Pregenerated sensors for DOK5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027560Ensembl transcript IDs: ENSMUST00000029075.5
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGCAGCGTTTCCCGTGGCCACACACATTAGCAGGGTGCGAAGCTaGTCTTCTTCATCTGCACTCTCCCTGGCTGTCCCTCTGTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: SAAFPVATHISRVRS*SSSSALSLAVPLCP Trigger: AGGACACAGAGGGACAGCCAGGGAGAGTGCAGATGAAGAAGAGCAGCTTCGCACCCTGCTAATGTGTGTGGCCACGGGAAACGCTGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| 3UTR CCA 90 bp | CTTCATCTGCACTCTCCCTGGCTGTCCCTCTGTGTCCTCCTGCTGTaGCTGACACAGCACAAATGTGCTAACAGCTCTTGGCGGTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: LHLHSPWLSLCVLLL*LTQHKCANSSWRLL Trigger: CAGCAACCGCCAAGAGCTGTTAGCACATTTGTGCTGTGTCAGCCACAGCAGGAGGACACAGAGGGACAGCCAGGGAGAGTGCAGATGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| 3UTR GCA 90 bp | TATGTTGTTCTGCAGCGTTTCCCGTGGCCACACACATTAGCAGGGTaGGAAGCTGCTCTTCTTCATCTGCACTCTCCCTGGCTGTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: YVVLQRFPWPHTLAG*EAALLHLHSPWLSL Trigger: GAGGGACAGCCAGGGAGAGTGCAGATGAAGAAGAGCAGCTTCGCACCCTGCTAATGTGTGTGGCCACGGGAAACGCTGCAGAACAACATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| 3UTR-3UTR CCA 90 bp | GACTCAGAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTATGTGTCCTCCTGCTGTaGCTGACACAGCACAAATGT | + |
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Preference number: 2 (lower is better) Translates to: DSERHRGHLSPIENQSVVCVLLL*LTQHKC Trigger: ACATTTGTGCTGTGTCAGCCACAGCAGGAGGACACA...TACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTCTGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGACTGCAGCGTTTCCCGTaGCCACACACATTAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RGILLSMMTVLRRKHLQGLQRFP*PHTLAG Trigger: CCCTGCTAATGTGTGTGGCCACGGGAAACGCTGCAG...TCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATGCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| 3UTR-3UTR CCA 90 bp | CATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGAAAATCCATCTGCACTCTCCCTaGCTGTCCCTCTGTGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: HFIVHDDCLTTETLTRKIHLHSP*LSLCVL Trigger: GAGGACACAGAGGGACAGCCAGGGAGAGTGCAGATG...GATTTTCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| 3UTR-3UTR TCA 90 bp | CATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGAAAATCTCCTCCTGCTGTGGCTaGCACAGCACAAATGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: HFIVHDDCLTTETLTRKISSCCG*HSTNVL Trigger: TAGCACATTTGTGCTGTGTCAGCCACAGCAGGAGGA...GATTTTCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| 3UTR-3UTR GCA 90 bp | CATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGAAAATCAGCAGGGTGCGAAGCTaGTCTTCTTCATCTGCACTC | + |
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Preference number: 2 (lower is better) Translates to: HFIVHDDCLTTETLTRKISRVRS*SSSSAL Trigger: GAGTGCAGATGAAGAAGAGCAGCTTCGCACCCTGCT...GATTTTCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGACACACATTAGCAGGGTaGGAAGCTGCTCTTCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: RGILLSMMTVLRRKHLQGHTLAG*EAALLH Trigger: ATGAAGAAGAGCAGCTTCGCACCCTGCTAATGTGTG...TCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATGCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| 3UTR GCA 72 bp | TTTCCCGTGGCCACACACATTAGCAGGGTGCGAAGCTaGTCTTCTTCATCTGCACTCTCCCTGGCTGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: FPVATHISRVRS*SSSSALSLAVP Trigger: AGGGACAGCCAGGGAGAGTGCAGATGAAGAAGAGCAGCTTCGCACCCTGCTAATGTGTGTGGCCACGGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| 3UTR-3UTR CAA 90 bp | AGAGGCATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGAATATTTATACATATGTaGTTCTGCAGCGTTTCCCGT | + |
