Pregenerated sensors for DOK4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040631Ensembl transcript IDs: ENSMUST00000046461.9, ENSMUST00000212810.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCAGGTGGTGTGGCCAGCCATGTGCTGAGGTCCAGCCTCACCCTTaGGGGCAAGGAGGGATAGCTTGCTCTCCTCTGGCTCTTGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: LRWCGQPCAEVQPHP*GQGGIACSPLALGH Trigger: GTGGCCAAGAGCCAGAGGAGAGCAAGCTATCCCTCCTTGCCCTCAAGGGTGAGGCTGGACCTCAGCACATGGCTGGCCACACCACCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 90 bp | CTGGCCCTTGGGCTTCTGAGGAAGAGCCAGCAGACAGCACCAGTCTaGTTGTCCCCCTCCTCTGACCCTGGCAGCTCAGGCCATCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: LALGLLRKSQQTAPV*LSPSSDPGSSGHLG Trigger: GCCAAGATGGCCTGAGCTGCCAGGGTCAGAGGAGGGGGACAATCAGACTGGTGCTGTCTGCTGGCTCTTCCTCAGAAGCCCAAGGGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 90 bp | TGGCTCTTAGCCCCTCATGCTCAGGTGGTGTGGCCAGCCATGTGCTaGGGTCCAGCCTCACCCTTGAGGGCAAGGAGGGATAGCTTGCTC | + |
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Preference number: 1 (lower is better) Translates to: WLLAPHAQVVWPAMC*GPASPLRARRDSLL Trigger: GAGCAAGCTATCCCTCCTTGCCCTCAAGGGTGAGGCTGGACCTCAGCACATGGCTGGCCACACCACCTGAGCATGAGGGGCTAAGAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 90 bp | AGGCCCAGAGGACAGAGCTACCTGCTGTCCTGGCCCTTGGGCTTCTaGGGAAGAGCCAGCAGACAGCACCAGTCTGATTGTCCCCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: RPRGQSYLLSWPLGF*GRASRQHQSDCPPP Trigger: AGGAGGGGGACAATCAGACTGGTGCTGTCTGCTGGCTCTTCCTCAGAAGCCCAAGGGCCAGGACAGCAGGTAGCTCTGTCCTCTGGGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 90 bp | GCTCTTGGCCACCAGCTCCTCGAGGCTGTCCATGGGCTGCGACAGTaGGCCTTTCAACAGGTGGCCCGGCAAATCATGAGTTCTCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: ALGHQLLEAVHGLRQ*AFQQVARQIMSSLQ Trigger: CTGGAGAGAACTCATGATTTGCCGGGCCACCTGTTGAAAGGCTCACTGTCGCAGCCCATGGACAGCCTCGAGGAGCTGGTGGCCAAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 90 bp | GAGGAAGAGCCAGCAGACAGCACCAGTCTGATTGTCCCCCTCCTCTaGCCCTGGCAGCTCAGGCCATCTTGGCAGCAGGAGAGTTGTATC | + |
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Preference number: 1 (lower is better) Translates to: EEEPADSTSLIVPLL*PWQLRPSWQQESCI Trigger: GATACAACTCTCCTGCTGCCAAGATGGCCTGAGCTGCCAGGGTCAGAGGAGGGGGACAATCAGACTGGTGCTGTCTGCTGGCTCTTCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR CCA 90 bp | GTCACTGTAGGCCCAGAGGACAGAGCTACCTGCTGTCCTGGCCCTTaGGCTTCTGAGGAAGAGCCAGCAGACAGCACCAGTCTGATTGTC | + |
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Preference number: 1 (lower is better) Translates to: VTVGPEDRATCCPGP*ASEEEPADSTSLIV Trigger: GACAATCAGACTGGTGCTGTCTGCTGGCTCTTCCTCAGAAGCCCAAGGGCCAGGACAGCAGGTAGCTCTGTCCTCTGGGCCTACAGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR GCA 90 bp | AAACCATTAACAGTGTATAGTCCCACGGTGGCTCTTAGCCCCTCATaGTCAGGTGGTGTGGCCAGCCATGTGCTGAGGTCCAGCCTCACC | + |
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Preference number: 1 (lower is better) Translates to: KPLTVYSPTVALSPS*SGGVASHVLRSSLT Trigger: GGTGAGGCTGGACCTCAGCACATGGCTGGCCACACCACCTGAGCATGAGGGGCTAAGAGCCACCGTGGGACTATACACTGTTAATGGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 90 bp | ACCCTGGCAGCTCAGGCCATCTTGGCAGCAGGAGAGTTGTATCACTaGGGACAGGCACTGCCACCCTCATACTCAAAAACAGCCTTGACC | + |
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Preference number: 1 (lower is better) Translates to: TLAAQAILAAGELYH*GQALPPSYSKTALT Trigger: GGTCAAGGCTGTTTTTGAGTATGAGGGTGGCAGTGCCTGTCCTCAGTGATACAACTCTCCTGCTGCCAAGATGGCCTGAGCTGCCAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 90 bp | TGCCTCCCTCCCAAAGGGTTGGGCCCATTTCTTGTACAAACTAGCTaGCCTCTGGGTGGTCATTTCCTGGGTCACAGAGTTGGGCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: CLPPKGLGPFLVQTS*PLGGHFLGHRVGLA Trigger: AGCCAGCCCAACTCTGTGACCCAGGAAATGACCACCCAGAGGTCAGCTAGTTTGTACAAGAAATGGGCCCAACCCTTTGGGAGGGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR CCA 90 bp | CTCCCAAAGGGTTGGGCCCATTTCTTGTACAAACTAGCTGACCTCTaGGTGGTCATTTCCTGGGTCACAGAGTTGGGCTGGCTGTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: LPKGWAHFLYKLADL*VVISWVTELGWLCH Trigger: GTGGCACAGCCAGCCCAACTCTGTGACCCAGGAAATGACCACCCAGAGGTCAGCTAGTTTGTACAAGAAATGGGCCCAACCCTTTGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 90 bp | GCCTCTGCTAAACACTCCCAAGTGCAAGGCTGCCACACGGTACAGTaGAGTTTAGGACTCTTCCTGTGTCACTGTAGGCCCAGAGGACAG | + |
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Preference number: 1 (lower is better) Translates to: ASAKHSQVQGCHTVQ*SLGLFLCHCRPRGQ Trigger: CTGTCCTCTGGGCCTACAGTGACACAGGAAGAGTCCTAAACTTCACTGTACCGTGTGGCAGCCTTGCACTTGGGAGTGTTTAGCAGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 90 bp | AAAGAGCACAACATAATCTCCTTCATGCGTCATCGTGCCACTAACTaGGCCAGTTTTGCCTCCCTCCCAAAGGGTTGGGCCCATTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: KEHNIISFMRHRATN*ASFASLPKGWAHFL Trigger: CAAGAAATGGGCCCAACCCTTTGGGAGGGAGGCAAAACTGGCTCAGTTAGTGGCACGATGACGCATGAAGGAGATTATGTTGTGCTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 90 bp | ATCACTGAGGACAGGCACTGCCACCCTCATACTCAAAAACAGCCTTaGCCATGCCTGGTCGTGGAATTAAAAATGGGTATGTGTTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: ITEDRHCHPHTQKQP*PCLVVELKMGMCWW Trigger: CCACCAACACATACCCATTTTTAATTCCACGACCAGGCATGGTCAAGGCTGTTTTTGAGTATGAGGGTGGCAGTGCCTGTCCTCAGTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR CCA 90 bp | ATCAATTGCTTTAATTGCATTTCAGCAGGGAGCCTCAGCACCGTGTaGGGAGATAGGAAAGTCTTAGTTTTGGAATCTGGCCTGGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: