Pregenerated sensors for DOLK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075419Ensembl transcript IDs: ENSMUST00000100219.5
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAATCTGCTTTCCATCTCTTGATTCTTGGTGTCCAGGTGGCTAGCTaGTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAG | + |
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Preference number: 1 (lower is better) Translates to: KSAFHLLILGVQVAS*CGDHSFYFPVSPSQ Trigger: CTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCAGCTAGCCACCTGGACACCAAGAATCAAGAGATGGAAAGCAGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| 3UTR GCA 72 bp | TTCCATCTCTTGATTCTTGGTGTCCAGGTGGCTAGCTaGTGTGGGGACCATTCATTCTATTTCCCTGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: FHLLILGVQVAS*CGDHSFYFPVS Trigger: GGAAACAGGGAAATAGAATGAATGGTCCCCACAGCAGCTAGCCACCTGGACACCAAGAATCAAGAGATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR TCA 90 bp | CTAGCTGCTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCGTGCCTCCCCAGGAGTaGAGCATCGGGGCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LAAVGTIHSISLFPHHSCVPPQE*SIGAAG Trigger: ACCTGCTGCCCCGATGCTTCACTCCTGGGGAGGCAC...GCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCAGCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR TCA 90 bp | TGCTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCTACTGGGGGGTTCCTACGAATaGGCCAGTGCAGCCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: CCGDHSFYFPVSPSQLLLGGSYE*ASAARA Trigger: TGCCCTGGCTGCACTGGCTCATTCGTAGGAACCCCC...CAGTAGCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR GCA 90 bp | CTAGCTGCTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCGGGGACCAGGGCTCTTaGTCCTTCCAGGCTGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LAAVGTIHSISLFPHHSCGDQGS*SFQAVL Trigger: AAGGACAGCCTGGAAGGAGCAAGAGCCCTGGTCCCC...GCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCAGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CCA 90 bp | AGGTGGCTAGCTGCTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACCTGCCAGGCACACAGTaGCGGCCACATACAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RWLAAVGTIHSISLFPHHLPGTQ*RPHTAV Trigger: CACTGCTGTATGTGGCCGCCACTGTGTGCCTGGCAG...GTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCAGCTAGCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR GCA 90 bp | CTAGCTGCTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCCAGGAAGATGAAGACTaGCAGGCACACAGTGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LAAVGTIHSISLFPHHSCQEDED*QAHSGG Trigger: GCCGCCACTGTGTGCCTGGCAGTCTTCATCTTCCTG...GCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCAGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR TCA 90 bp | AAATCTGCTTTCCATCTCTTGATTCTTGGTGTCCAGGTGGCTAGCTGCTGTGGGGGCAGCGCTCCTTCATaGCTAGCCCAAGCAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSAFHLLILGVQVASCCGGSAPS*LAQAKA Trigger: TGCCTTTGCTTGGGCTAGTCATGAAGGAGCGCTGCC...CCCACAGCAGCTAGCCACCTGGACACCAAGAATCAAGAGATGGAAAGCAGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR GCA 90 bp | CTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCTACTGGTACTGGAAAACGGCATTaGCCTGCTGGAGCAGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: LWGPFILFPCFPITAATGTGKRH*PAGAAG Trigger: ACCGGCTGCTCCAGCAGGGCAATGCCGTTTTCCAGT...ACCAGTAGCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR