Pregenerated sensors for DOK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035711Ensembl transcript IDs: ENSMUST00000047877.5, ENSMUST00000223563.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCACCTaGCTTGTCCCTGCAGGTCAGAGTAGACGGGTTATGTTCGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: LREEVGQSVAPPRAT*LVPAGQSRRVMFEV Trigger: AACTTCGAACATAACCCGTCTACTCTGACCTGCAGGGACAAGCCAGGTGGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCACCTGGCTTGTCCCTGTTCGAAGTTGTTCCTaGTCTTGGGTGATCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: REEVGQSVAPPRATWLVPVRSCS*SWVITS Trigger: AGAGGTGATCACCCAAGACCAGGAACAACTTCGAAC...AGGGACAAGCCAGGTGGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGTTCCTGGTCTTGGGTaGTCACCTCTGTCCTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: FNLYSLREEVGQSVAPPRVPGLG*SPLSCS Trigger: ACTGCAGGACAGAGGTGATCACCCAAGACCAGGAAC...CCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGTTCCTGGTCTTGGGTaGTCACCTCTGTCCTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: VQSVQSEGGGRAECGSSPVPGLG*SPLSCS Trigger: ACTGCAGGACAGAGGTGATCACCCAAGACCAGGAAC...CGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| 3UTR-3UTR CCA 90 bp | AATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCGTTCGAAGTTGTTCCTaGTCTTGGGTGATCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: NLYSLREEVGQSVAPPRAVRSCS*SWVITS Trigger: AGAGGTGATCACCCAAGACCAGGAACAACTTCGAAC...GGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| 3UTR CCA 72 bp | GAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCACCTaGCTTGTCCCTGCAGGTCAGAGTAGACGGGTTATG | + |
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Preference number: 3 (lower is better) Translates to: EVGQSVAPPRAT*LVPAGQSRRVM Trigger: CATAACCCGTCTACTCTGACCTGCAGGGACAAGCCAGGTGGCCCGGGGAGGAGCCACACTCTGCCCTACCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCACCTGGCTTGTCCCTGGGTTATGTTCGAAGTaGTTCCTGGTCTTGGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: REEVGQSVAPPRATWLVPGLCSK*FLVLGD Trigger: ATCACCCAAGACCAGGAACAACTTCGAACATAACCC...AGGGACAAGCCAGGTGGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| 3UTR-3UTR CAA 90 bp | AATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCGGGTTATGTTCGAAGTaGTTCCTGGTCTTGGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: NLYSLREEVGQSVAPPRAGLCSK*FLVLGD Trigger: ATCACCCAAGACCAGGAACAACTTCGAACATAACCC...GGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| 3UTR TCA 72 bp | AGACGGGTTATGTTCGAAGTTGTTCCTGGTCTTGGGTaGTCACCTCTGTCCTGCAGTGGCTGGCCGCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: RRVMFEVVPGLG*SPLSCSGWPLR Trigger: CCTGAGCGGCCAGCCACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGAACATAACCCGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | CAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCACCTGGCTGCTGGCAGCGGGAGGTaGCCTCTGTCCTCTGCACGA | + |
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Preference number: 4 (lower is better) Translates to: QSEGGGRAECGSSPGHLAAGSGR*PLSSAR Trigger: TCGTGCAGAGGACAGAGGCCACCTCCCGCTGCCAGC...AGCCAGGTGGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | GAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCACCTGGCTTGTCCCGGCAGGGTGGGGACATaGCCAGCTCTGGAAGACGCT | + |
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Preference number: 4 (lower is better) Translates to: EGGGRAECGSSPGHLACPGRVGT*PALEDA Trigger: AGCGTCTTCCAGAGCTGGCCATGTCCCCACCCTGCC...GGGACAAGCCAGGTGGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | AGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCACCTGGCTTGTCCCTAGGCACCAGTGTCCCTaGGACAGCTCTCGCCATCCG | + |
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Preference number: 4 (lower is better) Translates to: REEVGQSVAPPRATWLVPRHQCP*DSSRHP Trigger: CGGATGGCGAGAGCTGTCCCAGGGACACTGGTGCCT...AGGGACAAGCCAGGTGGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | CTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCACCAGGCACCAGTGTCCCTaGGACAGCTCTCGCCATCCG | + |