INCFNCISAGSLSTV*GDRKVLVLESGLGW Trigger: CCACCCCAGGCCAGATTCCAAAACTAAGACTTTCCTATCTCCCCACACGGTGCTGAGGCTCCCTGCTGAAATGCAATTAAAGCAATTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR CAA 90 bp | GCAGGGAGCCTCAGCACCGTGTGGGGAGATAGGAAAGTCTTAGTTTaGGAATCTGGCCTGGGGTGGCTGGCCTGGGCAAGGGACTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: AGSLSTVWGDRKVLV*ESGLGWLAWARDSP Trigger: GGGGGAGTCCCTTGCCCAGGCCAGCCACCCCAGGCCAGATTCCAAAACTAAGACTTTCCTATCTCCCCACACGGTGCTGAGGCTCCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGCTGGCCTGGGCAAGGGACTCCCCCTGCTGGAGCTTTATACCCCTGGTCAGGGAGAGTTGTATCACTaGGGACAGGCACTGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: VAGLGKGLPLLELYTPGQGELYH*GQALPP Trigger: GGGTGGCAGTGCCTGTCCTCAGTGATACAACTCTCC...CTGACCAGGGGTATAAAGCTCCAGCAGGGGGAGTCCCTTGCCCAGGCCAGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTGGCCTGGGCAAGGGACTCCCCCTGCTGGAGCTTTATACCCCTGGTCAGTGCTGTCCTGGCCCTTaGGCTTCTGAGGAAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: VAGLGKGLPLLELYTPGQCCPGP*ASEEEP Trigger: TGGCTCTTCCTCAGAAGCCCAAGGGCCAGGACAGCA...CTGACCAGGGGTATAAAGCTCCAGCAGGGGGAGTCCCTTGCCCAGGCCAGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGACAGCACCAGTCTGATTGTCCCCCTCCTCTGACCCTGGCAGCTCAGGCCTGGCCCGGCAAATCATaGGTTCTCTCCAGTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SRQHQSDCPPPLTLAAQAWPGKS*VLSSLA Trigger: AGCCAGACTGGAGAGAACTCATGATTTGCCGGGCCA...GGCCTGAGCTGCCAGGGTCAGAGGAGGGGGACAATCAGACTGGTGCTGTCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTCATGCTCAGGTGGTGTGGCCAGCCATGTGCTGAGGTCCAGCCTCACCCTTCAAGGAGGGATAGCTTaGTCTCCTCTGGCTCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: PSCSGGVASHVLRSSLTLQGGIA*SPLALG Trigger: GCCAAGAGCCAGAGGAGAGCAAGCTATCCCTCCTTG...AAGGGTGAGGCTGGACCTCAGCACATGGCTGGCCACACCACCTGAGCATGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTGGCCTGGGCAAGGGACTCCCCCTGCTGGAGCTTTATACCCCTGGTCAGCAGCTCAGGCCATCTTaGCAGCAGGAGAGTTGTATC | + |
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Preference number: 2 (lower is better) Translates to: VAGLGKGLPLLELYTPGQQLRPS*QQESCI Trigger: GATACAACTCTCCTGCTGCCAAGATGGCCTGAGCTG...CTGACCAGGGGTATAAAGCTCCAGCAGGGGGAGTCCCTTGCCCAGGCCAGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGTCTTAGTTTTGGAATCTGGCCTGGGGTGGCTGGCCTGGGCAAGGGACTCCACATCTTCAGCCTACTaGGCAGGAAGGGGCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: KVLVLESGLGWLAWARDSTSSAY*AGRGQC Trigger: GCACTGGCCCCTTCCTGCTCAGTAGGCTGAAGATGT...GGAGTCCCTTGCCCAGGCCAGCCACCCCAGGCCAGATTCCAAAACTAAGACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCACCAGTCTGATTGTCCCCCTCCTCTGACCCTGGCAGCTCAGGCCATCTTGTGTATAGTCCCACGGTaGCTCTTAGCCCCTCATGCT | + |
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Preference number: 2 (lower is better) Translates to: QHQSDCPPPLTLAAQAILCIVPR*LLAPHA Trigger: AGCATGAGGGGCTAAGAGCCACCGTGGGACTATACA...CAAGATGGCCTGAGCTGCCAGGGTCAGAGGAGGGGGACAATCAGACTGGTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGTCTTAGTTTTGGAATCTGGCCTGGGGTGGCTGGCCTGGGCAAGGGACTCCTGGCCCGGCAAATCATaGGTTCTCTCCAGTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: KVLVLESGLGWLAWARDSWPGKS*VLSSLA Trigger: AGCCAGACTGGAGAGAACTCATGATTTGCCGGGCCA...GGAGTCCCTTGCCCAGGCCAGCCACCCCAGGCCAGATTCCAAAACTAAGACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR GCA 90 bp | CCATTAACAGTGTATAGTCCCACGGTGGCTCTTAGCCCCTCATGCTCAGGTGGTAGGCTGTCCATGGGCTaGGACAGTGAGCCTTTCAAC | + |
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Preference number: 2 (lower is better) Translates to: PLTVYSPTVALSPSCSGGRLSMG*DSEPFN Trigger: GTTGAAAGGCTCACTGTCGCAGCCCATGGACAGCCT...ACCACCTGAGCATGAGGGGCTAAGAGCCACCGTGGGACTATACACTGTTAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR GCA 90 bp | CCATTAACAGTGTATAGTCCCACGGTGGCTCTTAGCCCCTCATGCTCAGGTGGTCAAGGAGGGATAGCTTaGTCTCCTCTGGCTCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: PLTVYSPTVALSPSCSGGQGGIA*SPLALG Trigger: GCCAAGAGCCAGAGGAGAGCAAGCTATCCCTCCTTG...ACCACCTGAGCATGAGGGGCTAAGAGCCACCGTGGGACTATACACTGTTAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGCCTCCCTCCCAAAGGGTTGGGCCCATTTCTTGTACAAACTAGCTGACCTCTATACCCCTGGTCAGTaGAGGAGAGCAGCAAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: FASLPKGWAHFLYKLADLYTPGQ*RRAARC Trigger: GCACCTTGCTGCTCTCCTTCACTGACCAGGGGTATA...GAGGTCAGCTAGTTTGTACAAGAAATGGGCCCAACCCTTTGGGAGGGAGGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGCCTCCCTCCCAAAGGGTTGGGCCCATTTCTTGTACAAACTAGCTGACCTCAGGCTGTCCATGGGCTaGGACAGTGAGCCTTTCAAC | + |
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Preference number: 2 (lower is better) Translates to: FASLPKGWAHFLYKLADLRLSMG*DSEPFN Trigger: GTTGAAAGGCTCACTGTCGCAGCCCATGGACAGCCT...GAGGTCAGCTAGTTTGTACAAGAAATGGGCCCAACCCTTTGGGAGGGAGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGCCTCCCTCCCAAAGGGTTGGGCCCATTTCTTGTACAAACTAGCTGACCTCCTAAACACTCCCAAGTaGAAGGCTGCCACACGGTAC | + |
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Preference number: 2 (lower is better) Translates to: FASLPKGWAHFLYKLADLLNTPK*KAATRY Trigger: GTACCGTGTGGCAGCCTTGCACTTGGGAGTGTTTAG...GAGGTCAGCTAGTTTGTACAAGAAATGGGCCCAACCCTTTGGGAGGGAGGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCTCCCTCCCAAAGGGTTGGGCCCATTTCTTGTACAAACTAGCTGACCTCCAGCTCAGGCCATCTTaGCAGCAGGAGAGTTGTATC | + |
