Pregenerated sensors for DOLPP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026856Ensembl transcript IDs: ENSMUST00000028209.15, ENSMUST00000113612.10, ENSMUST00000123202.8, ENSMUST00000137248.8, ENSMUST00000155196.2
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGACAGCAGGGGAGGCCTCGCTCCTGGGCCCTGGGCCCTAGGCCCTaGTCAGGCCCAGCAGGAGGCAGGCTGTACTGCCTGAGGCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: GQQGRPRSWALGPRP*SGPAGGRLYCLRLR Trigger: TCTGAGCCTCAGGCAGTACAGCCTGCCTCCTGCTGGGCCTGAGCAGGGCCTAGGGCCCAGGGCCCAGGAGCGAGGCCTCCCCTGCTGTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR TCA 90 bp | GCCCTAGGCCCTGCTCAGGCCCAGCAGGAGGCAGGCTGTACTGCCTaGGGCTCAGAGCACAGGGTCTGGGAGCTAACCTGGGCCCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: ALGPAQAQQEAGCTA*GSEHRVWELTWALC Trigger: ACACAGGGCCCAGGTTAGCTCCCAGACCCTGTGCTCTGAGCCTCAGGCAGTACAGCCTGCCTCCTGCTGGGCCTGAGCAGGGCCTAGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR GCA 90 bp | CAGCTGGGATCAGAGCCCACTCCCAGGCAGACCCCAGGATCAACCTaGACTGGTTTCCAGCCTCCAGGACAGGCCAGGAAGGACAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: QLGSEPTPRQTPGST*TGFQPPGQARKDRD Trigger: GTCCCTGTCCTTCCTGGCCTGTCCTGGAGGCTGGAAACCAGTGCAGGTTGATCCTGGGGTCTGCCTGGGAGTGGGCTCTGATCCCAGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR GCA 90 bp | GCAGGCCAGATTCGGAGGCTAGACGCAGCCACACCCACCAGTCACTaGAGTTTTGTTCCAAGTTTGCGCTGTCTGTTCCTGGCTTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: AGQIRRLDAATPTSH*SFVPSLRCLFLASA Trigger: GGCAGAAGCCAGGAACAGACAGCGCAAACTTGGAACAAAACTGCAGTGACTGGTGGGTGTGGCTGCGTCTAGCCTCCGAATCTGGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137248.8 ENSMUST00000155196.2 |
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| 3UTR CCA 90 bp | CTGCTTCAGTTCTGGAAGCATCTCCACAGCTGTGGCAGGACAACCTaGAGAGAGTCCCTTAAAAGGGACTCCTGGCAGCTGGGATCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LLQFWKHLHSCGRTT*RESLKRDSWQLGSE Trigger: CTCTGATCCCAGCTGCCAGGAGTCCCTTTTAAGGGACTCTCTCCAGGTTGTCCTGCCACAGCTGTGGAGATGCTTCCAGAACTGAAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR CCA 90 bp | GACAGACTGCTACCCGATGGCCAGACAAAAGGAGCTGTAAACGCTTaGGTGTGCTCACCCGTATGTGCAGGCTCTTTTGTCAGGAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: DRLLPDGQTKGAVNA*VCSPVCAGSFVRKG Trigger: TCCCTTCCTGACAAAAGAGCCTGCACATACGGGTGAGCACACCCAAGCGTTTACAGCTCCTTTTGTCTGGCCATCGGGTAGCAGTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR GCA 90 bp | TGGACACGGCCTTTAACAAACACAAAGGAAAGCACCAAAAACTTGTaGTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: WTRPLTNTKESTKNL*FSSRLGTSREKRGR Trigger: CCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTTTTTGGTGCTTTCCTTTGTGTTTGTTAAAGGCCGTGTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGGGCTCAACAGCTCCCCCACATGGGCAGGCGATaGGGGAGGGTGTCTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: SSRLGTSREKRGRAQQLPHMGRR*GRVSAL Trigger: CAGTGCAGACACCCTCCCCCATCGCCTGCCCATGTG...GGGGAGCTGTTGAGCCCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGATGGGCTCTGGCCATGTGACCCACACACAGCAGGCCCTCCCAGGGTCCTCCTGCAAGGCATGGTaGAGGCCAGATTCGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: AEMGSGHVTHTQQALPGSSCKAW*RPDSEA Trigger: AGCCTCCGAATCTGGCCTGCACCATGCCTTGCAGGA...GGACCCTGGGAGGGCCTGCTGTGTGTGGGTCACATGGCCAGAGCCCATCTCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
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| 3UTR-3UTR CCA 90 bp | ACACGCACGCTGAGGCCCGTGCCAAGAGCACTTTCCACCCAGCCAGGAGCTGGCCCATCCTGCAAGGCATaGTGCAGGCCAGATTCGGAG | + |
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Preference number: 2 (lower is better) Translates to: TRTLRPVPRALSTQPGAGPSCKA*CRPDSE Trigger: CTCCGAATCTGGCCTGCACCATGCCTTGCAGGATGG...GCCAGCTCCTGGCTGGGTGGAAAGTGCTCTTGGCACGGGCCTCAGCGTGCGTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGGCTGCTTCAGTTCTGGAAGCATCTCCACAGCTGTGGCAGGACAACCTGTGGGCTCTGGCCATGTaGCCCACACACAGCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: PGAASVLEASPQLWQDNLWALAM*PTHSRP Trigger: GGGCCTGCTGTGTGTGGGTCACATGGCCAGAGCCCA...CAGGTTGTCCTGCCACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGGGCTCAACAGCTCCGGATAAACAGGTGCTaGCTCTGGGCCCTGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: FSSRLGTSREKRGRAQQLRINRC*LWALPQ Trigger: CTGGGGCAGGGCCCAGAGTCAGCACCTGTTTATCCG...GAGCTGTTGAGCCCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCAAGGCATGGTGCAGGCCAGATTCGGAGGCTAGACGCAGCCACACCCACCTCCTGCAAGGCATGGTaGAGGCCAGATTCGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PARHGAGQIRRLDAATPTSCKAW*RPDSEA Trigger: AGCCTCCGAATCTGGCCTGCACCATGCCTTGCAGGA...GGTGGGTGTGGCTGCGTCTAGCCTCCGAATCTGGCCTGCACCATGCCTTGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCCCAGGGGCTGCTTCAGTTCTGGAAGCATCTCCACAGCTGTGGCAGGACACACATGGGCAGGCGATaGGGGAGGGTGTCTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: LPQGLLQFWKHLHSCGRTHMGRR*GRVSAL Trigger: CAGTGCAGACACCCTCCCCCATCGCCTGCCCATGTG...TGTCCTGCCACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCCCTGGGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTACACGCACGCTGAGGCCCGTGCCAAGAGCACTTTCCACCCAGCCAGGAGCAGCAGAGATGGGCTCTaGCCATGTGACCCACACACA | + |
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Preference number: 2 (lower is better) Translates to: LYTHAEARAKSTFHPARSSRDGL*PCDPHT Trigger: TGTGTGTGGGTCACATGGCCAGAGCCCATCTCTGCT...GCTCCTGGCTGGGTGGAAAGTGCTCTTGGCACGGGCCTCAGCGTGCGTGTAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAAAAACTTGTGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGTGGGCTCTGGCCATGTaGCCCACACACAGCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: TKNLCFSSRLGTSREKRGWALAM*PTHSRP Trigger: GGGCCTGCTGTGTGTGGGTCACATGGCCAGAGCCCA...CCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTTTTTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTGTGTACACAGGGCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACGGAGGCAGGCTGTACTaGCTGAGGCTCAGAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: PCVHRAAAAEWPLQHELHGGRLY*LRLRAQ Trigger: CTGTGCTCTGAGCCTCAGGCAGTACAGCCTGCCTCC...GTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTACACAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
