Pregenerated sensors for DONSON (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022960Ensembl transcript IDs: ENSMUST00000023682.12, ENSMUST00000114031.8, ENSMUST00000117159.8, ENSMUST00000133942.8, ENSMUST00000136699.8, ENSMUST00000138560.2, ENSMUST00000139324.8, ENSMUST00000144461.2, ENSMUST00000145833.8, ENSMUST00000231459.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTAGGGGATATGAGCGCTGTGATCACACTGCTTCCGGCCAGTCCTaGTGCCCGGAACAGGACGGTGAACTGATAGGAGCAGACATAGAA | + |
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Preference number: 1 (lower is better) Translates to: RRGYERCDHTASGQS*CPEQDGELIGADIE Trigger: TTCTATGTCTGCTCCTATCAGTTCACCGTCCTGTTCCGGGCAGCAGGACTGGCCGGAAGCAGTGTGATCACAGCGCTCATATCCCCTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139324.8 |
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| 3UTR CCA 90 bp | GAAGCCAGTAGACCAGAGCCTGCTGGAAGGCGCAGCGCAGCGCAGTaGACAGTTTGGGATCCTGTATACTCTGGGGTAAAGTCACTTCTG | + |
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Preference number: 1 (lower is better) Translates to: EASRPEPAGRRSAAQ*TVWDPVYSGVKSLL Trigger: CAGAAGTGACTTTACCCCAGAGTATACAGGATCCCAAACTGTCCACTGCGCTGCGCTGCGCCTTCCAGCAGGCTCTGGTCTACTGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144461.2 |
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| 3UTR GCA 90 bp | AGGGGATATGAGCGCTGTGATCACACTGCTTCCGGCCAGTCCTGCTaGCCGGAACAGGACGGTGAACTGATAGGAGCAGACATAGAAATA | + |
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Preference number: 1 (lower is better) Translates to: RGYERCDHTASGQSC*PEQDGELIGADIEI Trigger: TATTTCTATGTCTGCTCCTATCAGTTCACCGTCCTGTTCCGGGCAGCAGGACTGGCCGGAAGCAGTGTGATCACAGCGCTCATATCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139324.8 |
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| 3UTR CCA 90 bp | AAGGCGCAGCGCAGCGCAGTGGACAGTTTGGGATCCTGTATACTCTaGGGTAAAGTCACTTCTGTTGCCCTACAATGCTGGACAAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: KAQRSAVDSLGSCIL*GKVTSVALQCWTSP Trigger: AGGACTTGTCCAGCATTGTAGGGCAACAGAAGTGACTTTACCCCAGAGTATACAGGATCCCAAACTGTCCACTGCGCTGCGCTGCGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144461.2 |
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| 3UTR GCA 90 bp | GTAAAGGCAGAGAAAATTCAATACCAGTCGCTCATTAAAGCATGCTaGAGGGTTTCATCAGCTGACCACGGACTTGTCTTTGCAGCCATT | + |
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Preference number: 1 (lower is better) Translates to: VKAEKIQYQSLIKAC*RVSSADHGLVFAAI Trigger: AATGGCTGCAAAGACAAGTCCGTGGTCAGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGACTGGTATTGAATTTTCTCTGCCTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144461.2 |
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| 3UTR CCA 90 bp | TGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATaGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCC | + |
|
Preference number: 1 (lower is better) Translates to: CKHRLPVSILSSKLT*LRAQHLDEVQSSLP Trigger: GGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
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| 3UTR GCA 90 bp | GCAATGAAAGACTTATCAGGTGAGCACTGCCCTGTGACCTGCTCTTaGTTTTACCCTTCAATTACCTTCAATTCACAATTCCTGCAAAGT | + |
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Preference number: 1 (lower is better) Translates to: AMKDLSGEHCPVTCS*FYPSITFNSQFLQS Trigger: ACTTTGCAGGAATTGTGAATTGAAGGTAATTGAAGGGTAAAAGCAAGAGCAGGTCACAGGGCAGTGCTCACCTGATAAGTCTTTCATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGCTATTGGGGATAAGAGAGTGGGTGGGAGACCTGCCTGTGCACCTGAGGATCTTCGTCACTGACTaGCTGCTCCTCCTCAGATTC | + |
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Preference number: 2 (lower is better) Translates to: GRLLGIREWVGDLPVHLRIFVTD*LLLLRF Trigger: GAATCTGAGGAGGAGCAGGCAGTCAGTGACGAAGAT...CCTCAGGTGCACAGGCAGGTCTCCCACCCACTCTCTTATCCCCAATAGCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGGCCTCTGACTGAGCTGCTCCAGGGTTTTAGGATGCAGCCCACAATTAGCATAGAATGCAATGCATaGGGCATGACAGGCCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: HWPLTELLQGFRMQPTISIECNA*GMTGPV Trigger: CACAGGGCCTGTCATGCCTCATGCATTGCATTCTAT...GCTAATTGTGGGCTGCATCCTAAAACCCTGGAGCAGCTCAGTCAGAGGCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 ENSMUST00000145833.8 |
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| 3UTR-3UTR TCA 90 bp | AAATGTAGTCACTCATTTCCACACTCCGCAGGGATGACTTCCCCAGCACTGGCCATAGAATGCAATGCATaGGGCATGACAGGCCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: KCSHSFPHSAGMTSPALAIECNA*GMTGPV Trigger: CACAGGGCCTGTCATGCCTCATGCATTGCATTCTAT...GGCCAGTGCTGGGGAAGTCATCCCTGCGGAGTGTGGAAATGAGTGACTACATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 ENSMUST00000145833.8 |
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| 3UTR-3UTR CCA 90 bp | CACTGGCCTCTGACTGAGCTGCTCCAGGGTTTTAGGATGCAGCCCACAATTAGCCTCAGATTCCAGGCTTaGGTCTCGAACTTTCTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: HWPLTELLQGFRMQPTISLRFQA*VSNFLL Trigger: AAGAAGAAAGTTCGAGACCCAAGCCTGGAATCTGAG...GCTAATTGTGGGCTGCATCCTAAAACCCTGGAGCAGCTCAGTCAGAGGCCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 |
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| 3UTR CAA 90 bp | TGGACAGTTTGGGATCCTGTATACTCTGGGGTAAAGTCACTTCTGTaGCCCTACAATGCTGGACAAGTCCTTGGGCTTCTTCCTGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: WTVWDPVYSGVKSLL*PYNAGQVLGLLPVL Trigger: AAGCACAGGAAGAAGCCCAAGGACTTGTCCAGCATTGTAGGGCAACAGAAGTGACTTTACCCCAGAGTATACAGGATCCCAAACTGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144461.2 |
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| 3UTR-3UTR TCA 90 bp | ATATTCTTCCGAATGAACTTTAAAAGCCAGGGGCCTACGCATCTTGCATTTCCTCCCGGAACAGGACGGTaGACTGATAGGAGCAGACAT | + |
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Preference number: 2 (lower is better) Translates to: IFFRMNFKSQGPTHLAFPPGTGR*TDRSRH Trigger: ATGTCTGCTCCTATCAGTTCACCGTCCTGTTCCGGG...AGGAAATGCAAGATGCGTAGGCCCCTGGCTTTTAAAGTTCATTCGGAAGAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139324.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTCCAACTTAAAATGTAGTCACTCATTTCCACACTCCGCAGGGATGACTTCCCAGGGTTTCATCAGCTaGCCACGGACTTGTCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: ISNLKCSHSFPHSAGMTSQGFIS*PRTCLC Trigger: GCAAAGACAAGTCCGTGGTCAGCTGATGAAACCCTG...GGAAGTCATCCCTGCGGAGTGTGGAAATGAGTGACTACATTTTAAGTTGGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144461.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAACTTAAAATGTAGTCACTCATTTCCACACTCCGCAGGGATGACTTCCCCATCTGTTGCCCTACAATaGTGGACAAGTCCTTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SNLKCSHSFPHSAGMTSPSVALQ*WTSPWA Trigger: AGCCCAAGGACTTGTCCAGCATTGTAGGGCAACAGA...TGGGGAAGTCATCCCTGCGGAGTGTGGAAATGAGTGACTACATTTTAAGTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144461.2 |
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| 3UTR CAA 90 bp | TGTTATCTGAGAACTTGGGAATTTGTTAAGACAGCAGGCACTGACTaGATAGAAGGCTTCGCCTATCTCCCTTTGTGTTTTGGGGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: CYLRTWEFVKTAGTD*IEGFAYLPLCFGGH Trigger: ATGGCCCCCAAAACACAAAGGGAGATAGGCGAAGCCTTCTATCAAGTCAGTGCCTGCTGTCTTAACAAATTCCCAAGTTCTCAGATAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231459.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTGACTTGATTAAGGAAGCTCCTTaGATCTTCATCTCTGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: WLRAQHLDEVQSSLPSDLIKEAP*IFISEN Trigger: ATTTTCAGAGATGAAGATGCAAGGAGCTTCCTTAAT...CAAGTCAGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
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| 3UTR-3UTR GCA 90 bp | ATATTCTTCCGAATGAACTTTAAAAGCCAGGGGCCTACGCATCTTGCATTTCCTATCTTCGTCACTGACTaGCTGCTCCTCCTCAGATTC | + |
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Preference number: 2 (lower is better) Translates to: IFFRMNFKSQGPTHLAFPIFVTD*LLLLRF Trigger: GAATCTGAGGAGGAGCAGGCAGTCAGTGACGAAGAT...AGGAAATGCAAGATGCGTAGGCCCCTGGCTTTTAAAGTTCATTCGGAAGAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 |
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| 3UTR-3UTR GCA 90 bp | TTGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTATTAAGGAAGCTCCTTaGATCTTCATCTCTGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: LTWLRAQHLDEVQSSLPSIKEAP*IFISEN Trigger: ATTTTCAGAGATGAAGATGCAAGGAGCTTCCTTAAT...AGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTTGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCATTAAGGAAGCTCCTTaGATCTTCATCTCTGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: KLTWLRAQHLDEVQSSLPIKEAP*IFISEN Trigger: ATTTTCAGAGATGAAGATGCAAGGAGCTTCCTTAAT...GGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
