATC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTACTCACTTCTCCATCTaGGTATTTCTGAGCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVTHFSI*VFLSQF Trigger: GAACTGGCTCAGAAATACGCAGATGGAGAAGTGAGT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTACCAAGCCAGTGGCTTaGATTTTTGCCTTCATTGCT | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVTKPVA*IFAFIA Trigger: AGCAATGAAGGCAAAAATGCAAGCCACTGGCTTGGT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTAACCAGCTACAGCGCTaGTCAGATTTTGTGTCATCA | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVNQLQR*SDFVSS Trigger: TGATGACACAAAATCTGACCAGCGCTGTAGCTGGTT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTAGTGGGAAAGTCCTCTaGGATATTGGAGGAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVSGKVL*DIGGRE Trigger: TTCTCTTCCTCCAATATCCCAGAGGACTTTCCCACT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTAAAGTGGTGCCTAATTaGCATTTCTGCTGGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVKVVPN*HFCWHL Trigger: GAGATGCCAGCAGAAATGCCAATTAGGCACCACTTT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTATGATCTGCAGTGTCTaGAATCTGTTCTTGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVMICSV*NLFLVP Trigger: AGGCACCAAGAACAGATTCCAGACACTGCAGATCAT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTCCTAATTGGCATTTCTaGTGGCATCTCAAAGAGACA | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVPNWHF*WHLKET Trigger: TGTCTCTTTGAGATGCCAGCAGAAATGCCAATTAGG...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR TCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTAGTTCTGCACAATCTTaGTCTCATAAACACTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVSSAQS*SHKHSG Trigger: ACCTGAGTGTTTATGAGATCAAGATTGTGCAGAACT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTTTGGAGTTAAAGTGGTaGCTAATTGGCATTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVLELKW*LIGISA Trigger: AGCAGAAATGCCAATTAGGCACCACTTTAACTCCAA...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR GCA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTAGTGGCTTGCATTTTTaGCTTCATTGCTCCATTAGT | + |
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Preference number: 4 (lower is better) Translates to: IVCSCADLGLLSRSWGPVSGLHF*LHCSIS Trigger: ACTAATGGAGCAATGAAGGCAAAAATGCAAGCCACT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS TCA 90 bp | CGAGTAGCACTGCCAGGGCCCCAGCCCACATCCATGTACTTGGCCTaGGTGCCTGCAGATACATGTCCTCCGAACTGTGCCACCGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: RVALPGPQPTSMYLA*VPADTCPPNCATAS Trigger: AGAGGCGGTGGCACAGTTCGGAGGACATGTATCTGCAGGCACTCAGGCCAAGTACATGGATGTGGGCTGGGGCCCTGGCAGTGCTACTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CAA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGACACCTTGCTTCTTTaGCCAGCCTGGCAGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: IVCSCADLGLLSRSWGPVDTLLL*PAWQWH Trigger: GTGCCACTGCCAGGCTGGCAAAAGAAGCAAGGTGTC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS CCA 90 bp | CACCTTGCTTCTTTTGCCAGCCTGGCAGTGGCACCTGATGGATTTTaGAGTAGGTCTTCAGACGGTACCTGCTCCTGTGGCCCATCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: HLASFASLAVAPDGF*SRSSDGTCSCGPSR Trigger: ACGGGATGGGCCACAGGAGCAGGTACCGTCTGAAGACCTACTCCAAAATCCATCAGGTGCCACTGCCAGGCTGGCAAAAGAAGCAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTCAGTGTCAGGCTCTTTaGTGCCATCCCCATGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IVCSCADLGLLSRSWGPVQCQAL*CHPHGS Trigger: AGAGCCATGGGGATGGCACAAAAGAGCCTGACACTG...