GCA 90 bp | CTAGCTGCTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCGAAGTATGGGTTCCCTaGAGTCTGGCAGCGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LAAVGTIHSISLFPHHSCEVWVP*SLAALL Trigger: AAGGAGCGCTGCCAGACTGCAGGGAACCCATACTTC...GCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCAGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR GCA 90 bp | CTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCTACTGGTGGAGAAGAGGGCCACTaGCATGCCAGTAGCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LWGPFILFPCFPITAATGGEEGH*HASSCN Trigger: GTTGCAGCTACTGGCATGGCAGTGGCCCTCTTCTCC...ACCAGTAGCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR GCA 90 bp | AGGTGGCTAGCTGCTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACACCCAATACCAGCAGTaGCTCCCCAGGAGTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RWLAAVGTIHSISLFPHHTQYQQ*LPRSEA Trigger: TGCTTCACTCCTGGGGAGGCACTGCTGGTATTGGGT...GTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCAGCTAGCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CCA 90 bp | TGCTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCTACTGGGGTTCCCTGCAGTCTaGCAGCGCTCCTTCATGACT | + |
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Preference number: 4 (lower is better) Translates to: CCGDHSFYFPVSPSQLLLGFPAV*QRSFMT Trigger: AGTCATGAAGGAGCGCTGCCAGACTGCAGGGAACCC...CAGTAGCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CCA 90 bp | CTAGCTGCTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCCAGGAAGAAGTCCACTaGGTCCCCCTGGCTTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: LAAVGTIHSISLFPHHSCQEEVH*VPLAFS Trigger: ACTGAAAGCCAGGGGGACCCAGTGGACTTCTTCCTG...GCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCAGCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CCA 90 bp | CTAGCTGCTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCGACCGCTTAGCATTCTaGTACAGCACCACCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAAVGTIHSISLFPHHSCDRLAF*YSTTRQ Trigger: CTGCCTGGTGGTGCTGTACCAGAATGCTAAGCGGTC...GCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCAGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR TCA 90 bp | AAATCTGCTTTCCATCTCTTGATTCTTGGTGTCCAGGTGGCTAGCTGCTGTGGGAGGCTTCGCAGAGTGTaGCCCAAGGGCTTTATTCGG | + |
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Preference number: 4 (lower is better) Translates to: KSAFHLLILGVQVASCCGRLRRV*PKGFIR Trigger: CCGAATAAAGCCCTTGGGTCACACTCTGCGAAGCCT...CCCACAGCAGCTAGCCACCTGGACACCAAGAATCAAGAGATGGAAAGCAGATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR GCA 90 bp | CTAGCTGCTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCATGGTAGGCGCCCTGTaGTTCTTGGACTCAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LAAVGTIHSISLFPHHSCMVGAL*FLDSED Trigger: GTCTTCTGAGTCCAAGAAGCACAGGGCGCCTACCAT...GCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCAGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CCA 90 bp | CTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCTACTGGTGAAGCGCTCGAAGTATaGGTTCCCTGCAGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LWGPFILFPCFPITAATGEALEV*VPCSLA Trigger: TGCCAGACTGCAGGGAACCCATACTTCGAGCGCTTC...ACCAGTAGCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR TCA 90 bp | CTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCTACTGGTAGAGGCCCAGGTGCCTaGATCCATGAAGACAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: LWGPFILFPCFPITAATGRGPGA*IHEDKE Trigger: CTCTTTGTCTTCATGGATTCAGGCACCTGGGCCTCT...ACCAGTAGCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CCA 90 bp | CTAGCTGCTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCACACAGGTCATGAGGTaGAAGAAGATGGAAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LAAVGTIHSISLFPHHSCTQVMR*KKMEEA Trigger: GGCCTCTTCCATCTTCTTCCACCTCATGACCTGTGT...GCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCAGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR TCA 90 bp | CAACTTTCTGGCTTCATCTTCCTGGATGAAGCAAAATCTGCTTTCCATCTCTTGGCCCAAGCAAAGGCATaGCCATGGAGGCCGGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QLSGFIFLDEAKSAFHLLAQAKA*PWRPAV Trigger: TACTGCCGGCCTCCATGGTCATGCCTTTGCTTGGGC...CAAGAGATGGAAAGCAGATTTTGCTTCATCCAGGAAGATGAAGCCAGAAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CCA 90 bp | AACAACTTTCTGGCTTCATCTTCCTGGATGAAGCAAAATCTGCTTTCCATCTCTACGGCATTGCCCTGCTaGAGCAGCCGGTCCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: NNFLASSSWMKQNLLSISTALPC*SSRSHL Trigger: CAAGTGGGACCGGCTGCTCCAGCAGGGCAATGCCGT...AGAGATGGAAAGCAGATTTTGCTTCATCCAGGAAGATGAAGCCAGAAAGTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CCA 90 bp | CTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCTACTGGTTGGTGCTGCCAAATATaGAGGCCACAGTATCACCCA | + |
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Preference number: 4 (lower is better) Translates to: LWGPFILFPCFPITAATGWCCQI*RPQYHP Trigger: TGGGTGATACTGTGGCCTCCATATTTGGCAGCACCA...ACCAGTAGCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR TCA 90 bp | TTCCATCTCTTGATTCTTGGTGTCCAGGTGGCTAGCTGCTGTGGGGACCATTCAAGGAGATTGTCTATCTaGGTAGTGTACGCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FHLLILGVQVASCCGDHSRRLSI*VVYASR Trigger: TCTGGAAGCGTACACTACTCAGATAGACAATCTCCT...TGAATGGTCCCCACAGCAGCTAGCCACCTGGACACCAAGAATCAAGAGATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CCA 90 bp | CTAGCTGCTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCGAGCGCTTGATGAGTTaGTTAAGGACGAAGCTAATG | + |
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Preference number: 4 (lower is better) Translates to: LAAVGTIHSISLFPHHSCERLMS*LRTKLM Trigger: CATTAGCTTCGTCCTTAACCAACTCATCAAGCGCTC...GCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCAGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CCA 90 bp | AACAACTTTCTGGCTTCATCTTCCTGGATGAAGCAAAATCTGCTTTCCATCTCTTCCACTGGGTCCCCCTaGCTTTCAGTCAGAGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: NNFLASSSWMKQNLLSISSTGSP*LSVRER Trigger: GCGCTCTCTGACTGAAAGCCAGGGGGACCCAGTGGA...AGAGATGGAAAGCAGATTTTGCTTCATCCAGGAAGATGAAGCCAGAAAGTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CCA 90 bp | CAACTTTCTGGCTTCATCTTCCTGGATGAAGCAAAATCTGCTTTCCATCTCTTGGCGCCCTGTGCTTCTTaGACTCAGAAGACGACCGCT | + |
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Preference number: 4 (lower is better) Translates to: QLSGFIFLDEAKSAFHLLAPCAS*TQKTTA Trigger: AGCGGTCGTCTTCTGAGTCCAAGAAGCACAGGGCGC...CAAGAGATGGAAAGCAGATTTTGCTTCATCCAGGAAGATGAAGCCAGAAAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| 3UTR CAA 72 bp | ATCTTCCTGGATGAAGCAAAATCTGCTTTCCATCTCTaGATTCTTGGTGTCCAGGTGGCTAGCTGCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: IFLDEAKSAFHL*ILGVQVASCCG Trigger: CCCACAGCAGCTAGCCACCTGGACACCAAGAATCAAGAGATGGAAAGCAGATTTTGCTTCATCCAGGAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR GCA 90 bp | CAACTTTCTGGCTTCATCTTCCTGGATGAAGCAAAATCTGCTTTCCATCTCTTGGTATCGGTCCCACACTaGAGCGTGGATGCTCAACAC | + |