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| 3UTR CAA 90 bp | CACACATGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTaGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: HTCKHRLPVSILSSK*TWLRAQHLDEVQSS Trigger: GCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCATGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGATAGAGATCACGTCTGGCTTCTTAATTTGATCTTGCACGCCTATCTCTTCGGATCCTGTATACTCTaGGGTAAAGTCACTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: LDRDHVWLLNLILHAYLFGSCIL*GKVTSV Trigger: AACAGAAGTGACTTTACCCCAGAGTATACAGGATCC...GAAGAGATAGGCGTGCAAGATCAAATTAAGAAGCCAGACGTGATCTCTATCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144461.2 |
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| 3UTR-3UTR CCA 90 bp | CACACATGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTCAGATTCCAGGCTTaGGTCTCGAACTTTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: HTCKHRLPVSILSSKLTWLRFQA*VSNFLL Trigger: AAGAAGAAAGTTCGAGACCCAAGCCTGGAATCTGAG...CCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCATGTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139324.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAGATGTTATCTGAGAACTTGGGAATTTGTTAAGACAGCAGGCACTGACTTGTCTCCCTTTGTGTTTTaGGGGCCATACTCTTTATTT | + |
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Preference number: 2 (lower is better) Translates to: GRCYLRTWEFVKTAGTDLSPFVF*GPYSLF Trigger: AAATAAAGAGTATGGCCCCCAAAACACAAAGGGAGA...CAAGTCAGTGCCTGCTGTCTTAACAAATTCCCAAGTTCTCAGATAACATCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231459.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGATTAAGGAAGCTCCTTaGATCTTCATCTCTGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: CKHRLPVSILSSKLTWLRIKEAP*IFISEN Trigger: ATTTTCAGAGATGAAGATGCAAGGAGCTTCCTTAAT...CCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
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| 3UTR-3UTR GCA 90 bp | GCTACAGGTAGTCTGTTTCTCAATTGTAATAAAACACTGACTTTTCTACTCAGGATTAAGGAAGCTCCTTaGATCTTCATCTCTGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: ATGSLFLNCNKTLTFLLRIKEAP*IFISEN Trigger: ATTTTCAGAGATGAAGATGCAAGGAGCTTCCTTAAT...CCTGAGTAGAAAAGTCAGTGTTTTATTACAATTGAGAAACAGACTACCTGTAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 7 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 ENSMUST00000145833.8 |
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| 3UTR-3UTR CAA 90 bp | CACCTCGGAAGGCTATTGGGGATAAGAGAGTGGGTGGGAGACCTGCCTGTGCACCACCTCGGAAGGCTATaGGGGATAAGAGAGTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: HLGRLLGIREWVGDLPVHHLGRL*GIREWV Trigger: CACCCACTCTCTTATCCCCAATAGCCTTCCGAGGTG...GTGCACAGGCAGGTCTCCCACCCACTCTCTTATCCCCAATAGCCTTCCGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 |
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| 3UTR CCA 72 bp | AGACCAGAGCCTGCTGGAAGGCGCAGCGCAGCGCAGTaGACAGTTTGGGATCCTGTATACTCTGGGGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: RPEPAGRRSAAQ*TVWDPVYSGVK Trigger: CTTTACCCCAGAGTATACAGGATCCCAAACTGTCCACTGCGCTGCGCTGCGCCTTCCAGCAGGCTCTGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144461.2 |
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| 3UTR TCA 72 bp | TGCTTCCGGCCAGTCCTGCTGCCCGGAACAGGACGGTaGACTGATAGGAGCAGACATAGAAATAGGGACAAA | + |
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Preference number: 3 (lower is better) Translates to: CFRPVLLPGTGR*TDRSRHRNRDK Trigger: TTTGTCCCTATTTCTATGTCTGCTCCTATCAGTTCACCGTCCTGTTCCGGGCAGCAGGACTGGCCGGAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139324.8 |
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| 3UTR CCA 72 bp | CGCAGCGCAGTGGACAGTTTGGGATCCTGTATACTCTaGGGTAAAGTCACTTCTGTTGCCCTACAATGCTGG | + |
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Preference number: 3 (lower is better) Translates to: RSAVDSLGSCIL*GKVTSVALQCW Trigger: CCAGCATTGTAGGGCAACAGAAGTGACTTTACCCCAGAGTATACAGGATCCCAAACTGTCCACTGCGCTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144461.2 |
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| 3UTR CCA 72 bp | TTTATCCAGAGACAGGCCAACATTGAAAACTGCAGTTaGCTCGTGTGCATACAGTCCTGCAGAGAAGGACCC | + |
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Preference number: 3 (lower is better) Translates to: FIQRQANIENCS*LVCIQSCREGP Trigger: GGGTCCTTCTCTGCAGGACTGTATGCACACGAGCCAACTGCAGTTTTCAATGTTGGCCTGTCTCTGGATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 ENSMUST00000145833.8 |
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| 3UTR GCA 72 bp | TTCTCTGCTGCAATGAAAGACTTATCAGGTGAGCACTaGCCTGTGACCTGCTCTTGCTTTTACCCTTCAATT | + |
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Preference number: 3 (lower is better) Translates to: FSAAMKDLSGEH*PVTCSCFYPSI Trigger: AATTGAAGGGTAAAAGCAAGAGCAGGTCACAGGGCAGTGCTCACCTGATAAGTCTTTCATTGCAGCAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
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| 3UTR GCA 72 bp | GACTTATCAGGTGAGCACTGCCCTGTGACCTGCTCTTaGTTTTACCCTTCAATTACCTTCAATTCACAATTC | + |
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Preference number: 3 (lower is better) Translates to: DLSGEHCPVTCS*FYPSITFNSQF Trigger: GAATTGTGAATTGAAGGTAATTGAAGGGTAAAAGCAAGAGCAGGTCACAGGGCAGTGCTCACCTGATAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
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| 3UTR GCA 72 bp | GAGAAAATTCAATACCAGTCGCTCATTAAAGCATGCTaGAGGGTTTCATCAGCTGACCACGGACTTGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: EKIQYQSLIKAC*RVSSADHGLVF Trigger: AAAGACAAGTCCGTGGTCAGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGACTGGTATTGAATTTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144461.2 |
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| 3UTR-3UTR CAA 90 bp | TGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGAGCCTCCCCTCTGACTaGACACAGAAGATGAACATA | + |
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Preference number: 3 (lower is better) Translates to: CKHRLPVSILSSKLTWLRSLPSD*TQKMNI Trigger: TATGTTCATCTTCTGTGTCAAGTCAGAGGGGAGGCT...CCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
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| 3UTR GCA 72 bp | ATGAAAGACTTATCAGGTGAGCACTGCCCTGTGACCTaGTCTTGCTTTTACCCTTCAATTACCTTCAATTCA | + |
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Preference number: 3 (lower is better) Translates to: MKDLSGEHCPVT*SCFYPSITFNS Trigger: TGAATTGAAGGTAATTGAAGGGTAAAAGCAAGAGCAGGTCACAGGGCAGTGCTCACCTGATAAGTCTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
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| 3UTR-3UTR CAA 90 bp | CACACATGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGTCATTTCCCTACGTCTaGAAAGAACTCACTGCTCGT | + |
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Preference number: 3 (lower is better) Translates to: HTCKHRLPVSILSSKLTWSFPYV*KELTAR Trigger: ACGAGCAGTGAGTTCTTTCAAGACGTAGGGAAATGA...CCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCATGTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
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| CDS-3UTR TCA 90 bp | TGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTGACTTGCCCAGCACTGGCCTCTaGCTGAGCTGCTCCAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: WLRAQHLDEVQSSLPSDLPSTGL*LSCSRV Trigger: AACCCTGGAGCAGCTCAGTCAGAGGCCAGTGCTGGG...CAAGTCAGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
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| CDS-3UTR TCA 90 bp | GGAAGGCTATTGGGGATAAGAGAGTGGGTGGGAGACCTGCCTGTGCACCTGAGGCAGGGTTTCATCAGCTaGCCACGGACTTGTCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: GRLLGIREWVGDLPVHLRQGFIS*PRTCLC Trigger: GCAAAGACAAGTCCGTGGTCAGCTGATGAAACCCTG...CCTCAGGTGCACAGGCAGGTCTCCCACCCACTCTCTTATCCCCAATAGCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136699.8 |