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Preference number: 3 (lower is better) Translates to: RGILLSMMTVLRRKHLQGIFIHM*FCSVSR Trigger: ACGGGAAACGCTGCAGAACAACATATGTATAAATAT...TCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATGCCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR GCA 90 bp | CTCAGAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAGCGCTGCCAGTAGGCGCTaGGGGGCAGGGGCACCACGG | + |
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Preference number: 4 (lower is better) Translates to: LREAQGALVTNRKSVRGSAASRR*GAGAPR Trigger: CCGTGGTGCCCCTGCCCCGCAGCGCCTACTGGCAGC...GCTACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR GCA 90 bp | CTCAGAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAGCGCAGGGGCACCACGGTaGTCAGCGACGCTGCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: LREAQGALVTNRKSVRGSAGAPR*SATLPA Trigger: AGCGGGCAGCGTCGCTGAGCACCGTGGTGCCCCTGC...GCTACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTCTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR TCA 90 bp | CTCAGAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAGCAAAGTCTCTGTCCGGTaGAGCTTCAGCGGGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LREAQGALVTNRKSVRGSKVSVR*SFSGLV Trigger: CACCAGCCCGCTGAAGCTTCACCGGACAGAGACTTT...GCTACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR GCA 90 bp | GAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAGCAACAGGTGCTCAGCGACGCTaGCCGCTCGCTCTTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: ERHRGHLSPIENQSVVATGAQRR*PLALLH Trigger: ATGAAGAAGAGCGAGCGGGCAGCGTCGCTGAGCACC...TGTTGCTACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR CCA 90 bp | CTCAGAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAGCCCCACACACTCCATCTaGAGAACTTTGCACCATTCG | + |
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Preference number: 4 (lower is better) Translates to: LREAQGALVTNRKSVRGSPTHSI*RTLHHS Trigger: CGAATGGTGCAAAGTTCTCCAGATGGAGTGTGTGGG...GCTACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTCTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR CCA 90 bp | GAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAGCAACACTTCTCCAGTCTCTTTaGACCCTTGCTCGAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: ERHRGHLSPIENQSVVATLLQSL*TLARSF Trigger: AAAGCTTCGAGCAAGGGTCCAAAGAGACTGGAGAAG...TGTTGCTACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR CCA 90 bp | GAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAGCAACATTAACTCTGGGATTCTaGACGTCCCAAAGACAGATG | + |
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Preference number: 4 (lower is better) Translates to: ERHRGHLSPIENQSVVATLTLGF*TSQRQM Trigger: CATCTGTCTTTGGGACGTCCAGAATCCCAGAGTTAA...TGTTGCTACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR GCA 90 bp | CTCAGAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAGCTACTCATATGTAATCTaGAAGGCACATTCGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: LREAQGALVTNRKSVRGSYSYVI*KAHSPC Trigger: ACATGGCGAATGTGCCTTGCAGATTACATATGAGTA...GCTACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTCTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR CCA 90 bp | CTCAGAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAGCTTTCTTGGTGCTCTTTaGCAATCGGGCTACATTTTT | + |
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Preference number: 4 (lower is better) Translates to: LREAQGALVTNRKSVRGSFLGAL*QSGYIF Trigger: AAAAATGTAGCCCGATTGCCAAAGAGCACCAAGAAA...GCTACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTCTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR CCA 90 bp | GAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAGCAACATCTTCATCTGGAGCATaGAATTTTTCACGCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ERHRGHLSPIENQSVVATSSSGA*NFSRSA Trigger: TGCAGAGCGTGAAAAATTCCATGCTCCAGATGAAGA...TGTTGCTACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR CCA 90 bp | GAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAGCAACATCGCTCTTCTTCATCTaGAGCATGGAATTTTTCACG | + |