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Preference number: 4 (lower is better) Translates to: QLSGFIFLDEAKSAFHLLVSVPH*SVDAQH Trigger: GTGTTGAGCATCCACGCTGCAGTGTGGGACCGATAC...CAAGAGATGGAAAGCAGATTTTGCTTCATCCAGGAAGATGAAGCCAGAAAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR GCA 90 bp | GGCTTCATCTTCCTGGATGAAGCAAAATCTGCTTTCCATCTCTTGATTCTTGGTTGCCATGCCAGTAGCTaGAACCACAATGCCGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: GFIFLDEAKSAFHLLILGCHASS*NHNAEA Trigger: CGCTTCGGCATTGTGGTTGCAGCTACTGGCATGGCA...ACCAAGAATCAAGAGATGGAAAGCAGATTTTGCTTCATCCAGGAAGATGAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR TCA 90 bp | AACAACTTTCTGGCTTCATCTTCCTGGATGAAGCAAAATCTGCTTTCCATCTCTGTGGCCGGTCAAAGATaGTGCCCGGGATATAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: NNFLASSSWMKQNLLSISVAGQR*CPGYKW Trigger: CCACTTATATCCCGGGCATCATCTTTGACCGGCCAC...AGAGATGGAAAGCAGATTTTGCTTCATCCAGGAAGATGAAGCCAGAAAGTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR TCA 90 bp | AACAACTTTCTGGCTTCATCTTCCTGGATGAAGCAAAATCTGCTTTCCATCTCTCCAGCACACAGGTCATaGGGTGGAAGAAGATGGAAG | + |
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Preference number: 4 (lower is better) Translates to: NNFLASSSWMKQNLLSISPAHRS*GGRRWK Trigger: CTTCCATCTTCTTCCACCTCATGACCTGTGTGCTGG...AGAGATGGAAAGCAGATTTTGCTTCATCCAGGAAGATGAAGCCAGAAAGTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR TCA 90 bp | AAATCTGCTTTCCATCTCTTGATTCTTGGTGTCCAGGTGGCTAGCTGCTGTGGGAAGTGGCTACCACAATaGAGTGGAAATACTTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: KSAFHLLILGVQVASCCGKWLPQ*SGNTFL Trigger: CAAGAAAGTATTTCCACTTCATTGTGGTAGCCACTT...CCCACAGCAGCTAGCCACCTGGACACCAAGAATCAAGAGATGGAAAGCAGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR TCA 90 bp | AACAACTTTCTGGCTTCATCTTCCTGGATGAAGCAAAATCTGCTTTCCATCTCTGAAGGGATACAGTGCTaGTGGACCCCAAAATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NNFLASSSWMKQNLLSISEGIQC*WTPKSR Trigger: CCTGGATTTTGGGGTCCATCAGCACTGTATCCCTTC...AGAGATGGAAAGCAGATTTTGCTTCATCCAGGAAGATGAAGCCAGAAAGTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CCA 90 bp | GGCTTCATCTTCCTGGATGAAGCAAAATCTGCTTTCCATCTCTTGATTCTTGGTCAGCCAAACCAGAGATaGCACAAGTATTGGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GFIFLDEAKSAFHLLILGQPNQR*HKYWWA Trigger: TGCCCACCAATACTTGTGCCATCTCTGGTTTGGCTG...ACCAAGAATCAAGAGATGGAAAGCAGATTTTGCTTCATCCAGGAAGATGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR GCA 90 bp | AACAACTTTCTGGCTTCATCTTCCTGGATGAAGCAAAATCTGCTTTCCATCTCTAGGCAAGGAGGTAGATaGGAGTTTCAGTGTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: NNFLASSSWMKQNLLSISRQGGR*EFQCRR Trigger: TCTTCTACACTGAAACTCGCATCTACCTCCTTGCCT...AGAGATGGAAAGCAGATTTTGCTTCATCCAGGAAGATGAAGCCAGAAAGTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CCA 90 bp | CAACTTTCTGGCTTCATCTTCCTGGATGAAGCAAAATCTGCTTTCCATCTCTTGGCTACCACAATGAAGTaGAAATACTTTCTTGTAATG | + |
