Pregenerated sensors for DOK6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073514Ensembl transcript IDs: ENSMUST00000097495.5
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTACTGCAATTGGTCTTCCAGGAAGCATGGGACGAAATGACCCCATaGCAGGTCCAAGACAGACTGTCTTGCTGGTCAGTGGTGGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: VLQLVFQEAWDEMTP*QVQDRLSCWSVVAS Trigger: TGAGGCCACCACTGACCAGCAAGACAGTCTGTCTTGGACCTGCCATGGGGTCATTTCGTCCCATGCTTCCTGGAAGACCAATTGCAGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR GCA 90 bp | AAGCTATTTCTCATTTCCCACCACTTCCTGCTGAGAGATGGGTGGTaGCAGGGAACATTCACGGAGAGCAGGAGAAAAACCTTCCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: KLFLISHHFLLRDGW*QGTFTESRRKTFPA Trigger: AGCTGGGAAGGTTTTTCTCCTGCTCTCCGTGAATGTTCCCTGGCACCACCCATCTCTCAGCAGGAAGTGGTGGGAAATGAGAAATAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR TCA 90 bp | GTTAAATTGTACTGCAATTGGTCTTCCAGGAAGCATGGGACGAAATaGCCCCATGGCAGGTCCAAGACAGACTGTCTTGCTGGTCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: VKLYCNWSSRKHGTK*PHGRSKTDCLAGQW Trigger: CCACTGACCAGCAAGACAGTCTGTCTTGGACCTGCCATGGGGTCATTTCGTCCCATGCTTCCTGGAAGACCAATTGCAGTACAATTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CCA 90 bp | CATAAGCTATTTCTCATTTCCCACCACTTCCTGCTGAGAGATGGGTaGTGCCAGGGAACATTCACGGAGAGCAGGAGAAAAACCTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: HKLFLISHHFLLRDG*CQGTFTESRRKTFP Trigger: TGGGAAGGTTTTTCTCCTGCTCTCCGTGAATGTTCCCTGGCACCACCCATCTCTCAGCAGGAAGTGGTGGGAAATGAGAAATAGCTTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CCA 90 bp | TTTGTCATCTGCAGTGAAGGTGACACTGGTCTTTGTGCCCAGGAGTaGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTAAA | + |
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Preference number: 1 (lower is better) Translates to: FVICSEGDTGLCAQE*RFVGVVHVLPLTAK Trigger: TTTAGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACAAAGACCAGTGTCACCTTCACTGCAGATGACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR GCA 90 bp | TGGCTGTATCCTCTGTCCTCAGTAGGACCCAGTCATTTGCTCTTCTaGTGTGTCAGCAAAATCCACAGTGCAGAGTTTGGGCAATTTTCT | + |
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Preference number: 1 (lower is better) Translates to: WLYPLSSVGPSHLLF*CVSKIHSAEFGQFS Trigger: AGAAAATTGCCCAAACTCTGCACTGTGGATTTTGCTGACACAGCAGAAGAGCAAATGACTGGGTCCTACTGAGGACAGAGGATACAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR GCA 90 bp | GATGGCCACACTAGGAACCGTGCTAGAACAATCTCAGCTCAGAGTTaGTCTGGTGTATTTACTAATGGCATTTCTACAGTGGATGCCATG | + |
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Preference number: 1 (lower is better) Translates to: DGHTRNRARTISAQS*SGVFTNGISTVDAM Trigger: CATGGCATCCACTGTAGAAATGCCATTAGTAAATACACCAGAGCAACTCTGAGCTGAGATTGTTCTAGCACGGTTCCTAGTGTGGCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR TCA 90 bp | GTAACCATCTTCATAGCTCTGTATAAATCTGAGTGGAAGCCCAACTaGGTTATACTCAGAAGGAGCGTAAAGATGTCTTTGGTGCATAGT | + |
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Preference number: 1 (lower is better) Translates to: VTIFIALYKSEWKPN*VILRRSVKMSLVHS Trigger: ACTATGCACCAAAGACATCTTTACGCTCCTTCTGAGTATAACTCAGTTGGGCTTCCACTCAGATTTATACAGAGCTATGAAGATGGTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR GCA 90 bp | ATACAATATGACAACCAACATACAGGACAGCTAGGCGTGTTATCCTaGTTCCAAAACACTTTCCTCTTGAGTTTCCACACATACTCCTTA | + |
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Preference number: 1 (lower is better) Translates to: IQYDNQHTGQLGVLS*FQNTFLLSFHTYSL Trigger: TAAGGAGTATGTGTGGAAACTCAAGAGGAAAGTGTTTTGGAAGCAGGATAACACGCCTAGCTGTCCTGTATGTTGGTTGTCATATTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR TCA 90 bp | TCTTCTCTGAGAATAACTGTAGAGATATTTCAAGGTTCACACTCTTaGGTAAGAAAGAATGGGCTCATGTCCACACACAAAAAGGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: SSLRITVEIFQGSHS*VRKNGLMSTHKKAG Trigger: ACCTGCCTTTTTGTGTGTGGACATGAGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATTCTCAGAGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR GCA 90 bp | CATACCTATCTGAGTGATTTGGGGAGTGTAGGTAGTTGCAGTAAGTaGACATTTATCAAGGAAGGATGCATAAACACTTTACTCAGTAGT | + |
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Preference number: 1 (lower is better) Translates to: HTYLSDLGSVGSCSK*TFIKEGCINTLLSS Trigger: ACTACTGAGTAAAGTGTTTATGCATCCTTCCTTGATAAATGTGCACTTACTGCAACTACCTACACTCCCCAAATCACTCAGATAGGTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CCA 90 bp | TTTGGAGTTGGATATTACACCAATTCCTCAAGTACTTCTGATGGATaGCCAAGGGAAGAAACAATCAATAACAAGGCAACACTAACTAGA | + |
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Preference number: 1 (lower is better) Translates to: FGVGYYTNSSSTSDG*PREETINNKATLTR Trigger: TCTAGTTAGTGTTGCCTTGTTATTGATTGTTTCTTCCCTTGGCCATCCATCAGAAGTACTTGAGGAATTGGTGTAATATCCAACTCCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR TCA 90 bp | GAAAGAGGCTCAGCAAATGTTTATCTAGACAGATCTACATTAAAATaGCAAAGACTGCTGTCATTGAGAAGAATTGTCAAACGGAAAATG | + |