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Preference number: 4 (lower is better) Translates to: ERHRGHLSPIENQSVVATSLFFI*SMEFFT Trigger: CGTGAAAAATTCCATGCTCCAGATGAAGAAGAGCGA...TGTTGCTACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR CCA 90 bp | AGAGGCATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGAGCTCAGACCGGTAGGTaGGGAAAGTCTCTGTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: RGILLSMMTVLRRKHLQGAQTGR*GKSLSG Trigger: ACCGGACAGAGACTTTCCCCACCTACCGGTCTGAGC...TCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATGCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR TCA 90 bp | GACTCAGAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTATCTCCGTCTCGTGTTTaGAAAATAAATAACCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: DSERHRGHLSPIENQSVVSPSRV*KINNPS Trigger: CGAAGGGTTATTTATTTTTCAAACACGAGACGGAGA...TACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTCTGAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR GCA 90 bp | GAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAGCAACAATCCTCACGTACCCCTaGTTCACTATGTCATTAAAA | + |
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Preference number: 4 (lower is better) Translates to: ERHRGHLSPIENQSVVATILTYP*FTMSLK Trigger: TTTTAATGACATAGTGAAGCAGGGGTACGTGAGGAT...TGTTGCTACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR GCA 90 bp | AGAGGCATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGAAAATCCCTAGGCGTCTaGTCCGGATCCTCACGTACC | + |
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Preference number: 4 (lower is better) Translates to: RGILLSMMTVLRRKHLQGKSLGV*SGSSRT Trigger: GGTACGTGAGGATCCGGAGCAGACGCCTAGGGATTT...TCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR TCA 90 bp | CATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGAAAATCTCCCTGCCTCAAAAGTaGACCACGTGGTGTCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: HFIVHDDCLTTETLTRKISLPQK*TTWCLV Trigger: GACGAGACACCACGTGGTTCACTTTTGAGGCAGGGA...GATTTTCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR TCA 90 bp | CATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGAAAATCGGGCTGGTGACATCTTaGAGGTGGTACAGCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: HFIVHDDCLTTETLTRKIGLVTS*RWYSCP Trigger: AGGACAGCTGTACCACCTTCAAGATGTCACCAGCCC...GATTTTCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR TCA 90 bp | AGAGGCATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGAGTCTGCCTCAAGATCTaGTTCACAGGCAAAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: RGILLSMMTVLRRKHLQGVCLKI*FTGKGL Trigger: AAGACCTTTGCCTGTGAATCAGATCTTGAGGCAGAC...TCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATGCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR TCA 90 bp | CATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGAAAATCGCATCAAATACACATTaGACCTCTCGCTCTGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: HFIVHDDCLTTETLTRKIASNTH*TSRSAR Trigger: GCGAGCAGAGCGAGAGGTTCAATGTGTATTTGATGC...GATTTTCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR GCA 90 bp | CATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGAAAATCCTCACACATCCTCCCTaGCTCAAAAGTGAACCACGT | + |
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Preference number: 4 (lower is better) Translates to: HFIVHDDCLTTETLTRKILTHPP*LKSEPR Trigger: ACGTGGTTCACTTTTGAGGCAGGGAGGATGTGTGAG...GATTTTCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CCA 90 bp | GGCACCACGGTGCTCAGCGACGCTGCCCGCTCGCTCTTCTTCATCTaGAGCATGGAATTTTTCACGCTCTGCAGCAGCCGTTCATGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GTTVLSDAARSLFFI*SMEFFTLCSSRSCC Trigger: GCAGCATGAACGGCTGCTGCAGAGCGTGAAAAATTCCATGCTCCAGATGAAGAAGAGCGAGCGGGCAGCGTCGCTGAGCACCGTGGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS TCA 90 bp | GGTAGGTGGGGAAAGTCTCTGTCCGGTGAAGCTTCAGCGGGCTGGTaGCATCTTGAAGGTGGTACAGCTGTCCTGTGCTGTGCTGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: GRWGKSLSGEASAGW*HLEGGTAVLCCAAS Trigger: CGAGGCAGCACAGCACAGGACAGCTGTACCACCTTCAAGATGTCACCAGCCCGCTGAAGCTTCACCGGACAGAGACTTTCCCCACCTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CCA 90 bp | CGGTGCTCAGCGACGCTGCCCGCTCGCTCTTCTTCATCTGGAGCATaGAATTTTTCACGCTCTGCAGCAGCCGTTCATGCTGCTCAGCTA | + |