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| 3UTR-3UTR GCA 90 bp | AACAGCTCCCCCAGGGGCTGCTTCAGTTCTGGAAGCATCTCCACAGCTGTGGCAATGGGGGAGGGTGTCTaGACTGCCACACAGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: NSSPRGCFSSGSISTAVAMGEGV*TATQPA Trigger: TGCTGGCTGTGTGGCAGTGCAGACACCCTCCCCCAT...TGCCACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCCCTGGGGGAGCTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR CCA 90 bp | AACTTGTGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGGGCTGTTCTGGAATGGCGATaGTGGCAGGGACAGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: NLCFSSRLGTSREKRGRAVLEWR*WQGQQG Trigger: CCCCTGCTGTCCCTGCCACCATCGCCATTCCAGAAC...AGCCCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR CCA 90 bp | AACTTGTGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGGGCTCAAATCCAGAGCACATaGGCAGGCGATGGGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: NLCFSSRLGTSREKRGRAQIQST*AGDGGG Trigger: CCCTCCCCCATCGCCTGCCCATGTGCTCTGGATTTG...AGCCCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAAGGCATGGTGCAGGCCAGATTCGGAGGCTAGACGCAGCCACACCCACCAGAAAGGCTCCACTTGGTaGCTCTGGTCTGTAGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: CKAWCRPDSEARRSHTHQKGSTW*LWSVEV Trigger: GACCTCTACAGACCAGAGTCACCAAGTGGAGCCTTT...CTGGTGGGTGTGGCTGCGTCTAGCCTCCGAATCTGGCCTGCACCATGCCTTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCAACAGCTCCCCCAGGGGCTGCTTCAGTTCTGGAAGCATCTCCACAGCTGTTCCTGCAAGGCATGGTaGAGGCCAGATTCGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: AQQLPQGLLQFWKHLHSCSCKAW*RPDSEA Trigger: AGCCTCCGAATCTGGCCTGCACCATGCCTTGCAGGA...ACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCCCTGGGGGAGCTGTTGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTGTGATGTCGGGTTGGTAGAGGGAAGAACACAAGCCAGCAGCCCAGCCGACACACAGGGCAGCTGCTaGAGAGTGGCCTCTTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PCDVGLVEGRTQASSPADTQGSC*RVASSA Trigger: TGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGT...GTCGGCTGGGCTGCTGGCTTGTGTTCTTCCCTCTACCAACCCGACATCACAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGGGCTCAACAGTGTACACAGGGCAGCTaGTGCAGAGTGGCCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: CFSSRLGTSREKRGRAQQCTQGS*CRVASS Trigger: TGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTACA...CTGTTGAGCCCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTGTGATGTCGGGTTGGTAGAGGGAAGAACACAAGCCAGCAGCCCAGCCGACCCATCCTGCAAGGCATaGTGCAGGCCAGATTCGGAG | + |
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Preference number: 2 (lower is better) Translates to: PCDVGLVEGRTQASSPADPSCKA*CRPDSE Trigger: CTCCGAATCTGGCCTGCACCATGCCTTGCAGGATGG...GTCGGCTGGGCTGCTGGCTTGTGTTCTTCCCTCTACCAACCCGACATCACAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCTGCTTCCTCTCTTTTGTTCAAGTGGGGATGAAGACAGACTGCTACCCTGGGCTCTGGCCATGTaGCCCACACACAGCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: QLLLPLFCSSGDEDRLLPWALAM*PTHSRP Trigger: GGGCCTGCTGTGTGTGGGTCACATGGCCAGAGCCCA...GGGTAGCAGTCTGTCTTCATCCCCACTTGAACAAAAGAGAGGAAGCAGGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTGTGTACACAGGGCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACTGTACACAGGGCAGCTaGTGCAGAGTGGCCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: PCVHRAAAAEWPLQHELHCTQGS*CRVASS Trigger: TGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTACA...GTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTACACAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACCGGAGAAAGCCCTTGTGATGTCGGGTTGGTAGAGGGAAGAACACAAGCCTCAGAGCACAGGGTCTaGGAGCTAACCTGGGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RTGESPCDVGLVEGRTQASEHRV*ELTWAL Trigger: CAGGGCCCAGGTTAGCTCCCAGACCCTGTGCTCTGA...GGCTTGTGTTCTTCCCTCTACCAACCCGACATCACAAGGGCTTTCTCCGGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR CCA 90 bp | AACTTGTGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGGGCTACAAGGGTTCTGGAATaGCGATGGTGGCAGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: NLCFSSRLGTSREKRGRATRVLE*RWWQGQ Trigger: CTGTCCCTGCCACCATCGCCATTCCAGAACCCTTGT...AGCCCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTGTGATGTCGGGTTGGTAGAGGGAAGAACACAAGCCAGCAGCCCAGCCGACACAAGGGTTCTGGAATaGCGATGGTGGCAGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: PCDVGLVEGRTQASSPADTRVLE*RWWQGQ Trigger: CTGTCCCTGCCACCATCGCCATTCCAGAACCCTTGT...GTCGGCTGGGCTGCTGGCTTGTGTTCTTCCCTCTACCAACCCGACATCACAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGGGCTCAACAGGGGCTGCTTCAGTTCTaGAAGCATCTCCACAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: CFSSRLGTSREKRGRAQQGLLQF*KHLHSC Trigger: ACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCC...CTGTTGAGCCCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGGGCTCAACAGTTGTTCAAGTGGGGATaGAGACAGACTGCTACCCGA | + |
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Preference number: 2 (lower is better) Translates to: CFSSRLGTSREKRGRAQQLFKWG*RQTATR Trigger: TCGGGTAGCAGTCTGTCTTCATCCCCACTTGAACAA...CTGTTGAGCCCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGTACACAGGGCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACAATGGAGGCAGGCTGTACTaGCTGAGGCTCAGAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: CVHRAAAAEWPLQHELHNGGRLY*LRLRAQ Trigger: CTGTGCTCTGAGCCTCAGGCAGTACAGCCTGCCTCC...ATTGTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACCGGAGAAAGCCCTTGTGATGTCGGGTTGGTAGAGGGAAGAACACAAGCCCCATCCTGCAAGGCATaGTGCAGGCCAGATTCGGAG | + |
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Preference number: 2 (lower is better) Translates to: RTGESPCDVGLVEGRTQAPSCKA*CRPDSE Trigger: CTCCGAATCTGGCCTGCACCATGCCTTGCAGGATGG...GGCTTGTGTTCTTCCCTCTACCAACCCGACATCACAAGGGCTTTCTCCGGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACAATCCCAAAAGATCAGAGCACAGGGTCTaGGAGCTAACCTGGGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RAAAAEWPLQHELHNPKRSEHRV*ELTWAL Trigger: CAGGGCCCAGGTTAGCTCCCAGACCCTGTGCTCTGA...TCTTTTGGGATTGTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTACACAGGGCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACAATTCAGAGCACAGGGTCTaGGAGCTAACCTGGGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: CVHRAAAAEWPLQHELHNSEHRV*ELTWAL Trigger: CAGGGCCCAGGTTAGCTCCCAGACCCTGTGCTCTGA...ATTGTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
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| 3UTR-3UTR CCA 90 bp | AAACGCTTGGGTGTGCTCACCCGTATGTGCAGGCTCTTTTGTCAGGAAGGGATACTGGAATGGCGATGGTaGCAGGGACAGCAGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: KRLGVLTRMCRLFCQEGILEWRW*QGQQGR Trigger: CCTCCCCTGCTGTCCCTGCCACCATCGCCATTCCAG...TATCCCTTCCTGACAAAAGAGCCTGCACATACGGGTGAGCACACCCAAGCGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTGCCCCAGACGAGGAAACACTGACAAGGGTTCTGGAATGGCGATGGTGGTCCTGGCTTCTGCCCTaGTTACTGTGTACTCAAACC | + |
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Preference number: 2 (lower is better) Translates to: GPAPDEETLTRVLEWRWWSWLLP*LLCTQT Trigger: GGTTTGAGTACACAGTAACCAGGGCAGAAGCCAGGA...CCACCATCGCCATTCCAGAACCCTTGTCAGTGTTTCCTCGTCTGGGGCAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137248.8 |