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Preference number: 1 (lower is better) Translates to: ERGSANVYLDRSTLK*QRLLSLRRIVKRKM Trigger: CATTTTCCGTTTGACAATTCTTCTCAATGACAGCAGTCTTTGTCATTTTAATGTAGATCTGTCTAGATAAACATTTGCTGAGCCTCTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR TCA 90 bp | CTCACATACCCTGTGGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTTCTGAGCCCACCACTTCCTGCTaGGAGATGGGTGGTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LTYPVVCEMCFSQDGSSEPTTSC*EMGGAR Trigger: CCTGGCACCACCCATCTCTCAGCAGGAAGTGGTGGG...CTCAGAAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTCAAGACAGACTGTCTTaGTGGTCAGTGGTGGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: CAQEWRFVGVVHVLPLTAQDRLS*WSVVAS Trigger: TGAGGCCACCACTGACCAGCAAGACAGTCTGTCTTG...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CAA 90 bp | TTCCAGGAATGGCTGTATCCTCTGTCCTCAGTAGGACCCAGTCATTaGCTCTTCTGCTGTGTCAGCAAAATCCACAGTGCAGAGTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: FQEWLYPLSSVGPSH*LFCCVSKIHSAEFG Trigger: CCCAAACTCTGCACTGTGGATTTTGCTGACACAGCAGAAGAGCAAATGACTGGGTCCTACTGAGGACAGAGGATACAGCCATTCCTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CAA 90 bp | GGGAACATTCACGGAGAGCAGGAGAAAAACCTTCCCAGCTGTTTATaGCCTCTGAACAAACTACAAAGCCCTCAGGTTTCAGGTTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: GNIHGEQEKNLPSCL*PLNKLQSPQVSGSP Trigger: GGGGGAACCTGAAACCTGAGGGCTTTGTAGTTTGTTCAGAGGCAATAAACAGCTGGGAAGGTTTTTCTCCTGCTCTCCGTGAATGTTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTATCTTTCACTCTGTTTaGCCTTTCCATTGCTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: CAQEWRFVGVVHVLPLTAIFHSV*PFHCCH Trigger: GTGGCAGCAATGGAAAGGTCAAACAGAGTGAAAGAT...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTAAATCTCAGGACCACTaGATGTATACTGCCCACTTA | + |
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Preference number: 2 (lower is better) Translates to: CAQEWRFVGVVHVLPLTAKSQDH*MYTAHL Trigger: TAAGTGGGCAGTATACATTCAGTGGTCCTGAGATTT...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR CCA 90 bp | CTCACATACCCTGTGGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTTCTGAGCTTCCTGCTGAGAGATaGGTGGTGCCAGGGAACATT | + |
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Preference number: 2 (lower is better) Translates to: LTYPVVCEMCFSQDGSSELPAER*VVPGNI Trigger: AATGTTCCCTGGCACCACCCATCTCTCAGCAGGAAG...CTCAGAAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTACTTCAAACAGTGGTTaGTTTTCAACTTCTGCACCC | + |
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Preference number: 2 (lower is better) Translates to: CAQEWRFVGVVHVLPLTATSNSG*FSTSAP Trigger: GGGTGCAGAAGTTGAAAACCAACCACTGTTTGAAGT...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTAGTAATTCACTGAAATaGGTTGTCAGTCTGCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: CAQEWRFVGVVHVLPLTASNSLK*VVSLLF Trigger: GAAGAGCAGACTGACAACTCATTTCAGTGAATTACT...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTATTAAATTCAAATTGTaGCAGTGGCCAAAAGCTACT | + |
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Preference number: 2 (lower is better) Translates to: CAQEWRFVGVVHVLPLTAIKFKL*QWPKAT Trigger: AGTAGCTTTTGGCCACTGCCACAATTTGAATTTAAT...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR TCA 90 bp | CTCACATACCCTGTGGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTTCTGAGTCTGTAGAGCTCACTTaGCTTCTTTCTGCCAAAACT | + |
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Preference number: 2 (lower is better) Translates to: LTYPVVCEMCFSQDGSSESVELT*LLSAKT Trigger: AGTTTTGGCAGAAAGAAGTCAAGTGAGCTCTACAGA...CTCAGAAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR TCA 90 bp | CTCACATACCCTGTGGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTTCTGAGGTCTCTCCCTCAAAATaGGAAAGTATAGAGGCATCT | + |
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Preference number: 2 (lower is better) Translates to: LTYPVVCEMCFSQDGSSEVSPSK*ESIEAS Trigger: AGATGCCTCTATACTTTCTCATTTTGAGGGAGAGAC...CTCAGAAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR CCA 90 bp | CTCACATACCCTGTGGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTTCTGAGAAATTGTACTGCAATTaGTCTTCCAGGAAGCATGGG | + |
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Preference number: 2 (lower is better) Translates to: LTYPVVCEMCFSQDGSSEKLYCN*SSRKHG Trigger: CCCATGCTTCCTGGAAGACCAATTGCAGTACAATTT...CTCAGAAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR CCA 90 bp | CTCACATACCCTGTGGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTTCTGAGAGTACTTCTGATGGATaGCCAAGGGAAGAAACAATC | + |
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Preference number: 2 (lower is better) Translates to: LTYPVVCEMCFSQDGSSESTSDG*PREETI Trigger: GATTGTTTCTTCCCTTGGCCATCCATCAGAAGTACT...CTCAGAAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CAA 90 bp | CCAGGGAAACATAAAAGGAATCTTTCACTCTGTTTGACCTTTCCATaGCTGCCACGGTTTAATCCCATCTTAAAAATGTGTCTGGCGTCT | + |
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Preference number: 2 (lower is better) Translates to: PGKHKRNLSLCLTFP*LPRFNPILKMCLAS Trigger: AGACGCCAGACACATTTTTAAGATGGGATTAAACCGTGGCAGCAATGGAAAGGTCAAACAGAGTGAAAGATTCCTTTTATGTTTCCCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR GCA 90 bp | CTCACATACCCTGTGGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTTCTGAGATCAACGGAATGAGTTaGTCACAGAAAAGCTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: LTYPVVCEMCFSQDGSSEINGMS*SQKSFL Trigger: CAAAAAGCTTTTCTGTGAGCAACTCATTCCGTTGAT...CTCAGAAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR CCA 90 bp | AATAACTGTAGAGATATTTCAAGGTTCACACTCTTGAGTAAGAAAGAATGGGCTGTCTTCCAGGAAGCATaGGACGAAATGACCCCATGG | + |
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Preference number: 2 (lower is better) Translates to: NNCRDISRFTLLSKKEWAVFQEA*DEMTPW Trigger: CCATGGGGTCATTTCGTCCCATGCTTCCTGGAAGAC...AGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCAAAACTGAAAAAGTCACAGGGCTTGCAGTAGGTCATCATATGTCTAAAAGGCTCAAACTGGAGTaGAAAAATTTCCCAGTACCA | + |