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Preference number: 5 (lower is better) Translates to: RCSATLPARSSSSGA*NFSRSAAAVHAAQL Trigger: TAGCTGAGCAGCATGAACGGCTGCTGCAGAGCGTGAAAAATTCCATGCTCCAGATGAAGAAGAGCGAGCGGGCAGCGTCGCTGAGCACCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR CAA 90 bp | GACTCAGAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAACTTCTCCAGTCTCTTaGGACCCTTGCTCGAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: DSERHRGHLSPIENQSVVTSPVS*DPCSKL Trigger: AAGCTTCGAGCAAGGGTCCAAAGAGACTGGAGAAGT...TACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTCTGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CCA 90 bp | TCTCCGAGGCTGATGTCATTGATTCTGGTCCCCACACACTCCATCTaGAGAACTTTGCACCATTCGTCTGCCTCAAGATCTGATTCACAG | + |
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Preference number: 5 (lower is better) Translates to: SPRLMSLILVPTHSI*RTLHHSSASRSDSQ Trigger: CTGTGAATCAGATCTTGAGGCAGACGAATGGTGCAAAGTTCTCCAGATGGAGTGTGTGGGGACCAGAATCAATGACATCAGCCTCGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR CAA 90 bp | CTCAGAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAGCGTTTCTTGGTGCTCTTaGGCAATCGGGCTACATTTT | + |
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Preference number: 5 (lower is better) Translates to: LREAQGALVTNRKSVRGSVSWCS*AIGLHF Trigger: AAAATGTAGCCCGATTGCCAAAGAGCACCAAGAAAC...GCTACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR CAA 90 bp | GACTCAGAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTACCTATAGCATGTTTCTaGGTGCTCTTTGGCAATCGG | + |
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Preference number: 5 (lower is better) Translates to: DSERHRGHLSPIENQSVVPIACF*VLFGNR Trigger: CCGATTGCCAAAGAGCACCAAGAAACATGCTATAGG...TACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTCTGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS TCA 90 bp | TTCTGTAACCTTGTGGTAACACCTGAAGTACGCGGCCCGTTCATCTaGGAACTTCTCCAGTCTCTTTGGACCCTTGCTCGAAGCTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: FCNLVVTPEVRGPFI*ELLQSLWTLARSFL Trigger: AAGAAAGCTTCGAGCAAGGGTCCAAAGAGACTGGAGAAGTTCTCAGATGAACGGGCCGCGTACTTCAGGTGTTACCACAAGGTTACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CCA 90 bp | CGCAGGGCACTTAGCGGCCAAGAGATGAGTTTAACTCTGGGATTCTaGACGTCCCAAAGACAGATGTACTCATATGTAATCTGCAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RRALSGQEMSLTLGF*TSQRQMYSYVICKA Trigger: TGCCTTGCAGATTACATATGAGTACATCTGTCTTTGGGACGTCCAGAATCCCAGAGTTAAACTCATCTCTTGGCCGCTAAGTGCCCTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR CAA 90 bp | CTCAGAGAGGCACAGGGGGCACTTGTCACCAATAGAAAATCAGTCCGTGGTAGCACATTTTTCACATTGTaGAGTTCTGTAACCTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LREAQGALVTNRKSVRGSTFFTL*SSVTLW Trigger: CCACAAGGTTACAGAACTCAACAATGTGAAAAATGT...GCTACCACGGACTGATTTTCTATTGGTGACAAGTGCCCCCTGTGCCTCTCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS GCA 90 bp | CTGGGATTCTGGACGTCCCAAAGACAGATGTACTCATATGTAATCTaGAAGGCACATTCGCCATGTACATCTAAGTTAGGAGATGGCATC | + |
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Preference number: 5 (lower is better) Translates to: LGFWTSQRQMYSYVI*KAHSPCTSKLGDGI Trigger: GATGCCATCTCCTAACTTAGATGTACATGGCGAATGTGCCTTGCAGATTACATATGAGTACATCTGTCTTTGGGACGTCCAGAATCCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR CAA 90 bp | CATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGAAAATCTCCATCTGGAGAACTTaGCACCATTCGTCTGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: HFIVHDDCLTTETLTRKISIWRT*HHSSAS Trigger: TGAGGCAGACGAATGGTGCAAAGTTCTCCAGATGGA...GATTTTCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR CAA 90 bp | CATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGAAAATCGGCATCAAATACACATaGAACCTCTCGCTCTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: HFIVHDDCLTTETLTRKIGIKYT*NLSLCS Trigger: CGAGCAGAGCGAGAGGTTCAATGTGTATTTGATGCC...GATTTTCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS-3UTR CAA 90 bp | AGAGGCATTTTATTGTCCATGATGACTGTCTTACGACGGAAACACTTACAAGGAGCTACATTTTTCACATaGTTGAGTTCTGTAACCTTG | + |