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS GCA 90 bp | CATCAGGAAGTTCTGCACAATCTTGATCTCATAAACACTCAGGTCTaGGAATACCCGGGGCCTGCCATTCAGGCTCCACCTGGGGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HQEVLHNLDLINTQV*EYPGPAIQAPPGAV Trigger: GACCGCCCCAGGTGGAGCCTGAATGGCAGGCCCCGGGTATTCGCAGACCTGAGTGTTTATGAGATCAAGATTGTGCAGAACTTCCTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS GCA 90 bp | AGACTTGGTGGCCTCTGTCAGCGTACGGTAGATGAGGCTGTACTCTaGTTTGGAAATGGGTCTAGATGCCCAGGATGGATCGTGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLGGLCQRTVDEAVL*FGNGSRCPGWIVPR Trigger: CCTGGGCACGATCCATCCTGGGCATCTAGACCCATTTCCAAAGCAGAGTACAGCCTCATCTACCGTACGCTGACAGAGGCCACCAAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGGCTGCTTTGTGTCCTaGTCAACTGACTCCGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: IVCSCADLGLLSRSWGPVGCFVS*STDSVS Trigger: ACTCACGGAGTCAGTTGACAAGGACACAAAGCAGCC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGGTCTAGCCATGCTGTaGGTAGTGGGAAAGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IVCSCADLGLLSRSWGPVGLAML*VVGKSS Trigger: AGAGGACTTTCCCACTACCAACAGCATGGCTAGACC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGGAGGACTGATGAGATaGTCCGTAGCACCAGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: IVCSCADLGLLSRSWGPVGGLMR*SVAPAC Trigger: ACATGCTGGTGCTACGGACAATCTCATCAGTCCTCC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS GCA 90 bp | CGTACGGTAGATGAGGCTGTACTCTGCTTTGGAAATGGGTCTAGATaGCCAGGATGGATCGTGCCCAGGCCCGGGAGATATTTCTCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RTVDEAVLCFGNGSR*PGWIVPRPGRYFSH Trigger: ATGCGAGAAATATCTCCCGGGCCTGGGCACGATCCATCCTGGGCATCTAGACCCATTTCCAAAGCAGAGTACAGCCTCATCTACCGTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTAGCTGCAGCTCCTTTTaGTCCATCAGGAAGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IVCSCADLGLLSRSWGPVSCSSF*SIRKFC Trigger: GCAGAACTTCCTGATGGACAAAAAGGAGCTGCAGCT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTAGGCTGTACTCTGCTTaGGAAATGGGTCTAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: IVCSCADLGLLSRSWGPVRLYSA*EMGLDA Trigger: GGCATCTAGACCCATTTCCAAAGCAGAGTACAGCCT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTAGACTAGGGGCTGCTTaGTGTCCTTGTCAACTGACT | + |
|
Preference number: 5 (lower is better) Translates to: IVCSCADLGLLSRSWGPVRLGAA*CPCQLT Trigger: AGTCAGTTGACAAGGACACAAAGCAGCCCCTAGTCT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGACCAAGCCAGTGGCTaGCATTTTTGCCTTCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: IVCSCADLGLLSRSWGPVDQASG*HFCLHC Trigger: GCAATGAAGGCAAAAATGCAAGCCACTGGCTTGGTC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS TCA 90 bp | AATGGCATGGGCCCAACAGCAAACTCAGTGACTTTAGGATGCTTCTaGGCACCAAAGAAGATGACGACACGGGCTTCCCGCACAGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: NGMGPTANSVTLGCF*APKKMTTRASRTGL Trigger: GAGTCCTGTGCGGGAAGCCCGTGTCGTCATCTTCTTTGGTGCTCAGAAGCATCCTAAAGTCACTGAGTTTGCTGTTGGGCCCATGCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS TCA 90 bp | GAGCTCGTGGATAGGAGACTGGTCTGTCGGTGTCATAGTGATGAATaGCTTCCAGGAAGGTGGCTGTGTCTGGACAATCAATGCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ELVDRRLVCRCHSDE*LPGRWLCLDNQCQR Trigger: CCGCTGGCATTGATTGTCCAGACACAGCCACCTTCCTGGAAGTCATTCATCACTATGACACCGACAGACCAGTCTCCTATCCACGAGCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS CCA 90 bp | TCAGGTGTGGTCATGTTGGTACTAGCCTCAGAACGGGGCATGTTGTaGAAGCCCACTGTGGCCCAGGCCACCAAATCCTTATCTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SGVVMLVLASERGML*KPTVAQATKSLSSM Trigger: CATTGAAGATAAGGATTTGGTGGCCTGGGCCACAGTGGGCTTCCACAACATGCCCCGTTCTGAGGCTAGTACCAACATGACCACACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTAAGTCCTCTGGGATATaGGAGGAAGAGAAGACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: IVCSCADLGLLSRSWGPVKSSGI*EEEKTR Trigger: CCTAGTCTTCTCTTCCTCCAATATCCCAGAGGACTT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGTCCCTGCACTGGAGTaGAAGTCTTCTCTAAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IVCSCADLGLLSRSWGPVVPALE*KSSLKL Trigger: CAACTTTAGAGAAGACTTCAACTCCAGTGCAGGGAC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS GCA 90 bp | GCCTCTTGTACACTGACTTCATATGCAATACGCACACCCCGAAAGTaGACATTCAGGATCTGCAGACCAGAGGAGGGTCTTAGCCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASCTLTSYAIRTPRK*TFRICRPEEGLSRK Trigger: CTTCCGGCTAAGACCCTCCTCTGGTCTGCAGATCCTGAATGTGCACTTTCGGGGTGTGCGTATTGCATATGAAGTCAGTGTACAAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS GCA 90 bp | CATGTACTTGGCCTGAGTGCCTGCAGATACATGTCCTCCGAACTGTaGCACCGCCTCTTGTACACTGACTTCATATGCAATACGCACACC | + |
|
Preference number: 5 (lower is better) Translates to: HVLGLSACRYMSSEL*HRLLYTDFICNTHT Trigger: GGTGTGCGTATTGCATATGAAGTCAGTGTACAAGAGGCGGTGGCACAGTTCGGAGGACATGTATCTGCAGGCACTCAGGCCAAGTACATG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS CCA 90 bp | CAAGGGATACCTGGTCCAAGAGACACCTTGCTTCTTTTGCCAGCCTaGCAGTGGCACCTGATGGATTTTGGAGTAGGTCTTCAGACGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QGIPGPRDTLLLLPA*QWHLMDFGVGLQTV Trigger: TACCGTCTGAAGACCTACTCCAAAATCCATCAGGTGCCACTGCCAGGCTGGCAAAAGAAGCAAGGTGTCTCTTGGACCAGGTATCCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS TCA 90 bp | GCAGCTGCAGCTCCTTTTTGTCCATCAGGAAGTTCTGCACAATCTTaGTCTCATAAACACTCAGGTCTGCGAATACCCGGGGCCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AAAAPFCPSGSSAQS*SHKHSGLRIPGACH Trigger: ATGGCAGGCCCCGGGTATTCGCAGACCTGAGTGTTTATGAGATCAAGATTGTGCAGAACTTCCTGATGGACAAAAAGGAGCTGCAGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS GCA 90 bp | CATCTGCGTATTTCTGAGCCAGTTCCTCTGGGCTGTTGTAGAGCTTaGCGTTATACCAGAGCTGCTTCACTTTCCAGTGCTGGACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLRISEPVPLGCCRA*RYTRAASLSSAGLL Trigger: CAGAAGTCCAGCACTGGAAAGTGAAGCAGCTCTGGTATAACGGCAAGCTCTACAACAGCCCAGAGGAACTGGCTCAGAAATACGCAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS GCA 90 bp | AGACCACAGGGGGATCCCAAGGATTATTTTGGCTGTAGATGCTGCTaGTGCACTTCTCAGAATCTTGGTACTCGGTCACAGCCAAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RPQGDPKDYFGCRCC*CTSQNLGTRSQPRD Trigger: ATCCCTTGGCTGTGACCGAGTACCAAGATTCTGAGAAGTGCAGCAGCAGCATCTACAGCCAAAATAATCCTTGGGATCCCCCTGTGGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS-3UTR CAA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTGCTCTTGGGTGTAATTaGCTTGCTTTAGGGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: IVCSCADLGLLSRSWGPVALGCN*LALGYF Trigger: GAAATACCCTAAAGCAAGCAAATTACACCCAAGAGC...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTAAAGTAGAAGGCTGCTaGTTGCTCTTGGGTGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: IVCSCADLGLLSRSWGPVKVEGC*LLLGVI Trigger: AATTACACCCAAGAGCAACAAGCAGCCTTCTACTTT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS GCA 90 bp | GTGGGAAAGTCCTCTGGGATATTGGAGGAAGAGAAGACTAGGGGCTaGTTTGTGTCCTTGTCAACTGACTCCGTGAGTACCAGTATACTC | + |
|
Preference number: 5 (lower is better) Translates to: VGKSSGILEEEKTRG*FVSLSTDSVSTSIL Trigger: GAGTATACTGGTACTCACGGAGTCAGTTGACAAGGACACAAAGCAGCCCCTAGTCTTCTCTTCCTCCAATATCCCAGAGGACTTTCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTCTGCTCTTGTGCTGATCTGGGGCTGTTAAGCAGGAGCTGGGGCCCGGTTAAGTCTTCTCTAAAGTaGGAGTTAAAGTGGTGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: IVCSCADLGLLSRSWGPVKSSLK*ELKWCL Trigger: TAGGCACCACTTTAACTCCAACTTTAGAGAAGACTT...AACCGGGCCCCAGCTCCTGCTTAACAGCCCCAGATCAGCACAAGAGCAGACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS TCA 90 bp | AAGAGAAGACTAGGGGCTGCTTTGTGTCCTTGTCAACTGACTCCGTaGGTACCAGTATACTCACTTCTCCATCTGCGTATTTCTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KRRLGAALCPCQLTP*VPVYSLLHLRISEP Trigger: TGGCTCAGAAATACGCAGATGGAGAAGTGAGTATACTGGTACTCACGGAGTCAGTTGACAAGGACACAAAGCAGCCCCTAGTCTTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS GCA 90 bp | ATGAGGTATACTGAGTTCTTGCCCAAAGTTGGTGTCTCAGATGGCTaGAGCTGCAGCTCCTTTTTGTCCATCAGGAAGTTCTGCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: MRYTEFLPKVGVSDG*SCSSFLSIRKFCTI Trigger: GATTGTGCAGAACTTCCTGATGGACAAAAAGGAGCTGCAGCTGCAGCCATCTGAGACACCAACTTTGGGCAAGAACTCAGTATACCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS CCA 90 bp | CAGTATACTCACTTCTCCATCTGCGTATTTCTGAGCCAGTTCCTCTaGGCTGTTGTAGAGCTTGCCGTTATACCAGAGCTGCTTCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: QYTHFSICVFLSQFL*AVVELAVIPELLHF Trigger: AAAGTGAAGCAGCTCTGGTATAACGGCAAGCTCTACAACAGCCCAGAGGAACTGGCTCAGAAATACGCAGATGGAGAAGTGAGTATACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS TCA 90 bp | CCAGAAAATCTAGCACATCCTCCTTATCGGGCAGCAGCATTTCTATaGGGTATACTGAGTTCTTGCCCAAAGTTGGTGTCTCAGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PENLAHPPYRAAAFL*GILSSCPKLVSQMA Trigger: AGCCATCTGAGACACCAACTTTGGGCAAGAACTCAGTATACCTCATAGAAATGCTGCTGCCCGATAAGGAGGATGTGCTAGATTTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS TCA 90 bp | GTGGCCCAGGCCACCAAATCCTTATCTTCAATGTTTGTATTGTTCTaGATAAAATCCTCGAAGACCACAGGGGGATCCCAAGGATTATTT | + |
|
Preference number: 5 (lower is better) Translates to: VAQATKSLSSMFVLF*IKSSKTTGGSQGLF Trigger: AAATAATCCTTGGGATCCCCCTGTGGTCTTCGAGGATTTTATTCAGAACAATACAAACATTGAAGATAAGGATTTGGTGGCCTGGGCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS CCA 72 bp | GTGGCTGTGTCTGGACAATCAATGCCAGCGGCTAACTaGCGAGTAGCACTGCCAGGGCCCCAGCCCACATCC | + |