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Preference number: 4 (lower is better) Translates to: LYSLREEVGQSVAPPRATRHQCP*DSSRHP Trigger: CGGATGGCGAGAGCTGTCCCAGGGACACTGGTGCCT...GGTGGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | CTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCACCCTTCAGGACCCCCATTaGTCAGCCCAGGGCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LYSLREEVGQSVAPPRATLQDPH*SAQGWP Trigger: AGGCCAGCCCTGGGCTGACCAATGGGGGTCCTGAAG...GGTGGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR GCA 90 bp | GAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCACCTGGCTTGTCCCGGCTGGCCTCCAGCATaGACACGTTCTCATAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: EGGGRAECGSSPGHLACPGWPPA*TRSHRD Trigger: ATCTCTATGAGAACGTGTGCATGCTGGAGGCCAGCC...GGGACAAGCCAGGTGGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | CAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCACCTGGCTCAGCTAAAACAGGCCTaGGGCTTGGATGTCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: QSEGGGRAECGSSPGHLAQLKQA*GLDVSL Trigger: GAGGGAGACATCCAAGCCCCAGGCCTGTTTTAGCTG...AGCCAGGTGGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | TTCAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGAGGCAGGGGGCAGGGTaGGGACATGGCCAGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FNLYSLREEVGQSVAPPRRQGAG*GHGQLW Trigger: CCAGAGCTGGCCATGTCCCCACCCTGCCCCCTGCCT...CCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR GCA 90 bp | TGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGTGGCTGGCCGCTCAGGCCTCCGCCGTGCCTGTGTaGTTGCTGGTCTGCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: CSWSWVITSVLQWLAAQASAVPV*LLVCLH Trigger: GTGCAAGCAGACCAGCAAGCACACAGGCACGGCGGA...GGCCTGAGCGGCCAGCCACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR GCA 90 bp | CAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCACCTGGCTGGCTGGCCTCCAGCATaGACACGTTCTCATAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: QSEGGGRAECGSSPGHLAGWPPA*TRSHRD Trigger: ATCTCTATGAGAACGTGTGCATGCTGGAGGCCAGCC...AGCCAGGTGGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | TTCAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGGACCTGTCGCCTGCTaGTCCCAGGCCACCATCACG | + |
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Preference number: 4 (lower is better) Translates to: FNLYSLREEVGQSVAPPRGPVAC*SQATIT Trigger: CGTGATGGTGGCCTGGGACCAGCAGGCGACAGGTCC...CCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | GTTCAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGCTGGCAGCGGGAGGTaGCCTCTGTCCTCTGCACGA | + |
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Preference number: 4 (lower is better) Translates to: VQSVQSEGGGRAECGSSPAGSGR*PLSSAR Trigger: TCGTGCAGAGGACAGAGGCCACCTCCCGCTGCCAGC...CGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | TCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCACCTGGCTTGTAACAGGCCTGGGGCTTaGATGTCTCCCTCAGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: SEGGGRAECGSSPGHLACNRPGA*MSPSVG Trigger: TCCAACTGAGGGAGACATCCAAGCCCCAGGCCTGTT...ACAAGCCAGGTGGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR TCA 90 bp | GTTCAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGAAAAAGGCCCTCACCTaGGTCACAGCGGCGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VQSVQSEGGGRAECGSSPKKALT*VTAAAS Trigger: GCTGGCCGCCGCTGTGACTCAGGTGAGGGCCTTTTT...CGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | CGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGTGGCTGGCCGCTTGGTCAGCCCAGGGCTaGCCTCCAGCATGCACACGT | + |
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Preference number: 4 (lower is better) Translates to: RSCSWSWVITSVLQWLAAWSAQG*PPACTR Trigger: ACGTGTGCATGCTGGAGGCCAGCCCTGGGCTGACCA...AGCGGCCAGCCACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | CGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGTGGCTGGCCGCTTCCAGATTGCTGTCCTaGGCCGAGCCCGGCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: RSCSWSWVITSVLQWLAASRLLS*AEPGQL Trigger: GAGTTGGCCGGGCTCGGCCCAGGACAGCAATCTGGA...AGCGGCCAGCCACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | CAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCAGCAGCCTCCGGTACTaGGCTTCCAGATTGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: QSVQSEGGGRAECGSSPGSSLRY*ASRLLS Trigger: GGACAGCAATCTGGAAGCCCAGTACCGGAGGCTGCT...GCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | CGGGCCACCTGGCTTGTCCCTGCAGGTCAGAGTAGACGGGTTATGTTCGAAGTTGGCAGGGTGGGGACATaGCCAGCTCTGGAAGACGCT | + |