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Preference number: 4 (lower is better) Translates to: QLSGFIFLDEAKSAFHLLATTMK*KYFLVM Trigger: CATTACAAGAAAGTATTTCCACTTCATTGTGGTAGC...CAAGAGATGGAAAGCAGATTTTGCTTCATCCAGGAAGATGAAGCCAGAAAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS GCA 90 bp | GTCCCACACTGCAGCGTGGATGCTCAACACCACGGCGAACACCACTaGAGCCTCCGCCAGCACCGACCCGCTCAGCGCAGCCCCAGACTC | + |
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Preference number: 5 (lower is better) Translates to: VPHCSVDAQHHGEHH*SLRQHRPAQRSPRL Trigger: GAGTCTGGGGCTGCGCTGAGCGGGTCGGTGCTGGCGGAGGCTGCAGTGGTGTTCGCCGTGGTGTTGAGCATCCACGCTGCAGTGTGGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS GCA 90 bp | GGGCCACCGCGCACCAGGAGTATCGGTCCCACACTGCAGCGTGGATaGTCAACACCACGGCGAACACCACTGCAGCCTCCGCCAGCACCG | + |
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Preference number: 5 (lower is better) Translates to: GPPRTRSIGPTLQRG*STPRRTPLQPPPAP Trigger: CGGTGCTGGCGGAGGCTGCAGTGGTGTTCGCCGTGGTGTTGAGCATCCACGCTGCAGTGTGGGACCGATACTCCTGGTGCGCGGTGGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CCA 90 bp | GCGAGGGCCACCGCGCACCAGGAGTATCGGTCCCACACTGCAGCGTaGATGCTCAACACCACGGCGAACACCACTGCAGCCTCCGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ARATAHQEYRSHTAA*MLNTTANTTAASAS Trigger: GCTGGCGGAGGCTGCAGTGGTGTTCGCCGTGGTGTTGAGCATCCACGCTGCAGTGTGGGACCGATACTCCTGGTGCGCGGTGGCCCTCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS GCA 90 bp | CTGCACCGCGAGGGCCACCGCGCACCAGGAGTATCGGTCCCACACTaGAGCGTGGATGCTCAACACCACGGCGAACACCACTGCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: LHREGHRAPGVSVPH*SVDAQHHGEHHCSL Trigger: GAGGCTGCAGTGGTGTTCGCCGTGGTGTTGAGCATCCACGCTGCAGTGTGGGACCGATACTCCTGGTGCGCGGTGGCCCTCGCGGTGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CCA 90 bp | ACCATGGAGGCCGGCAGTAAGCCGCTGTTCGCGGACATCCGGAACTaGAAAACGGCATTGCCCTGCTGGAGCAGCCGGTCCCACTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: TMEAGSKPLFADIRN*KTALPCWSSRSHLY Trigger: GTACAAGTGGGACCGGCTGCTCCAGCAGGGCAATGCCGTTTTCCAGTTCCGGATGTCCGCGAACAGCGGCTTACTGCCGGCCTCCATGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS GCA 90 bp | GCAGTAAGCCGCTGTTCGCGGACATCCGGAACTGGAAAACGGCATTaGCCTGCTGGAGCAGCCGGTCCCACTTGTACTGGACGTAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: AVSRCSRTSGTGKRH*PAGAAGPTCTGRRR Trigger: CCTTCTACGTCCAGTACAAGTGGGACCGGCTGCTCCAGCAGGGCAATGCCGTTTTCCAGTTCCGGATGTCCGCGAACAGCGGCTTACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS GCA 90 bp | AGAGATGGCACAAGTATTGGTGGGCACCGGGCGAGTAATGCCCAGTaGCAACACGGAGGAGAAGAGGGCCACTGCCATGCCAGTAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RDGTSIGGHRASNAQ*QHGGEEGHCHASSC Trigger: GCAGCTACTGGCATGGCAGTGGCCCTCTTCTCCTCCGTGTTGGCACTGGGCATTACTCGCCCGGTGCCCACCAATACTTGTGCCATCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS TCA 90 bp | TGTAGAAGAGGAACTGAAGAAGCCAAAGCAGGGGGTTCCTACGAATaGGCCAGTGCAGCCAGGGCAGAACCACACCAAGGCCCAGCACAC | + |
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Preference number: 5 (lower is better) Translates to: CRRGTEEAKAGGSYE*ASAARAEPHQGPAH Trigger: GTGTGCTGGGCCTTGGTGTGGTTCTGCCCTGGCTGCACTGGCTCATTCGTAGGAACCCCCTGCTTTGGCTTCTTCAGTTCCTCTTCTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CCA 90 bp | GCAACCACAATGCCGAAGCGCTCGAAGTATGGGTTCCCTGCAGTCTaGCAGCGCTCCTTCATGACTAGCCCAAGCAAAGGCATGACCATG | + |