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Preference number: 2 (lower is better) Translates to: SAKTEKVTGLAVGHHMSKRLKLE*KNFPVP Trigger: TGGTACTGGGAAATTTTTCCACTCCAGTTTGAGCCT...TTTAGACATATGATGACCTACTGCAAGCCCTGTGACTTTTTCAGTTTTGGCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CAA 90 bp | TTCTTCTCTGAGAATAACTGTAGAGATATTTCAAGGTTCACACTCTaGAGTAAGAAAGAATGGGCTCATGTCCACACACAAAAAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: FFSENNCRDISRFTL*SKKEWAHVHTQKGR Trigger: CCTGCCTTTTTGTGTGTGGACATGAGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATTCTCAGAGAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR TCA 90 bp | CATTTGTTCTCCTCTCTTGACTACATGATGGCTGAGTTTACTTTAAGATCAGTTTCTTTCTGCCAAAACTaGAAAAGTCACAGGGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: HLFSSLDYMMAEFTLRSVSFCQN*KSHRAC Trigger: GCAAGCCCTGTGACTTTTTCAGTTTTGGCAGAAAGA...AACTGATCTTAAAGTAAACTCAGCCATCATGTAGTCAAGAGAGGAGAACAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR TCA 90 bp | TTAGCCAGACTTTTCCTCTTTGAGTGGAATTTCCTATTTTCCCTCCAACTTGGTAAAACACTTTCCTCTTaGGTTTCCACACATACTCCT | + |
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Preference number: 2 (lower is better) Translates to: LARLFLFEWNFLFSLQLGKTLSS*VSTHTP Trigger: AGGAGTATGTGTGGAAACTCAAGAGGAAAGTGTTTT...ACCAAGTTGGAGGGAAAATAGGAAATTCCACTCAAAGAGGAAAAGTCTGGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR GCA 90 bp | AATAACTGTAGAGATATTTCAAGGTTCACACTCTTGAGTAAGAAAGAATGGGCTGAATCCTACTGGACTTaGTATCTGTGCTTCTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: NNCRDISRFTLLSKKEWAESYWT*YLCFWH Trigger: GTGCCAGAAGCACAGATAGCAAGTCCAGTAGGATTC...AGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR CCA 90 bp | AATAACTGTAGAGATATTTCAAGGTTCACACTCTTGAGTAAGAAAGAATGGGCTCAGCCAGGCTCAAACTaGAGTGGAAAAATTTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: NNCRDISRFTLLSKKEWAQPGSN*SGKISQ Trigger: CTGGGAAATTTTTCCACTCCAGTTTGAGCCTGGCTG...AGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR CCA 90 bp | TTAGCCAGACTTTTCCTCTTTGAGTGGAATTTCCTATTTTCCCTCCAACTTGGTCTTTCTCCAACATTTTaGAGTCTCCATTTGGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: LARLFLFEWNFLFSLQLGLSPTF*SLHLEL Trigger: CAACTCCAAATGGAGACTCCAAAATGTTGGAGAAAG...ACCAAGTTGGAGGGAAAATAGGAAATTCCACTCAAAGAGGAAAAGTCTGGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR TCA 90 bp | CATTTGTTCTCCTCTCTTGACTACATGATGGCTGAGTTTACTTTAAGATCAGTTAAAGGACTTAACCACTaGATCAAGGAAGCAGAACTC | + |
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Preference number: 2 (lower is better) Translates to: HLFSSLDYMMAEFTLRSVKGLNH*IKEAEL Trigger: GAGTTCTGCTTCCTTGATTCAGTGGTTAAGTCCTTT...AACTGATCTTAAAGTAAACTCAGCCATCATGTAGTCAAGAGAGGAGAACAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR TCA 90 bp | TTTATGAGGCTACGGGAGACTGCCACAAGTATCTTCTCATCTTTGGTTTATATAGTTCTGATTTCACAGTaGATGCCAAGCCTCAATAAT | + |
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Preference number: 2 (lower is better) Translates to: FMRLRETATSIFSSLVYIVLISQ*MPSLNN Trigger: ATTATTGAGGCTTGGCATTCACTGTGAAATCAGAAC...TATATAAACCAAAGATGAGAAGATACTTGTGGCAGTCTCCCGTAGCCTCATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR TCA 90 bp | AATAACTGTAGAGATATTTCAAGGTTCACACTCTTGAGTAAGAAAGAATGGGCTAAGCCAAGTAAGTTCTaGTTTCACAGTGAATGCCAA | + |
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Preference number: 2 (lower is better) Translates to: NNCRDISRFTLLSKKEWAKPSKF*FHSECQ Trigger: TTGGCATTCACTGTGAAATCAGAACTTACTTGGCTT...AGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CAA 90 bp | TTAAGATCAGTTTTATGTCTTTCTCCAACATTTTGGAGTCTCCATTaGGAGTTGGATATTACACCAATTCCTCAAGTACTTCTGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: LRSVLCLSPTFWSLH*ELDITPIPQVLLMD Trigger: ATCCATCAGAAGTACTTGAGGAATTGGTGTAATATCCAACTCCAAATGGAGACTCCAAAATGTTGGAGAAAGACATAAAACTGATCTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CAA 90 bp | GGTTTTATGAGGCTACGGGAGACTGCCACAAGTATCTTCTCATCTTaGGTTTATATAGGTTCATCTGTTTGTCTCTTTTATTACAATAAT | + |
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Preference number: 2 (lower is better) Translates to: GFMRLRETATSIFSS*VYIGSSVCLFYYNN Trigger: ATTATTGTAATAAAAGAGACAAACAGATGAACCTATATAAACCAAAGATGAGAAGATACTTGTGGCAGTCTCCCGTAGCCTCATAAAACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR GCA 90 bp | CATTTGTTCTCCTCTCTTGACTACATGATGGCTGAGTTTACTTTAAGATCAGTTAATGTTAAATTGTACTaGAATTGGTCTTCCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: HLFSSLDYMMAEFTLRSVNVKLY*NWSSRK Trigger: CTTCCTGGAAGACCAATTGCAGTACAATTTAACATT...AACTGATCTTAAAGTAAACTCAGCCATCATGTAGTCAAGAGAGGAGAACAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR GCA 90 bp | AATAACTGTAGAGATATTTCAAGGTTCACACTCTTGAGTAAGAAAGAATGGGCTATCTCAGCTCAGAGTTaGTCTGGTGTATTTACTAAT | + |
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Preference number: 2 (lower is better) Translates to: NNCRDISRFTLLSKKEWAISAQS*SGVFTN Trigger: ATTAGTAAATACACCAGAGCAACTCTGAGCTGAGAT...AGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR CCA 90 bp | AATAACTGTAGAGATATTTCAAGGTTCACACTCTTGAGTAAGAAAGAATGGGCTATGGCATTTCTACAGTaGATGCCATGTGTTAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: NNCRDISRFTLLSKKEWAMAFLQ*MPCVKE Trigger: TTCTTTAACACATGGCATCCACTGTAGAAATGCCAT...AGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR-3UTR CCA 90 bp | AATAACTGTAGAGATATTTCAAGGTTCACACTCTTGAGTAAGAAAGAATGGGCTAGAAATTCTAAATCTTaGAAGAGTAGGGTCCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: NNCRDISRFTLLSKKEWARNSKS*KSRVQV Trigger: CACTTGGACCCTACTCTTCCAAGATTTAGAATTTCT...AGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR GCA 90 bp | AATAACTGTAGAGATATTTCAAGGTTCACACTCTTGAGTAAGAAAGAATGGGCTAATTCCAAAAGAAGTTaGCCACAAAAAGCAATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: NNCRDISRFTLLSKKEWANSKRS*PQKAIL Trigger: CAGAATTGCTTTTTGTGGGCAACTTCTTTTGGAATT...AGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR GCA 72 bp | CTCATTTCCCACCACTTCCTGCTGAGAGATGGGTGGTaGCAGGGAACATTCACGGAGAGCAGGAGAAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: LISHHFLLRDGW*QGTFTESRRKT Trigger: GGTTTTTCTCCTGCTCTCCGTGAATGTTCCCTGGCACCACCCATCTCTCAGCAGGAAGTGGTGGGAAATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR CCA 72 bp | TTGGTCTTCCAGGAAGCATGGGACGAAATGACCCCATaGCAGGTCCAAGACAGACTGTCTTGCTGGTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LVFQEAWDEMTP*QVQDRLSCWSV Trigger: CACTGACCAGCAAGACAGTCTGTCTTGGACCTGCCATGGGGTCATTTCGTCCCATGCTTCCTGGAAGACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR CCA 72 bp | GCTATTTCTCATTTCCCACCACTTCCTGCTGAGAGATaGGTGGTGCCAGGGAACATTCACGGAGAGCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: AISHFPPLPAER*VVPGNIHGEQE Trigger: CTCCTGCTCTCCGTGAATGTTCCCTGGCACCACCCATCTCTCAGCAGGAAGTGGTGGGAAATGAGAAATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR CCA 72 bp | TGCAGTGAAGGTGACACTGGTCTTTGTGCCCAGGAGTaGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CSEGDTGLCAQE*RFVGVVHVLPL Trigger: CAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACAAAGACCAGTGTCACCTTCACTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTAGAATCCTACTGGACTaGCTATCTGTGCTTCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CAQEWRFVGVVHVLPLTARILLD*LSVLLA Trigger: TGCCAGAAGCACAGATAGCAAGTCCAGTAGGATTCT...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR TCA 72 bp | TACTGCAATTGGTCTTCCAGGAAGCATGGGACGAAATaGCCCCATGGCAGGTCCAAGACAGACTGTCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: YCNWSSRKHGTK*PHGRSKTDCLA Trigger: AGCAAGACAGTCTGTCTTGGACCTGCCATGGGGTCATTTCGTCCCATGCTTCCTGGAAGACCAATTGCAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR TCA 72 bp | AGAAACTTGTGGTGTCTAAGCAACAGCTCGACTCAGTaGGCCAGCAAGAGGCTCTCTCTGATGGCCACACTA | + |
|
Preference number: 3 (lower is better) Translates to: RNLWCLSNSSTQ*ASKRLSLMATL Trigger: TAGTGTGGCCATCAGAGAGAGCCTCTTGCTGGCTCACTGAGTCGAGCTGTTGCTTAGACACCACAAGTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR TCA 72 bp | GCCATAAGCTATTTCTCATTTCCCACCACTTCCTGCTaGGAGATGGGTGGTGCCAGGGAACATTCACGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: AISYFSFPTTSC*EMGGAREHSRR Trigger: TCTCCGTGAATGTTCCCTGGCACCACCCATCTCTCAGCAGGAAGTGGTGGGAAATGAGAAATAGCTTATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR GCA 72 bp | CCTCTGTCCTCAGTAGGACCCAGTCATTTGCTCTTCTaGTGTGTCAGCAAAATCCACAGTGCAGAGTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PLSSVGPSHLLF*CVSKIHSAEFG Trigger: CCCAAACTCTGCACTGTGGATTTTGCTGACACAGCAGAAGAGCAAATGACTGGGTCCTACTGAGGACAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR CCA 72 bp | TTTCTCATTTCCCACCACTTCCTGCTGAGAGATGGGTaGTGCCAGGGAACATTCACGGAGAGCAGGAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: FLISHHFLLRDG*CQGTFTESRRK Trigger: TTTTCTCCTGCTCTCCGTGAATGTTCCCTGGCACCACCCATCTCTCAGCAGGAAGTGGTGGGAAATGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTAGCGTAAAGATGTCTTaGGTGCATAGTAGTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CAQEWRFVGVVHVLPLTASVKMS*VHSSLS Trigger: GGAGAGACTACTATGCACCAAAGACATCTTTACGCT...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCACATACCCTGTGGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTTCTGAGGTAGGACCCAGTCATTaGCTCTTCTGCTGTGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LTYPVVCEMCFSQDGSSEVGPSH*LFCCVS Trigger: GCTGACACAGCAGAAGAGCAAATGACTGGGTCCTAC...CTCAGAAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTCTTCCCAGCTGTTTATaGCCTCTGAACAAACTACAA | + |
|
Preference number: 3 (lower is better) Translates to: CAQEWRFVGVVHVLPLTALPSCL*PLNKLQ Trigger: TTGTAGTTTGTTCAGAGGCAATAAACAGCTGGGAAG...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTTCACTGTTCTGCATGTaGCCTTCATTCTGTCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: CAQEWRFVGVVHVLPLTASLFCM*PSFCPF Trigger: AAATGGACAGAATGAAGGCAACATGCAGAACAGTGA...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTTCTTTCTCCAACATTTaGGAGTCTCCATTTGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: CAQEWRFVGVVHVLPLTASFSNI*ESPFGV Trigger: AACTCCAAATGGAGACTCCAAAATGTTGGAGAAAGA...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTGCAAACATTTCTATTTaGACCCGAATTAGCCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: CAQEWRFVGVVHVLPLTAANISI*TRISQT Trigger: AGTCTGGCTAATTCGGGTCAAAATAGAAATGTTTGC...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR TCA 72 bp | AGCAGGAGAAAAACCTTCCCAGCTGTTTATTGCCTCTaGACAAACTACAAAGCCCTCAGGTTTCAGGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SRRKTFPAVYCL*TNYKALRFQVP Trigger: GGGAACCTGAAACCTGAGGGCTTTGTAGTTTGTTCAGAGGCAATAAACAGCTGGGAAGGTTTTTCTCCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCACATACCCTGTGGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTTCTGAGGAGACTATGGGCATTTaGAGTGACTTCAAACAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LTYPVVCEMCFSQDGSSEETMGI*SDFKQW Trigger: CCACTGTTTGAAGTCACTCAAAATGCCCATAGTCTC...CTCAGAAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR TCA 72 bp | CTCCCCATCAAGGGAACTTTAACACTACTGACTGTGTaGTCTGGGTCTACAATGCAGTTTGTTTTCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPIKGTLTLLTV*SGSTMQFVFSR Trigger: CCTGGAGAAAACAAACTGCATTGTAGACCCAGATCACACAGTCAGTAGTGTTAAAGTTCCCTTGATGGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR CCA 72 bp | GTGTTAAAGAAACTCAGAGGCATTAACCCTGAAAAGTaGGATTCCAGGAATGGCTGTATCCTCTGTCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VLKKLRGINPEK*DSRNGCILCPQ Trigger: CTGAGGACAGAGGATACAGCCATTCCTGGAATCCCACTTTTCAGGGTTAATGCCTCTGAGTTTCTTTAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | TTACAAGTGAAACATTTTCTCCTTTCATCCCAGCCAAGTAAGTTCAGTATAAGACCAAGACAGACTGTCTaGCTGGTCAGTGGTGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LQVKHFLLSSQPSKFSIRPRQTV*LVSGGL Trigger: GAGGCCACCACTGACCAGCAAGACAGTCTGTCTTGG...TCTTATACTGAACTTACTTGGCTGGGATGAAAGGAGAAAATGTTTCACTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCACATACCCTGTGGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTTCTGAGCTCAGTATGATGAGATaGGTTAAAAGACTAAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LTYPVVCEMCFSQDGSSELSMMR*VKRLRR Trigger: CCTCCTTAGTCTTTTAACCAATCTCATCATACTGAG...CTCAGAAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | CTCACATACCCTGTGGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTTCTGAGGTGAAAGCAGAAGAATaGCACACTGGAACTAATTGT | + |