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Preference number: 4 (lower is better) Translates to: RATWLVPAGQSRRVMFEVGRVGT*PALEDA Trigger: AGCGTCTTCCAGAGCTGGCCATGTCCCCACCCTGCC...AACTTCGAACATAACCCGTCTACTCTGACCTGCAGGGACAAGCCAGGTGGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR GCA 90 bp | CTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCACCTGCGCCAGCATTTCTTaGCAAACTTTACGTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LYSLREEVGQSVAPPRATCASIS*QTLRAA Trigger: AGCAGCACGTAAAGTTTGGCAAGAAATGCTGGCGCA...GGTGGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | TTCAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGTGCCTGTGTGCTTGCTaGTCTGCTTGCACACGGACG | + |
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Preference number: 4 (lower is better) Translates to: FNLYSLREEVGQSVAPPRCLCAC*SACTRT Trigger: CGTCCGTGTGCAAGCAGACCAGCAAGCACACAGGCA...CCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | GTTCAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGTGCCTGTGTGCTTGCTaGTCTGCTTGCACACGGACG | + |
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Preference number: 4 (lower is better) Translates to: VQSVQSEGGGRAECGSSPCLCAC*SACTRT Trigger: CGTCCGTGTGCAAGCAGACCAGCAAGCACACAGGCA...CGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | TCGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGTGGCTGGCCGCCAGCTAAAACAGGCCTaGGGCTTGGATGTCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SKLFLVLGDHLCPAVAGRQLKQA*GLDVSL Trigger: GAGGGAGACATCCAAGCCCCAGGCCTGTTTTAGCTG...GCGGCCAGCCACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | AATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCTTAGAGGCAGCTTTCTaGGAGTGGGCAGCTCAAATC | + |
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Preference number: 4 (lower is better) Translates to: NLYSLREEVGQSVAPPRALEAAF*EWAAQI Trigger: GATTTGAGCTGCCCACTCCCAGAAAGCTGCCTCTAA...GGCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR GCA 90 bp | CAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCTGCGCCAGCATTTCTTaGCAAACTTTACGTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QSVQSEGGGRAECGSSPGCASIS*QTLRAA Trigger: AGCAGCACGTAAAGTTTGGCAAGAAATGCTGGCGCA...GCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | AGGCAAGCTTTATTACTGTTCAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGGCAGGGGGCAGGGTaGGGACATGGCCAGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RQALLLFNLYSLREEVGQRQGAG*GHGQLW Trigger: CCAGAGCTGGCCATGTCCCCACCCTGCCCCCTGCCT...CTGCCCTACCTCCTCCCTCAGACTGTACAGATTGAACAGTAATAAAGCTTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | TATGTTCGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGTGGCTGGGGCAGCTCAAATCCTaGGGCCACCTCCCGAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: YVRSCSWSWVITSVLQWLGQLKS*GHLPKL Trigger: GAGCTTCGGGAGGTGGCCCCAGGATTTGAGCTGCCC...CAGCCACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGAACATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR TCA 90 bp | GTAGACGGGTTATGTTCGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTAAAAAGGCCCTCACCTaGGTCACAGCGGCGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VDGLCSKLFLVLGDHLCPKKALT*VTAAAS Trigger: GCTGGCCGCCGCTGTGACTCAGGTGAGGGCCTTTTT...AGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGAACATAACCCGTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR GCA 90 bp | GGGCCACCTGGCTTGTCCCTGCAGGTCAGAGTAGACGGGTTATGTTCGAAGTTGGCAGAGCCCACACTTTaGGCCAGCATTTCTTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: GPPGLSLQVRVDGLCSKLAEPTL*ASISCQ Trigger: TTGGCAAGAAATGCTGGCGCAAAGTGTGGGCTCTGC...CAACTTCGAACATAACCCGTCTACTCTGACCTGCAGGGACAAGCCAGGTGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR GCA 90 bp | GTAGACGGGTTATGTTCGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTTGTGGACCTGTCGCCTaGTGGTCCCAGGCCACCATC | + |