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Preference number: 2 (lower is better) Translates to: FASLPKGWAHFLYKLADLQLRPS*QQESCI Trigger: GATACAACTCTCCTGCTGCCAAGATGGCCTGAGCTG...GAGGTCAGCTAGTTTGTACAAGAAATGGGCCCAACCCTTTGGGAGGGAGGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGGGCCAGTGCAGAAAGTGCATTTAAAAACCAGATGCCGCCTCTGCTAAACACTCAAAAACAGCCTTaGCCATGCCTGGTCGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: EGASAESAFKNQMPPLLNTQKQP*PCLVVE Trigger: TTCCACGACCAGGCATGGTCAAGGCTGTTTTTGAGT...GTTTAGCAGAGGCGGCATCTGGTTTTTAAATGCACTTTCTGCACTGGCCCCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGGGCCAGTGCAGAAAGTGCATTTAAAAACCAGATGCCGCCTCTGCTAAACACTGAGGACAGGCACTaGCACCCTCATACTCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: EGASAESAFKNQMPPLLNTEDRH*HPHTQK Trigger: TTTTTGAGTATGAGGGTGGCAGTGCCTGTCCTCAGT...GTTTAGCAGAGGCGGCATCTGGTTTTTAAATGCACTTTCTGCACTGGCCCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCCTCCGGGCTGGCCCCAACTGTCCTCTGCTGCCGAGGTAACGGGAGCCCTGGCAGCTCAGGCCATCTaGGCAGCAGGAGAGTTGTAT | + |
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Preference number: 3 (lower is better) Translates to: LPPGWPQLSSAAEVTGALAAQAI*AAGELY Trigger: ATACAACTCTCCTGCTGCCAAGATGGCCTGAGCTGC...CAGGGCTCCCGTTACCTCGGCAGCAGAGGACAGTTGGGGCCAGCCCGGAGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 72 bp | GGGCTTCTGAGGAAGAGCCAGCAGACAGCACCAGTCTaGTTGTCCCCCTCCTCTGACCCTGGCAGCTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: GLLRKSQQTAPV*LSPSSDPGSSG Trigger: GCCTGAGCTGCCAGGGTCAGAGGAGGGGGACAATCAGACTGGTGCTGTCTGCTGGCTCTTCCTCAGAAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR GCA 72 bp | CTCTTGGCCACCAGCTCCTCGAGGCTGTCCATGGGCTaGGACAGTGAGCCTTTCAACAGGTGGCCCGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: LLATSSSRLSMG*DSEPFNRWPGK Trigger: TTTGCCGGGCCACCTGTTGAAAGGCTCACTGTCGCAGCCCATGGACAGCCTCGAGGAGCTGGTGGCCAAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR CCA 72 bp | GGCCCAGAGGACAGAGCTACCTGCTGTCCTGGCCCTTaGGCTTCTGAGGAAGAGCCAGCAGACAGCACCAGT | + |
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Preference number: 3 (lower is better) Translates to: GPEDRATCCPGP*ASEEEPADSTS Trigger: ACTGGTGCTGTCTGCTGGCTCTTCCTCAGAAGCCCAAGGGCCAGGACAGCAGGTAGCTCTGTCCTCTGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAGACAGCACCAGTCTGATTGTCCCCCTCCTCTGACCCTGGCAGCTCAGGCCGCAAGGAGGGATAGCTaGCTCTCCTCTGGCTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: SRQHQSDCPPPLTLAAQAARRDS*LSSGSW Trigger: CCAAGAGCCAGAGGAGAGCAAGCTATCCCTCCTTGC...GGCCTGAGCTGCCAGGGTCAGAGGAGGGGGACAATCAGACTGGTGCTGTCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 72 bp | TGTGGCCAGCCATGTGCTGAGGTCCAGCCTCACCCTTaGGGGCAAGGAGGGATAGCTTGCTCTCCTCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: CGQPCAEVQPHP*GQGGIACSPLA Trigger: AGCCAGAGGAGAGCAAGCTATCCCTCCTTGCCCTCAAGGGTGAGGCTGGACCTCAGCACATGGCTGGCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 72 bp | CACCAGCTCCTCGAGGCTGTCCATGGGCTGCGACAGTaGGCCTTTCAACAGGTGGCCCGGCAAATCATGAGT | + |
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Preference number: 3 (lower is better) Translates to: HQLLEAVHGLRQ*AFQQVARQIMS Trigger: ACTCATGATTTGCCGGGCCACCTGTTGAAAGGCTCACTGTCGCAGCCCATGGACAGCCTCGAGGAGCTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR GCA 72 bp | ACAGTGTATAGTCCCACGGTGGCTCTTAGCCCCTCATaGTCAGGTGGTGTGGCCAGCCATGTGCTGAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: TVYSPTVALSPS*SGGVASHVLRS Trigger: GGACCTCAGCACATGGCTGGCCACACCACCTGAGCATGAGGGGCTAAGAGCCACCGTGGGACTATACACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 72 bp | GGACAGAGCTACCTGCTGTCCTGGCCCTTGGGCTTCTaGGGAAGAGCCAGCAGACAGCACCAGTCTGATTGT | + |
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Preference number: 3 (lower is better) Translates to: GQSYLLSWPLGF*GRASRQHQSDC Trigger: ACAATCAGACTGGTGCTGTCTGCTGGCTCTTCCTCAGAAGCCCAAGGGCCAGGACAGCAGGTAGCTCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR-3UTR CAA 90 bp | CCATTAACAGTGTATAGTCCCACGGTGGCTCTTAGCCCCTCATGCTCAGGTGGTGCAAGGAGGGATAGCTaGCTCTCCTCTGGCTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: PLTVYSPTVALSPSCSGGARRDS*LSSGSW Trigger: CCAAGAGCCAGAGGAGAGCAAGCTATCCCTCCTTGC...ACCACCTGAGCATGAGGGGCTAAGAGCCACCGTGGGACTATACACTGTTAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR CCA 72 bp | TTGTACAAACTAGCTGACCTCTGGGTGGTCATTTCCTaGGTCACAGAGTTGGGCTGGCTGTGCCACCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: LYKLADLWVVIS*VTELGWLCHLP Trigger: AGGGAGGTGGCACAGCCAGCCCAACTCTGTGACCCAGGAAATGACCACCCAGAGGTCAGCTAGTTTGTACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR CCA 72 bp | GGTTGGGCCCATTTCTTGTACAAACTAGCTGACCTCTaGGTGGTCATTTCCTGGGTCACAGAGTTGGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: GWAHFLYKLADL*VVISWVTELGW Trigger: CCAGCCCAACTCTGTGACCCAGGAAATGACCACCCAGAGGTCAGCTAGTTTGTACAAGAAATGGGCCCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 72 bp | GCTCAGGCCATCTTGGCAGCAGGAGAGTTGTATCACTaGGGACAGGCACTGCCACCCTCATACTCAAAAACA | + |