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| CDS-3UTR TCA 90 bp | CACTGGCCTCTGACTGAGCTGCTCCAGGGTTTTAGGATGCAGCCCACAATTAGCCAGGGTTTCATCAGCTaGCCACGGACTTGTCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: HWPLTELLQGFRMQPTISQGFIS*PRTCLC Trigger: GCAAAGACAAGTCCGTGGTCAGCTGATGAAACCCTG...GCTAATTGTGGGCTGCATCCTAAAACCCTGGAGCAGCTCAGTCAGAGGCCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136699.8 ENSMUST00000145833.8 |
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| CDS-3UTR GCA 90 bp | GGAAGGCTATTGGGGATAAGAGAGTGGGTGGGAGACCTGCCTGTGCACCTGAGGTTGGGCTTCTTCCTGTaGTTTCAGATGATCTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GRLLGIREWVGDLPVHLRLGFFL*FQMICP Trigger: TGGGCAGATCATCTGAAAGCACAGGAAGAAGCCCAA...CCTCAGGTGCACAGGCAGGTCTCCCACCCACTCTCTTATCCCCAATAGCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 |
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| CDS-3UTR CCA 90 bp | TGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTGACTTGTTGGGGATAAGAGAGTaGGTGGGAGACCTGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: WLRAQHLDEVQSSLPSDLLGIRE*VGDLPV Trigger: CACAGGCAGGTCTCCCACCCACTCTCTTATCCCCAA...CAAGTCAGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
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| CDS-3UTR TCA 90 bp | CACTGGCCTCTGACTGAGCTGCTCCAGGGTTTTAGGATGCAGCCCACAATTAGCGTGCCAGTTCTTTCATaGGATGATGTGTCCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: HWPLTELLQGFRMQPTISVPVLS*DDVSSH Trigger: GTGGGAGGACACATCATCTCATGAAAGAACTGGCAC...GCTAATTGTGGGCTGCATCCTAAAACCCTGGAGCAGCTCAGTCAGAGGCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 ENSMUST00000145833.8 |
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| CDS-3UTR TCA 90 bp | TTGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTCCCGGAACAGGACGGTaGACTGATAGGAGCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LTWLRAQHLDEVQSSLPSPGTGR*TDRSRH Trigger: ATGTCTGCTCCTATCAGTTCACCGTCCTGTTCCGGG...AGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | TTGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTCTTCATCTTCGTCACTaGCTGCCTGCTCCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTWLRAQHLDEVQSSLPSLHLRH*LPAPPQ Trigger: CTGAGGAGGAGCAGGCAGTCAGTGACGAAGATGAAG...AGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGCTATTGGGGATAAGAGAGTGGGTGGGAGACCTGCCTGTGCACCTGAGGTGCTTTCAGATGATCTaGCCAGGAAAAGGGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRLLGIREWVGDLPVHLRCFQMI*PGKGLR Trigger: TCTCAACCCTTTTCCTGGGCAGATCATCTGAAAGCA...CCTCAGGTGCACAGGCAGGTCTCCCACCCACTCTCTTATCCCCAATAGCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 |
||
| CDS-3UTR CCA 90 bp | TTGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTTTGGGGATAAGAGAGTaGGTGGGAGACCTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTWLRAQHLDEVQSSLPSLGIRE*VGDLPV Trigger: CACAGGCAGGTCTCCCACCCACTCTCTTATCCCCAA...AGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTGACTTGGTGCCAGTTCTTTCATaGGATGATGTGTCCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WLRAQHLDEVQSSLPSDLVPVLS*DDVSSH Trigger: GTGGGAGGACACATCATCTCATGAAAGAACTGGCAC...CAAGTCAGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
||
| CDS-3UTR TCA 90 bp | TTCGTCACTGACTGCCTGCTCCTCCTCAGATTCCAGGCTTGGGTCTCGAACTTTGTGCCAGTTCTTTCATaGGATGATGTGTCCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FVTDCLLLLRFQAWVSNFVPVLS*DDVSSH Trigger: GTGGGAGGACACATCATCTCATGAAAGAACTGGCAC...AAAGTTCGAGACCCAAGCCTGGAATCTGAGGAGGAGCAGGCAGTCAGTGACGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 |
||
| CDS-3UTR TCA 90 bp | AACTTCTCTGCTGCAATGAAAGACTTATCAGGTGAGCACTGCCCTGTGACCTGCCTTCATCTTCGTCACTaGCTGCCTGCTCCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NFSAAMKDLSGEHCPVTCLHLRH*LPAPPQ Trigger: CTGAGGAGGAGCAGGCAGTCAGTGACGAAGATGAAG...GCAGGTCACAGGGCAGTGCTCACCTGATAAGTCTTTCATTGCAGCAGAGAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
||
| CDS-3UTR TCA 90 bp | TTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGGCCCAGCACTTACACACTCCGCAGGGATaGCTTCCCCAGCACTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPVSILSSKLTWLRAQHLHTPQG*LPQHWP Trigger: AGGCCAGTGCTGGGGAAGTCATCCCTGCGGAGTGTG...TAAGTGCTGGGCCCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR CCA 90 bp | AAATGTAGTCACTCATTTCCACACTCCGCAGGGATGACTTCCCCAGCACTGGCCAATTCTAGGGAAGAGTaGCAGCCACGAAAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KCSHSFPHSAGMTSPALANSREE*QPRKGR Trigger: CCTGCCTTTTCGTGGCTGCCACTCTTCCCTAGAATT...GGCCAGTGCTGGGGAAGTCATCCCTGCGGAGTGTGGAAATGAGTGACTACATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136699.8 ENSMUST00000145833.8 |
||
| CDS-3UTR CCA 90 bp | AACTTCTCTGCTGCAATGAAAGACTTATCAGGTGAGCACTGCCCTGTGACCTGCTTGGGGATAAGAGAGTaGGTGGGAGACCTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NFSAAMKDLSGEHCPVTCLGIRE*VGDLPV Trigger: CACAGGCAGGTCTCCCACCCACTCTCTTATCCCCAA...GCAGGTCACAGGGCAGTGCTCACCTGATAAGTCTTTCATTGCAGCAGAGAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCGAGACAGGCCAACATTaGAAACTGCAGTTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KLTWLRAQHLDEVQSSLPETGQH*KLQLAR Trigger: ACGAGCCAACTGCAGTTTTCAATGTTGGCCTGTCTC...GGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023682.12 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGATGTTATCTGAGAACTTGGGAATTTGTTAAGACAGCAGGCACTGACTTGCCCAGCACTGGCCTCTaGCTGAGCTGCTCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRCYLRTWEFVKTAGTDLPSTGL*LSCSRV Trigger: AACCCTGGAGCAGCTCAGTCAGAGGCCAGTGCTGGG...CAAGTCAGTGCCTGCTGTCTTAACAAATTCCCAAGTTCTCAGATAACATCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231459.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGATGTTATCTGAGAACTTGGGAATTTGTTAAGACAGCAGGCACTGACTTGCACACTCCGCAGGGATaGCTTCCCCAGCACTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRCYLRTWEFVKTAGTDLHTPQG*LPQHWP Trigger: AGGCCAGTGCTGGGGAAGTCATCCCTGCGGAGTGTG...CAAGTCAGTGCCTGCTGTCTTAACAAATTCCCAAGTTCTCAGATAACATCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231459.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCAATTCTAGGGAAGAGTaGCAGCCACGAAAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLTWLRAQHLDEVQSSLPNSREE*QPRKGR Trigger: CCTGCCTTTTCGTGGCTGCCACTCTTCCCTAGAATT...GGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | TTCGTCACTGACTGCCTGCTCCTCCTCAGATTCCAGGCTTGGGTCTCGAACTTTAGTTCTTTCATGAGATaGTGTGTCCTCCCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FVTDCLLLLRFQAWVSNFSSFMR*CVLPQQ Trigger: TTGCTGTGGGAGGACACATCATCTCATGAAAGAACT...AAAGTTCGAGACCCAAGCCTGGAATCTGAGGAGGAGCAGGCAGTCAGTGACGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 |
||
| CDS-3UTR TCA 90 bp | TGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGCCCAGCACTGGCCTCTaGCTGAGCTGCTCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CKHRLPVSILSSKLTWLRPSTGL*LSCSRV Trigger: AACCCTGGAGCAGCTCAGTCAGAGGCCAGTGCTGGG...CCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | TCTGACTTGACACAGAAGATGAACATACGTGAGAGCAGAGGAACTAGAAATCATCACACTCCGCAGGGATaGCTTCCCCAGCACTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SDLTQKMNIRESRGTRNHHTPQG*LPQHWP Trigger: AGGCCAGTGCTGGGGAAGTCATCCCTGCGGAGTGTG...ATGATTTCTAGTTCCTCTGCTCTCACGTATGTTCATCTTCTGTGTCAAGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGCACACTCCGCAGGGATaGCTTCCCCAGCACTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CKHRLPVSILSSKLTWLRHTPQG*LPQHWP Trigger: AGGCCAGTGCTGGGGAAGTCATCCCTGCGGAGTGTG...CCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR GCA 90 bp | AAATGTAGTCACTCATTTCCACACTCCGCAGGGATGACTTCCCCAGCACTGGCCTGCTTTCAGATGATCTaGCCAGGAAAAGGGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KCSHSFPHSAGMTSPALACFQMI*PGKGLR Trigger: TCTCAACCCTTTTCCTGGGCAGATCATCTGAAAGCA...GGCCAGTGCTGGGGAAGTCATCCCTGCGGAGTGTGGAAATGAGTGACTACATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000145833.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCCCACGGACTTGTCTTTaGAGCCATTTTCCTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLTWLRAQHLDEVQSSLPPRTCL*SHFPIS Trigger: GCTGATAGGAAAATGGCTGCAAAGACAAGTCCGTGG...GGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAACTT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTGACTTGTCGCTCATTAAAGCATaGTGCAGGGTTTCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WLRAQHLDEVQSSLPSDLSLIKA*CRVSSA Trigger: AGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGA...CAAGTCAGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR GCA 90 bp | AACTTCTCTGCTGCAATGAAAGACTTATCAGGTGAGCACTGCCCTGTGACCTGCATCTTCGTCACTGACTaGCTGCTCCTCCTCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: NFSAAMKDLSGEHCPVTCIFVTD*LLLLRF Trigger: GAATCTGAGGAGGAGCAGGCAGTCAGTGACGAAGAT...GCAGGTCACAGGGCAGTGCTCACCTGATAAGTCTTTCATTGCAGCAGAGAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