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| 3UTR-3UTR GCA 90 bp | TGTAAACGCTTGGGTGTGCTCACCCGTATGTGCAGGCTCTTTTGTCAGGAAGGGTCCTGCAAGGCATGGTaGAGGCCAGATTCGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: CKRLGVLTRMCRLFCQEGSCKAW*RPDSEA Trigger: AGCCTCCGAATCTGGCCTGCACCATGCCTTGCAGGA...CCCTTCCTGACAAAAGAGCCTGCACATACGGGTGAGCACACCCAAGCGTTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
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| 3UTR-3UTR GCA 90 bp | TGTAAACGCTTGGGTGTGCTCACCCGTATGTGCAGGCTCTTTTGTCAGGAAGGGACACAGGGCAGCTGCTaGAGAGTGGCCTCTTCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: CKRLGVLTRMCRLFCQEGTQGSC*RVASSA Trigger: TGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGT...CCCTTCCTGACAAAAGAGCCTGCACATACGGGTGAGCACACCCAAGCGTTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCACCAAAAACTTGTGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGCTGACTCTGGGCCCTaGCCCAGACGAGGAAACACT | + |
|
Preference number: 2 (lower is better) Translates to: KHQKLVLQQQVRDLQGETADSGP*PRRGNT Trigger: AGTGTTTCCTCGTCTGGGGCAGGGCCCAGAGTCAGC...CGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTTTTTGGTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCCCCCAGGGGCTGCTTCAGTTCTGGAAGCATCTCCACAGCTGTGGCAGGACACAGCATCCCAGCTCCTaGTTCCTCTCTTTTGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: LPQGLLQFWKHLHSCGRTQHPSS*FLSFVQ Trigger: TTGAACAAAAGAGAGGAAGCAGGAGCTGGGATGCTG...TGTCCTGCCACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCCCTGGGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGGGCTCAACAGCTCAGCACCAAAAACTTGTaGTTCAGCAGCAGGTTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: FSSRLGTSREKRGRAQQLSTKNL*FSSRLG Trigger: CCCTAACCTGCTGCTGAAGCACAAGTTTTTGGTGCT...GAGCTGTTGAGCCCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR CAA 90 bp | AGACAGACTGCTACCCGATGGCCAGACAAAAGGAGCTGTAAACGCTaGGGTGTGCTCACCCGTATGTGCAGGCTCTTTTGTCAGGAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: RQTATRWPDKRSCKR*GVLTRMCRLFCQEG Trigger: CCCTTCCTGACAAAAGAGCCTGCACATACGGGTGAGCACACCCAAGCGTTTACAGCTCCTTTTGTCTGGCCATCGGGTAGCAGTCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCATGAACTCCACAATCCCAAAAGAATAAATAGTGCGCATTCCGCTACCTGCTGGGCTCTGGCCATGTaGCCCACACACAGCAGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: QHELHNPKRINSAHSATCWALAM*PTHSRP Trigger: GGGCCTGCTGTGTGTGGGTCACATGGCCAGAGCCCA...GCAGGTAGCGGAATGCGCACTATTTATTCTTTTGGGATTGTGGAGTTCATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGGTGACTCTGGTCTGTAGAGGTCTCTGCTTCACCCCTCCATCCATCATTCTGTCCTGCAAGGCATGGTaGAGGCCAGATTCGGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LVTLVCRGLCFTPPSIILSCKAW*RPDSEA Trigger: AGCCTCCGAATCTGGCCTGCACCATGCCTTGCAGGA...CAGAATGATGGATGGAGGGGTGAAGCAGAGACCTCTACAGACCAGAGTCACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGGCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACAATCCCAAAAGATGTACACAGGGCAGCTaGTGCAGAGTGGCCTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: RAAAAEWPLQHELHNPKRCTQGS*CRVASS Trigger: TGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTACA...TCTTTTGGGATTGTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAAAGGAAAGCACCAAAAACTTGTGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAGGCAGGCTGTACTaGCTGAGGCTCAGAGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: HKGKHQKLVLQQQVRDLQGGRLY*LRLRAQ Trigger: CTGTGCTCTGAGCCTCAGGCAGTACAGCCTGCCTCC...CTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTTTTTGGTGCTTTCCTTTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACAATCCCAAAAGAATAGGAGGCAGGCTGTACTaGCTGAGGCTCAGAGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: AAAAEWPLQHELHNPKRIGGRLY*LRLRAQ Trigger: CTGTGCTCTGAGCCTCAGGCAGTACAGCCTGCCTCC...TATTCTTTTGGGATTGTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTACACAGGGCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACAATCCTAGAGACAGCACGTaGCTCCACAGCAAGTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: CVHRAAAAEWPLQHELHNPRDST*LHSKSK Trigger: CTTGGACTTGCTGTGGAGGCACGTGCTGTCTCTAGG...ATTGTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137248.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCCCCCAGGGGCTGCTTCAGTTCTGGAAGCATCTCCACAGCTGTGGCAGGACAGTTTTGTTCCAAGTTTaGGCTGTCTGTTCCTGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: LPQGLLQFWKHLHSCGRTVLFQV*AVCSWL Trigger: AAGCCAGGAACAGACAGCGCAAACTTGGAACAAAAC...TGTCCTGCCACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCCCTGGGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000137248.8 |
||
| 3UTR-3UTR CCA 90 bp | CACAAAGGAAAGCACCAAAAACTTGTGCTTCAGCAGCAGGTTAGGGACCTCCAGGTTCTGGAATGGCGATaGTGGCAGGGACAGCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: HKGKHQKLVLQQQVRDLQVLEWR*WQGQQG Trigger: CCCCTGCTGTCCCTGCCACCATCGCCATTCCAGAAC...CTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTTTTTGGTGCTTTCCTTTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGGCTCCACTTGGTGACTCTGGTCTGTAGAGGTCTCTGCTTCACCCCTCCAAAAGGCTCCACTTGGTaGCTCTGGTCTGTAGAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: KRLHLVTLVCRGLCFTPPKGSTW*LWSVEV Trigger: GACCTCTACAGACCAGAGTCACCAAGTGGAGCCTTT...TGGAGGGGTGAAGCAGAGACCTCTACAGACCAGAGTCACCAAGTGGAGCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTACACAGGGCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACAATAAAGGCTCCACTTGGTaGCTCTGGTCTGTAGAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: CVHRAAAAEWPLQHELHNKGSTW*LWSVEV Trigger: GACCTCTACAGACCAGAGTCACCAAGTGGAGCCTTT...ATTGTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR-3UTR CCA 90 bp | CACAAAGGAAAGCACCAAAAACTTGTGCTTCAGCAGCAGGTTAGGGACCTCCAGCCATCCTGCAAGGCATaGTGCAGGCCAGATTCGGAG | + |
|
Preference number: 2 (lower is better) Translates to: HKGKHQKLVLQQQVRDLQPSCKA*CRPDSE Trigger: CTCCGAATCTGGCCTGCACCATGCCTTGCAGGATGG...CTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTTTTTGGTGCTTTCCTTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCCTGCTTCCTCTCTTTTGTTCAAGTGGGGATGAAGACAGACTGCTACCCGAGCAGAGATGGGCTCTaGCCATGTGACCCACACACA | + |
|