|
Preference number: 3 (lower is better) Translates to: LTYPVVCEMCFSQDGSSEVKAEE*HTGTNC Trigger: ACAATTAGTTCCAGTGTGCAATTCTTCTGCTTTCAC...CTCAGAAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR GCA 72 bp | ACTAGGAACCGTGCTAGAACAATCTCAGCTCAGAGTTaGTCTGGTGTATTTACTAATGGCATTTCTACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TRNRARTISAQS*SGVFTNGISTV Trigger: CACTGTAGAAATGCCATTAGTAAATACACCAGAGCAACTCTGAGCTGAGATTGTTCTAGCACGGTTCCTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR CCA 72 bp | TGTTGCCTTCATTCTGTCCATTTCTCACATACCCTGTaGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CCLHSVHFSHTL*SVRCVSLKMVL Trigger: AAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAGAAATGGACAGAATGAAGGCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR TCA 72 bp | ATCTGTAGAGCTCACTTGACTTCTTTCTGCCAAAACTaGAAAAGTCACAGGGCTTGCAGTAGGTCATCATAT | + |
|
Preference number: 3 (lower is better) Translates to: ICRAHLTSFCQN*KSHRACSRSSY Trigger: ATATGATGACCTACTGCAAGCCCTGTGACTTTTTCAGTTTTGGCAGAAAGAAGTCAAGTGAGCTCTACAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTATGAGGCTACGGGAGACTGCCACAAGTATCTTCTCATCTTTGGTTTATATATGTGCTTCTGGCACATaGATAAAGCTGAGATGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: FMRLRETATSIFSSLVYICASGT*IKLRCE Trigger: TTCACATCTCAGCTTTATCAATGTGCCAGAAGCACA...TATATAAACCAAAGATGAGAAGATACTTGTGGCAGTCTCCCGTAGCCTCATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTATGAGGCTACGGGAGACTGCCACAAGTATCTTCTCATCTTTGGTTTATATAACTTTATGTGAGTACTaGTCTCCCACCAAAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: FMRLRETATSIFSSLVYITLCEY*SPTKET Trigger: TGTCTCTTTGGTGGGAGACAAGTACTCACATAAAGT...TATATAAACCAAAGATGAGAAGATACTTGTGGCAGTCTCCCGTAGCCTCATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR TCA 72 bp | TTCATAGCTCTGTATAAATCTGAGTGGAAGCCCAACTaGGTTATACTCAGAAGGAGCGTAAAGATGTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FIALYKSEWKPN*VILRRSVKMSL Trigger: CAAAGACATCTTTACGCTCCTTCTGAGTATAACTCAGTTGGGCTTCCACTCAGATTTATACAGAGCTATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR TCA 72 bp | TTACATGCACTGTCAAACAGCATCTTCCCTAATGTATaGAACAATGGCTTCATTCTGAACCAGCAAAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LHALSNSIFPNV*NNGFILNQQKA Trigger: AGCCTTTTGCTGGTTCAGAATGAAGCCATTGTTTCATACATTAGGGAAGATGCTGTTTGACAGTGCATGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR GCA 72 bp | TTATGGTGGAATAGGTTTTATGAGGCTACGGGAGACTaGCACAAGTATCTTCTCATCTTTGGTTTATATAGG | + |
|
Preference number: 3 (lower is better) Translates to: LWWNRFYEATGD*HKYLLIFGLYR Trigger: CCTATATAAACCAAAGATGAGAAGATACTTGTGGCAGTCTCCCGTAGCCTCATAAAACCTATTCCACCATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR CCA 72 bp | GGATATTACACCAATTCCTCAAGTACTTCTGATGGATaGCCAAGGGAAGAAACAATCAATAACAAGGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: GYYTNSSSTSDG*PREETINNKAT Trigger: TGTTGCCTTGTTATTGATTGTTTCTTCCCTTGGCCATCCATCAGAAGTACTTGAGGAATTGGTGTAATATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | CATTTGTTCTCCTCTCTTGACTACATGATGGCTGAGTTTACTTTAAGATCAGTTCAAAACACTTTCCTCTaGAGTTTCCACACATACTCC | + |
|
Preference number: 3 (lower is better) Translates to: HLFSSLDYMMAEFTLRSVQNTFL*SFHTYS Trigger: GGAGTATGTGTGGAAACTCAAGAGGAAAGTGTTTTG...AACTGATCTTAAAGTAAACTCAGCCATCATGTAGTCAAGAGAGGAGAACAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTATGAGGCTACGGGAGACTGCCACAAGTATCTTCTCATCTTTGGTTTATATAAGTCTCCATTTGGAGTaGGATATTACACCAATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FMRLRETATSIFSSLVYISLHLE*DITPIP Trigger: AGGAATTGGTGTAATATCCAACTCCAAATGGAGACT...TATATAAACCAAAGATGAGAAGATACTTGTGGCAGTCTCCCGTAGCCTCATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTATGAGGCTACGGGAGACTGCCACAAGTATCTTCTCATCTTTGGTTTATATATATGATCTGGACTCCTaGATAGATATCTGGATTAGG | + |
|
Preference number: 3 (lower is better) Translates to: FMRLRETATSIFSSLVYIYDLDS*IDIWIR Trigger: CCTAATCCAGATATCTATCAAGGAGTCCAGATCATA...TATATAAACCAAAGATGAGAAGATACTTGTGGCAGTCTCCCGTAGCCTCATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR CCA 72 bp | TTCTTTAAATATGATCTGGACTCCTTGATAGATATCTaGATTAGGCACATGACATCAGGTGAGTCAGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: FFKYDLDSLIDI*IRHMTSGESGI Trigger: TATGCCTGACTCACCTGATGTCATGTGCCTAATCCAGATATCTATCAAGGAGTCCAGATCATATTTAAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR CCA 72 bp | AAGAGTAGGGTCCAAGTGTCATGCTGTCTGTGTCAATaGATTCTTTATCATTTAGCTCAAATTATCCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: KSRVQVSCCLCQ*ILYHLAQIILQ Trigger: CTGTAGGATAATTTGAGCTAAATGATAAAGAATCCATTGACACAGACAGCATGACACTTGGACCCTACTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR TCA 72 bp | AGAATAACTGTAGAGATATTTCAAGGTTCACACTCTTaGGTAAGAAAGAATGGGCTCATGTCCACACACAAA | + |
|