||
| CDS-3UTR TCA 90 bp | TTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGGCCCAGCACTTACCCGGAACAGGACGGTaGACTGATAGGAGCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LPVSILSSKLTWLRAQHLPGTGR*TDRSRH Trigger: ATGTCTGCTCCTATCAGTTCACCGTCCTGTTCCGGG...TAAGTGCTGGGCCCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | CACACATGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCCCAGCACTGGCCTCTaGCTGAGCTGCTCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTCKHRLPVSILSSKLTWPSTGL*LSCSRV Trigger: AACCCTGGAGCAGCTCAGTCAGAGGCCAGTGCTGGG...CCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCATGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGCTCTTGCTTTTACCCTTCAATTACCTTCAATTCACAATTCCTGCAAAGTCCCAGCACTGGCCTCTaGCTGAGCTGCTCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TCSCFYPSITFNSQFLQSPSTGL*LSCSRV Trigger: AACCCTGGAGCAGCTCAGTCAGAGGCCAGTGCTGGG...ACTTTGCAGGAATTGTGAATTGAAGGTAATTGAAGGGTAAAAGCAAGAGCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGCTCTTGCTTTTACCCTTCAATTACCTTCAATTCACAATTCCTGCAAAGTCACACTCCGCAGGGATaGCTTCCCCAGCACTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TCSCFYPSITFNSQFLQSHTPQG*LPQHWP Trigger: AGGCCAGTGCTGGGGAAGTCATCCCTGCGGAGTGTG...ACTTTGCAGGAATTGTGAATTGAAGGTAATTGAAGGGTAAAAGCAAGAGCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCTCAGATTCCAGGCTTGGGTCTCGAACTTTCTTCTTATGGCCAATTTCTTGTGCCAGTTCTTTCATaGGATGATGTGTCCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPQIPGLGLELSSYGQFLVPVLS*DDVSSH Trigger: GTGGGAGGACACATCATCTCATGAAAGAACTGGCAC...AAGAAATTGGCCATAAGAAGAAAGTTCGAGACCCAAGCCTGGAATCTGAGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 |
||
| CDS-3UTR GCA 90 bp | AACTTCTCTGCTGCAATGAAAGACTTATCAGGTGAGCACTGCCCTGTGACCTGCTCGCTCATTAAAGCATaGTGCAGGGTTTCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NFSAAMKDLSGEHCPVTCSLIKA*CRVSSA Trigger: AGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGA...GCAGGTCACAGGGCAGTGCTCACCTGATAAGTCTTTCATTGCAGCAGAGAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
||
| CDS-3UTR CCA 90 bp | TTGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTCAGACCTGTATACTCTaGGGTAAAGTCACTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTWLRAQHLDEVQSSLPSQTCIL*GKVTSV Trigger: AACAGAAGTGACTTTACCCCAGAGTATACAGGTCTG...AGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139324.8 |
||
| CDS-3UTR TCA 90 bp | AGGATCTCCAACTTAAAATGTAGTCACTCATTTCCACACTCCGCAGGGATGACTGTGCCAGTTCTTTCATaGGATGATGTGTCCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RISNLKCSHSFPHSAGMTVPVLS*DDVSSH Trigger: GTGGGAGGACACATCATCTCATGAAAGAACTGGCAC...AGTCATCCCTGCGGAGTGTGGAAATGAGTGACTACATTTTAAGTTGGAGATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 ENSMUST00000145833.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGCCCGGAACAGGACGGTaGACTGATAGGAGCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: CKHRLPVSILSSKLTWLRPGTGR*TDRSRH Trigger: ATGTCTGCTCCTATCAGTTCACCGTCCTGTTCCGGG...CCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | TCTGACTTGACACAGAAGATGAACATACGTGAGAGCAGAGGAACTAGAAATCATCTTCATCTTCGTCACTaGCTGCCTGCTCCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SDLTQKMNIRESRGTRNHLHLRH*LPAPPQ Trigger: CTGAGGAGGAGCAGGCAGTCAGTGACGAAGATGAAG...ATGATTTCTAGTTCCTCTGCTCTCACGTATGTTCATCTTCTGTGTCAAGTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR GCA 90 bp | AGGATCTCCAACTTAAAATGTAGTCACTCATTTCCACACTCCGCAGGGATGACTTCTGTTGCCCTACAATaGTGGACAAGTCCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RISNLKCSHSFPHSAGMTSVALQ*WTSPWA Trigger: AGCCCAAGGACTTGTCCAGCATTGTAGGGCAACAGA...AGTCATCCCTGCGGAGTGTGGAAATGAGTGACTACATTTTAAGTTGGAGATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000145833.8 |
||
| CDS-3UTR GCA 90 bp | TCTTGCACGCCTATCTCTTCCAGCCAAGAAAAACTCTCCTCTTCATCTTCGTCACCACGGACTTGTCTTTaGAGCCATTTTCCTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCTPISSSQEKLSSSSSSPRTCL*SHFPIS Trigger: GCTGATAGGAAAATGGCTGCAAAGACAAGTCCGTGG...TGACGAAGATGAAGAGGAGAGTTTTTCTTGGCTGGAAGAGATAGGCGTGCAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136699.8 |
||
| CDS-3UTR GCA 90 bp | TTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGGCCCAGCACTTAATCTTCGTCACTGACTaGCTGCTCCTCCTCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LPVSILSSKLTWLRAQHLIFVTD*LLLLRF Trigger: GAATCTGAGGAGGAGCAGGCAGTCAGTGACGAAGAT...TAAGTGCTGGGCCCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR CCA 90 bp | TTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGGCCCAGCACTTAAATTCTAGGGAAGAGTaGCAGCCACGAAAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPVSILSSKLTWLRAQHLNSREE*QPRKGR Trigger: CCTGCCTTTTCGTGGCTGCCACTCTTCCCTAGAATT...TAAGTGCTGGGCCCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | TCCAACTTAAAATGTAGTCACTCATTTCCACACTCCGCAGGGATGACTTCCCCAAGTTCTTTCATGAGATaGTGTGTCCTCCCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SNLKCSHSFPHSAGMTSPSSFMR*CVLPQQ Trigger: TTGCTGTGGGAGGACACATCATCTCATGAAAGAACT...TGGGGAAGTCATCCCTGCGGAGTGTGGAAATGAGTGACTACATTTTAAGTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 ENSMUST00000145833.8 |
||
| CDS-3UTR TCA 90 bp | ATATTCTTCCGAATGAACTTTAAAAGCCAGGGGCCTACGCATCTTGCATTTCCTGTGCCAGTTCTTTCATaGGATGATGTGTCCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IFFRMNFKSQGPTHLAFPVPVLS*DDVSSH Trigger: GTGGGAGGACACATCATCTCATGAAAGAACTGGCAC...AGGAAATGCAAGATGCGTAGGCCCCTGGCTTTTAAAGTTCATTCGGAAGAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 ENSMUST00000145833.8 |
||
| CDS-3UTR TCA 90 bp | TCTGACTTGACACAGAAGATGAACATACGTGAGAGCAGAGGAACTAGAAATCATCAGGGTTTCATCAGCTaGCCACGGACTTGTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SDLTQKMNIRESRGTRNHQGFIS*PRTCLC Trigger: GCAAAGACAAGTCCGTGGTCAGCTGATGAAACCCTG...ATGATTTCTAGTTCCTCTGCTCTCACGTATGTTCATCTTCTGTGTCAAGTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | TTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGGCCCAGCACTTAGGTTATACAGAGATGTaGAACTCACAGACCAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPVSILSSKLTWLRAQHLGYTEM*NSQTSR Trigger: GCGACTGGTCTGTGAGTTTCACATCTCTGTATAACC...TAAGTGCTGGGCCCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGCTCTTGCTTTTACCCTTCAATTACCTTCAATTCACAATTCCTGCAAAGTCCCGGAACAGGACGGTaGACTGATAGGAGCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: TCSCFYPSITFNSQFLQSPGTGR*TDRSRH Trigger: ATGTCTGCTCCTATCAGTTCACCGTCCTGTTCCGGG...ACTTTGCAGGAATTGTGAATTGAAGGTAATTGAAGGGTAAAAGCAAGAGCAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGATGTTATCTGAGAACTTGGGAATTTGTTAAGACAGCAGGCACTGACTTGATAGAATGCAATGCATaGGGCATGACAGGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRCYLRTWEFVKTAGTDLIECNA*GMTGPV Trigger: CACAGGGCCTGTCATGCCTCATGCATTGCATTCTAT...CAAGTCAGTGCCTGCTGTCTTAACAAATTCCCAAGTTCTCAGATAACATCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231459.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGATGTTATCTGAGAACTTGGGAATTTGTTAAGACAGCAGGCACTGACTTGGAGACAGGCCAACATTaGAAACTGCAGTTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GRCYLRTWEFVKTAGTDLETGQH*KLQLAR Trigger: ACGAGCCAACTGCAGTTTTCAATGTTGGCCTGTCTC...CAAGTCAGTGCCTGCTGTCTTAACAAATTCCCAAGTTCTCAGATAACATCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231459.2 |
||
| CDS-3UTR GCA 90 bp | TTGATCTTGCACGCCTATCTCTTCCAGCCAAGAAAAACTCTCCTCTTCATCTTCTTGGGCTTCTTCCTGTaGTTTCAGATGATCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LILHAYLFQPRKTLLFIFLGFFL*FQMICP Trigger: TGGGCAGATCATCTGAAAGCACAGGAAGAAGCCCAA...GAAGATGAAGAGGAGAGTTTTTCTTGGCTGGAAGAGATAGGCGTGCAAGATCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCCAACTTAAAATGTAGTCACTCATTTCCACACTCCGCAGGGATGACTTCCTTGGGCTTCTTCCTGTaGTTTCAGATGATCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISNLKCSHSFPHSAGMTSLGFFL*FQMICP Trigger: TGGGCAGATCATCTGAAAGCACAGGAAGAAGCCCAA...GGAAGTCATCCCTGCGGAGTGTGGAAATGAGTGACTACATTTTAAGTTGGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000145833.8 |
||
| CDS-3UTR GCA 90 bp | ATATTCTTCCGAATGAACTTTAAAAGCCAGGGGCCTACGCATCTTGCATTTCCTTCTGTTGCCCTACAATaGTGGACAAGTCCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IFFRMNFKSQGPTHLAFPSVALQ*WTSPWA Trigger: AGCCCAAGGACTTGTCCAGCATTGTAGGGCAACAGA...AGGAAATGCAAGATGCGTAGGCCCCTGGCTTTTAAAGTTCATTCGGAAGAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000145833.8 |