Preference number: 2 (lower is better) Translates to: SSCFLSFVQVGMKTDCYPSRDGL*PCDPHT Trigger: TGTGTGTGGGTCACATGGCCAGAGCCCATCTCTGCT...CGGGTAGCAGTCTGTCTTCATCCCCACTTGAACAAAAGAGAGGAAGCAGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR CAA 90 bp | GCTTGGACACGGCCTTTAACAAACACAAAGGAAAGCACCAAAAACTaGTGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: AWTRPLTNTKESTKN*CFSSRLGTSREKRG Trigger: CCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTTTTTGGTGCTTTCCTTTGTGTTTGTTAAAGGCCGTGTCCAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR CAA 90 bp | ACCTACCTCCCTAGAAACCAGCCCTGGCCCTGGCATCTGAGGGGCTaGGACACGGCCTTTAACAAACACAAAGGAAAGCACCAAAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: TYLPRNQPWPWHLRG*DTAFNKHKGKHQKL Trigger: AAGTTTTTGGTGCTTTCCTTTGTGTTTGTTAAAGGCCGTGTCCAAGCCCCTCAGATGCCAGGGCCAGGGCTGGTTTCTAGGGAGGTAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR CAA 90 bp | TTCCTGGCTTCTGCCCTGGTTACTGTGTACTCAAACCAGAGCACATaGGGAATGAGGCTCGTGTCCCGGATGAGGAAAAACTCGGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: FLASALVTVYSNQST*GMRLVSRMRKNSEM Trigger: CATCTCCGAGTTTTTCCTCATCCGGGACACGAGCCTCATTCCCAATGTGCTCTGGTTTGAGTACACAGTAACCAGGGCAGAAGCCAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACAATCCCAAAAGAATAAGCAGAGATGGGCTCTaGCCATGTGACCCACACACA | + |
|
Preference number: 2 (lower is better) Translates to: AAAAEWPLQHELHNPKRISRDGL*PCDPHT Trigger: TGTGTGTGGGTCACATGGCCAGAGCCCATCTCTGCT...TATTCTTTTGGGATTGTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCACCAAAAACTTGTGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGCTGCTTCAGTTCTaGAAGCATCTCCACAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: KHQKLVLQQQVRDLQGETGLLQF*KHLHSC Trigger: ACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCC...CGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTTTTTGGTGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR TCA 90 bp | GAACTCCACAATCCCAAAAGAATAAATAGTGCGCATTCCGCTACCTGCACTTCCAAAGGCTCCACTTGGTaGCTCTGGTCTGTAGAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: ELHNPKRINSAHSATCTSKGSTW*LWSVEV Trigger: GACCTCTACAGACCAGAGTCACCAAGTGGAGCCTTT...GGAAGTGCAGGTAGCGGAATGCGCACTATTTATTCTTTTGGGATTGTGGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCTCTTCAGCATGAACTCCACAATCCCAAAAGAATAAATAGTGCGCATTCCAGCAGAGATGGGCTCTaGCCATGTGACCCACACACA | + |
|
Preference number: 2 (lower is better) Translates to: WPLQHELHNPKRINSAHSSRDGL*PCDPHT Trigger: TGTGTGTGGGTCACATGGCCAGAGCCCATCTCTGCT...GGAATGCGCACTATTTATTCTTTTGGGATTGTGGAGTTCATGCTGAAGAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTCCTCTCTTTTGTTCAAGTGGGGATGAAGACAGACTGCTACCCGATGGCCGCAAGTCCAAGAACCTaGCGTTATTTGTTTGGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: CFLSFVQVGMKTDCYPMAASPRT*RYLFGA Trigger: TGCACCAAACAAATAACGCCAGGTTCTTGGACTTGC...GGCCATCGGGTAGCAGTCTGTCTTCATCCCCACTTGAACAAAAGAGAGGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137248.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTAACAAACACAAAGGAAAGCACCAAAAACTTGTGCTTCAGCAGCAGGTTAGGCCATCCTGCAAGGCATaGTGCAGGCCAGATTCGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FNKHKGKHQKLVLQQQVRPSCKA*CRPDSE Trigger: CTCCGAATCTGGCCTGCACCATGCCTTGCAGGATGG...CCTAACCTGCTGCTGAAGCACAAGTTTTTGGTGCTTTCCTTTGTGTTTGTTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR TCA 90 bp | ACGGCCTTTAACAAACACAAAGGAAAGCACCAAAAACTTGTGCTTCAGCAGCAGTTGTTCAAGTGGGGATaGAGACAGACTGCTACCCGA | + |
|
Preference number: 2 (lower is better) Translates to: TAFNKHKGKHQKLVLQQQLFKWG*RQTATR Trigger: TCGGGTAGCAGTCTGTCTTCATCCCCACTTGAACAA...CTGCTGCTGAAGCACAAGTTTTTGGTGCTTTCCTTTGTGTTTGTTAAAGGCCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR GCA 90 bp | TCATTTGATTTCTTAAACCACCTCACACTTGGCTTGTCTCAGGCAAAAAGTAAAGGAGGGTGTCTGCACTaGCACACAGCCAGCATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SFDFLNHLTLGLSQAKSKGGCLH*HTASIP Trigger: TGGGATGCTGGCTGTGTGGCAGTGCAGACACCCTCC...TTTACTTTTTGCCTGAGACAAGCCAAGTGTGAGGTGGTTTAAGAAATCAAATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCATTTGATTTCTTAAACCACCTCACACTTGGCTTGTCTCAGGCAAAAAGTCAAATCCAGAGCACATaGGCAGGCGATGGGGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: ISFDFLNHLTLGLSQAKSQIQST*AGDGGG Trigger: CCCTCCCCCATCGCCTGCCCATGTGCTCTGGATTTG...ACTTTTTGCCTGAGACAAGCCAAGTGTGAGGTGGTTTAAGAAATCAAATGAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCATTTGATTTCTTAAACCACCTCACACTTGGCTTGTCTCAGGCAAAAAGTCTTAAAAGGGACTCCTaGCAGCTGGGATCAGAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: ISFDFLNHLTLGLSQAKSLKRDS*QLGSEP Trigger: GGGCTCTGATCCCAGCTGCCAGGAGTCCCTTTTAAG...ACTTTTTGCCTGAGACAAGCCAAGTGTGAGGTGGTTTAAGAAATCAAATGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTTCATTTGATTTCTTAAACCACCTCACACTTGGCTTGTCTCAGGCAAAAAGTAAAGGCTCCACTTGGTaGCTCTGGTCTGTAGAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: ISFDFLNHLTLGLSQAKSKGSTW*LWSVEV Trigger: GACCTCTACAGACCAGAGTCACCAAGTGGAGCCTTT...ACTTTTTGCCTGAGACAAGCCAAGTGTGAGGTGGTTTAAGAAATCAAATGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTCATTTGATTTCTTAAACCACCTCACACTTGGCTTGTCTCAGGCAAAAAGTCAGCATCCCAGCTCCTaGTTCCTCTCTTTTGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: ISFDFLNHLTLGLSQAKSQHPSS*FLSFVQ Trigger: TTGAACAAAAGAGAGGAAGCAGGAGCTGGGATGCTG...ACTTTTTGCCTGAGACAAGCCAAGTGTGAGGTGGTTTAAGAAATCAAATGAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR CCA 72 bp | GCCCACTCCCAGGCAGACCCCAGGATCAACCTGCACTaGTTTCCAGCCTCCAGGACAGGCCAGGAAGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: AHSQADPRINLH*FPASRTGQEGQ Trigger: CTGTCCTTCCTGGCCTGTCCTGGAGGCTGGAAACCAGTGCAGGTTGATCCTGGGGTCTGCCTGGGAGTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR TCA 72 bp | CTCAGGACCAGAGGTACACACGCTCTACACGCACGCTaGGGCCCGTGCCAAGAGCACTTTCCACCCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRTRGTHALHAR*GPCQEHFPPSQ Trigger: CTGGCTGGGTGGAAAGTGCTCTTGGCACGGGCCTCAGCGTGCGTGTAGAGCGTGTGTACCTCTGGTCCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR CCA 72 bp | CCTGGAGAGAGTCCCTTAAAAGGGACTCCTGGCAGCTaGGATCAGAGCCCACTCCCAGGCAGACCCCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PGESPLKGTPGS*DQSPLPGRPQD Trigger: ATCCTGGGGTCTGCCTGGGAGTGGGCTCTGATCCCAGCTGCCAGGAGTCCCTTTTAAGGGACTCTCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR CCA 72 bp | AGGGCTCAACAGCTCCCCCAGGGGCTGCTTCAGTTCTaGAAGCATCTCCACAGCTGTGGCAGGACAACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RAQQLPQGLLQF*KHLHSCGRTTW Trigger: CCAGGTTGTCCTGCCACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCCCTGGGGGAGCTGTTGAGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACGCTCTACACGCACGCTGAGGCCCGTGCCAAGAGCACTTTCCACCCAGCCTCAAACCAGAGCACATaGGGAATGAGGCTCGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: HTLYTHAEARAKSTFHPASNQST*GMRLVS Trigger: GGACACGAGCCTCATTCCCAATGTGCTCTGGTTTGA...GGCTGGGTGGAAAGTGCTCTTGGCACGGGCCTCAGCGTGCGTGTAGAGCGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCAGGAGGCAGGCTGTACTGCCTGAGGCTCAGAGCACAGGGTCTGGGAGCTCCAGTCACTGCAGTTTaGTTCCAAGTTTGCGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PAGGRLYCLRLRAQGLGAPVTAV*FQVCAV Trigger: GACAGCGCAAACTTGGAACAAAACTGCAGTGACTGG...AGCTCCCAGACCCTGTGCTCTGAGCCTCAGGCAGTACAGCCTGCCTCCTGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGTGTACACAGGGCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACTCAAACCAGAGCACATaGGGAATGAGGCTCGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PCVHRAAAAEWPLQHELHSNQST*GMRLVS Trigger: GGACACGAGCCTCATTCCCAATGTGCTCTGGTTTGA...GTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTACACAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR TCA 72 bp | CCTACCTCCCTAGAAACCAGCCCTGGCCCTGGCATCTaGGGGGCTTGGACACGGCCTTTAACAAACACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PTSLETSPGPGI*GAWTRPLTNTK Trigger: CTTTGTGTTTGTTAAAGGCCGTGTCCAAGCCCCTCAGATGCCAGGGCCAGGGCTGGTTTCTAGGGAGGTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR GCA 72 bp | AGAAAGGCCGCGGTGAGGAGCCCTAGAGACAGCACGTaGCTCCACAGCAAGTCCAAGAACCTGGCGTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: RKAAVRSPRDST*LHSKSKNLALF Trigger: AAATAACGCCAGGTTCTTGGACTTGCTGTGGAGGCACGTGCTGTCTCTAGGGCTCCTCACCGCGGCCTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137248.8 |