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Preference number: 3 (lower is better) Translates to: AQAILAAGELYH*GQALPPSYSKT Trigger: TGTTTTTGAGTATGAGGGTGGCAGTGCCTGTCCTCAGTGATACAACTCTCCTGCTGCCAAGATGGCCTGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR TCA 72 bp | AAACACTCCCAAGTGCAAGGCTGCCACACGGTACAGTaGAGTTTAGGACTCTTCCTGTGTCACTGTAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KHSQVQGCHTVQ*SLGLFLCHCRP Trigger: GGGCCTACAGTGACACAGGAAGAGTCCTAAACTTCACTGTACCGTGTGGCAGCCTTGCACTTGGGAGTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| 3UTR TCA 72 bp | AACATAATCTCCTTCATGCGTCATCGTGCCACTAACTaGGCCAGTTTTGCCTCCCTCCCAAAGGGTTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: NIISFMRHRATN*ASFASLPKGWA Trigger: GGCCCAACCCTTTGGGAGGGAGGCAAAACTGGCTCAGTTAGTGGCACGATGACGCATGAAGGAGATTATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| 3UTR TCA 72 bp | CCCAAAGGGTTGGGCCCATTTCTTGTACAAACTAGCTaGCCTCTGGGTGGTCATTTCCTGGGTCACAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PKGLGPFLVQTS*PLGGHFLGHRV Trigger: AACTCTGTGACCCAGGAAATGACCACCCAGAGGTCAGCTAGTTTGTACAAGAAATGGGCCCAACCCTTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| 3UTR TCA 72 bp | CCCTGGGAGGGGCCCCTTATCATTCTGCCACACATGTaGACAGTGGTTATTTACAAGGTCTGTTCCCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: PWEGPLIILPHM*TVVIYKVCSHK Trigger: TTTGTGGGAACAGACCTTGTAAATAACCACTGTTCACATGTGTGGCAGAATGATAAGGGGCCCCTCCCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| 3UTR TCA 72 bp | GACAGGCACTGCCACCCTCATACTCAAAAACAGCCTTaGCCATGCCTGGTCGTGGAATTAAAAATGGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: DRHCHPHTQKQP*PCLVVELKMGM Trigger: CATACCCATTTTTAATTCCACGACCAGGCATGGTCAAGGCTGTTTTTGAGTATGAGGGTGGCAGTGCCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| 3UTR CCA 72 bp | TGCCTGGTCGTGGAATTAAAAATGGGTATGTGTTGGTaGGGAGGGATAGAGGGAAGCCTCGTTTATACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: CLVVELKMGMCW*GGIEGSLVYTV Trigger: TACTGTATAAACGAGGCTTCCCTCTATCCCTCCCCACCAACACATACCCATTTTTAATTCCACGACCAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| 3UTR CCA 72 bp | TTTAATTGCATTTCAGCAGGGAGCCTCAGCACCGTGTaGGGAGATAGGAAAGTCTTAGTTTTGGAATCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FNCISAGSLSTV*GDRKVLVLESG Trigger: GCCAGATTCCAAAACTAAGACTTTCCTATCTCCCCACACGGTGCTGAGGCTCCCTGCTGAAATGCAATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCTCCGGGCTGGCCCCAACTGTCCTCTGCTGCCGAGGTAACGGGAGCCCTGGGGGCAGCATGGCCGTaGGTGTGCAGGGATAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPGWPQLSSAAEVTGALGAAWP*VCRDRS Trigger: ACTCCTATCCCTGCACACCCACGGCCATGCTGCCCC...CAGGGCTCCCGTTACCTCGGCAGCAGAGGACAGTTGGGGCCAGCCCGGAGGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR GCA 90 bp | TGGAATCTGGCCTGGGGTGGCTGGCCTGGGCAAGGGACTCCCCCTGCTGGAGCTATGATGGCCACCGCCTaGCTCTTGGTCTCCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WNLAWGGWPGQGTPPAGAMMATA*LLVSLG Trigger: CCCCAAGGAGACCAAGAGGCAGGCGGTGGCCATCAT...AGCTCCAGCAGGGGGAGTCCCTTGCCCAGGCCAGCCACCCCAGGCCAGATTCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCTCCGGGCTGGCCCCAACTGTCCTCTGCTGCCGAGGTAACGGGAGCCCTGGCTGGGGCCCCTTGCTaGAAGATTTCCGGAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LPPGWPQLSSAAEVTGALAGAPC*KISGTP Trigger: TGGTGTTCCGGAAATCTTCCAGCAAGGGGCCCCAGC...CAGGGCTCCCGTTACCTCGGCAGCAGAGGACAGTTGGGGCCAGCCCGGAGGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | TGGAATCTGGCCTGGGGTGGCTGGCCTGGGCAAGGGACTCCCCCTGCTGGAGCTTGTGCTGCTCGGCGATaGCCAGGGTGGCACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WNLAWGGWPGQGTPPAGACAARR*PGWHCE Trigger: TTCACAGTGCCACCCTGGCCATCGCCGAGCAGCACA...AGCTCCAGCAGGGGGAGTCCCTTGCCCAGGCCAGCCACCCCAGGCCAGATTCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGACAGCACCAGTCTGATTGTCCCCCTCCTCTGACCCTGGCAGCTCAGGCCAGGACCCGCTTGTGCTaGTCGGCGATGGCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRQHQSDCPPPLTLAAQARTRLC*SAMARV Trigger: CACCCTGGCCATCGCCGAGCAGCACAAGCGGGTCCT...GGCCTGAGCTGCCAGGGTCAGAGGAGGGGGACAATCAGACTGGTGCTGTCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCATGCTCAGGTGGTGTGGCCAGCCATGTGCTGAGGTCCAGCCTCACCCTTCGGCGATGGCCAGGGTaGCACTGTGAACCCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSCSGGVASHVLRSSLTLRRWPG*HCEPAG Trigger: ACCAGCGGGTTCACAGTGCCACCCTGGCCATCGCCG...AAGGGTGAGGCTGGACCTCAGCACATGGCTGGCCACACCACCTGAGCATGAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | TGGAATCTGGCCTGGGGTGGCTGGCCTGGGCAAGGGACTCCCCCTGCTGGAGCTACTGGGCAGGGGTCTTaGCCTCACTGCTATCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WNLAWGGWPGQGTPPAGATGQGS*PHCYPP Trigger: AGGAGGATAGCAGTGAGGCCAAGACCCCTGCCCAGT...AGCTCCAGCAGGGGGAGTCCCTTGCCCAGGCCAGCCACCCCAGGCCAGATTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | CAGCACCAGTCTGATTGTCCCCCTCCTCTGACCCTGGCAGCTCAGGCCATCTTGCCACCGCCTGCCTCTTaGTCTCCTTGGGGAGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QHQSDCPPPLTLAAQAILPPPAS*SPWGAV Trigger: CACGGCTCCCCAAGGAGACCAAGAGGCAGGCGGTGG...CAAGATGGCCTGAGCTGCCAGGGTCAGAGGAGGGGGACAATCAGACTGGTGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGTGGTGTGGCCAGCCATGTGCTGAGGTCCAGCCTCACCCTTGAGGGCAAGGCCGCTGGGGCCCCTTaGTGGAAGATTTCCGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SGGVASHVLRSSLTLEGKAAGAP*WKISGT Trigger: TGTTCCGGAAATCTTCCAGCAAGGGGCCCCAGCGGC...CTTGCCCTCAAGGGTGAGGCTGGACCTCAGCACATGGCTGGCCACACCACCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR GCA 90 bp | GGCTGTCCATGGGCTGCGACAGTGAGCCTTTCAACAGGTGGCCCGGCAAATCATAGCAGGACCCGCTTGTaGTGCTCGGCGATGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCPWAATVSLSTGGPANHSRTRL*CSAMAR Trigger: CCTGGCCATCGCCGAGCAGCACAAGCGGGTCCTGCT...ATGATTTGCCGGGCCACCTGTTGAAAGGCTCACTGTCGCAGCCCATGGACAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGACAGCACCAGTCTGATTGTCCCCCTCCTCTGACCCTGGCAGCTCAGGCCGGTCTGTTTCCGAGCTaGCCTGGGCTGCCCCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRQHQSDCPPPLTLAAQAGLFPS*PGLPHN Trigger: GTTATGGGGCAGCCCAGGCCAGCTCGGAAACAGACC...GGCCTGAGCTGCCAGGGTCAGAGGAGGGGGACAATCAGACTGGTGCTGTCTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCTGGCCTGGGCAAGGGACTCCCCCTGCTGGAGCTTTATACCCCTGGTCAGACTGGGCAGGGGTCTTaGCCTCACTGCTATCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VAGLGKGLPLLELYTPGQTGQGS*PHCYPP