||
| CDS-3UTR GCA 90 bp | AGGATCTCCAACTTAAAATGTAGTCACTCATTTCCACACTCCGCAGGGATGACTCCACGGACTTGTCTTTaGAGCCATTTTCCTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RISNLKCSHSFPHSAGMTPRTCL*SHFPIS Trigger: GCTGATAGGAAAATGGCTGCAAAGACAAGTCCGTGG...AGTCATCCCTGCGGAGTGTGGAAATGAGTGACTACATTTTAAGTTGGAGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136699.8 ENSMUST00000145833.8 |
||
| 3UTR CAA 72 bp | CACTTAGATGAAGTACAAAGTAGCCTCCCCTCTGACTaGACACAGAAGATGAACATACGTGAGAGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLDEVQSSLPSD*TQKMNIRESRG Trigger: TCCTCTGCTCTCACGTATGTTCATCTTCTGTGTCAAGTCAGAGGGGAGGCTACTTTGTACTTCATCTAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
||
| CDS-3UTR TCA 90 bp | TCTGACTTGACACAGAAGATGAACATACGTGAGAGCAGAGGAACTAGAAATCATGTGCCAGTTCTTTCATaGGATGATGTGTCCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SDLTQKMNIRESRGTRNHVPVLS*DDVSSH Trigger: GTGGGAGGACACATCATCTCATGAAAGAACTGGCAC...ATGATTTCTAGTTCCTCTGCTCTCACGTATGTTCATCTTCTGTGTCAAGTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
||
| CDS-3UTR TCA 90 bp | CACACATGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCAGGGTTTCATCAGCTaGCCACGGACTTGTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HTCKHRLPVSILSSKLTWQGFIS*PRTCLC Trigger: GCAAAGACAAGTCCGTGGTCAGCTGATGAAACCCTG...CCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCATGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGCTCTTGCTTTTACCCTTCAATTACCTTCAATTCACAATTCCTGCAAAGTCAGGGTTTCATCAGCTaGCCACGGACTTGTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TCSCFYPSITFNSQFLQSQGFIS*PRTCLC Trigger: GCAAAGACAAGTCCGTGGTCAGCTGATGAAACCCTG...ACTTTGCAGGAATTGTGAATTGAAGGTAATTGAAGGGTAAAAGCAAGAGCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
||
| CDS-3UTR TCA 90 bp | GCTACAGGTAGTCTGTTTCTCAATTGTAATAAAACACTGACTTTTCTACTCAGGCTTCATCTTCGTCACTaGCTGCCTGCTCCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATGSLFLNCNKTLTFLLRLHLRH*LPAPPQ Trigger: CTGAGGAGGAGCAGGCAGTCAGTGACGAAGATGAAG...CCTGAGTAGAAAAGTCAGTGTTTTATTACAATTGAGAAACAGACTACCTGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGATAGAATGCAATGCATaGGGCATGACAGGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CKHRLPVSILSSKLTWLRIECNA*GMTGPV Trigger: CACAGGGCCTGTCATGCCTCATGCATTGCATTCTAT...CCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023682.12 |
||
| CDS-3UTR TCA 90 bp | TCTGACTTGACACAGAAGATGAACATACGTGAGAGCAGAGGAACTAGAAATCATGAGACAGGCCAACATTaGAAACTGCAGTTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SDLTQKMNIRESRGTRNHETGQH*KLQLAR Trigger: ACGAGCCAACTGCAGTTTTCAATGTTGGCCTGTCTC...ATGATTTCTAGTTCCTCTGCTCTCACGTATGTTCATCTTCTGTGTCAAGTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023682.12 ENSMUST00000117159.8 |
||
| CDS-3UTR GCA 90 bp | TTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGGCCCAGCACTTATGCTTTCAGATGATCTaGCCAGGAAAAGGGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPVSILSSKLTWLRAQHLCFQMI*PGKGLR Trigger: TCTCAACCCTTTTCCTGGGCAGATCATCTGAAAGCA...TAAGTGCTGGGCCCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGTCTGTTGCCCTACAATaGTGGACAAGTCCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CKHRLPVSILSSKLTWLRSVALQ*WTSPWA Trigger: AGCCCAAGGACTTGTCCAGCATTGTAGGGCAACAGA...CCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
||
| CDS-3UTR GCA 90 bp | TTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGGCCCAGCACTTATCGCTCATTAAAGCATaGTGCAGGGTTTCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPVSILSSKLTWLRAQHLSLIKA*CRVSSA Trigger: AGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGA...TAAGTGCTGGGCCCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR GCA 90 bp | TTGATCTTGCACGCCTATCTCTTCCAGCCAAGAAAAACTCTCCTCTTCATCTTCTCGCTCATTAAAGCATaGTGCAGGGTTTCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LILHAYLFQPRKTLLFIFSLIKA*CRVSSA Trigger: AGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGA...GAAGATGAAGAGGAGAGTTTTTCTTGGCTGGAAGAGATAGGCGTGCAAGATCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136699.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGATCTTCGTCACTGACTaGCTGCTCCTCCTCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: CKHRLPVSILSSKLTWLRIFVTD*LLLLRF Trigger: GAATCTGAGGAGGAGCAGGCAGTCAGTGACGAAGAT...CCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR CCA 90 bp | AACTTCTCTGCTGCAATGAAAGACTTATCAGGTGAGCACTGCCCTGTGACCTGCGATAGAGATCACGTCTaGCTTCTTAATTTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NFSAAMKDLSGEHCPVTCDRDHV*LLNLIL Trigger: CAAGATCAAATTAAGAAGCCAGACGTGATCTCTATC...GCAGGTCACAGGGCAGTGCTCACCTGATAAGTCTTTCATTGCAGCAGAGAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
||
| CDS-3UTR CCA 90 bp | GCTACAGGTAGTCTGTTTCTCAATTGTAATAAAACACTGACTTTTCTACTCAGGTTGGGGATAAGAGAGTaGGTGGGAGACCTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ATGSLFLNCNKTLTFLLRLGIRE*VGDLPV Trigger: CACAGGCAGGTCTCCCACCCACTCTCTTATCCCCAA...CCTGAGTAGAAAAGTCAGTGTTTTATTACAATTGAGAAACAGACTACCTGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | ATATTCTTCCGAATGAACTTTAAAAGCCAGGGGCCTACGCATCTTGCATTTCCTAGTTCTTTCATGAGATaGTGTGTCCTCCCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IFFRMNFKSQGPTHLAFPSSFMR*CVLPQQ Trigger: TTGCTGTGGGAGGACACATCATCTCATGAAAGAACT...AGGAAATGCAAGATGCGTAGGCCCCTGGCTTTTAAAGTTCATTCGGAAGAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 ENSMUST00000145833.8 |
||
| CDS-3UTR TCA 90 bp | GCTACAGGTAGTCTGTTTCTCAATTGTAATAAAACACTGACTTTTCTACTCAGGCAGGGTTTCATCAGCTaGCCACGGACTTGTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ATGSLFLNCNKTLTFLLRQGFIS*PRTCLC Trigger: GCAAAGACAAGTCCGTGGTCAGCTGATGAAACCCTG...CCTGAGTAGAAAAGTCAGTGTTTTATTACAATTGAGAAACAGACTACCTGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000145833.8 |
||
| CDS-3UTR TCA 90 bp | TCTGACTTGACACAGAAGATGAACATACGTGAGAGCAGAGGAACTAGAAATCATGGTTATACAGAGATGTaGAACTCACAGACCAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SDLTQKMNIRESRGTRNHGYTEM*NSQTSR Trigger: GCGACTGGTCTGTGAGTTTCACATCTCTGTATAACC...ATGATTTCTAGTTCCTCTGCTCTCACGTATGTTCATCTTCTGTGTCAAGTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGCTCTTGCTTTTACCCTTCAATTACCTTCAATTCACAATTCCTGCAAAGTATAGAATGCAATGCATaGGGCATGACAGGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TCSCFYPSITFNSQFLQSIECNA*GMTGPV Trigger: CACAGGGCCTGTCATGCCTCATGCATTGCATTCTAT...ACTTTGCAGGAATTGTGAATTGAAGGTAATTGAAGGGTAAAAGCAAGAGCAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGCTCTTGCTTTTACCCTTCAATTACCTTCAATTCACAATTCCTGCAAAGTGAGACAGGCCAACATTaGAAACTGCAGTTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TCSCFYPSITFNSQFLQSETGQH*KLQLAR Trigger: ACGAGCCAACTGCAGTTTTCAATGTTGGCCTGTCTC...ACTTTGCAGGAATTGTGAATTGAAGGTAATTGAAGGGTAAAAGCAAGAGCAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
||
| CDS-3UTR GCA 90 bp | TCTGACTTGACACAGAAGATGAACATACGTGAGAGCAGAGGAACTAGAAATCATTTGGGCTTCTTCCTGTaGTTTCAGATGATCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDLTQKMNIRESRGTRNHLGFFL*FQMICP Trigger: TGGGCAGATCATCTGAAAGCACAGGAAGAAGCCCAA...ATGATTTCTAGTTCCTCTGCTCTCACGTATGTTCATCTTCTGTGTCAAGTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
||
| CDS-3UTR GCA 90 bp | CACACATGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGTCTGTTGCCCTACAATaGTGGACAAGTCCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTCKHRLPVSILSSKLTWSVALQ*WTSPWA Trigger: AGCCCAAGGACTTGTCCAGCATTGTAGGGCAACAGA...CCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCATGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
||
| CDS-3UTR GCA 90 bp | ATATTCTTCCGAATGAACTTTAAAAGCCAGGGGCCTACGCATCTTGCATTTCCTTCGCTCATTAAAGCATaGTGCAGGGTTTCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IFFRMNFKSQGPTHLAFPSLIKA*CRVSSA Trigger: AGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGA...AGGAAATGCAAGATGCGTAGGCCCCTGGCTTTTAAAGTTCATTCGGAAGAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000145833.8 |
||