||
| 3UTR CCA 72 bp | CCTGGGCCCTGTGTACACAGGGCAGCTGCTGCAGAGTaGCCTCTTCAGCATGAACTCCACAATCCCAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PGPCVHRAAAAE*PLQHELHNPKR Trigger: TCTTTTGGGATTGTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTACACAGGGCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR CCA 72 bp | TTCTGGAAGCATCTCCACAGCTGTGGCAGGACAACCTaGAGAGAGTCCCTTAAAAGGGACTCCTGGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FWKHLHSCGRTT*RESLKRDSWQL Trigger: CAGCTGCCAGGAGTCCCTTTTAAGGGACTCTCTCCAGGTTGTCCTGCCACAGCTGTGGAGATGCTTCCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGGCTGCTTCAGTTCTGGAAGCATCTCCACAGCTGTGGCAGGACAACCTGTATGTGCAGGCTCTTTaGTCAGGAAGGGATAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PGAASVLEASPQLWQDNLYVQAL*SGRDRG Trigger: TCCTCTATCCCTTCCTGACAAAAGAGCCTGCACATA...CAGGTTGTCCTGCCACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR GCA 72 bp | GTGTCTGCACTGCCACACAGCCAGCATCCCAGCTCCTaGTTCCTCTCTTTTGTTCAAGTGGGGATGAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: VSALPHSQHPSS*FLSFVQVGMKT Trigger: TGTCTTCATCCCCACTTGAACAAAAGAGAGGAAGCAGGAGCTGGGATGCTGGCTGTGTGGCAGTGCAGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR GCA 72 bp | ATTCGGAGGCTAGACGCAGCCACACCCACCAGTCACTaGAGTTTTGTTCCAAGTTTGCGCTGTCTGTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: IRRLDAATPTSH*SFVPSLRCLFL Trigger: CAGGAACAGACAGCGCAAACTTGGAACAAAACTGCAGTGACTGGTGGGTGTGGCTGCGTCTAGCCTCCGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| 3UTR CCA 72 bp | CTACCCGATGGCCAGACAAAAGGAGCTGTAAACGCTTaGGTGTGCTCACCCGTATGTGCAGGCTCTTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LPDGQTKGAVNA*VCSPVCAGSFV Trigger: GACAAAAGAGCCTGCACATACGGGTGAGCACACCCAAGCGTTTACAGCTCCTTTTGTCTGGCCATCGGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGGGCTGCTTCAGTTCTGGAAGCATCTCCACAGCTGTGGCAGGACAACCTGGAAAGCACCAAAAACTaGTGCTTCAGCAGCAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: PGAASVLEASPQLWQDNLESTKN*CFSSRL Trigger: TAACCTGCTGCTGAAGCACAAGTTTTTGGTGCTTTC...CAGGTTGTCCTGCCACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR GCA 72 bp | GATGGCCAGACAAAAGGAGCTGTAAACGCTTGGGTGTaGTCACCCGTATGTGCAGGCTCTTTTGTCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: DGQTKGAVNAWV*SPVCAGSFVRK Trigger: CTTCCTGACAAAAGAGCCTGCACATACGGGTGAGCACACCCAAGCGTTTACAGCTCCTTTTGTCTGGCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR GCA 72 bp | CCTTTAACAAACACAAAGGAAAGCACCAAAAACTTGTaGTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PLTNTKESTKNL*FSSRLGTSREK Trigger: TTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTTTTTGGTGCTTTCCTTTGTGTTTGTTAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGGGCTCAACAGGGTCACTGGCCGCCATaGAGCGGGGAGCGAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CFSSRLGTSREKRGRAQQGHWPP*SGERAL Trigger: CAGTGCTCGCTCCCCGCTTCATGGCGGCCAGTGACC...CTGTTGAGCCCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000137248.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCAAGGCATGGTGCAGGCCAGATTCGGAGGCTAGACGCAGCCACACCCACCCGAGAAAGGCCGCGGTaGGGAGCCCTAGAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PARHGAGQIRRLDAATPTRERPR*GALETA Trigger: TGCTGTCTCTAGGGCTCCTCACCGCGGCCTTTCTCG...GGTGGGTGTGGCTGCGTCTAGCCTCCGAATCTGGCCTGCACCATGCCTTGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
||
| CDS-3UTR CCA 90 bp | CTCTACACGCACGCTGAGGCCCGTGCCAAGAGCACTTTCCACCCAGCCAGGAGCGCAGGGTATTCGACGTaGGTGAGGGTCACTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LYTHAEARAKSTFHPARSAGYST*VRVTGR Trigger: GCGGCCAGTGACCCTCACCCACGTCGAATACCCTGC...GCTCCTGGCTGGGTGGAAAGTGCTCTTGGCACGGGCCTCAGCGTGCGTGTAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| CDS-3UTR TCA 90 bp | GCTCAACAGCTCCCCCAGGGGCTGCTTCAGTTCTGGAAGCATCTCCACAGCTGTGGTCACTGGCCGCCATaGAGCGGGGAGCGAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: AQQLPQGLLQFWKHLHSCGHWPP*SGERAL Trigger: CAGTGCTCGCTCCCCGCTTCATGGCGGCCAGTGACC...ACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCCCTGGGGGAGCTGTTGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000137248.8 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGTACACAGGGCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACGGTCACTGGCCGCCATaGAGCGGGGAGCGAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PCVHRAAAAEWPLQHELHGHWPP*SGERAL Trigger: CAGTGCTCGCTCCCCGCTTCATGGCGGCCAGTGACC...GTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTACACAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| CDS-3UTR TCA 90 bp | GGTGCTGACTCTGGGCCCTGCCCCAGACGAGGAAACACTGACAAGGGTTCTGGAAGCCAGTTGACGCCCTaGTTCAGTGCCAGTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GADSGPCPRRGNTDKGSGSQLTP*FSASPP Trigger: TGGGGGACTGGCACTGAATCAGGGCGTCAACTGGCT...TCCAGAACCCTTGTCAGTGTTTCCTCGTCTGGGGCAGGGCCCAGAGTCAGCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 |
||
| CDS-3UTR TCA 90 bp | CCAGGGGCTGCTTCAGTTCTGGAAGCATCTCCACAGCTGTGGCAGGACAACCTGCGAGAAAGGCCGCGGTaGGGAGCCCTAGAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGAASVLEASPQLWQDNLRERPR*GALETA Trigger: TGCTGTCTCTAGGGCTCCTCACCGCGGCCTTTCTCG...CAGGTTGTCCTGCCACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGTCCCTTAAAAGGGACTCCTGGCAGCTGGGATCAGAGCCCACTCCCAGGCGGAGATGGGCCAGGCTaGTATCCTGGGGAACAACGG | + |
|