Trigger: AGGAGGATAGCAGTGAGGCCAAGACCCCTGCCCAGT...CTGACCAGGGGTATAAAGCTCCAGCAGGGGGAGTCCCTTGCCCAGGCCAGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCCACCAGCTCCTCGAGGCTGTCCATGGGCTGCGACAGTGAGCCTTTCAACGGTCTGTTTCCGAGCTaGCCTGGGCTGCCCCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: LATSSSRLSMGCDSEPFNGLFPS*PGLPHN Trigger: GTTATGGGGCAGCCCAGGCCAGCTCGGAAACAGACC...GTTGAAAGGCTCACTGTCGCAGCCCATGGACAGCCTCGAGGAGCTGGTGGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR TCA 90 bp | TGGAATCTGGCCTGGGGTGGCTGGCCTGGGCAAGGGACTCCCCCTGCTGGAGCTGCTTCAGCAATGTTCTaGGAACCTGTGATATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WNLAWGGWPGQGTPPAGAASAMF*EPVIWC Trigger: GCACCATATCACAGGTTCTCAGAACATTGCTGAAGC...AGCTCCAGCAGGGGGAGTCCCTTGCCCAGGCCAGCCACCCCAGGCCAGATTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR GCA 90 bp | CCCTCATGCTCAGGTGGTGTGGCCAGCCATGTGCTGAGGTCCAGCCTCACCCTTAGGAGTAGTGCTCGGTaGCCTTGTTCAGCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSCSGGVASHVLRSSLTLRSSAR*PCSAAS Trigger: TGAGGCTGCTGAACAAGGGCACCGAGCACTACTCCT...AAGGGTGAGGCTGGACCTCAGCACATGGCTGGCCACACCACCTGAGCATGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR GCA 90 bp | CAGCACCAGTCTGATTGTCCCCCTCCTCTGACCCTGGCAGCTCAGGCCATCTTGGGGTCTTGGCCTCACTaGTATCCTCCTGACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHQSDCPPPLTLAAQAILGSWPH*YPPDWA Trigger: AGCCCAGTCAGGAGGATAGCAGTGAGGCCAAGACCC...CAAGATGGCCTGAGCTGCCAGGGTCAGAGGAGGGGGACAATCAGACTGGTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | CCATTAACAGTGTATAGTCCCACGGTGGCTCTTAGCCCCTCATGCTCAGGTGGTCGCTGCGGGGCAGCATaGCCGTGGGTGTGCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLTVYSPTVALSPSCSGGRCGAA*PWVCRD Trigger: ATCCCTGCACACCCACGGCCATGCTGCCCCGCAGCG...ACCACCTGAGCATGAGGGGCTAAGAGCCACCGTGGGACTATACACTGTTAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCCACCAGCTCCTCGAGGCTGTCCATGGGCTGCGACAGTGAGCCTTTCAACTTCTGCCTCCAGCTCTaGGTCACAAGTGAAGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LATSSSRLSMGCDSEPFNFCLQL*VTSEGA Trigger: CGCACCTTCACTTGTGACTCAGAGCTGGAGGCAGAA...GTTGAAAGGCTCACTGTCGCAGCCCATGGACAGCCTCGAGGAGCTGGTGGCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR GCA 90 bp | TGGAATCTGGCCTGGGGTGGCTGGCCTGGGCAAGGGACTCCCCCTGCTGGAGCTAAATCCCGAGCTTCCTaGTCTTCATCTTCACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: WNLAWGGWPGQGTPPAGAKSRAS*SSSSHS Trigger: GCTATGTGAAGATGAAGAGCAGGAAGCTCGGGATTT...AGCTCCAGCAGGGGGAGTCCCTTGCCCAGGCCAGCCACCCCAGGCCAGATTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR GCA 90 bp | CCATTAACAGTGTATAGTCCCACGGTGGCTCTTAGCCCCTCATGCTCAGGTGGTAGGACCCGCTTGTGCTaGTCGGCGATGGCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLTVYSPTVALSPSCSGGRTRLC*SAMARV Trigger: CACCCTGGCCATCGCCGAGCAGCACAAGCGGGTCCT...ACCACCTGAGCATGAGGGGCTAAGAGCCACCGTGGGACTATACACTGTTAATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | CCATTAACAGTGTATAGTCCCACGGTGGCTCTTAGCCCCTCATGCTCAGGTGGTCCACCGCCTGCCTCTTaGTCTCCTTGGGGAGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLTVYSPTVALSPSCSGGPPPAS*SPWGAV Trigger: CACGGCTCCCCAAGGAGACCAAGAGGCAGGCGGTGG...ACCACCTGAGCATGAGGGGCTAAGAGCCACCGTGGGACTATACACTGTTAATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCCACCAGCTCCTCGAGGCTGTCCATGGGCTGCGACAGTGAGCCTTTCAACAGATGTTCTCGTGAGTaGTCTGCAGCTTGCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LATSSSRLSMGCDSEPFNRCSRE*SAACTP Trigger: GGGAGTGCAAGCTGCAGATCACTCACGAGAACATCT...GTTGAAAGGCTCACTGTCGCAGCCCATGGACAGCCTCGAGGAGCTGGTGGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR TCA 90 bp | CAGCACCAGTCTGATTGTCCCCCTCCTCTGACCCTGGCAGCTCAGGCCATCTTGTCACTGCTATCCTCCTaGCTGGGCTTTGGCTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QHQSDCPPPLTLAAQAILSLLSS*LGFGLS Trigger: GCTTAAGCCAAAGCCCAGTCAGGAGGATAGCAGTGA...CAAGATGGCCTGAGCTGCCAGGGTCAGAGGAGGGGGACAATCAGACTGGTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR GCA 90 bp | AAAGTCTTAGTTTTGGAATCTGGCCTGGGGTGGCTGGCCTGGGCAAGGGACTCCCGAGCTGGCCTGGGCTaGCCCATAACTTTCCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: KVLVLESGLGWLAWARDSRAGLG*PITFPI Trigger: TATGGGGAAAGTTATGGGGCAGCCCAGGCCAGCTCG...GGAGTCCCTTGCCCAGGCCAGCCACCCCAGGCCAGATTCCAAAACTAAGACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTCTTAGTTTTGGAATCTGGCCTGGGGTGGCTGGCCTGGGCAAGGGACTCCGCTGGGGCCCCTTGCTaGAAGATTTCCGGAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: KVLVLESGLGWLAWARDSAGAPC*KISGTP Trigger: TGGTGTTCCGGAAATCTTCCAGCAAGGGGCCCCAGC...GGAGTCCCTTGCCCAGGCCAGCCACCCCAGGCCAGATTCCAAAACTAAGACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTCTTAGTTTTGGAATCTGGCCTGGGGTGGCTGGCCTGGGCAAGGGACTCCCTCACACTGTACTCCTaGAGCCAGGAGGTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVLVLESGLGWLAWARDSLTLYS*SQEVRL Trigger: GAGCCTGACCTCCTGGCTCCAGGAGTACAGTGTGAG...GGAGTCCCTTGCCCAGGCCAGCCACCCCAGGCCAGATTCCAAAACTAAGACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | TTTGCCTCCCTCCCAAAGGGTTGGGCCCATTTCTTGTACAAACTAGCTGACCTCCGGCGATGGCCAGGGTaGCACTGTGAACCCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FASLPKGWAHFLYKLADLRRWPG*HCEPAG Trigger: ACCAGCGGGTTCACAGTGCCACCCTGGCCATCGCCG...GAGGTCAGCTAGTTTGTACAAGAAATGGGCCCAACCCTTTGGGAGGGAGGCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGGGCCAGTGCAGAAAGTGCATTTAAAAACCAGATGCCGCCTCTGCTAAACCGCTGCGGGGCAGCATaGCCGTGGGTGTGCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EGASAESAFKNQMPPLLNRCGAA*PWVCRD