| CDS-3UTR GCA 90 bp | CACACATGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGATCTTCGTCACTGACTaGCTGCTCCTCCTCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: HTCKHRLPVSILSSKLTWIFVTD*LLLLRF Trigger: GAATCTGAGGAGGAGCAGGCAGTCAGTGACGAAGAT...CCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCATGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR CCA 90 bp | CACACATGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGAATTCTAGGGAAGAGTaGCAGCCACGAAAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTCKHRLPVSILSSKLTWNSREE*QPRKGR Trigger: CCTGCCTTTTCGTGGCTGCCACTCTTCCCTAGAATT...CCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCATGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGCTCTTGCTTTTACCCTTCAATTACCTTCAATTCACAATTCCTGCAAAGTAATTCTAGGGAAGAGTaGCAGCCACGAAAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TCSCFYPSITFNSQFLQSNSREE*QPRKGR Trigger: CCTGCCTTTTCGTGGCTGCCACTCTTCCCTAGAATT...ACTTTGCAGGAATTGTGAATTGAAGGTAATTGAAGGGTAAAAGCAAGAGCAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
||
| 3UTR CAA 72 bp | CTTGATAGAGATCACGTCTGGCTTCTTAATTTGATCTaGCACGCCTATCTCTTCCAGCCAAGAAAAACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LDRDHVWLLNLI*HAYLFQPRKTL Trigger: GAGAGTTTTTCTTGGCTGGAAGAGATAGGCGTGCAAGATCAAATTAAGAAGCCAGACGTGATCTCTATCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 |
||
| 3UTR CAA 72 bp | AGAACTTGGGAATTTGTTAAGACAGCAGGCACTGACTaGATAGAAGGCTTCGCCTATCTCCCTTTGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RTWEFVKTAGTD*IEGFAYLPLCF Trigger: AAAACACAAAGGGAGATAGGCGAAGCCTTCTATCAAGTCAGTGCCTGCTGTCTTAACAAATTCCCAAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231459.2 |
||
| CDS-3UTR GCA 90 bp | TGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGTGCTTTCAGATGATCTaGCCAGGAAAAGGGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CKHRLPVSILSSKLTWLRCFQMI*PGKGLR Trigger: TCTCAACCCTTTTCCTGGGCAGATCATCTGAAAGCA...CCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
||
| CDS-3UTR GCA 90 bp | CACACATGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGTTGGGCTTCTTCCTGTaGTTTCAGATGATCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HTCKHRLPVSILSSKLTWLGFFL*FQMICP Trigger: TGGGCAGATCATCTGAAAGCACAGGAAGAAGCCCAA...CCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCATGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGCTCTTGCTTTTACCCTTCAATTACCTTCAATTCACAATTCCTGCAAAGTCCACGGACTTGTCTTTaGAGCCATTTTCCTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TCSCFYPSITFNSQFLQSPRTCL*SHFPIS Trigger: GCTGATAGGAAAATGGCTGCAAAGACAAGTCCGTGG...ACTTTGCAGGAATTGTGAATTGAAGGTAATTGAAGGGTAAAAGCAAGAGCAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGTCGCTCATTAAAGCATaGTGCAGGGTTTCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CKHRLPVSILSSKLTWLRSLIKA*CRVSSA Trigger: AGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGA...CCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR TCA 90 bp | CACACATGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGAGTTCTTTCATGAGATaGTGTGTCCTCCCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTCKHRLPVSILSSKLTWSSFMR*CVLPQQ Trigger: TTGCTGTGGGAGGACACATCATCTCATGAAAGAACT...CCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCATGTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
||
| CDS-3UTR TCA 90 bp | GCTACAGGTAGTCTGTTTCTCAATTGTAATAAAACACTGACTTTTCTACTCAGGGGTTATACAGAGATGTaGAACTCACAGACCAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ATGSLFLNCNKTLTFLLRGYTEM*NSQTSR Trigger: GCGACTGGTCTGTGAGTTTCACATCTCTGTATAACC...CCTGAGTAGAAAAGTCAGTGTTTTATTACAATTGAGAAACAGACTACCTGTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
||
| CDS-3UTR GCA 90 bp | GCTACAGGTAGTCTGTTTCTCAATTGTAATAAAACACTGACTTTTCTACTCAGGCCACGGACTTGTCTTTaGAGCCATTTTCCTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATGSLFLNCNKTLTFLLRPRTCL*SHFPIS Trigger: GCTGATAGGAAAATGGCTGCAAAGACAAGTCCGTGG...CCTGAGTAGAAAAGTCAGTGTTTTATTACAATTGAGAAACAGACTACCTGTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000145833.8 |
||
| CDS-3UTR TCA 90 bp | GCTACAGGTAGTCTGTTTCTCAATTGTAATAAAACACTGACTTTTCTACTCAGGAGTTCTTTCATGAGATaGTGTGTCCTCCCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ATGSLFLNCNKTLTFLLRSSFMR*CVLPQQ Trigger: TTGCTGTGGGAGGACACATCATCTCATGAAAGAACT...CCTGAGTAGAAAAGTCAGTGTTTTATTACAATTGAGAAACAGACTACCTGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000144461.2 ENSMUST00000145833.8 |
||
| CDS-3UTR TCA 90 bp | ACCCTTCAATTACCTTCAATTCACAATTCCTGCAAAGTTGATGGGAATCTTTTAGGTTATACAGAGATGTaGAACTCACAGACCAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TLQLPSIHNSCKVDGNLLGYTEM*NSQTSR Trigger: GCGACTGGTCTGTGAGTTTCACATCTCTGTATAACC...TAAAAGATTCCCATCAACTTTGCAGGAATTGTGAATTGAAGGTAATTGAAGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
||
| CDS-3UTR GCA 90 bp | GCTACAGGTAGTCTGTTTCTCAATTGTAATAAAACACTGACTTTTCTACTCAGGTGCTTTCAGATGATCTaGCCAGGAAAAGGGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATGSLFLNCNKTLTFLLRCFQMI*PGKGLR Trigger: TCTCAACCCTTTTCCTGGGCAGATCATCTGAAAGCA...CCTGAGTAGAAAAGTCAGTGTTTTATTACAATTGAGAAACAGACTACCTGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000145833.8 |
||
| CDS-3UTR CCA 90 bp | GCTACAGGTAGTCTGTTTCTCAATTGTAATAAAACACTGACTTTTCTACTCAGGCTCAGATTCCAGGCTTaGGTCTCGAACTTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ATGSLFLNCNKTLTFLLRLRFQA*VSNFLL Trigger: AAGAAGAAAGTTCGAGACCCAAGCCTGGAATCTGAG...CCTGAGTAGAAAAGTCAGTGTTTTATTACAATTGAGAAACAGACTACCTGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
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| CDS-3UTR CCA 90 bp | ACCCTTCAATTACCTTCAATTCACAATTCCTGCAAAGTTGATGGGAATCTTTTACTCAGATTCCAGGCTTaGGTCTCGAACTTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLQLPSIHNSCKVDGNLLLRFQA*VSNFLL Trigger: AAGAAGAAAGTTCGAGACCCAAGCCTGGAATCTGAG...TAAAAGATTCCCATCAACTTTGCAGGAATTGTGAATTGAAGGTAATTGAAGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
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| CDS-3UTR CCA 90 bp | TGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGGATAGAGATCACGTCTaGCTTCTTAATTTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CKHRLPVSILSSKLTWLRDRDHV*LLNLIL Trigger: CAAGATCAAATTAAGAAGCCAGACGTGATCTCTATC...CCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
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| CDS-3UTR CCA 90 bp | GCTACAGGTAGTCTGTTTCTCAATTGTAATAAAACACTGACTTTTCTACTCAGGGATAGAGATCACGTCTaGCTTCTTAATTTGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATGSLFLNCNKTLTFLLRDRDHV*LLNLIL Trigger: CAAGATCAAATTAAGAAGCCAGACGTGATCTCTATC...CCTGAGTAGAAAAGTCAGTGTTTTATTACAATTGAGAAACAGACTACCTGTAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
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| CDS CCA 90 bp | CGGCGGGGCGCGGGCTCCGGCAGTGAGGCGGGCACGGCGGCACCATaGTCCCGAGACCTTTTCCGGCGGAGCCGCACGGTCTCAGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RRGAGSGSEAGTAAP*SRDLFRRSRTVSGG Trigger: GCCGCCTGAGACCGTGCGGCTCCGCCGGAAAAGGTCTCGGGACCATGGTGCCGCCGTGCCCGCCTCACTGCCGGAGCCCGCGCCCCGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000138560.2 ENSMUST00000139324.8 ENSMUST00000144461.2 |
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| CDS GCA 90 bp | CGTCCGAGACTCGCGGCCGGTTGTCCAGGCGAGCGAAAGGGTTCCTaGGGGCGATGGTCGCGGCGGCGCCTCCTCTGCCGCCGGCGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RPRLAAGCPGERKGS*GRWSRRRLLCRRRS Trigger: CGACCGCCGGCGGCAGAGGAGGCGCCGCCGCGACCATCGCCCGCAGGAACCCTTTCGCTCGCCTGGACAACCGGCCGCGAGTCTCGGACG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000138560.2 ENSMUST00000139324.8 ENSMUST00000144461.2 |
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| CDS CCA 90 bp | GAAGCGGGCCCGACGCCCCCTGAGGACCGCGGAGCGGCTCTTCGCTaGCCTCGTCCGAGACTCGCGGCCGGTTGTCCAGGCGAGCGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EAGPTPPEDRGAALR*PRPRLAAGCPGERK Trigger: CTTTCGCTCGCCTGGACAACCGGCCGCGAGTCTCGGACGAGGCCAGCGAAGAGCCGCTCCGCGGTCCTCAGGGGGCGTCGGGCCCGCTTC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 ENSMUST00000144461.2 |
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| CDS CCA 90 bp | GACTCGGGCCCGACGCCCCCTGAGGACCGCGGAGCGGCTCTTCGCTaGCCTCGTCCGAGACTCGCGGCCGGTTGTCCAGGCGAGCGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: DSGPTPPEDRGAALR*PRPRLAAGCPGERK Trigger: CTTTCGCTCGCCTGGACAACCGGCCGCGAGTCTCGGACGAGGCCAGCGAAGAGCCGCTCCGCGGTCCTCAGGGGGCGTCGGGCCCGAGTC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138560.2 |
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| CDS-3UTR CAA 90 bp | TCTTCGTCACTGACTGCCTGCTCCTCCTCAGATTCCAGGCTTGGGTCTCGAACTAGACAACGATACACGTaGACTCTGGGACAGTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SSSLTACSSSDSRLGSRTRQRYT*TLGQFR Trigger: ACGGAACTGTCCCAGAGTCAACGTGTATCGTTGTCT...AGTTCGAGACCCAAGCCTGGAATCTGAGGAGGAGCAGGCAGTCAGTGACGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 |