Preference number: 3 (lower is better) Translates to: RITVEIFQGSHS*VRKNGLMSTHK Trigger: TTTGTGTGTGGACATGAGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR GCA 72 bp | AATTCTAAATCTTGGAAGAGTAGGGTCCAAGTGTCATaGTGTCTGTGTCAATGGATTCTTTATCATTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NSKSWKSRVQVS*CLCQWILYHLA Trigger: AGCTAAATGATAAAGAATCCATTGACACAGACAGCATGACACTTGGACCCTACTCTTCCAAGATTTAGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR TCA 72 bp | TTCAAATACTTGATTCTTCTGAGACTATGGGCATTTTaGGTGACTTCAAACAGTGGTTGGTTTTCAACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FKYLILLRLWAF*VTSNSGWFSTS Trigger: AGAAGTTGAAAACCAACCACTGTTTGAAGTCACTCAAAATGCCCATAGTCTCAGAAGAATCAAGTATTTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR GCA 72 bp | GGTAGTTGCAGTAAGTGCACATTTATCAAGGAAGGATaGATAAACACTTTACTCAGTAGTAATTCACTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSCSKCTFIKEG*INTLLSSNSLK Trigger: TTTCAGTGAATTACTACTGAGTAAAGTGTTTATGCATCCTTCCTTGATAAATGTGCACTTACTGCAACTACC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR CCA 72 bp | TTTTATGTCTTTCTCCAACATTTTGGAGTCTCCATTTaGAGTTGGATATTACACCAATTCCTCAAGTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: FYVFLQHFGVSI*SWILHQFLKYF Trigger: GAAGTACTTGAGGAATTGGTGTAATATCCAACTCCAAATGGAGACTCCAAAATGTTGGAGAAAGACATAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR TCA 72 bp | AAATATTTATGTAAAAACATGTATACCTCCAGACTTTaGGAGGAGACTTTCTCATGCACATCAGCCTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KYLCKNMYTSRL*EETFSCTSASF Trigger: AAAAGAGGCTGATGTGCATGAGAAAGTCTCCTCTCAAAGTCTGGAGGTATACATGTTTTTACATAAATATTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| CDS-3UTR TCA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTGGCTGGAGCTATAGCTaGATCCATAGCTGCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: CAQEWRFVGVVHVLPLTAGWSYS*IHSCWT Trigger: GGTCCAGCAGCTATGGATTCAGCTATAGCTCCAGCC...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| CDS-3UTR TCA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTGCCACATCACTAGCTTaGCCTTCGCATTGTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: CAQEWRFVGVVHVLPLTAATSLA*PSHCGY Trigger: ATATCCACAATGCGAAGGTCAAGCTAGTGATGTGGC...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| CDS-3UTR GCA 90 bp | TGTGCCCAGGAGTGGAGATTTGTGGGTGTGGTTCATGTACTGCCTCTGACAGCTAGCTATAGCCAGTGTTaGAGAGTGGACCTTCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: CAQEWRFVGVVHVLPLTASYSQC*RVDLLI Trigger: TATCAGAAGGTCCACTCTGCAACACTGGCTATAGCT...AGCTGTCAGAGGCAGTACATGAACCACACCCACAAATCTCCACTCCTGGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| 3UTR CAA 72 bp | TGGCTGTATCCTCTGTCCTCAGTAGGACCCAGTCATTaGCTCTTCTGCTGTGTCAGCAAAATCCACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WLYPLSSVGPSH*LFCCVSKIHSA Trigger: TGCACTGTGGATTTTGCTGACACAGCAGAAGAGCAAATGACTGGGTCCTACTGAGGACAGAGGATACAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
||
| CDS-3UTR TCA 90 bp | CTAGGCCCTACCAATGTTAAATTGTACTGCAATTGGTCTTCCAGGAAGCATGGGCGTGACAATGGTGGCTaGGCCTCTTCACTCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGPTNVKLYCNWSSRKHGRDNGG*ASSLCS Trigger: AGAACAGAGTGAAGAGGCTCAGCCACCATTGTCACG...CCCATGCTTCCTGGAAGACCAATTGCAGTACAATTTAACATTGGTAGGGCCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR GCA 90 bp | TTAGCCAGACTTTTCCTCTTTGAGTGGAATTTCCTATTTTCCCTCCAACTTGGTCCATGCAAAGGTGCTTaGACCACTCCTCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LARLFLFEWNFLFSLQLGPCKGA*TTPQPP Trigger: TGGAGGCTGAGGAGTGGTGCAAGCACCTTTGCATGG...ACCAAGTTGGAGGGAAAATAGGAAATTCCACTCAAAGAGGAAAAGTCTGGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CAA 72 bp | CACGGAGAGCAGGAGAAAAACCTTCCCAGCTGTTTATaGCCTCTGAACAAACTACAAAGCCCTCAGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HGEQEKNLPSCL*PLNKLQSPQVS Trigger: TGAAACCTGAGGGCTTTGTAGTTTGTTCAGAGGCAATAAACAGCTGGGAAGGTTTTTCTCCTGCTCTCCGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR GCA 90 bp | TCTGCCAAAACTGAAAAAGTCACAGGGCTTGCAGTAGGTCATCATATGTCTAAATCCCTAGCTTCCTGCTaGGGATTTTCACGTAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SAKTEKVTGLAVGHHMSKSLASC*GFSRSP Trigger: AGGGCTACGTGAAAATCCGCAGCAGGAAGCTAGGGA...TTTAGACATATGATGACCTACTGCAAGCCCTGTGACTTTTTCAGTTTTGGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR GCA 90 bp | TTAGCCAGACTTTTCCTCTTTGAGTGGAATTTCCTATTTTCCCTCCAACTTGGTCATTCCATGCAAAGGTaGTTGCACCACTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LARLFLFEWNFLFSLQLGHSMQR*LHHSSA Trigger: GGCTGAGGAGTGGTGCAAGCACCTTTGCATGGAATG...ACCAAGTTGGAGGGAAAATAGGAAATTCCACTCAAAGAGGAAAAGTCTGGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CAA 72 bp | AATCCTACTGGACTTGCTATCTGTGCTTCTGGCACATaGATAAAGCTGAGATGTGAATCAAGACCCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPTGLAICASGT*IKLRCESRPPQ Trigger: CTGAGGGGGTCTTGATTCACATCTCAGCTTTATCAATGTGCCAGAAGCACAGATAGCAAGTCCAGTAGGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR GCA 90 bp | TTACAAGTGAAACATTTTCTCCTTTCATCCCAGCCAAGTAAGTTCAGTATAAGATCATTCTGTTCCCGCTaGACCCCAGCTGCCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQVKHFLLSSQPSKFSIRSFCSR*TPAASR Trigger: CCTACTGGCAGCTGGGGTGCAGCGGGAACAGAATGA...TCTTATACTGAACTTACTTGGCTGGGATGAAAGGAGAAAATGTTTCACTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR CCA 90 bp | CTAGGCCCTACCAATGTTAAATTGTACTGCAATTGGTCTTCCAGGAAGCATGGGGAAATGTCTGTGCCCTaGACATCTTTGATGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGPTNVKLYCNWSSRKHGEMSVP*TSLMNQ Trigger: TTGGTTCATCAAAGATGTCCAGGGCACAGACATTTC...CCCATGCTTCCTGGAAGACCAATTGCAGTACAATTTAACATTGGTAGGGCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR CCA 90 bp | TTTATGAGGCTACGGGAGACTGCCACAAGTATCTTCTCATCTTTGGTTTATATAGTTCTGGAGCATAGCTaGGAAATGTCTGTGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FMRLRETATSIFSSLVYIVLEHS*EMSVPW Trigger: CCAGGGCACAGACATTTCCCAGCTATGCTCCAGAAC...TATATAAACCAAAGATGAGAAGATACTTGTGGCAGTCTCCCGTAGCCTCATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CAA 