Trigger: ATCCCTGCACACCCACGGCCATGCTGCCCCGCAGCG...GTTTAGCAGAGGCGGCATCTGGTTTTTAAATGCACTTTCTGCACTGGCCCCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| 3UTR CAA 72 bp | CTCAGCACCGTGTGGGGAGATAGGAAAGTCTTAGTTTaGGAATCTGGCCTGGGGTGGCTGGCCTGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTVWGDRKVLV*ESGLGWLAWAR Trigger: CCTTGCCCAGGCCAGCCACCCCAGGCCAGATTCCAAAACTAAGACTTTCCTATCTCCCCACACGGTGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR TCA 90 bp | CCCTCATGCTCAGGTGGTGTGGCCAGCCATGTGCTGAGGTCCAGCCTCACCCTTGCTTCAGCAATGTTCTaGGAACCTGTGATATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSCSGGVASHVLRSSLTLASAMF*EPVIWC Trigger: GCACCATATCACAGGTTCTCAGAACATTGCTGAAGC...AAGGGTGAGGCTGGACCTCAGCACATGGCTGGCCACACCACCTGAGCATGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR TCA 90 bp | GGCTGTCCATGGGCTGCGACAGTGAGCCTTTCAACAGGTGGCCCGGCAAATCATTCACTGCTATCCTCCTaGCTGGGCTTTGGCTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GCPWAATVSLSTGGPANHSLLSS*LGFGLS Trigger: GCTTAAGCCAAAGCCCAGTCAGGAGGATAGCAGTGA...ATGATTTGCCGGGCCACCTGTTGAAAGGCTCACTGTCGCAGCCCATGGACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCTGGCCTGGGCAAGGGACTCCCCCTGCTGGAGCTTTATACCCCTGGTCAGAAATCCCGAGCTTCCTaGTCTTCATCTTCACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VAGLGKGLPLLELYTPGQKSRAS*SSSSHS Trigger: GCTATGTGAAGATGAAGAGCAGGAAGCTCGGGATTT...CTGACCAGGGGTATAAAGCTCCAGCAGGGGGAGTCCCTTGCCCAGGCCAGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR GCA 90 bp | CCATTAACAGTGTATAGTCCCACGGTGGCTCTTAGCCCCTCATGCTCAGGTGGTGCCGCTGGGGCCCCTTaGTGGAAGATTTCCGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PLTVYSPTVALSPSCSGGAAGAP*WKISGT Trigger: TGTTCCGGAAATCTTCCAGCAAGGGGCCCCAGCGGC...ACCACCTGAGCATGAGGGGCTAAGAGCCACCGTGGGACTATACACTGTTAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGGGCCAGTGCAGAAAGTGCATTTAAAAACCAGATGCCGCCTCTGCTAAACAGCAGGACCCGCTTGTaGTGCTCGGCGATGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGASAESAFKNQMPPLLNSRTRL*CSAMAR Trigger: CCTGGCCATCGCCGAGCAGCACAAGCGGGTCCTGCT...GTTTAGCAGAGGCGGCATCTGGTTTTTAAATGCACTTTCTGCACTGGCCCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CCA 90 bp | CCATTAACAGTGTATAGTCCCACGGTGGCTCTTAGCCCCTCATGCTCAGGTGGTTGTGCTGCTCGGCGATaGCCAGGGTGGCACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLTVYSPTVALSPSCSGGCAARR*PGWHCE Trigger: TTCACAGTGCCACCCTGGCCATCGCCGAGCAGCACA...ACCACCTGAGCATGAGGGGCTAAGAGCCACCGTGGGACTATACACTGTTAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR TCA 90 bp | AAAGTCTTAGTTTTGGAATCTGGCCTGGGGTGGCTGGCCTGGGCAAGGGACTCCTGTTCTGAGAACCTGTaGTATGGTGCCAGTACGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KVLVLESGLGWLAWARDSCSENL*YGASTR Trigger: GCGCGTACTGGCACCATATCACAGGTTCTCAGAACA...GGAGTCCCTTGCCCAGGCCAGCCACCCCAGGCCAGATTCCAAAACTAAGACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR GCA 90 bp | CCATTAACAGTGTATAGTCCCACGGTGGCTCTTAGCCCCTCATGCTCAGGTGGTAGGAGTAGTGCTCGGTaGCCTTGTTCAGCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLTVYSPTVALSPSCSGGRSSAR*PCSAAS Trigger: TGAGGCTGCTGAACAAGGGCACCGAGCACTACTCCT...ACCACCTGAGCATGAGGGGCTAAGAGCCACCGTGGGACTATACACTGTTAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR GCA 90 bp | TTTGCCTCCCTCCCAAAGGGTTGGGCCCATTTCTTGTACAAACTAGCTGACCTCGGGTCTTGGCCTCACTaGTATCCTCCTGACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FASLPKGWAHFLYKLADLGSWPH*YPPDWA Trigger: AGCCCAGTCAGGAGGATAGCAGTGAGGCCAAGACCC...GAGGTCAGCTAGTTTGTACAAGAAATGGGCCCAACCCTTTGGGAGGGAGGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS-3UTR TCA 90 bp | GAAGGGGCCAGTGCAGAAAGTGCATTTAAAAACCAGATGCCGCCTCTGCTAAACTTCTGCCTCCAGCTCTaGGTCACAAGTGAAGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: EGASAESAFKNQMPPLLNFCLQL*VTSEGA Trigger: CGCACCTTCACTTGTGACTCAGAGCTGGAGGCAGAA...GTTTAGCAGAGGCGGCATCTGGTTTTTAAATGCACTTTCTGCACTGGCCCCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS-3UTR TCA 90 bp | TTTGCCTCCCTCCCAAAGGGTTGGGCCCATTTCTTGTACAAACTAGCTGACCTCAGATGTTCTCGTGAGTaGTCTGCAGCTTGCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FASLPKGWAHFLYKLADLRCSRE*SAACTP Trigger: GGGAGTGCAAGCTGCAGATCACTCACGAGAACATCT...GAGGTCAGCTAGTTTGTACAAGAAATGGGCCCAACCCTTTGGGAGGGAGGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS-3UTR CCA 90 bp | CCACCCTCATACTCAAAAACAGCCTTGACCATGCCTGGTCGTGGAATTAAAAATGGGGCAGCATGGCCGTaGGTGTGCAGGGATAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPSYSKTALTMPGRGIKNGAAWP*VCRDRS Trigger: ACTCCTATCCCTGCACACCCACGGCCATGCTGCCCC...ATTTTTAATTCCACGACCAGGCATGGTCAAGGCTGTTTTTGAGTATGAGGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR CAA 72 bp | AGTTTTGCCTCCCTCCCAAAGGGTTGGGCCCATTTCTaGTACAAACTAGCTGACCTCTGGGTGGTCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFASLPKGWAHF*YKLADLWVVIS Trigger: GGAAATGACCACCCAGAGGTCAGCTAGTTTGTACAAGAAATGGGCCCAACCCTTTGGGAGGGAGGCAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS-3UTR GCA 90 bp | CCACCCTCATACTCAAAAACAGCCTTGACCATGCCTGGTCGTGGAATTAAAAATCGAGCTGGCCTGGGCTaGCCCATAACTTTCCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: PPSYSKTALTMPGRGIKNRAGLG*PITFPI Trigger: TATGGGGAAAGTTATGGGGCAGCCCAGGCCAGCTCG...ATTTTTAATTCCACGACCAGGCATGGTCAAGGCTGTTTTTGAGTATGAGGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| 3UTR CAA 72 bp | ACCATGCCTGGTCGTGGAATTAAAAATGGGTATGTGTaGGTGGGGAGGGATAGAGGGAAGCCTCGTTTATAC | + |
|