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Preference number: 5 (lower is better) Translates to: RGILLSMMTVLRRKHLQGATFFT*LSSVTL Trigger: CAAGGTTACAGAACTCAACAATGTGAAAAATGTAGC...TCCTTGTAAGTGTTTCCGTCGTAAGACAGTCATCATGGACAATAAAATGCCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CCA 90 bp | GTCATCATTGAAATAAATCCCTATAGCATGTTTCTTGGTGCTCTTTaGCAATCGGGCTACATTTTTCACATTGTTGAGTTCTGTAACCTT | + |
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Preference number: 5 (lower is better) Translates to: VIIEINPYSMFLGAL*QSGYIFHIVEFCNL Trigger: AAGGTTACAGAACTCAACAATGTGAAAAATGTAGCCCGATTGCCAAAGAGCACCAAGAAACATGCTATAGGGATTTATTTCAATGATGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS GCA 72 bp | GCTGCCAGTAGGCGCTGCGGGGCAGGGGCACCACGGTaGTCAGCGACGCTGCCCGCTCGCTCTTCTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: AASRRCGAGAPR*SATLPARSSSS Trigger: AGATGAAGAAGAGCGAGCGGGCAGCGTCGCTGAGCACCGTGGTGCCCCTGCCCCGCAGCGCCTACTGGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS GCA 72 bp | GCTGCGGGGCAGGGGCACCACGGTGCTCAGCGACGCTaGCCGCTCGCTCTTCTTCATCTGGAGCATGGAATT | + |
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Preference number: 6 (lower is better) Translates to: AAGQGHHGAQRR*PLALLHLEHGI Trigger: AATTCCATGCTCCAGATGAAGAAGAGCGAGCGGGCAGCGTCGCTGAGCACCGTGGTGCCCCTGCCCCGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS TCA 72 bp | GAAGGTGGTACAGCTGTCCTGTGCTGTGCTGCCTCGTaGTATGCTGCCAGTAGGCGCTGCGGGGCAGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: EGGTAVLCCAAS*YAASRRCGAGA Trigger: TGCCCCTGCCCCGCAGCGCCTACTGGCAGCATATCACGAGGCAGCACAGCACAGGACAGCTGTACCACCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CAA 90 bp | GGGGAAAGTCTCTGTCCGGTGAAGCTTCAGCGGGCTGGTGACATCTaGAAGGTGGTACAGCTGTCCTGTGCTGTGCTGCCTCGTGATATG | + |
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Preference number: 6 (lower is better) Translates to: GESLCPVKLQRAGDI*KVVQLSCAVLPRDM Trigger: CATATCACGAGGCAGCACAGCACAGGACAGCTGTACCACCTTCAAGATGTCACCAGCCCGCTGAAGCTTCACCGGACAGAGACTTTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CCA 72 bp | GCGACGCTGCCCGCTCGCTCTTCTTCATCTGGAGCATaGAATTTTTCACGCTCTGCAGCAGCCGTTCATGCT | + |
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Preference number: 6 (lower is better) Translates to: ATLPARSSSSGA*NFSRSAAAVHA Trigger: AGCATGAACGGCTGCTGCAGAGCGTGAAAAATTCCATGCTCCAGATGAAGAAGAGCGAGCGGGCAGCGTCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS TCA 72 bp | GGAAAGTCTCTGTCCGGTGAAGCTTCAGCGGGCTGGTaGCATCTTGAAGGTGGTACAGCTGTCCTGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GKSLSGEASAGW*HLEGGTAVLCC Trigger: ACAGCACAGGACAGCTGTACCACCTTCAAGATGTCACCAGCCCGCTGAAGCTTCACCGGACAGAGACTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS TCA 72 bp | CTTGTGGTAACACCTGAAGTACGCGGCCCGTTCATCTaGGAACTTCTCCAGTCTCTTTGGACCCTTGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: LVVTPEVRGPFI*ELLQSLWTLAR Trigger: TCGAGCAAGGGTCCAAAGAGACTGGAGAAGTTCTCAGATGAACGGGCCGCGTACTTCAGGTGTTACCACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS GCA 72 bp | GGAGATGGCATCAAATACACATTGAACCTCTCGCTCTaGTCGCGTTCCACCCCGGTAGCCAATAAATCAGGC | + |
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Preference number: 6 (lower is better) Translates to: GDGIKYTLNLSL*SRSTPVANKSG Trigger: GCCTGATTTATTGGCTACCGGGGTGGAACGCGAGCAGAGCGAGAGGTTCAATGTGTATTTGATGCCATCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CAA 90 bp | TCCACCCCGGTAGCCAATAAATCAGGCTCTCCGAGGCTGATGTCATaGATTCTGGTCCCCACACACTCCATCTGGAGAACTTTGCACCAT | + |