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| CDS-3UTR CAA 90 bp | TTGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTCACCTCGGAAGGCTATaGGGGATAAGAGAGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTWLRAQHLDEVQSSLPSHLGRL*GIREWV Trigger: CACCCACTCTCTTATCCCCAATAGCCTTCCGAGGTG...AGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
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| CDS-3UTR CAA 90 bp | TGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTGACTTGAGACAACGATACACGTaGACTCTGGGACAGTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: WLRAQHLDEVQSSLPSDLRQRYT*TLGQFR Trigger: ACGGAACTGTCCCAGAGTCAACGTGTATCGTTGTCT...CAAGTCAGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
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| CDS-3UTR CAA 90 bp | TGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTGACTTGAGAGACAGGCCAACATaGAAAACTGCAGTTGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: WLRAQHLDEVQSSLPSDLRDRPT*KTAVGS Trigger: CGAGCCAACTGCAGTTTTCAATGTTGGCCTGTCTCT...CAAGTCAGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023682.12 ENSMUST00000117159.8 |
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| CDS-3UTR CAA 90 bp | TTGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTAGAGACAGGCCAACATaGAAAACTGCAGTTGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LTWLRAQHLDEVQSSLPSRDRPT*KTAVGS Trigger: CGAGCCAACTGCAGTTTTCAATGTTGGCCTGTCTCT...AGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023682.12 ENSMUST00000117159.8 |
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| CDS-3UTR CAA 90 bp | TTGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTACCACGGACTTGTCTTaGCAGCCATTTTCCTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LTWLRAQHLDEVQSSLPSTTDLS*QPFSYQ Trigger: CTGATAGGAAAATGGCTGCAAAGACAAGTCCGTGGT...AGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
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| CDS-3UTR CAA 90 bp | AAGTTGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCACCACGGACTTGTCTTaGCAGCCATTTTCCTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: KLTWLRAQHLDEVQSSLPTTDLS*QPFSYQ Trigger: CTGATAGGAAAATGGCTGCAAAGACAAGTCCGTGGT...GGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
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| CDS GCA 90 bp | TTCTGTTGCCCTACAATGCTGGACAAGTCCTTGGGCTTCTTCCTGTaGTTTCAGATGATCTGCCCAGGAAAAGGGTTGAGAAGAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: FCCPTMLDKSLGFFL*FQMICPGKGLRRGE Trigger: TTCACCTCTTCTCAACCCTTTTCCTGGGCAGATCATCTGAAAGCACAGGAAGAAGCCCAAGGACTTGTCCAGCATTGTAGGGCAACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000138560.2 ENSMUST00000139324.8 ENSMUST00000145833.8 |
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| CDS-3UTR CAA 90 bp | TGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTGACTTGCTTCTTAATTTGATCTaGCACGCCTATCTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WLRAQHLDEVQSSLPSDLLLNLI*HAYLFQ Trigger: CTGGAAGAGATAGGCGTGCAAGATCAAATTAAGAAG...CAAGTCAGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
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| CDS-3UTR CAA 90 bp | TTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGGCCCAGCACTTACACCTCGGAAGGCTATaGGGGATAAGAGAGTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: LPVSILSSKLTWLRAQHLHLGRL*GIREWV Trigger: CACCCACTCTCTTATCCCCAATAGCCTTCCGAGGTG...TAAGTGCTGGGCCCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
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| CDS GCA 90 bp | TACAGAGATGTGAAACTCACAGACCAGTCGCTCATTAAAGCATGCTaGAGGGTTTCATCAGCTGACCACGGACTTGTCTTTGCAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: YRDVKLTDQSLIKAC*RVSSADHGLVFAAI Trigger: AATGGCTGCAAAGACAAGTCCGTGGTCAGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGACTGGTCTGTGAGTTTCACATCTCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000133942.8 ENSMUST00000138560.2 |
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| CDS GCA 90 bp | TTATACAGAGATGTGAAACTCACAGACCAGTCGCTCATTAAAGCATaGTGCAGGGTTTCATCAGCTGACCACGGACTTGTCTTTGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LYRDVKLTDQSLIKA*CRVSSADHGLVFAA Trigger: GGCTGCAAAGACAAGTCCGTGGTCAGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGACTGGTCTGTGAGTTTCACATCTCTGTATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000133942.8 ENSMUST00000138560.2 |
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| CDS-3UTR CAA 90 bp | TTGACATGGCTGAGGGCCCAGCACTTAGATGAAGTACAAAGTAGCCTCCCCTCTCTTCTTAATTTGATCTaGCACGCCTATCTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LTWLRAQHLDEVQSSLPSLLNLI*HAYLFQ Trigger: CTGGAAGAGATAGGCGTGCAAGATCAAATTAAGAAG...AGAGGGGAGGCTACTTTGTACTTCATCTAAGTGCTGGGCCCTCAGCCATGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
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| CDS-3UTR CAA 90 bp | ATATTCTTCCGAATGAACTTTAAAAGCCAGGGGCCTACGCATCTTGCATTTCCTCACCTCGGAAGGCTATaGGGGATAAGAGAGTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: IFFRMNFKSQGPTHLAFPHLGRL*GIREWV Trigger: CACCCACTCTCTTATCCCCAATAGCCTTCCGAGGTG...AGGAAATGCAAGATGCGTAGGCCCCTGGCTTTTAAAGTTCATTCGGAAGAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
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| CDS CCA 90 bp | GTCCAGTTCTTTATCCAGAGACAGGCCAACATTGAAAACTGCAGTTaGCTCGTGTGCATACAGTCCTTAAGCATTTGCATTGAGGCACCT | + |
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Preference number: 5 (lower is better) Translates to: VQFFIQRQANIENCS*LVCIQSLSICIEAP Trigger: AGGTGCCTCAATGCAAATGCTTAAGGACTGTATGCACACGAGCCAACTGCAGTTTTCAATGTTGGCCTGTCTCTGGATAAAGAACTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117159.8 |
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| CDS-3UTR CAA 90 bp | AGGATCTCCAACTTAAAATGTAGTCACTCATTTCCACACTCCGCAGGGATGACTAGACAACGATACACGTaGACTCTGGGACAGTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: RISNLKCSHSFPHSAGMTRQRYT*TLGQFR Trigger: ACGGAACTGTCCCAGAGTCAACGTGTATCGTTGTCT...AGTCATCCCTGCGGAGTGTGGAAATGAGTGACTACATTTTAAGTTGGAGATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000145833.8 |
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| CDS-3UTR CAA 90 bp | TCCAACTTAAAATGTAGTCACTCATTTCCACACTCCGCAGGGATGACTTCCCCAACCACGGACTTGTCTTaGCAGCCATTTTCCTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: SNLKCSHSFPHSAGMTSPTTDLS*QPFSYQ Trigger: CTGATAGGAAAATGGCTGCAAAGACAAGTCCGTGGT...TGGGGAAGTCATCCCTGCGGAGTGTGGAAATGAGTGACTACATTTTAAGTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000136699.8 ENSMUST00000145833.8 |
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| CDS-3UTR CAA 90 bp | AACTTCTCTGCTGCAATGAAAGACTTATCAGGTGAGCACTGCCCTGTGACCTGCCTTCTTAATTTGATCTaGCACGCCTATCTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NFSAAMKDLSGEHCPVTCLLNLI*HAYLFQ Trigger: CTGGAAGAGATAGGCGTGCAAGATCAAATTAAGAAG...GCAGGTCACAGGGCAGTGCTCACCTGATAAGTCTTTCATTGCAGCAGAGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
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| CDS-3UTR CAA 90 bp | GGAAGATGTTATCTGAGAACTTGGGAATTTGTTAAGACAGCAGGCACTGACTTGAGAGACAGGCCAACATaGAAAACTGCAGTTGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GRCYLRTWEFVKTAGTDLRDRPT*KTAVGS Trigger: CGAGCCAACTGCAGTTTTCAATGTTGGCCTGTCTCT...CAAGTCAGTGCCTGCTGTCTTAACAAATTCCCAAGTTCTCAGATAACATCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231459.2 |
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| CDS-3UTR CAA 90 bp | TCTGACTTGACACAGAAGATGAACATACGTGAGAGCAGAGGAACTAGAAATCATAGACAACGATACACGTaGACTCTGGGACAGTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SDLTQKMNIRESRGTRNHRQRYT*TLGQFR Trigger: ACGGAACTGTCCCAGAGTCAACGTGTATCGTTGTCT...ATGATTTCTAGTTCCTCTGCTCTCACGTATGTTCATCTTCTGTGTCAAGTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 |
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| CDS-3UTR CAA 90 bp | ATATTCTTCCGAATGAACTTTAAAAGCCAGGGGCCTACGCATCTTGCATTTCCTACCACGGACTTGTCTTaGCAGCCATTTTCCTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: IFFRMNFKSQGPTHLAFPTTDLS*QPFSYQ Trigger: CTGATAGGAAAATGGCTGCAAAGACAAGTCCGTGGT...AGGAAATGCAAGATGCGTAGGCCCCTGGCTTTTAAAGTTCATTCGGAAGAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000145833.8 |