Preference number: 4 (lower is better) Translates to: TMPGRGIKNGYV*VGRDRGKPRLY Trigger: GTATAAACGAGGCTTCCCTCTATCCCTCCCCACCAACACATACCCATTTTTAATTCCACGACCAGGCATGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS-3UTR CAA 90 bp | GTGGCTGGCCTGGGCAAGGGACTCCCCCTGCTGGAGCTTTATACCCCTGGTCAGGCCACCGCCTGCCTCTaGGTCTCCTTGGGGAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VAGLGKGLPLLELYTPGQATACL*VSLGSR Trigger: ACGGCTCCCCAAGGAGACCAAGAGGCAGGCGGTGGC...CTGACCAGGGGTATAAAGCTCCAGCAGGGGGAGTCCCTTGCCCAGGCCAGCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGTGGTGTGGCCAGCCATGTGCTGAGGTCCAGCCTCACCCTTGAGGGCAAGTCCAGCAGGACCCGCTaGTGCTGCTCGGCGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGGVASHVLRSSLTLEGKSSRTR*CCSAMA Trigger: GGCCATCGCCGAGCAGCACAAGCGGGTCCTGCTGGA...CTTGCCCTCAAGGGTGAGGCTGGACCTCAGCACATGGCTGGCCACACCACCTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCATGCTCAGGTGGTGTGGCCAGCCATGTGCTGAGGTCCAGCCTCACCCTTAGCCGCTGGGGCCCCTaGCTGGAAGATTTCCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSCSGGVASHVLRSSLTLSRWGP*LEDFRN Trigger: GTTCCGGAAATCTTCCAGCAAGGGGCCCCAGCGGCT...AAGGGTGAGGCTGGACCTCAGCACATGGCTGGCCACACCACCTGAGCATGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTCTTAGTTTTGGAATCTGGCCTGGGGTGGCTGGCCTGGGCAAGGGACTCCGCCACCGCCTGCCTCTaGGTCTCCTTGGGGAGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: KVLVLESGLGWLAWARDSATACL*VSLGSR Trigger: ACGGCTCCCCAAGGAGACCAAGAGGCAGGCGGTGGC...GGAGTCCCTTGCCCAGGCCAGCCACCCCAGGCCAGATTCCAAAACTAAGACTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCTGGCCTGGGCAAGGGACTCCCCCTGCTGGAGCTTTATACCCCTGGTCAGCCATACACGTCCAGGTaGGGGCAGGGTAACAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VAGLGKGLPLLELYTPGQPYTSR*GQGNRK Trigger: CTTCCTGTTACCCTGCCCCAACCTGGACGTGTATGG...CTGACCAGGGGTATAAAGCTCCAGCAGGGGGAGTCCCTTGCCCAGGCCAGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS CCA 90 bp | CCTCGGAGGCACACGGACTTCTCATCAGGATACTTCTCCAGCCGCTaGGGCCCCTTGCTGGAAGATTTCCGGAACACCAGCCAGCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: PRRHTDFSSGYFSSR*GPLLEDFRNTSQHL Trigger: GAGGTGCTGGCTGGTGTTCCGGAAATCTTCCAGCAAGGGGCCCCAGCGGCTGGAGAAGTATCCTGATGAGAAGTCCGTGTGCCTCCGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS CCA 90 bp | CATTCTTCTCCATCTCCAGCAGGACCCGCTTGTGCTGCTCGGCGATaGCCAGGGTGGCACTGTGAACCCGCTGGTAAATCTGCTCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: HSSPSPAGPACAARR*PGWHCEPAGKSAPP Trigger: AGGGGGAGCAGATTTACCAGCGGGTTCACAGTGCCACCCTGGCCATCGCCGAGCAGCACAAGCGGGTCCTGCTGGAGATGGAGAAGAATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGTCCATGGGCTGCGACAGTGAGCCTTTCAACAGGTGGCCCGGCAAATCATAGCCGCTGGGGCCCCTaGCTGGAAGATTTCCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GCPWAATVSLSTGGPANHSRWGP*LEDFRN Trigger: GTTCCGGAAATCTTCCAGCAAGGGGCCCCAGCGGCT...ATGATTTGCCGGGCCACCTGTTGAAAGGCTCACTGTCGCAGCCCATGGACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCTCCGGGCTGGCCCCAACTGTCCTCTGCTGCCGAGGTAACGGGAGCCCTGCATCTTCACATAGCCTaGCTTGACGATGTCGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LPPGWPQLSSAAEVTGALHLHIA*LDDVVE Trigger: TTCAACGACATCGTCAAGCAAGGCTATGTGAAGATG...CAGGGCTCCCGTTACCTCGGCAGCAGAGGACAGTTGGGGCCAGCCCGGAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGTGGTGTGGCCAGCCATGTGCTGAGGTCCAGCCTCACCCTTGAGGGCAAGCCCAGGCTGATGTCATaGAGCCGTGATCCCAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: SGGVASHVLRSSLTLEGKPRLMS*SRDPRH Trigger: ATGTCTGGGATCACGGCTCAATGACATCAGCCTGGG...CTTGCCCTCAAGGGTGAGGCTGGACCTCAGCACATGGCTGGCCACACCACCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CAA 90 bp | TTGGCCACCAGCTCCTCGAGGCTGTCCATGGGCTGCGACAGTGAGCCTTTCAACCCATACACGTCCAGGTaGGGGCAGGGTAACAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LATSSSRLSMGCDSEPFNPYTSR*GQGNRK Trigger: CTTCCTGTTACCCTGCCCCAACCTGGACGTGTATGG...GTTGAAAGGCTCACTGTCGCAGCCCATGGACAGCCTCGAGGAGCTGGTGGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS CCA 90 bp | CGGACTTCTCATCAGGATACTTCTCCAGCCGCTGGGGCCCCTTGCTaGAAGATTTCCGGAACACCAGCCAGCACCTCCGGTAAATCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RTSHQDTSPAAGAPC*KISGTPASTSGKSR Trigger: TCGGGATTTACCGGAGGTGCTGGCTGGTGTTCCGGAAATCTTCCAGCAAGGGGCCCCAGCGGCTGGAGAAGTATCCTGATGAGAAGTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS-3UTR CAA 90 bp | TTTGCCTCCCTCCCAAAGGGTTGGGCCCATTTCTTGTACAAACTAGCTGACCTCTCCAGCAGGACCCGCTaGTGCTGCTCGGCGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FASLPKGWAHFLYKLADLSSRTR*CCSAMA Trigger: GGCCATCGCCGAGCAGCACAAGCGGGTCCTGCTGGA...GAGGTCAGCTAGTTTGTACAAGAAATGGGCCCAACCCTTTGGGAGGGAGGCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS GCA 90 bp | ACACGGACTTCTCATCAGGATACTTCTCCAGCCGCTGGGGCCCCTTaGTGGAAGATTTCCGGAACACCAGCCAGCACCTCCGGTAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: TRTSHQDTSPAAGAP*WKISGTPASTSGKS Trigger: GGATTTACCGGAGGTGCTGGCTGGTGTTCCGGAAATCTTCCAGCAAGGGGCCCCAGCGGCTGGAGAAGTATCCTGATGAGAAGTCCGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS TCA 90 bp | ACTCCCCATACACGTCCAGGTTGGGGCAGGGTAACAGGAAGACGTTaGAGCGATCTGTCTGCTCACACTGTACTCCTGGAGCCAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TPHTRPGWGRVTGRR*SDLSAHTVLLEPGG Trigger: ACCTCCTGGCTCCAGGAGTACAGTGTGAGCAGACAGATCGCTTCAACGTCTTCCTGTTACCCTGCCCCAACCTGGACGTGTATGGGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS-3UTR CAA 90 bp | AGCAGACAGCACCAGTCTGATTGTCCCCCTCCTCTGACCCTGGCAGCTCAGGCCGTGACACACTTGACGTaGCTAATCTCAGTCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRQHQSDCPPPLTLAAQAVTHLT*LISVTL Trigger: CAAGGTGACTGAGATTAGCAACGTCAAGTGTGTCAC...GGCCTGAGCTGCCAGGGTCAGAGGAGGGGGACAATCAGACTGGTGCTGTCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS-3UTR