|
Preference number: 6 (lower is better) Translates to: VAVSGQSMPAAN*RVALPGPQPTS Trigger: GGATGTGGGCTGGGGCCCTGGCAGTGCTACTCGCCAGTTAGCCGCTGGCATTGATTGTCCAGACACAGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS GCA 72 bp | GCCCCAGCCCACATCCATGTACTTGGCCTGAGTGCCTaGAGATACATGTCCTCCGAACTGTGCCACCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: APAHIHVLGLSA*RYMSSELCHRL Trigger: GAGGCGGTGGCACAGTTCGGAGGACATGTATCTGCAGGCACTCAGGCCAAGTACATGGATGTGGGCTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS GCA 72 bp | CAGGGCCCCAGCCCACATCCATGTACTTGGCCTGAGTaGCTGCAGATACATGTCCTCCGAACTGTGCCACCG | + |
|
Preference number: 6 (lower is better) Translates to: QGPSPHPCTWPE*LQIHVLRTVPP Trigger: CGGTGGCACAGTTCGGAGGACATGTATCTGCAGGCACTCAGGCCAAGTACATGGATGTGGGCTGGGGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS CAA 72 bp | GGTCACAGCCAAGGGATACCTGGTCCAAGAGACACCTaGCTTCTTTTGCCAGCCTGGCAGTGGCACCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GHSQGIPGPRDT*LLLPAWQWHLM Trigger: CATCAGGTGCCACTGCCAGGCTGGCAAAAGAAGCAAGGTGTCTCTTGGACCAGGTATCCCTTGGCTGTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS GCA 72 bp | GATGAGGCTGTACTCTGCTTTGGAAATGGGTCTAGATaGCCAGGATGGATCGTGCCCAGGCCCGGGAGATAT | + |
|
Preference number: 6 (lower is better) Translates to: DEAVLCFGNGSR*PGWIVPRPGRY Trigger: ATATCTCCCGGGCCTGGGCACGATCCATCCTGGGCATCTAGACCCATTTCCAAAGCAGAGTACAGCCTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS CCA 72 bp | TGGGGCGGTCTGCAATGGCCATCTGTAACAGCAAGATaGCAGTTACCCAGCCCAGTGTCAGGCTCTTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: WGGLQWPSVTAR*QLPSPVSGSFV Trigger: CACAAAAGAGCCTGACACTGGGCTGGGTAACTGCCATCTTGCTGTTACAGATGGCCATTGCAGACCGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS CCA 72 bp | TCTTTTGCCAGCCTGGCAGTGGCACCTGATGGATTTTaGAGTAGGTCTTCAGACGGTACCTGCTCCTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SFASLAVAPDGF*SRSSDGTCSCG Trigger: GCCACAGGAGCAGGTACCGTCTGAAGACCTACTCCAAAATCCATCAGGTGCCACTGCCAGGCTGGCAAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS TCA 72 bp | GGCCCAACAGCAAACTCAGTGACTTTAGGATGCTTCTaGGCACCAAAGAAGATGACGACACGGGCTTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GPTANSVTLGCF*APKKMTTRASR Trigger: GCGGGAAGCCCGTGTCGTCATCTTCTTTGGTGCTCAGAAGCATCCTAAAGTCACTGAGTTTGCTGTTGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS GCA 72 bp | GGCCTCTGTCAGCGTACGGTAGATGAGGCTGTACTCTaGTTTGGAAATGGGTCTAGATGCCCAGGATGGATC | + |
|
Preference number: 6 (lower is better) Translates to: GLCQRTVDEAVL*FGNGSRCPGWI Trigger: GATCCATCCTGGGCATCTAGACCCATTTCCAAAGCAGAGTACAGCCTCATCTACCGTACGCTGACAGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS CAA 72 bp | ACGACACGGGCTTCCCGCACAGGACTCCTTTCTCCTTaGTCCAGAAAATCTAGCACATCCTCCTTATCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TTRASRTGLLSP*SRKSSTSSLSG Trigger: GCCCGATAAGGAGGATGTGCTAGATTTTCTGGACAAAGGAGAAAGGAGTCCTGTGCGGGAAGCCCGTGTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS CCA 72 bp | CCAAGAGACACCTTGCTTCTTTTGCCAGCCTGGCAGTaGCACCTGATGGATTTTGGAGTAGGTCTTCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: PRDTLLLLPAWQ*HLMDFGVGLQT Trigger: CGTCTGAAGACCTACTCCAAAATCCATCAGGTGCCACTGCCAGGCTGGCAAAAGAAGCAAGGTGTCTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS CCA 72 bp | CCTGGTCCAAGAGACACCTTGCTTCTTTTGCCAGCCTaGCAGTGGCACCTGATGGATTTTGGAGTAGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PGPRDTLLLLPA*QWHLMDFGVGL Trigger: AAGACCTACTCCAAAATCCATCAGGTGCCACTGCCAGGCTGGCAAAAGAAGCAAGGTGTCTCTTGGACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS CCA 72 bp | CAGAATCTTGGTACTCGGTCACAGCCAAGGGATACCTaGTCCAAGAGACACCTTGCTTCTTTTGCCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QNLGTRSQPRDT*SKRHLASFASL Trigger: CAGGCTGGCAAAAGAAGCAAGGTGTCTCTTGGACCAGGTATCCCTTGGCTGTGACCGAGTACCAAGATTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS CAA 72 bp | ACATGGGGCTCAGACACTCTGGGTCTAGCCATGCTGTaGGTAGTGGGAAAGTCCTCTGGGATATTGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TWGSDTLGLAML*VVGKSSGILEE Trigger: TTCCTCCAATATCCCAGAGGACTTTCCCACTACCAACAGCATGGCTAGACCCAGAGTGTCTGAGCCCCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
||
| CDS CAA 72 bp | TGCAGATACATGTCCTCCGAACTGTGCCACCGCCTCTaGTACACTGACTTCATATGCAATACGCACACCCCG | + |
|
Preference number: 6 (lower is better) Translates to: CRYMSSELCHRL*YTDFICNTHTP Trigger: CGGGGTGTGCGTATTGCATATGAAGTCAGTGTACAAGAGGCGGTGGCACAGTTCGGAGGACATGTATCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS CAA 72 bp | CAAGGGATACCTGGTCCAAGAGACACCTTGCTTCTTTaGCCAGCCTGGCAGTGGCACCTGATGGATTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: QGIPGPRDTLLL*PAWQWHLMDFG Trigger: TCCAAAATCCATCAGGTGCCACTGCCAGGCTGGCAAAAGAAGCAAGGTGTCTCTTGGACCAGGTATCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS CAA 72 bp | TTGGCTGTAGATGCTGCTGCTGCACTTCTCAGAATCTaGGTACTCGGTCACAGCCAAGGGATACCTGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LAVDAAAALLRI*VLGHSQGIPGP Trigger: TGGACCAGGTATCCCTTGGCTGTGACCGAGTACCAAGATTCTGAGAAGTGCAGCAGCAGCATCTACAGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS CAA 90 bp | AAGAAGATGACGACACGGGCTTCCCGCACAGGACTCCTTTCTCCTTaGTCCAGAAAATCTAGCACATCCTCCTTATCGGGCAGCAGCATT | + |
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Preference number: 6 (lower is better) Translates to: KKMTTRASRTGLLSP*SRKSSTSSLSGSSI Trigger: AATGCTGCTGCCCGATAAGGAGGATGTGCTAGATTTTCTGGACAAAGGAGAAAGGAGTCCTGTGCGGGAAGCCCGTGTCGTCATCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS CAA 90 bp | CTGGGTCTAGCCATGCTGTTGGTAGTGGGAAAGTCCTCTGGGATATaGGAGGAAGAGAAGACTAGGGGCTGCTTTGTGTCCTTGTCAACT | + |
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Preference number: 6 (lower is better) Translates to: LGLAMLLVVGKSSGI*EEEKTRGCFVSLST Trigger: AGTTGACAAGGACACAAAGCAGCCCCTAGTCTTCTCTTCCTCCAATATCCCAGAGGACTTTCCCACTACCAACAGCATGGCTAGACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS CCA 72 bp | CACTTCTCCATCTGCGTATTTCTGAGCCAGTTCCTCTaGGCTGTTGTAGAGCTTGCCGTTATACCAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: HFSICVFLSQFL*AVVELAVIPEL Trigger: CAGCTCTGGTATAACGGCAAGCTCTACAACAGCCCAGAGGAACTGGCTCAGAAATACGCAGATGGAGAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS GCA 72 bp | TTCTTGCCCAAAGTTGGTGTCTCAGATGGCTGCAGCTaGAGCTCCTTTTTGTCCATCAGGAAGTTCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: FLPKVGVSDGCS*SSFLSIRKFCT Trigger: TGTGCAGAACTTCCTGATGGACAAAAAGGAGCTGCAGCTGCAGCCATCTGAGACACCAACTTTGGGCAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS GCA 72 bp | ACTGAGTTCTTGCCCAAAGTTGGTGTCTCAGATGGCTaGAGCTGCAGCTCCTTTTTGTCCATCAGGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: TEFLPKVGVSDG*SCSSFLSIRKF Trigger: GAACTTCCTGATGGACAAAAAGGAGCTGCAGCTGCAGCCATCTGAGACACCAACTTTGGGCAAGAACTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS GCA 72 bp | ACACTGACTTCATATGCAATACGCACACCCCGAAAGTaGACATTCAGGATCTGCAGACCAGAGGAGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: TLTSYAIRTPRK*TFRICRPEEGL Trigger: AAGACCCTCCTCTGGTCTGCAGATCCTGAATGTGCACTTTCGGGGTGTGCGTATTGCATATGAAGTCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS GCA 72 bp | GGGGATCCCAAGGATTATTTTGGCTGTAGATGCTGCTaGTGCACTTCTCAGAATCTTGGTACTCGGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: GDPKDYFGCRCC*CTSQNLGTRSQ Trigger: CTGTGACCGAGTACCAAGATTCTGAGAAGTGCAGCAGCAGCATCTACAGCCAAAATAATCCTTGGGATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS GCA 72 bp | CAGGGGGATCCCAAGGATTATTTTGGCTGTAGATGCTaGTGCTGCACTTCTCAGAATCTTGGTACTCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: QGDPKDYFGCRC*CCTSQNLGTRS Trigger: TGACCGAGTACCAAGATTCTGAGAAGTGCAGCAGCAGCATCTACAGCCAAAATAATCCTTGGGATCCCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS TCA 72 bp | GCTGCAGGAAGTGGCTTTCCATATAGCGTTGCAACATaGACCAGCTACAGCGCTGGTCAGATTTTGTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: AAGSGFPYSVAT*TSYSAGQILCH Trigger: ATGACACAAAATCTGACCAGCGCTGTAGCTGGTTCATGTTGCAACGCTATATGGAAAGCCACTTCCTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS TCA 72 bp | CTAGGGGCTGCTTTGTGTCCTTGTCAACTGACTCCGTaGGTACCAGTATACTCACTTCTCCATCTGCGTATT | + |
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Preference number: 6 (lower is better) Translates to: LGAALCPCQLTP*VPVYSLLHLRI Trigger: AATACGCAGATGGAGAAGTGAGTATACTGGTACTCACGGAGTCAGTTGACAAGGACACAAAGCAGCCCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS TCA 72 bp | GATAGGAGACTGGTCTGTCGGTGTCATAGTGATGAATaGCTTCCAGGAAGGTGGCTGTGTCTGGACAATCAA | + |
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Preference number: 6 (lower is better) Translates to: DRRLVCRCHSDE*LPGRWLCLDNQ Trigger: TTGATTGTCCAGACACAGCCACCTTCCTGGAAGTCATTCATCACTATGACACCGACAGACCAGTCTCCTATC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS CAA 72 bp | TTGGAGGAAGAGAAGACTAGGGGCTGCTTTGTGTCCTaGTCAACTGACTCCGTGAGTACCAGTATACTCACT | + |
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Preference number: 6 (lower is better) Translates to: LEEEKTRGCFVS*STDSVSTSILT Trigger: AGTGAGTATACTGGTACTCACGGAGTCAGTTGACAAGGACACAAAGCAGCCCCTAGTCTTCTCTTCCTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS CAA 90 bp | CATCTCCTCAGGCTGGTAGTAGGTGGCATGGACCAAGCCAGTGGCTaGCATTTTTGCCTTCATTGCTCCATTAGTGTAGAAAACAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: HLLRLVVGGMDQASG*HFCLHCSISVENKV Trigger: GACTTTGTTTTCTACACTAATGGAGCAATGAAGGCAAAAATGCAAGCCACTGGCTTGGTCCATGCCACCTACTACCAGCCTGAGGAGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS TCA 72 bp | GCTCCTTTTTGTCCATCAGGAAGTTCTGCACAATCTTaGTCTCATAAACACTCAGGTCTGCGAATACCCGGG | + |