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| CDS-3UTR CAA 90 bp | TGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGACCACGGACTTGTCTTaGCAGCCATTTTCCTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: CKHRLPVSILSSKLTWLRTTDLS*QPFSYQ Trigger: CTGATAGGAAAATGGCTGCAAAGACAAGTCCGTGGT...CCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
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| CDS-3UTR CAA 90 bp | ACCCTTCAATTACCTTCAATTCACAATTCCTGCAAAGTTGATGGGAATCTTTTACACCTCGGAAGGCTATaGGGGATAAGAGAGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLQLPSIHNSCKVDGNLLHLGRL*GIREWV Trigger: CACCCACTCTCTTATCCCCAATAGCCTTCCGAGGTG...TAAAAGATTCCCATCAACTTTGCAGGAATTGTGAATTGAAGGTAATTGAAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
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| CDS-3UTR CAA 90 bp | GCTACAGGTAGTCTGTTTCTCAATTGTAATAAAACACTGACTTTTCTACTCAGGAGACAACGATACACGTaGACTCTGGGACAGTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: ATGSLFLNCNKTLTFLLRRQRYT*TLGQFR Trigger: ACGGAACTGTCCCAGAGTCAACGTGTATCGTTGTCT...CCTGAGTAGAAAAGTCAGTGTTTTATTACAATTGAGAAACAGACTACCTGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000145833.8 |
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| CDS-3UTR CAA 90 bp | TGCAAACACAGATTACCTGTAAGCATACTAAGTAGTAAGTTGACATGGCTGAGGCTTCTTAATTTGATCTaGCACGCCTATCTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CKHRLPVSILSSKLTWLRLLNLI*HAYLFQ Trigger: CTGGAAGAGATAGGCGTGCAAGATCAAATTAAGAAG...CCTCAGCCATGTCAACTTACTACTTAGTATGCTTACAGGTAATCTGTGTTTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 |
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| CDS-3UTR CAA 90 bp | ACCCTTCAATTACCTTCAATTCACAATTCCTGCAAAGTTGATGGGAATCTTTTAAGAGACAGGCCAACATaGAAAACTGCAGTTGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TLQLPSIHNSCKVDGNLLRDRPT*KTAVGS Trigger: CGAGCCAACTGCAGTTTTCAATGTTGGCCTGTCTCT...TAAAAGATTCCCATCAACTTTGCAGGAATTGTGAATTGAAGGTAATTGAAGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
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| CDS-3UTR CAA 90 bp | ACCCTTCAATTACCTTCAATTCACAATTCCTGCAAAGTTGATGGGAATCTTTTAACCACGGACTTGTCTTaGCAGCCATTTTCCTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLQLPSIHNSCKVDGNLLTTDLS*QPFSYQ Trigger: CTGATAGGAAAATGGCTGCAAAGACAAGTCCGTGGT...TAAAAGATTCCCATCAACTTTGCAGGAATTGTGAATTGAAGGTAATTGAAGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133942.8 |
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| CDS GCA 72 bp | CTCGCGGCCGGTTGTCCAGGCGAGCGAAAGGGTTCCTaGGGGCGATGGTCGCGGCGGCGCCTCCTCTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LAAGCPGERKGS*GRWSRRRLLCR Trigger: GCGGCAGAGGAGGCGCCGCCGCGACCATCGCCCGCAGGAACCCTTTCGCTCGCCTGGACAACCGGCCGCGAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000138560.2 ENSMUST00000139324.8 ENSMUST00000144461.2 |
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| CDS CCA 72 bp | GCGGGCTCCGGCAGTGAGGCGGGCACGGCGGCACCATaGTCCCGAGACCTTTTCCGGCGGAGCCGCACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: AGSGSEAGTAAP*SRDLFRRSRTV Trigger: GACCGTGCGGCTCCGCCGGAAAAGGTCTCGGGACCATGGTGCCGCCGTGCCCGCCTCACTGCCGGAGCCCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000138560.2 ENSMUST00000139324.8 ENSMUST00000144461.2 |
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| CDS CCA 72 bp | GGTTGTCCAGGCGAGCGAAAGGGTTCCTGCGGGCGATaGTCGCGGCGGCGCCTCCTCTGCCGCCGGCGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: GCPGERKGSCGR*SRRRLLCRRRS Trigger: CGACCGCCGGCGGCAGAGGAGGCGCCGCCGCGACCATCGCCCGCAGGAACCCTTTCGCTCGCCTGGACAACC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000138560.2 ENSMUST00000139324.8 ENSMUST00000144461.2 |
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| CDS CAA 72 bp | GGCTCTTCGCTGGCCTCGTCCGAGACTCGCGGCCGGTaGTCCAGGCGAGCGAAAGGGTTCCTGCGGGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: GSSLASSETRGR*SRRAKGFLRAM Trigger: CATCGCCCGCAGGAACCCTTTCGCTCGCCTGGACAACCGGCCGCGAGTCTCGGACGAGGCCAGCGAAGAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000138560.2 ENSMUST00000139324.8 ENSMUST00000144461.2 |
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| CDS TCA 72 bp | TCTTCATTAGAATCTAGAAGCGGGCCCGACGCCCCCTaGGGACCGCGGAGCGGCTCTTCGCTGGCCTCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLESRSGPDAP*GPRSGSSLASS Trigger: GGACGAGGCCAGCGAAGAGCCGCTCCGCGGTCCTCAGGGGGCGTCGGGCCCGCTTCTAGATTCTAATGAAGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000139324.8 ENSMUST00000144461.2 |
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| CDS GCA 72 bp | CAGACAACGATACACGTTGACTCTGGGACAGTTCCGTaGCAGTTCTTTCATGAGATGATGTGTCCTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: QTTIHVDSGTVP*QFFHEMMCPPT Trigger: TGTGGGAGGACACATCATCTCATGAAAGAACTGGCACGGAACTGTCCCAGAGTCAACGTGTATCGTTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000145833.8 |
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| CDS GCA 72 bp | CCTACAATGCTGGACAAGTCCTTGGGCTTCTTCCTGTaGTTTCAGATGATCTGCCCAGGAAAAGGGTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PTMLDKSLGFFL*FQMICPGKGLR Trigger: TCTCAACCCTTTTCCTGGGCAGATCATCTGAAAGCACAGGAAGAAGCCCAAGGACTTGTCCAGCATTGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000138560.2 ENSMUST00000139324.8 ENSMUST00000145833.8 |
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| CDS GCA 72 bp | GATGTGAAACTCACAGACCAGTCGCTCATTAAAGCATaGTGCAGGGTTTCATCAGCTGACCACGGACTTGTC | + |
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Preference number: 6 (lower is better) Translates to: DVKLTDQSLIKA*CRVSSADHGLV Trigger: GACAAGTCCGTGGTCAGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGACTGGTCTGTGAGTTTCACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000133942.8 ENSMUST00000138560.2 |
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| CDS GCA 72 bp | ATTACTGCTCCGTGCCAGTCGCTCATTAAAGCATGCTaGAGGGTTTCATCAGCTGACCACGGACTTGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: ITAPCQSLIKAC*RVSSADHGLVF Trigger: AAAGACAAGTCCGTGGTCAGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGACTGGCACGGAGCAGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145833.8 |
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| CDS GCA 72 bp | ATACTCTGGGGTAAAGTCACTTCTGTTGCCCTACAATaGTGGACAAGTCCTTGGGCTTCTTCCTGTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ILWGKVTSVALQ*WTSPWASSCAF Trigger: GAAAGCACAGGAAGAAGCCCAAGGACTTGTCCAGCATTGTAGGGCAACAGAAGTGACTTTACCCCAGAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000138560.2 ENSMUST00000139324.8 ENSMUST00000145833.8 |
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| CDS GCA 72 bp | GTGAAACTCACAGACCAGTCGCTCATTAAAGCATGCTaGAGGGTTTCATCAGCTGACCACGGACTTGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VKLTDQSLIKAC*RVSSADHGLVF Trigger: AAAGACAAGTCCGTGGTCAGCTGATGAAACCCTGCAGCATGCTTTAATGAGCGACTGGTCTGTGAGTTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000133942.8 ENSMUST00000138560.2 |
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| CDS CAA 90 bp | TGTGAAACTCACAGACCTGTATACTCTGGGGTAAAGTCACTTCTGTaGCCCTACAATGCTGGACAAGTCCTTGGGCTTCTTCCTGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: CETHRPVYSGVKSLL*PYNAGQVLGLLPVL Trigger: AAGCACAGGAAGAAGCCCAAGGACTTGTCCAGCATTGTAGGGCAACAGAAGTGACTTTACCCCAGAGTATACAGGTCTGTGAGTTTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139324.8 |
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| CDS TCA 72 bp | ACTCTGGGACAGTTCCGTGCCAGTTCTTTCATGAGATaGTGTGTCCTCCCACAGCAAGTTATTTTCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: TLGQFRASSFMR*CVLPQQVIFFI Trigger: AATGAAGAAAATAACTTGCTGTGGGAGGACACATCATCTCATGAAAGAACTGGCACGGAACTGTCCCAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000023682.12 ENSMUST00000114031.8 ENSMUST00000117159.8 ENSMUST00000136699.8 ENSMUST00000139324.8 ENSMUST00000145833.8 |
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| CDS CCA 72 bp | TTTATCCAGAGACAGGCCAACATTGAAAACTGCAGTTaGCTCGTGTGCATACAGTCCTTAAGCATTTGCATT | + |
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Preference number: 6 (lower is better) Translates to: FIQRQANIENCS*LVCIQSLSICI Trigger: AATGCAAATGCTTAAGGACTGTATGCACACGAGCCAACTGCAGTTTTCAATGTTGGCCTGTCTCTGGATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117159.8 |
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