Preference number: 4 (lower is better) Translates to: ESPLKGTPGSWDQSPLPGGDGPG*YPGEQR Trigger: CCGTTGTTCCCCAGGATAGCAGCCTGGCCCATCTCC...GCCTGGGAGTGGGCTCTGATCCCAGCTGCCAGGAGTCCCTTTTAAGGGACTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000123202.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGGGCTCAACAGCTCCCCCACATGAACTGGGAATaGCTGGAGGGCATCCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRLGTSREKRGRAQQLPHMNWE*LEGIPY Trigger: GTACGGGATGCCCTCCAGCCATTCCCAGTTCATGTG...GGGGAGCTGTTGAGCCCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000137248.8 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGTACACAGGGCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACAGCCAGTTGACGCCCTaGTTCAGTGCCAGTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PCVHRAAAAEWPLQHELHSQLTP*FSASPP Trigger: TGGGGGACTGGCACTGAATCAGGGCGTCAACTGGCT...GTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTACACAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 |
||
| CDS-3UTR CCA 90 bp | CATTCTGTCCATCCTGCAAGGCATGGTGCAGGCCAGATTCGGAGGCTAGACGCAGCAGGGTATTCGACGTaGGTGAGGGTCACTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: HSVHPARHGAGQIRRLDAAGYST*VRVTGR Trigger: GCGGCCAGTGACCCTCACCCACGTCGAATACCCTGC...TGCGTCTAGCCTCCGAATCTGGCCTGCACCATGCCTTGCAGGATGGACAGAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCTGCCCCAGACGAGGAAACACTGACAAGGGTTCTGGAATGGCGATGGTGGCCTAGAGACAGCACGTaGCTCCACAGCAAGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPAPDEETLTRVLEWRWWPRDST*LHSKSK Trigger: CTTGGACTTGCTGTGGAGGCACGTGCTGTCTCTAGG...CCACCATCGCCATTCCAGAACCCTTGTCAGTGTTTCCTCGTCTGGGGCAGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
||
| CDS-3UTR CCA 90 bp | AGCACATTGGGAATGAGGCTCGTGTCCCGGATGAGGAAAAACTCGGAGATGGGCGCAGGGTATTCGACGTaGGTGAGGGTCACTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: STLGMRLVSRMRKNSEMGAGYST*VRVTGR Trigger: GCGGCCAGTGACCCTCACCCACGTCGAATACCCTGC...GCCCATCTCCGAGTTTTTCCTCATCCGGGACACGAGCCTCATTCCCAATGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGGGCTCAACAGGGAGTGAGGATTTCCTaGGTGATGATGAACCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CFSSRLGTSREKRGRAQQGVRIS*VMMNQA Trigger: CGCCTGGTTCATCATCACGCAGGAAATCCTCACTCC...CTGTTGAGCCCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000123202.8 |
||
| CDS-3UTR CCA 90 bp | TCTACACGCACGCTGAGGCCCGTGCCAAGAGCACTTTCCACCCAGCCAGGAGCTTCCTGGCTTCTGCCCTaGTTACTGTGTACTCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: STRTLRPVPRALSTQPGASWLLP*LLCTQT Trigger: GGTTTGAGTACACAGTAACCAGGGCAGAAGCCAGGA...AGCTCCTGGCTGGGTGGAAAGTGCTCTTGGCACGGGCCTCAGCGTGCGTGTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
||
| CDS-3UTR CCA 90 bp | AAACGCTTGGGTGTGCTCACCCGTATGTGCAGGCTCTTTTGTCAGGAAGGGATAGCAGGGTATTCGACGTaGGTGAGGGTCACTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KRLGVLTRMCRLFCQEGIAGYST*VRVTGR Trigger: GCGGCCAGTGACCCTCACCCACGTCGAATACCCTGC...TATCCCTTCCTGACAAAAGAGCCTGCACATACGGGTGAGCACACCCAAGCGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000137248.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGTCCCTTAAAAGGGACTCCTGGCAGCTGGGATCAGAGCCCACTCCCAGGCTCCTGGCTTCTGCCCTaGTTACTGTGTACTCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: ESPLKGTPGSWDQSPLPGSWLLP*LLCTQT Trigger: GGTTTGAGTACACAGTAACCAGGGCAGAAGCCAGGA...GCCTGGGAGTGGGCTCTGATCCCAGCTGCCAGGAGTCCCTTTTAAGGGACTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
||
| CDS-3UTR GCA 90 bp | CATTCTGTCCATCCTGCAAGGCATGGTGCAGGCCAGATTCGGAGGCTAGACGCAGGAGTGAGGATTTCCTaGGTGATGATGAACCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HSVHPARHGAGQIRRLDAGVRIS*VMMNQA Trigger: CGCCTGGTTCATCATCACGCAGGAAATCCTCACTCC...TGCGTCTAGCCTCCGAATCTGGCCTGCACCATGCCTTGCAGGATGGACAGAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000123202.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGCAGGCTGTACTGCCTGAGGCTCAGAGCACAGGGTCTGGGAGCTAACCTGGTTTTGTTCCAAGTTTaGGCTGTCTGTTCCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGRLYCLRLRAQGLGANLVLFQV*AVCSWL Trigger: AAGCCAGGAACAGACAGCGCAAACTTGGAACAAAAC...CAGGTTAGCTCCCAGACCCTGTGCTCTGAGCCTCAGGCAGTACAGCCTGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
||
| CDS-3UTR CCA 90 bp | TCTACACGCACGCTGAGGCCCGTGCCAAGAGCACTTTCCACCCAGCCAGGAGCTGCAAGTCCAAGAACCTaGCGTTATTTGTTTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: STRTLRPVPRALSTQPGAASPRT*RYLFGA Trigger: TGCACCAAACAAATAACGCCAGGTTCTTGGACTTGC...AGCTCCTGGCTGGGTGGAAAGTGCTCTTGGCACGGGCCTCAGCGTGCGTGTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGGGCTGCTTCAGTTCTGGAAGCATCTCCACAGCTGTGGCAGGACAACCTGTCCTGGCTTCTGCCCTaGTTACTGTGTACTCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: PGAASVLEASPQLWQDNLSWLLP*LLCTQT Trigger: GGTTTGAGTACACAGTAACCAGGGCAGAAGCCAGGA...CAGGTTGTCCTGCCACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
||
| 3UTR CAA 72 bp | ACGCTTGGGTGTGCTCACCCGTATGTGCAGGCTCTTTaGTCAGGAAGGGATAGAGGACCGGAGAAAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLGCAHPYVQAL*SGRDRGPEKAL Trigger: AAGGGCTTTCTCCGGTCCTCTATCCCTTCCTGACAAAAGAGCCTGCACATACGGGTGAGCACACCCAAGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| 3UTR CAA 72 bp | CCTAGAAACCAGCCCTGGCCCTGGCATCTGAGGGGCTaGGACACGGCCTTTAACAAACACAAAGGAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRNQPWPWHLRG*DTAFNKHKGKH Trigger: GTGCTTTCCTTTGTGTTTGTTAAAGGCCGTGTCCAAGCCCCTCAGATGCCAGGGCCAGGGCTGGTTTCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGTCCCTTAAAAGGGACTCCTGGCAGCTGGGATCAGAGCCCACTCCCAGGCGTTTTGTTCCAAGTTTaGGCTGTCTGTTCCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESPLKGTPGSWDQSPLPGVLFQV*AVCSWL Trigger: AAGCCAGGAACAGACAGCGCAAACTTGGAACAAAAC...GCCTGGGAGTGGGCTCTGATCCCAGCTGCCAGGAGTCCCTTTTAAGGGACTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
||
| 3UTR CAA 72 bp | GCTACCCGATGGCCAGACAAAAGGAGCTGTAAACGCTaGGGTGTGCTCACCCGTATGTGCAGGCTCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATRWPDKRSCKR*GVLTRMCRLFC Trigger: ACAAAAGAGCCTGCACATACGGGTGAGCACACCCAAGCGTTTACAGCTCCTTTTGTCTGGCCATCGGGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGGGCTCAACAGCTCCCCCTGGCGTTATTTGTTTaGTGCATTCTTAAATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRLGTSREKRGRAQQLPLALFV*CILKYR Trigger: CCTGTATTTAAGAATGCACCAAACAAATAACGCCAG...GGGGAGCTGTTGAGCCCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
||
| CDS-3UTR CCA 90 bp | AACAGCTCCCCCAGGGGCTGCTTCAGTTCTGGAAGCATCTCCACAGCTGTGGCAGCAAGTCCAAGAACCTaGCGTTATTTGTTTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSSPRGCFSSGSISTAVAASPRT*RYLFGA Trigger: TGCACCAAACAAATAACGCCAGGTTCTTGGACTTGC...TGCCACAGCTGTGGAGATGCTTCCAGAACTGAAGCAGCCCCTGGGGGAGCTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
||
| CDS-3UTR TCA 90 bp | ACGGCCTTTAACAAACACAAAGGAAAGCACCAAAAACTTGTGCTTCAGCAGCAGGGTATTCGACGTGGGTaGGGGTCACTGGCCGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TAFNKHKGKHQKLVLQQQGIRRG*GSLAAM Trigger: CATGGCGGCCAGTGACCCTCACCCACGTCGAATACC...CTGCTGCTGAAGCACAAGTTTTTGGTGCTTTCCTTTGTGTTTGTTAAAGGCCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000137248.8 |
||