72 bp | CCACCAGGGAAACATAAAAGGAATCTTTCACTCTGTTaGACCTTTCCATTGCTGCCACGGTTTAATCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PPGKHKRNLSLC*TFPLLPRFNPI Trigger: GATGGGATTAAACCGTGGCAGCAATGGAAAGGTCAAACAGAGTGAAAGATTCCTTTTATGTTTCCCTGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CAA 72 bp | GATTGCTATGAAGAGCAAGCATCACTGTTCTGCATGTaGCCTTCATTCTGTCCATTTCTCACATACCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DCYEEQASLFCM*PSFCPFLTYPV Trigger: CACAGGGTATGTGAGAAATGGACAGAATGAAGGCAACATGCAGAACAGTGATGCTTGCTCTTCATAGCAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR TCA 90 bp | TTACAAGTGAAACATTTTCTCCTTTCATCCCAGCCAAGTAAGTTCAGTATAAGACAGGCTCCCCTAGGCTaGTGTCATTCAGTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQVKHFLLSSQPSKFSIRQAPLG*CHSVLS Trigger: GGACAAGACTGAATGACATCAGCCTAGGGGAGCCTG...TCTTATACTGAACTTACTTGGCTGGGATGAAAGGAGAAAATGTTTCACTTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR TCA 90 bp | TCTGCCAAAACTGAAAAAGTCACAGGGCTTGCAGTAGGTCATCATATGTCTAAAGTCACACATTCTTCCTaGCTCGAAGGTGAACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAKTEKVTGLAVGHHMSKVTHSS*LEGEPS Trigger: ACTTGGTTCACCTTCGAGTCAGGAAGAATGTGTGAC...TTTAGACATATGATGACCTACTGCAAGCCCTGTGACTTTTTCAGTTTTGGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR TCA 90 bp | CTAGGCCCTACCAATGTTAAATTGTACTGCAATTGGTCTTCCAGGAAGCATGGGTCTCCTTCCCTTGTTTaGAAAGTGAATAGTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGPTNVKLYCNWSSRKHGSPSLV*KVNSPS Trigger: AGAAGGACTATTCACTTTTCAAACAAGGGAAGGAGA...CCCATGCTTCCTGGAAGACCAATTGCAGTACAATTTAACATTGGTAGGGCCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR GCA 90 bp | TCTGCCAAAACTGAAAAAGTCACAGGGCTTGCAGTAGGTCATCATATGTCTAAATGCAGCCGGGCCTTCTaGTCCATTTCTAGCATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SAKTEKVTGLAVGHHMSKCSRAF*SISSIN Trigger: ATTAATGCTAGAAATGGAGCAGAAGGCCCGGCTGCA...TTTAGACATATGATGACCTACTGCAAGCCCTGTGACTTTTTCAGTTTTGGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR TCA 90 bp | CATTTGTTCTCCTCTCTTGACTACATGATGGCTGAGTTTACTTTAAGATCAGTTCTCAGCCTCCAGCTCTaGCTCACAAGCAAATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLFSSLDYMMAEFTLRSVLSLQL*LTSKCL Trigger: AAGACATTTGCTTGTGAGTCAGAGCTGGAGGCTGAG...AACTGATCTTAAAGTAAACTCAGCCATCATGTAGTCAAGAGAGGAGAACAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR GCA 90 bp | AATAACTGTAGAGATATTTCAAGGTTCACACTCTTGAGTAAGAAAGAATGGGCTTCCCCAGGCATTCCATaGAAAGGTGCTTGCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: NNCRDISRFTLLSKKEWASPGIP*KGACTT Trigger: AGTGGTGCAAGCACCTTTGCATGGAATGCCTGGGGA...AGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR CCA 90 bp | TTAGCCAGACTTTTCCTCTTTGAGTGGAATTTCCTATTTTCCCTCCAACTTGGTTCCGAGGAAGAGAGATaGATTTCGATAACGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: LARLFLFEWNFLFSLQLGSEEER*ISITSS Trigger: CGATGACGTTATCGAAATCCATCTCTCTTCCTCGGA...ACCAAGTTGGAGGGAAAATAGGAAATTCCACTCAAAGAGGAAAAGTCTGGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR CCA 90 bp | TTAGCCAGACTTTTCCTCTTTGAGTGGAATTTCCTATTTTCCCTCCAACTTGGTCTCTTCACTCTGTTCTaGAGCATAGCTGGGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LARLFLFEWNFLFSLQLGLFTLF*SIAGKC Trigger: ACATTTCCCAGCTATGCTCCAGAACAGAGTGAAGAG...ACCAAGTTGGAGGGAAAATAGGAAATTCCACTCAAAGAGGAAAAGTCTGGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR TCA 90 bp | AATAACTGTAGAGATATTTCAAGGTTCACACTCTTGAGTAAGAAAGAATGGGCTTTCCTGACTCGAAGGTaGACCAAGTTGAATCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: NNCRDISRFTLLSKKEWAFLTRR*TKLNPD Trigger: GTCGGGATTCAACTTGGTTCACCTTCGAGTCAGGAA...AGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR GCA 90 bp | CATTTGTTCTCCTCTCTTGACTACATGATGGCTGAGTTTACTTTAAGATCAGTTATATCCCTAGCTTCCTaGTGCGGATTTTCACGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLFSSLDYMMAEFTLRSVISLAS*CGFSRS Trigger: GCTACGTGAAAATCCGCAGCAGGAAGCTAGGGATAT...AACTGATCTTAAAGTAAACTCAGCCATCATGTAGTCAAGAGAGGAGAACAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR GCA 90 bp | CTAGGCCCTACCAATGTTAAATTGTACTGCAATTGGTCTTCCAGGAAGCATGGGGTTTCTGAAATAAGCTaGCTTTTCATCTGGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LGPTNVKLYCNWSSRKHGVSEIS*LFIWKL Trigger: AAGTTTCCAGATGAAAAGGCAGCTTATTTCAGAAAC...CCCATGCTTCCTGGAAGACCAATTGCAGTACAATTTAACATTGGTAGGGCCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR GCA 90 bp | TCTGCCAAAACTGAAAAAGTCACAGGGCTTGCAGTAGGTCATCATATGTCTAAAAGCATTAATCTTTCGTaGTGCTCAGCTATAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAKTEKVTGLAVGHHMSKSINLS*CSAIAS Trigger: ACTGGCTATAGCTGAGCAGCACGAAAGATTAATGCT...TTTAGACATATGATGACCTACTGCAAGCCCTGTGACTTTTTCAGTTTTGGCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR TCA 90 bp | TTTATGAGGCTACGGGAGACTGCCACAAGTATCTTCTCATCTTTGGTTTATATACCCTTGTTTGAAAAGTaGATAGTCCTTCTCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FMRLRETATSIFSSLVYIPLFEK*IVLLLC Trigger: ACACAGGAGAAGGACTATTCACTTTTCAAACAAGGG...TATATAAACCAAAGATGAGAAGATACTTGTGGCAGTCTCCCGTAGCCTCATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR GCA 90 bp | CATTTGTTCTCCTCTCTTGACTACATGATGGCTGAGTTTACTTTAAGATCAGTTAATGTGATGCCAGTATaGACTCCGAGGAAGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HLFSSLDYMMAEFTLRSVNVMPV*TPRKRD Trigger: ATCTCTCTTCCTCGGAGTGCATACTGGCATCACATT...AACTGATCTTAAAGTAAACTCAGCCATCATGTAGTCAAGAGAGGAGAACAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR GCA 90 bp | AATAACTGTAGAGATATTTCAAGGTTCACACTCTTGAGTAAGAAAGAATGGGCTATAATTGCCACTGCATaGTTCTTTGTCTCTCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NNCRDISRFTLLSKKEWAIIATA*FFVSRG Trigger: GCCTCGAGAGACAAAGAAGCATGCAGTGGCAATTAT...AGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CAA 