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Preference number: 5 (lower is better) Translates to: ATTMPKRSKYGFPAV*QRSFMTSPSKGMTM Trigger: CATGGTCATGCCTTTGCTTGGGCTAGTCATGAAGGAGCGCTGCCAGACTGCAGGGAACCCATACTTCGAGCGCTTCGGCATTGTGGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CCA 90 bp | AGCCAGGGCAGAACCACACCAAGGCCCAGCACACAGGTCATGAGGTaGAAGAAGATGGAAGAGGCCCAGGTGCCTGAATCCATGAAGACA | + |
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Preference number: 5 (lower is better) Translates to: SQGRTTPRPSTQVMR*KKMEEAQVPESMKT Trigger: TGTCTTCATGGATTCAGGCACCTGGGCCTCTTCCATCTTCTTCCACCTCATGACCTGTGTGCTGGGCCTTGGTGTGGTTCTGCCCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS TCA 90 bp | GACCCAAGGGCTTTATTCGGAAATAGCGCACATACTCCAGGAAGATaGAGACTGCCAGGCACACAGTGGCGGCCACATACAGCAGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: DPRALFGNSAHTPGR*RLPGTQWRPHTAVA Trigger: GGCCACTGCTGTATGTGGCCGCCACTGTGTGCCTGGCAGTCTTCATCTTCCTGGAGTATGTGCGCTATTTCCGAATAAAGCCCTTGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CCA 90 bp | TCCACTGGGTCCCCCTGGCTTTCAGTCAGAGAGCGCTTGATGAGTTaGTTAAGGACGAAGCTAATGCCACCCAATACCAGCAGTGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: STGSPWLSVRERLMS*LRTKLMPPNTSSAS Trigger: GGAGGCACTGCTGGTATTGGGTGGCATTAGCTTCGTCCTTAACCAACTCATCAAGCGCTCTCTGACTGAAAGCCAGGGGGACCCAGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS GCA 90 bp | GGGCTTTATTCGGAAATAGCGCACATACTCCAGGAAGATGAAGACTaGCAGGCACACAGTGGCGGCCACATACAGCAGTGGCCGGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: GLYSEIAHILQEDED*QAHSGGHIQQWPVK Trigger: TTTGACCGGCCACTGCTGTATGTGGCCGCCACTGTGTGCCTGGCAGTCTTCATCTTCCTGGAGTATGTGCGCTATTTCCGAATAAAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CAA 90 bp | TTCCATCTCTTGATTCTTGGTGTCCAGGTGGCTAGCTGCTGTGGGGACCATTCATCAGTCAGAGAGCGCTaGATGAGTTGGTTAAGGACG | + |
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Preference number: 5 (lower is better) Translates to: FHLLILGVQVASCCGDHSSVRER*MSWLRT Trigger: CGTCCTTAACCAACTCATCAAGCGCTCTCTGACTGA...TGAATGGTCCCCACAGCAGCTAGCCACCTGGACACCAAGAATCAAGAGATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CAA 90 bp | AACAACTTTCTGGCTTCATCTTCCTGGATGAAGCAAAATCTGCTTTCCATCTCTGGCGCCCTGTGCTTCTaGGACTCAGAAGACGACCGC | + |
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Preference number: 5 (lower is better) Translates to: NNFLASSSWMKQNLLSISGALCF*DSEDDR Trigger: GCGGTCGTCTTCTGAGTCCAAGAAGCACAGGGCGCC...AGAGATGGAAAGCAGATTTTGCTTCATCCAGGAAGATGAAGCCAGAAAGTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS-3UTR CAA 90 bp | CTAGCTGCTGTGGGGACCATTCATTCTATTTCCCTGTTTCCCCATCACAGCTGCAGAGCGCTTGATGAGTaGGTTAAGGACGAAGCTAAT | + |
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Preference number: 5 (lower is better) Translates to: LAAVGTIHSISLFPHHSCRALDE*VKDEAN Trigger: ATTAGCTTCGTCCTTAACCAACTCATCAAGCGCTCT...GCAGCTGTGATGGGGAAACAGGGAAATAGAATGAATGGTCCCCACAGCAGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS GCA 90 bp | ACCACAATGAAGTGGAAATACTTTCTTGTAATGGTAGGCGCCCTGTaGTTCTTGGACTCAGAAGACGACCGCTTAGCATTCTGGTACAGC | + |
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Preference number: 5 (lower is better) Translates to: TTMKWKYFLVMVGAL*FLDSEDDRLAFWYS Trigger: GCTGTACCAGAATGCTAAGCGGTCGTCTTCTGAGTCCAAGAAGCACAGGGCGCCTACCATTACAAGAAAGTATTTCCACTTCATTGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS GCA 72 bp | TGCAGCGTGGATGCTCAACACCACGGCGAACACCACTaGAGCCTCCGCCAGCACCGACCCGCTCAGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CSVDAQHHGEHH*SLRQHRPAQRS Trigger: GCTGCGCTGAGCGGGTCGGTGCTGGCGGAGGCTGCAGTGGTGTTCGCCGTGGTGTTGAGCATCCACGCTGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS GCA 72 bp | GAGGGCCACCGCGCACCAGGAGTATCGGTCCCACACTaGAGCGTGGATGCTCAACACCACGGCGAACACCAC | + |