| 3UTR CAA 72 bp | TCTGCCCTGGTTACTGTGTACTCAAACCAGAGCACATaGGGAATGAGGCTCGTGTCCCGGATGAGGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SALVTVYSNQST*GMRLVSRMRKN Trigger: GTTTTTCCTCATCCGGGACACGAGCCTCATTCCCAATGTGCTCTGGTTTGAGTACACAGTAACCAGGGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000137248.8 ENSMUST00000155196.2 |
||
| CDS-3UTR TCA 90 bp | ATTTCATTTGATTTCTTAAACCACCTCACACTTGGCTTGTCTCAGGCAAAAAGTGGTCACTGGCCGCCATaGAGCGGGGAGCGAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ISFDFLNHLTLGLSQAKSGHWPP*SGERAL Trigger: CAGTGCTCGCTCCCCGCTTCATGGCGGCCAGTGACC...ACTTTTTGCCTGAGACAAGCCAAGTGTGAGGTGGTTTAAGAAATCAAATGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000137248.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACAATCCCAAAAGAATATCTGTTCCTGGCTTCTaGCCTGGTTACTGTGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: AAAAEWPLQHELHNPKRISVPGF*PGYCVL Trigger: GAGTACACAGTAACCAGGGCAGAAGCCAGGAACAGA...TATTCTTTTGGGATTGTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
||
| 3UTR CAA 72 bp | CGGCCTTTAACAAACACAAAGGAAAGCACCAAAAACTaGTGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLTNTKESTKN*CFSSRLGTSRE Trigger: CTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTTTTTGGTGCTTTCCTTTGTGTTTGTTAAAGGCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 ENSMUST00000137248.8 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCTTCAGCATGAACTCCACAATCCCAAAAGAATAAATAGTGCGCATTCCCCTAGAGACAGCACGTaGCTCCACAGCAAGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WPLQHELHNPKRINSAHSPRDST*LHSKSK Trigger: CTTGGACTTGCTGTGGAGGCACGTGCTGTCTCTAGG...GGAATGCGCACTATTTATTCTTTTGGGATTGTGGAGTTCATGCTGAAGAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCATTTGATTTCTTAAACCACCTCACACTTGGCTTGTCTCAGGCAAAAAGTCGAGAAAGGCCGCGGTaGGGAGCCCTAGAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISFDFLNHLTLGLSQAKSRERPR*GALETA Trigger: TGCTGTCTCTAGGGCTCCTCACCGCGGCCTTTCTCG...ACTTTTTGCCTGAGACAAGCCAAGTGTGAGGTGGTTTAAGAAATCAAATGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS-3UTR GCA 90 bp | CATTCTGTCCATCCTGCAAGGCATGGTGCAGGCCAGATTCGGAGGCTAGACGCAGCGTTATTTGTTTGGTaGATTCTTAAATACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: HSVHPARHGAGQIRRLDAALFVW*ILKYRK Trigger: CTTCCTGTATTTAAGAATGCACCAAACAAATAACGC...TGCGTCTAGCCTCCGAATCTGGCCTGCACCATGCCTTGCAGGATGGACAGAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS-3UTR GCA 90 bp | GTACACAGGGCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACAATCCCGCGTTATTTGTTTGGTaGATTCTTAAATACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VHRAAAAEWPLQHELHNPALFVW*ILKYRK Trigger: CTTCCTGTATTTAAGAATGCACCAAACAAATAACGC...GGGATTGTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS-3UTR GCA 90 bp | GAACTCCACAATCCCAAAAGAATAAATAGTGCGCATTCCGCTACCTGCACTTCCTCTGTTCCTGGCTTCTaGCCTGGTTACTGTGTACTC | + |
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Preference number: 4 (lower is better) Translates to: ELHNPKRINSAHSATCTSSVPGF*PGYCVL Trigger: GAGTACACAGTAACCAGGGCAGAAGCCAGGAACAGA...GGAAGTGCAGGTAGCGGAATGCGCACTATTTATTCTTTTGGGATTGTGGAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS-3UTR CCA 90 bp | TGCTTCCTCTCTTTTGTTCAAGTGGGGATGAAGACAGACTGCTACCCGATGGCCCTGGCGTTATTTGTTTaGTGCATTCTTAAATACAGG | + |
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Preference number: 4 (lower is better) Translates to: CFLSFVQVGMKTDCYPMALALFV*CILKYR Trigger: CCTGTATTTAAGAATGCACCAAACAAATAACGCCAG...GGCCATCGGGTAGCAGTCTGTCTTCATCCCCACTTGAACAAAAGAGAGGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS-3UTR GCA 90 bp | TTTAACAAACACAAAGGAAAGCACCAAAAACTTGTGCTTCAGCAGCAGGTTAGGTCTGTTCCTGGCTTCTaGCCTGGTTACTGTGTACTC | + |
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Preference number: 4 (lower is better) Translates to: FNKHKGKHQKLVLQQQVRSVPGF*PGYCVL Trigger: GAGTACACAGTAACCAGGGCAGAAGCCAGGAACAGA...CCTAACCTGCTGCTGAAGCACAAGTTTTTGGTGCTTTCCTTTGTGTTTGTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS-3UTR CCA 90 bp | CACAAAGGAAAGCACCAAAAACTTGTGCTTCAGCAGCAGGTTAGGGACCTCCAGCTGGCGTTATTTGTTTaGTGCATTCTTAAATACAGG | + |
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Preference number: 4 (lower is better) Translates to: HKGKHQKLVLQQQVRDLQLALFV*CILKYR Trigger: CCTGTATTTAAGAATGCACCAAACAAATAACGCCAG...CTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTTTTTGGTGCTTTCCTTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS-3UTR CCA 90 bp | TGGCCTCTTCAGCATGAACTCCACAATCCCAAAAGAATAAATAGTGCGCATTCCGCAAGTCCAAGAACCTaGCGTTATTTGTTTGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: WPLQHELHNPKRINSAHSASPRT*RYLFGA Trigger: TGCACCAAACAAATAACGCCAGGTTCTTGGACTTGC...GGAATGCGCACTATTTATTCTTTTGGGATTGTGGAGTTCATGCTGAAGAGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS-3UTR GCA 90 bp | CACAAAGGAAAGCACCAAAAACTTGTGCTTCAGCAGCAGGTTAGGGACCTCCAGGCGTTATTTGTTTGGTaGATTCTTAAATACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: HKGKHQKLVLQQQVRDLQALFVW*ILKYRK Trigger: CTTCCTGTATTTAAGAATGCACCAAACAAATAACGC...CTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTTTTTGGTGCTTTCCTTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS TCA 90 bp | CCAGGAGGTGGCCAGACAGATCACCTGCAGGGTATTCGACGTGGGTaGGGGTCACTGGCCGCCATGAAGCGGGGAGCGAGCACTGTCCGT | + |
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Preference number: 5 (lower is better) Translates to: PGGGQTDHLQGIRRG*GSLAAMKRGASTVR Trigger: ACGGACAGTGCTCGCTCCCCGCTTCATGGCGGCCAGTGACCCTCACCCACGTCGAATACCCTGCAGGTGATCTGTCTGGCCACCTCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000137248.8 ENSMUST00000155196.2 |
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| CDS-3UTR CAA 90 bp | ACACGCACGCTGAGGCCCGTGCCAAGAGCACTTTCCACCCAGCCAGGAGCTGGCTCAAACCAGAGCACATaGGGAATGAGGCTCGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: TRTLRPVPRALSTQPGAGSNQST*GMRLVS Trigger: GGACACGAGCCTCATTCCCAATGTGCTCTGGTTTGA...GCCAGCTCCTGGCTGGGTGGAAAGTGCTCTTGGCACGGGCCTCAGCGTGCGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS GCA 90 bp | ATGGGCCAGGCTGCTATCCTGGGGAACAACGGAGTGAGGATTTCCTaGGTGATGATGAACCAGGCGACGGCCATGAGGCTTCCAGCCACG | + |
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Preference number: 5 (lower is better) Translates to: MGQAAILGNNGVRIS*VMMNQATAMRLPAT Trigger: CGTGGCTGGAAGCCTCATGGCCGTCGCCTGGTTCATCATCACGCAGGAAATCCTCACTCCGTTGTTCCCCAGGATAGCAGCCTGGCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000123202.8 |
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| CDS-3UTR CAA 90 bp | AACTTGTGCTTCAGCAGCAGGTTAGGGACCTCCAGGGAGAAACGGGGGAGGGCTTCCTGGATGACGTGTTaGATCAGCCAGTTGACGCCC | + |