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Preference number: 6 (lower is better) Translates to: STPVANKSGSPRLMS*ILVPTHSIWRTLHH Trigger: ATGGTGCAAAGTTCTCCAGATGGAGTGTGTGGGGACCAGAATCAATGACATCAGCCTCGGAGAGCCTGATTTATTGGCTACCGGGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS GCA 72 bp | ACACTAACCAGCATCGTTGATAAATCCCTAGGCGTCTaGTCCGGATCCTCACGTACCCCTGCTTCACTATGT | + |
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Preference number: 6 (lower is better) Translates to: TLTSIVDKSLGV*SGSSRTPASLC Trigger: ACATAGTGAAGCAGGGGTACGTGAGGATCCGGAGCAGACGCCTAGGGATTTATCAACGATGCTGGTTAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS GCA 72 bp | CTCTTCTTCATCTGGAGCATGGAATTTTTCACGCTCTaGAGCAGCCGTTCATGCTGCTCAGCTATGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LFFIWSMEFFTL*SSRSCCSAMAK Trigger: CTTGGCCATAGCTGAGCAGCATGAACGGCTGCTGCAGAGCGTGAAAAATTCCATGCTCCAGATGAAGAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CAA 72 bp | GTAGCCAATAAATCAGGCTCTCCGAGGCTGATGTCATaGATTCTGGTCCCCACACACTCCATCTGGAGAACT | + |
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Preference number: 6 (lower is better) Translates to: VANKSGSPRLMS*ILVPTHSIWRT Trigger: AGTTCTCCAGATGGAGTGTGTGGGGACCAGAATCAATGACATCAGCCTCGGAGAGCCTGATTTATTGGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CAA 90 bp | CTGATGTCATTGATTCTGGTCCCCACACACTCCATCTGGAGAACTTaGCACCATTCGTCTGCCTCAAGATCTGATTCACAGGCAAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: LMSLILVPTHSIWRT*HHSSASRSDSQAKV Trigger: GACCTTTGCCTGTGAATCAGATCTTGAGGCAGACGAATGGTGCAAAGTTCTCCAGATGGAGTGTGTGGGGACCAGAATCAATGACATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CAA 72 bp | TTGATTCTGGTCCCCACACACTCCATCTGGAGAACTTaGCACCATTCGTCTGCCTCAAGATCTGATTCACAG | + |
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Preference number: 6 (lower is better) Translates to: LILVPTHSIWRT*HHSSASRSDSQ Trigger: CTGTGAATCAGATCTTGAGGCAGACGAATGGTGCAAAGTTCTCCAGATGGAGTGTGTGGGGACCAGAATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CAA 72 bp | TGTACATCTAAGTTAGGAGATGGCATCAAATACACATaGAACCTCTCGCTCTGCTCGCGTTCCACCCCGGTA | + |
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Preference number: 6 (lower is better) Translates to: CTSKLGDGIKYT*NLSLCSRSTPV Trigger: TACCGGGGTGGAACGCGAGCAGAGCGAGAGGTTCAATGTGTATTTGATGCCATCTCCTAACTTAGATGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CAA 90 bp | CATTCGCCATGTACATCTAAGTTAGGAGATGGCATCAAATACACATaGAACCTCTCGCTCTGCTCGCGTTCCACCCCGGTAGCCAATAAA | + |
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Preference number: 6 (lower is better) Translates to: HSPCTSKLGDGIKYT*NLSLCSRSTPVANK Trigger: TTTATTGGCTACCGGGGTGGAACGCGAGCAGAGCGAGAGGTTCAATGTGTATTTGATGCCATCTCCTAACTTAGATGTACATGGCGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CCA 72 bp | CTTAGCGGCCAAGAGATGAGTTTAACTCTGGGATTCTaGACGTCCCAAAGACAGATGTACTCATATGTAATC | + |
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Preference number: 6 (lower is better) Translates to: LSGQEMSLTLGF*TSQRQMYSYVI Trigger: GATTACATATGAGTACATCTGTCTTTGGGACGTCCAGAATCCCAGAGTTAAACTCATCTCTTGGCCGCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS GCA 72 bp | TGGACGTCCCAAAGACAGATGTACTCATATGTAATCTaGAAGGCACATTCGCCATGTACATCTAAGTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: WTSQRQMYSYVI*KAHSPCTSKLG Trigger: TCCTAACTTAGATGTACATGGCGAATGTGCCTTGCAGATTACATATGAGTACATCTGTCTTTGGGACGTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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| CDS CCA 72 bp | GAAATAAATCCCTATAGCATGTTTCTTGGTGCTCTTTaGCAATCGGGCTACATTTTTCACATTGTTGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: EINPYSMFLGAL*QSGYIFHIVEF Trigger: GAACTCAACAATGTGAAAAATGTAGCCCGATTGCCAAAGAGCACCAAGAAACATGCTATAGGGATTTATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029075.5 |
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