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Preference number: 6 (lower is better) Translates to: EGHRAPGVSVPH*SVDAQHHGEHH Trigger: GTGGTGTTCGCCGTGGTGTTGAGCATCCACGCTGCAGTGTGGGACCGATACTCCTGGTGCGCGGTGGCCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CCA 72 bp | GCCGGCAGTAAGCCGCTGTTCGCGGACATCCGGAACTaGAAAACGGCATTGCCCTGCTGGAGCAGCCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: AGSKPLFADIRN*KTALPCWSSRS Trigger: GGACCGGCTGCTCCAGCAGGGCAATGCCGTTTTCCAGTTCCGGATGTCCGCGAACAGCGGCTTACTGCCGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS GCA 72 bp | CGCACCAGGAGTATCGGTCCCACACTGCAGCGTGGATaGTCAACACCACGGCGAACACCACTGCAGCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: RTRSIGPTLQRG*STPRRTPLQPP Trigger: CGGAGGCTGCAGTGGTGTTCGCCGTGGTGTTGAGCATCCACGCTGCAGTGTGGGACCGATACTCCTGGTGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CCA 72 bp | ACCGCGCACCAGGAGTATCGGTCCCACACTGCAGCGTaGATGCTCAACACCACGGCGAACACCACTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TAHQEYRSHTAA*MLNTTANTTAA Trigger: GGCTGCAGTGGTGTTCGCCGTGGTGTTGAGCATCCACGCTGCAGTGTGGGACCGATACTCCTGGTGCGCGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS GCA 72 bp | ACAAGTATTGGTGGGCACCGGGCGAGTAATGCCCAGTaGCAACACGGAGGAGAAGAGGGCCACTGCCATGCC | + |
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Preference number: 6 (lower is better) Translates to: TSIGGHRASNAQ*QHGGEEGHCHA Trigger: GGCATGGCAGTGGCCCTCTTCTCCTCCGTGTTGGCACTGGGCATTACTCGCCCGGTGCCCACCAATACTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CAA 72 bp | CCACAGCCAAGACCCCAGCATAGGGGACCAGGGCTCTaGCTCCTTCCAGGCTGTCCTTCTGTGTACAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: PQPRPQHRGPGL*LLPGCPSVYRV Trigger: GACCCTGTACACAGAAGGACAGCCTGGAAGGAGCAAGAGCCCTGGTCCCCTATGCTGGGGTCTTGGCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS GCA 72 bp | CACAGCCAAGACCCCAGCATAGGGGACCAGGGCTCTTaGTCCTTCCAGGCTGTCCTTCTGTGTACAGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: HSQDPSIGDQGS*SFQAVLLCTGS Trigger: AGACCCTGTACACAGAAGGACAGCCTGGAAGGAGCAAGAGCCCTGGTCCCCTATGCTGGGGTCTTGGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS TCA 72 bp | GGAACTGAAGAAGCCAAAGCAGGGGGTTCCTACGAATaGGCCAGTGCAGCCAGGGCAGAACCACACCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GTEEAKAGGSYE*ASAARAEPHQG Trigger: GCCTTGGTGTGGTTCTGCCCTGGCTGCACTGGCTCATTCGTAGGAACCCCCTGCTTTGGCTTCTTCAGTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CCA 72 bp | TGCTTCTTGGACTCAGAAGACGACCGCTTAGCATTCTaGTACAGCACCACCAGGCAGGCCACAGAGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CFLDSEDDRLAF*YSTTRQATEAS Trigger: GCTGGCCTCTGTGGCCTGCCTGGTGGTGCTGTACCAGAATGCTAAGCGGTCGTCTTCTGAGTCCAAGAAGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CCA 72 bp | CAGGCCAGCGGATCTCTCCCATGGTGCTGCCAAATATaGAGGCCACAGTATCACCCACACCCACAGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: QASGSLPWCCQI*RPQYHPHPQPR Trigger: TCTTGGCTGTGGGTGTGGGTGATACTGTGGCCTCCATATTTGGCAGCACCATGGGAGAGATCCGCTGGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CCA 72 bp | AGTAGCTGCAACCACAATGCCGAAGCGCTCGAAGTATaGGTTCCCTGCAGTCTGGCAGCGCTCCTTCATGAC | + |