72 bp | TGTCTTTCTCCAACATTTTGGAGTCTCCATTTGGAGTaGGATATTACACCAATTCCTCAAGTACTTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CLSPTFWSLHLE*DITPIPQVLLM Trigger: CATCAGAAGTACTTGAGGAATTGGTGTAATATCCAACTCCAAATGGAGACTCCAAAATGTTGGAGAAAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CAA 72 bp | AGGCTACGGGAGACTGCCACAAGTATCTTCTCATCTTaGGTTTATATAGGTTCATCTGTTTGTCTCTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RLRETATSIFSS*VYIGSSVCLFY Trigger: ATAAAAGAGACAAACAGATGAACCTATATAAACCAAAGATGAGAAGATACTTGTGGCAGTCTCCCGTAGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR TCA 90 bp | TTTATGAGGCTACGGGAGACTGCCACAAGTATCTTCTCATCTTTGGTTTATATACCTTGTGAAAGTTTCTaGAATAAGCTGCCTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FMRLRETATSIFSSLVYIPCESF*NKLPFH Trigger: ATGAAAAGGCAGCTTATTTCAGAAACTTTCACAAGG...TATATAAACCAAAGATGAGAAGATACTTGTGGCAGTCTCCCGTAGCCTCATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR TCA 90 bp | TTACAAGTGAAACATTTTCTCCTTTCATCCCAGCCAAGTAAGTTCAGTATAAGAACAAGCAAATGTCTTTaGCGTTTCGTCATGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQVKHFLLSSQPSKFSIRTSKCL*RFVMKD Trigger: ATCTTTCATGACGAAACGTCAAAGACATTTGCTTGT...TCTTATACTGAACTTACTTGGCTGGGATGAAAGGAGAAAATGTTTCACTTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR GCA 90 bp | AATAACTGTAGAGATATTTCAAGGTTCACACTCTTGAGTAAGAAAGAATGGGCTGTCATGAAAGATAATTaGCACTGCATGCTTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NNCRDISRFTLLSKKEWAVMKDN*HCMLLC Trigger: ACAAAGAAGCATGCAGTGGCAATTATCTTTCATGAC...AGCCCATTCTTTCTTACTCAAGAGTGTGAACCTTGAAATATCTCTACAGTTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CAA 72 bp | GTTTTATGTCTTTCTCCAACATTTTGGAGTCTCCATTaGGAGTTGGATATTACACCAATTCCTCAAGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: VLCLSPTFWSLH*ELDITPIPQVL Trigger: AAGTACTTGAGGAATTGGTGTAATATCCAACTCCAAATGGAGACTCCAAAATGTTGGAGAAAGACATAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| 3UTR CAA 72 bp | ACAGTGGTCCAAGTTCATTTACACTTTTCTGCATATTaGATGCAATGTTATGTGTCACAGGTTGCATGTATA | + |
|
Preference number: 4 (lower is better) Translates to: TVVQVHLHFSAY*MQCYVSQVACI Trigger: TATACATGCAACCTGTGACACATAACATTGCATCAAATATGCAGAAAAGTGTAAATGAACTTGGACCACTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR CAA 90 bp | CTCACATACCCTGTGGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTTCTGAGTCCATGCAAAGGTGCTaGCACCACTCCTCAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTYPVVCEMCFSQDGSSESMQRC*HHSSAS Trigger: GGAGGCTGAGGAGTGGTGCAAGCACCTTTGCATGGA...CTCAGAAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS CCA 90 bp | CCTCTTCACTCTGTTCTGGAGCATAGCTGGGAAATGTCTGTGCCCTaGACATCTTTGATGAACCAAACCCATGACCTTGCAAGCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLHSVLEHSWEMSVP*TSLMNQTHDLASCR Trigger: TCTACAGCTTGCAAGGTCATGGGTTTGGTTCATCAAAGATGTCCAGGGCACAGACATTTCCCAGCTATGCTCCAGAACAGAGTGAAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR CAA 90 bp | CTCACATACCCTGTGGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTTCTGAGGGCCACATCACTAGCTaGACCTTCGCATTGTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LTYPVVCEMCFSQDGSSEGHITS*TFALWI Trigger: TATCCACAATGCGAAGGTCAAGCTAGTGATGTGGCC...CTCAGAAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR CAA 90 bp | CTAGGCCCTACCAATGTTAAATTGTACTGCAATTGGTCTTCCAGGAAGCATGGGACCAAACCCATGACCTaGCAAGCTGTAGATTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGPTNVKLYCNWSSRKHGTKPMT*QAVDFP Trigger: GGGGAAATCTACAGCTTGCAAGGTCATGGGTTTGGT...CCCATGCTTCCTGGAAGACCAATTGCAGTACAATTTAACATTGGTAGGGCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR CAA 90 bp | CTCACATACCCTGTGGTCTGTGAGATGTGTTTCTCTCAAGATGGTTCTTCTGAGGTGCCCTGGACATCTTaGATGAACCAAACCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: LTYPVVCEMCFSQDGSSEVPWTS*MNQTHD Trigger: GTCATGGGTTTGGTTCATCAAAGATGTCCAGGGCAC...CTCAGAAGAACCATCTTGAGAGAAACACATCTCACAGACCACAGGGTATGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS-3UTR CAA 90 bp | TTACAAGTGAAACATTTTCTCCTTTCATCCCAGCCAAGTAAGTTCAGTATAAGACACAAGCAAATGTCTTaGACGTTTCGTCATGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQVKHFLLSSQPSKFSIRHKQMS*TFRHER Trigger: TCTTTCATGACGAAACGTCAAAGACATTTGCTTGTG...TCTTATACTGAACTTACTTGGCTGGGATGAAAGGAGAAAATGTTTCACTTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS TCA 72 bp | GCTGGAGCTATAGCTGAATCCATAGCTGCTGGACCGTaGCAATGGTGGCTGAGCCTCTTCACTCTGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGAIAESIAAGP*QWWLSLFTLFW Trigger: CCAGAACAGAGTGAAGAGGCTCAGCCACCATTGTCACGGTCCAGCAGCTATGGATTCAGCTATAGCTCCAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS TCA 72 bp | CTTCTCCTGTGTCACACATTCTTCCTGACTCGAAGGTaGACCAAGTTGAATCCCGACCATATCTCCTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: LLLCHTFFLTRR*TKLNPDHISSA Trigger: CGCTGAGGAGATATGGTCGGGATTCAACTTGGTTCACCTTCGAGTCAGGAAGAATGTGTGACACAGGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS GCA 72 bp | GCCTTCTGCTCCATTTCTAGCATTAATCTTTCGTGCTaGTCAGCTATAGCCAGTGTTGCAGAGTGGACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AFCSISSINLSC*SAIASVAEWTF Trigger: GAAGGTCCACTCTGCAACACTGGCTATAGCTGAGCAGCACGAAAGATTAATGCTAGAAATGGAGCAGAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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| CDS CCA 72 bp | TCTGTTCTGGAGCATAGCTGGGAAATGTCTGTGCCCTaGACATCTTTGATGAACCAAACCCATGACCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SVLEHSWEMSVP*TSLMNQTHDLA Trigger: TGCAAGGTCATGGGTTTGGTTCATCAAAGATGTCCAGGGCACAGACATTTCCCAGCTATGCTCCAGAACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097495.5 |
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