CAA 90 bp | TTGGCCACCAGCTCCTCGAGGCTGTCCATGGGCTGCGACAGTGAGCCTTTCAACCATCTTCACATAGCCTaGCTTGACGATGTCGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LATSSSRLSMGCDSEPFNHLHIA*LDDVVE Trigger: TTCAACGACATCGTCAAGCAAGGCTATGTGAAGATG...GTTGAAAGGCTCACTGTCGCAGCCCATGGACAGCCTCGAGGAGCTGGTGGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS-3UTR CAA 90 bp | CCACCCTCATACTCAAAAACAGCCTTGACCATGCCTGGTCGTGGAATTAAAAATCCCAGGCTGATGTCATaGAGCCGTGATCCCAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: PPSYSKTALTMPGRGIKNPRLMS*SRDPRH Trigger: ATGTCTGGGATCACGGCTCAATGACATCAGCCTGGG...ATTTTTAATTCCACGACCAGGCATGGTCAAGGCTGTTTTTGAGTATGAGGGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS CCA 72 bp | TATGGTGCCAGTACGCGCTGCGGGGCAGCATGGCCGTaGGTGTGCAGGGATAGGAGTAGTGCTCGGTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: YGASTRCGAAWP*VCRDRSSARCP Trigger: AGGGCACCGAGCACTACTCCTATCCCTGCACACCCACGGCCATGCTGCCCCGCAGCGCGTACTGGCACCATA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS CAA 90 bp | GCCACCGCCTGCCTCTTGGTCTCCTTGGGGAGCCGTGTGACACACTaGACGTTGCTAATCTCAGTCACCTTGGGGCAGCCTCGGAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ATACLLVSLGSRVTH*TLLISVTLGQPRRH Trigger: GTGCCTCCGAGGCTGCCCCAAGGTGACTGAGATTAGCAACGTCAAGTGTGTCACACGGCTCCCCAAGGAGACCAAGAGGCAGGCGGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS CCA 72 bp | CCATCTCCAGCAGGACCCGCTTGTGCTGCTCGGCGATaGCCAGGGTGGCACTGTGAACCCGCTGGTAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: PSPAGPACAARR*PGWHCEPAGKS Trigger: AGATTTACCAGCGGGTTCACAGTGCCACCCTGGCCATCGCCGAGCAGCACAAGCGGGTCCTGCTGGAGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS GCA 72 bp | TCTCATCAGGATACTTCTCCAGCCGCTGGGGCCCCTTaGTGGAAGATTTCCGGAACACCAGCCAGCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SHQDTSPAAGAP*WKISGTPASTS Trigger: GGAGGTGCTGGCTGGTGTTCCGGAAATCTTCCAGCAAGGGGCCCCAGCGGCTGGAGAAGTATCCTGATGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS GCA 72 bp | CCTGTTCAGGAGGTCTGTTTCCGAGCTGGCCTGGGCTaGCCCATAACTTTCCCCATAGCTGGAGGCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PVQEVCFRAGLG*PITFPIAGGFS Trigger: GCTGAAGCCTCCAGCTATGGGGAAAGTTATGGGGCAGCCCAGGCCAGCTCGGAAACAGACCTCCTGAACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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| CDS CAA 90 bp | CACTCCCCATACACGTCCAGGTTGGGGCAGGGTAACAGGAAGACGTaGAAGCGATCTGTCTGCTCACACTGTACTCCTGGAGCCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HSPYTSRLGQGNRKT*KRSVCSHCTPGARR Trigger: CCTCCTGGCTCCAGGAGTACAGTGTGAGCAGACAGATCGCTTCAACGTCTTCCTGTTACCCTGCCCCAACCTGGACGTGTATGGGGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS CCA 72 bp | CACACGGACTTCTCATCAGGATACTTCTCCAGCCGCTaGGGCCCCTTGCTGGAAGATTTCCGGAACACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HTDFSSGYFSSR*GPLLEDFRNTS Trigger: GCTGGTGTTCCGGAAATCTTCCAGCAAGGGGCCCCAGCGGCTGGAGAAGTATCCTGATGAGAAGTCCGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS CAA 72 bp | TTCTCATCAGGATACTTCTCCAGCCGCTGGGGCCCCTaGCTGGAAGATTTCCGGAACACCAGCCAGCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: FSSGYFSSRWGP*LEDFRNTSQHL Trigger: GAGGTGCTGGCTGGTGTTCCGGAAATCTTCCAGCAAGGGGCCCCAGCGGCTGGAGAAGTATCCTGATGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS CAA 72 bp | TTGGTCTCCTTGGGGAGCCGTGTGACACACTTGACGTaGCTAATCTCAGTCACCTTGGGGCAGCCTCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LVSLGSRVTHLT*LISVTLGQPRR Trigger: CCTCCGAGGCTGCCCCAAGGTGACTGAGATTAGCAACGTCAAGTGTGTCACACGGCTCCCCAAGGAGACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS CAA 72 bp | TGCCTCTTGGTCTCCTTGGGGAGCCGTGTGACACACTaGACGTTGCTAATCTCAGTCACCTTGGGGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CLLVSLGSRVTH*TLLISVTLGQP Trigger: AGGCTGCCCCAAGGTGACTGAGATTAGCAACGTCAAGTGTGTCACACGGCTCCCCAAGGAGACCAAGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS TCA 72 bp | ACACGTCCAGGTTGGGGCAGGGTAACAGGAAGACGTTaGAGCGATCTGTCTGCTCACACTGTACTCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TRPGWGRVTGRR*SDLSAHTVLLE Trigger: CTCCAGGAGTACAGTGTGAGCAGACAGATCGCTTCAACGTCTTCCTGTTACCCTGCCCCAACCTGGACGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS CAA 72 bp | GTGATCTGCAGCTTGCACTCCCCATACACGTCCAGGTaGGGGCAGGGTAACAGGAAGACGTTGAAGCGATCT | + |
|
Preference number: 6 (lower is better) Translates to: VICSLHSPYTSR*GQGNRKTLKRS Trigger: AGATCGCTTCAACGTCTTCCTGTTACCCTGCCCCAACCTGGACGTGTATGGGGAGTGCAAGCTGCAGATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS CAA 72 bp | TACACGTCCAGGTTGGGGCAGGGTAACAGGAAGACGTaGAAGCGATCTGTCTGCTCACACTGTACTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: YTSRLGQGNRKT*KRSVCSHCTPG Trigger: TCCAGGAGTACAGTGTGAGCAGACAGATCGCTTCAACGTCTTCCTGTTACCCTGCCCCAACCTGGACGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS TCA 72 bp | GGTTGTGTATGTCCCAGAGGTAGATGTTCTCGTGAGTaGTCTGCAGCTTGCACTCCCCATACACGTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GCVCPRGRCSRE*SAACTPHTRPG Trigger: ACCTGGACGTGTATGGGGAGTGCAAGCTGCAGATCACTCACGAGAACATCTACCTCTGGGACATACACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
||
| CDS CAA 72 bp | TTGAGCCGTGATCCCAGACATTCCACGGACAGTGTCTaGTACCACTCTTCTGCCTCCAGCTCTGAGTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: LSRDPRHSTDSV*YHSSASSSESQ Trigger: TTGTGACTCAGAGCTGGAGGCAGAAGAGTGGTACAAGACACTGTCCGTGGAATGTCTGGGATCACGGCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046461.9 ENSMUST00000212810.2 |
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