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Preference number: 5 (lower is better) Translates to: NLCFSSRLGTSREKRGRASWMTC*ISQLTP Trigger: GGGCGTCAACTGGCTGATCAAACACGTCATCCAGGA...AGCCCTCCCCCGTTTCTCCCTGGAGGTCCCTAACCTGCTGCTGAAGCACAAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 |
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| CDS TCA 90 bp | GGCCGAGGCTCCTGGATGACGTGTTTGATCAGCCAGTTGACGCCCTaGTTCAGTGCCAGTCCCCCAAGGAATGAAATCGTGTGTAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: GRGSWMTCLISQLTP*FSASPPRNEIVCSS Trigger: GGAGCTACACACGATTTCATTCCTTGGGGGACTGGCACTGAATCAGGGCGTCAACTGGCTGATCAAACACGTCATCCAGGAGCCTCGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 |
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| CDS GCA 90 bp | GAGGCTCGTGTCCCGGATGAGGAAAAACTCGGAGATGGGCCAGGCTaGTATCCTGGGGAACAACGGAGTGAGGATTTCCTGCGTGATGAT | + |
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Preference number: 5 (lower is better) Translates to: EARVPDEEKLGDGPG*YPGEQRSEDFLRDD Trigger: ATCATCACGCAGGAAATCCTCACTCCGTTGTTCCCCAGGATAGCAGCCTGGCCCATCTCCGAGTTTTTCCTCATCCGGGACACGAGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000123202.8 |
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| CDS-3UTR CAA 90 bp | AAAAGGCTCCACTTGGTGACTCTGGTCTGTAGAGGTCTCTGCTTCACCCCTCCATCCTGGATGACGTGTTaGATCAGCCAGTTGACGCCC | + |
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Preference number: 5 (lower is better) Translates to: KRLHLVTLVCRGLCFTPPSWMTC*ISQLTP Trigger: GGGCGTCAACTGGCTGATCAAACACGTCATCCAGGA...TGGAGGGGTGAAGCAGAGACCTCTACAGACCAGAGTCACCAAGTGGAGCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 |
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| CDS-3UTR CAA 90 bp | TTGGTGACTCTGGTCTGTAGAGGTCTCTGCTTCACCCCTCCATCCATCATTCTGTCAAACCAGAGCACATaGGGAATGAGGCTCGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: LVTLVCRGLCFTPPSIILSNQST*GMRLVS Trigger: GGACACGAGCCTCATTCCCAATGTGCTCTGGTTTGA...CAGAATGATGGATGGAGGGGTGAAGCAGAGACCTCTACAGACCAGAGTCACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS-3UTR CAA 90 bp | CACTTGGTGACTCTGGTCTGTAGAGGTCTCTGCTTCACCCCTCCATCCATCATTTCAAACCAGAGCACATaGGGAATGAGGCTCGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: HLVTLVCRGLCFTPPSIISNQST*GMRLVS Trigger: GGACACGAGCCTCATTCCCAATGTGCTCTGGTTTGA...AATGATGGATGGAGGGGTGAAGCAGAGACCTCTACAGACCAGAGTCACCAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS-3UTR CAA 90 bp | CCCTGTGTACACAGGGCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACAGAACCTGGCGTTATTaGTTTGGTGCATTCTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: PCVHRAAAAEWPLQHELHRTWRY*FGAFLN Trigger: ATTTAAGAATGCACCAAACAAATAACGCCAGGTTCT...GTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTACACAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS-3UTR CAA 90 bp | GTACACAGGGCAGCTGCTGCAGAGTGGCCTCTTCAGCATGAACTCCACAATCCCAGAACCTGGCGTTATTaGTTTGGTGCATTCTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: VHRAAAAEWPLQHELHNPRTWRY*FGAFLN Trigger: ATTTAAGAATGCACCAAACAAATAACGCCAGGTTCT...GGGATTGTGGAGTTCATGCTGAAGAGGCCACTCTGCAGCAGCTGCCCTGTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS-3UTR CAA 90 bp | CACTTGGTGACTCTGGTCTGTAGAGGTCTCTGCTTCACCCCTCCATCCATCATTAGAACCTGGCGTTATTaGTTTGGTGCATTCTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: HLVTLVCRGLCFTPPSIIRTWRY*FGAFLN Trigger: ATTTAAGAATGCACCAAACAAATAACGCCAGGTTCT...AATGATGGATGGAGGGGTGAAGCAGAGACCTCTACAGACCAGAGTCACCAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000123202.8 |
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| CDS TCA 72 bp | AGGGTATTCGACGTGGGTGAGGGTCACTGGCCGCCATaGAGCGGGGAGCGAGCACTGTCCGTCCGCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: RVFDVGEGHWPP*SGERALSVRCH Trigger: ATGGCAGCGGACGGACAGTGCTCGCTCCCCGCTTCATGGCGGCCAGTGACCCTCACCCACGTCGAATACCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 |
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| CDS TCA 72 bp | AGGGTATTCGACGTGGGTGAGGGTCACTGGCCGCCATaGAGCGGGGAGCGAGCACTGTCCGTCCGCTGCCNN | + |
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Preference number: 6 (lower is better) Translates to: RVFDVGEGHWPP*SGERALSVRCX Trigger: NNGGCAGCGGACGGACAGTGCTCGCTCCCCGCTTCATGGCGGCCAGTGACCCTCACCCACGTCGAATACCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137248.8 |
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| CDS GCA 72 bp | GGAATGGCTGGAGGGCATCCCGTACTTAGTGCCCACTaGTGTATGTGGGCCTCCACAGGGCCGAGGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GMAGGHPVLSAH*CMWASTGPRLL Trigger: CAGGAGCCTCGGCCCTGTGGAGGCCCACATACAGCAGTGGGCACTAAGTACGGGATGCCCTCCAGCCATTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 |
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| CDS CCA 72 bp | AGGTGGCCAGACAGATCACCTGCAGGGTATTCGACGTaGGTGAGGGTCACTGGCCGCCATGAAGCGGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RWPDRSPAGYST*VRVTGRHEAGS Trigger: GCTCCCCGCTTCATGGCGGCCAGTGACCCTCACCCACGTCGAATACCCTGCAGGTGATCTGTCTGGCCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 ENSMUST00000137248.8 ENSMUST00000155196.2 |
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| CDS GCA 72 bp | GGAATGGCTGGAGGGCATCCCGTACTTAGTGCCCACTaGTGTATGTGGGCCGTGTGTAGCTCCCGCTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: GMAGGHPVLSAH*CMWAVCSSRLN Trigger: ATTCAAGCGGGAGCTACACACGGCCCACATACAGCAGTGGGCACTAAGTACGGGATGCCCTCCAGCCATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137248.8 ENSMUST00000155196.2 |
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| CDS GCA 72 bp | GCTGCTATCCTGGGGAACAACGGAGTGAGGATTTCCTaGGTGATGATGAACCAGGCGACGGCCATGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: AAILGNNGVRIS*VMMNQATAMRL Trigger: AAGCCTCATGGCCGTCGCCTGGTTCATCATCACGCAGGAAATCCTCACTCCGTTGTTCCCCAGGATAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000123202.8 |
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| CDS GCA 72 bp | GTCCCGGATGAGGAAAAACTCGGAGATGGGCCAGGCTaGTATCCTGGGGAACAACGGAGTGAGGATTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VPDEEKLGDGPG*YPGEQRSEDFL Trigger: CAGGAAATCCTCACTCCGTTGTTCCCCAGGATAGCAGCCTGGCCCATCTCCGAGTTTTTCCTCATCCGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000123202.8 |
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| CDS TCA 72 bp | TCCTGGATGACGTGTTTGATCAGCCAGTTGACGCCCTaGTTCAGTGCCAGTCCCCCAAGGAATGAAATCGTG | + |
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Preference number: 6 (lower is better) Translates to: SWMTCLISQLTP*FSASPPRNEIV Trigger: CACGATTTCATTCCTTGGGGGACTGGCACTGAATCAGGGCGTCAACTGGCTGATCAAACACGTCATCCAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028209.15 ENSMUST00000113612.10 |
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