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Preference number: 6 (lower is better) Translates to: SSCNHNAEALEV*VPCSLAALLHD Trigger: GTCATGAAGGAGCGCTGCCAGACTGCAGGGAACCCATACTTCGAGCGCTTCGGCATTGTGGTTGCAGCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CAA 90 bp | GTCCACTGGGTCCCCCTGGCTTTCAGTCAGAGAGCGCTTGATGAGTaGGTTAAGGACGAAGCTAATGCCACCCAATACCAGCAGTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: VHWVPLAFSQRALDE*VKDEANATQYQQCL Trigger: GAGGCACTGCTGGTATTGGGTGGCATTAGCTTCGTCCTTAACCAACTCATCAAGCGCTCTCTGACTGAAAGCCAGGGGGACCCAGTGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS GCA 72 bp | TCGGAAATAGCGCACATACTCCAGGAAGATGAAGACTaGCAGGCACACAGTGGCGGCCACATACAGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SEIAHILQEDED*QAHSGGHIQQW Trigger: CCACTGCTGTATGTGGCCGCCACTGTGTGCCTGGCAGTCTTCATCTTCCTGGAGTATGTGCGCTATTTCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CAA 72 bp | TCCACTGGGTCCCCCTGGCTTTCAGTCAGAGAGCGCTaGATGAGTTGGTTAAGGACGAAGCTAATGCCACCC | + |
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Preference number: 6 (lower is better) Translates to: STGSPWLSVRER*MSWLRTKLMPP Trigger: GGGTGGCATTAGCTTCGTCCTTAACCAACTCATCAAGCGCTCTCTGACTGAAAGCCAGGGGGACCCAGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CAA 90 bp | AGGAAGAAGTCCACTGGGTCCCCCTGGCTTTCAGTCAGAGAGCGCTaGATGAGTTGGTTAAGGACGAAGCTAATGCCACCCAATACCAGC | + |
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Preference number: 6 (lower is better) Translates to: RKKSTGSPWLSVRER*MSWLRTKLMPPNTS Trigger: GCTGGTATTGGGTGGCATTAGCTTCGTCCTTAACCAACTCATCAAGCGCTCTCTGACTGAAAGCCAGGGGGACCCAGTGGACTTCTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CAA 72 bp | GTCCCCCTGGCTTTCAGTCAGAGAGCGCTTGATGAGTaGGTTAAGGACGAAGCTAATGCCACCCAATACCAG | + |
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Preference number: 6 (lower is better) Translates to: VPLAFSQRALDE*VKDEANATQYQ Trigger: CTGGTATTGGGTGGCATTAGCTTCGTCCTTAACCAACTCATCAAGCGCTCTCTGACTGAAAGCCAGGGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CAA 90 bp | ATGAAGTGGAAATACTTTCTTGTAATGGTAGGCGCCCTGTGCTTCTaGGACTCAGAAGACGACCGCTTAGCATTCTGGTACAGCACCACC | + |
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Preference number: 6 (lower is better) Translates to: MKWKYFLVMVGALCF*DSEDDRLAFWYSTT Trigger: GGTGGTGCTGTACCAGAATGCTAAGCGGTCGTCTTCTGAGTCCAAGAAGCACAGGGCGCCTACCATTACAAGAAAGTATTTCCACTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS GCA 72 bp | AAGTGGAAATACTTTCTTGTAATGGTAGGCGCCCTGTaGTTCTTGGACTCAGAAGACGACCGCTTAGCATTC | + |
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Preference number: 6 (lower is better) Translates to: KWKYFLVMVGAL*FLDSEDDRLAF Trigger: GAATGCTAAGCGGTCGTCTTCTGAGTCCAAGAAGCACAGGGCGCCTACCATTACAAGAAAGTATTTCCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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| CDS CAA 72 bp | AAATACTTTCTTGTAATGGTAGGCGCCCTGTGCTTCTaGGACTCAGAAGACGACCGCTTAGCATTCTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: KYFLVMVGALCF*DSEDDRLAFWY Trigger: GTACCAGAATGCTAAGCGGTCGTCTTCTGAGTCCAAGAAGCACAGGGCGCCTACCATTACAAGAAAGTATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100219.5 |
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