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Preference number: 6 (lower is better) Translates to: APFCPSGSSAQS*SHKHSGLRIPG Trigger: CCCGGGTATTCGCAGACCTGAGTGTTTATGAGATCAAGATTGTGCAGAACTTCCTGATGGACAAAAAGGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS TCA 72 bp | CTAGCACATCCTCCTTATCGGGCAGCAGCATTTCTATaGGGTATACTGAGTTCTTGCCCAAAGTTGGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LAHPPYRAAAFL*GILSSCPKLVS Trigger: AGACACCAACTTTGGGCAAGAACTCAGTATACCTCATAGAAATGCTGCTGCCCGATAAGGAGGATGTGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS CCA 72 bp | GAGTTGGTGATGTTTTTCCGAATGATCTGCAGTGTCTaGAATCTGTTCTTGGTGCCTGCTACATCCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: ELVMFFRMICSV*NLFLVPATSRS Trigger: TGACCTGGATGTAGCAGGCACCAAGAACAGATTCCAGACACTGCAGATCATTCGGAAAAACATCACCAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS CAA 72 bp | AGCACCAGCATGTGTCCATTTGTCCCTGCACTGGAGTaGAAGTCTTCTCTAAAGTTGGAGTTAAAGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: STSMCPFVPALE*KSSLKLELKWC Trigger: GCACCACTTTAACTCCAACTTTAGAGAAGACTTCAACTCCAGTGCAGGGACAAATGGACACATGCTGGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS TCA 72 bp | CAATGCGGTAATGTACTAGGTGGGTGTGAATGTTGCTaGATACATGGGTGTGTGATTGAGAGATGTAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: QCGNVLGGCECC*IHGCVIERCSA Trigger: TGCGCTACATCTCTCAATCACACACCCATGTATTCAGCAACATTCACACCCACCTAGTACATTACCGCATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS GCA 72 bp | GTAGGTGGCATGGACCAAGCCAGTGGCTTGCATTTTTaGCTTCATTGCTCCATTAGTGTAGAAAACAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: VGGMDQASGLHF*LHCSISVENKV Trigger: GACTTTGTTTTCTACACTAATGGAGCAATGAAGGCAAAAATGCAAGCCACTGGCTTGGTCCATGCCACCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS CAA 72 bp | AGTCCCAAATATAATCATAGTGGAGGACTGATGAGATaGTCCGTAGCACCAGCATGTGTCCATTTGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: SPKYNHSGGLMR*SVAPACVHLSL Trigger: CAGGGACAAATGGACACATGCTGGTGCTACGGACAATCTCATCAGTCCTCCACTATGATTATATTTGGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS GCA 72 bp | AGGTTCTTAGAGTTGGTGATGTTTTTCCGAATGATCTaGAGTGTCTGGAATCTGTTCTTGGTGCCTGCTACA | + |
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Preference number: 6 (lower is better) Translates to: RFLELVMFFRMI*SVWNLFLVPAT Trigger: TGTAGCAGGCACCAAGAACAGATTCCAGACACTGCAGATCATTCGGAAAAACATCACCAACTCTAAGAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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| CDS GCA 72 bp | GAGTTGAAGTCTTCTCTAAAGTTGGAGTTAAAGTGGTaGCTAATTGGCATTTCTGCTGGCATCTCAAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: ELKSSLKLELKW*LIGISAGISKR Trigger: TCTCTTTGAGATGCCAGCAGAAATGCCAATTAGGCACCACTTTAACTCCAACTTTAGAGAAGACTTCAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031837.8 |
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