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Preference number: 4 (lower is better) Translates to: VDGLCSKLFLVLGDHLCPCGPVA*WSQATI Trigger: GATGGTGGCCTGGGACCAGCAGGCGACAGGTCCACA...AGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGAACATAACCCGTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | GTAGACGGGTTATGTTCGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTCTTCAGGACCCCCATTaGTCAGCCCAGGGCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VDGLCSKLFLVLGDHLCPLQDPH*SAQGWP Trigger: AGGCCAGCCCTGGGCTGACCAATGGGGGTCCTGAAG...AGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGAACATAACCCGTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | TTATGTTCGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGTGGCTTCCAGATTGCTGTCCTaGGCCGAGCCCGGCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: LCSKLFLVLGDHLCPAVASRLLS*AEPGQL Trigger: GAGTTGGCCGGGCTCGGCCCAGGACAGCAATCTGGA...AGCCACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGAACATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | GCAAGCTTTATTACTGTTCAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGGGGCAGCTCAAATCCTaGGGCCACCTCCCGAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ASFITVQSVQSEGGGRAEGQLKS*GHLPKL Trigger: GAGCTTCGGGAGGTGGCCCCAGGATTTGAGCTGCCC...CTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTGAACAGTAATAAAGCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | CGGGCCACCTGGCTTGTCCCTGCAGGTCAGAGTAGACGGGTTATGTTCGAAGTTTTAGAGGCAGCTTTCTaGGAGTGGGCAGCTCAAATC | + |
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Preference number: 4 (lower is better) Translates to: RATWLVPAGQSRRVMFEVLEAAF*EWAAQI Trigger: GATTTGAGCTGCCCACTCCCAGAAAGCTGCCTCTAA...AACTTCGAACATAACCCGTCTACTCTGACCTGCAGGGACAAGCCAGGTGGCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | GCAAGCTTTATTACTGTTCAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGGTCAGCCCAGGGCTaGCCTCCAGCATGCACACGT | + |
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Preference number: 4 (lower is better) Translates to: ASFITVQSVQSEGGGRAEWSAQG*PPACTR Trigger: ACGTGTGCATGCTGGAGGCCAGCCCTGGGCTGACCA...CTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTGAACAGTAATAAAGCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | GACGGGTTATGTTCGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAAGCAGCCTCCGGTACTaGGCTTCCAGATTGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: DGLCSKLFLVLGDHLCPASSLRY*ASRLLS Trigger: GGACAGCAATCTGGAAGCCCAGTACCGGAGGCTGCT...TGCAGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGAACATAACCCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR GCA 90 bp | TTATGTTCGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGTGGCTGCAGAGCCCACACTTTaGGCCAGCATTTCTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LCSKLFLVLGDHLCPAVAAEPTL*ASISCQ Trigger: TTGGCAAGAAATGCTGGCGCAAAGTGTGGGCTCTGC...AGCCACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGAACATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CCA 90 bp | GTTGATAGGCAAGCTTTATTACTGTTCAATCTGTACAGTCTGAGGGAGGAGGTAAACAGGCCTGGGGCTTaGATGTCTCCCTCAGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VDRQALLLFNLYSLREEVNRPGA*MSPSVG Trigger: TCCAACTGAGGGAGACATCCAAGCCCCAGGCCTGTT...TACCTCCTCCCTCAGACTGTACAGATTGAACAGTAATAAAGCTTGCCTATCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 90 bp | GGGAGGGCAGGGAGAGGGCCCGAGGCAGGGGGCAGGGTGGGGACATaGCCAGCTCTGGAAGACGCTCCCGCTGGCGGGCAATGGCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRAGRGPEAGGRVGT*PALEDAPAGGQWRQ Trigger: CTGCCGCCATTGCCCGCCAGCGGGAGCGTCTTCCAGAGCTGGCCATGTCCCCACCCTGCCCCCTGCCTCGGGCCCTCTCCCTGCCCTCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS TCA 90 bp | GGCCCTTCTTCCGTTCACGGGTCAGCAGGGTCACCAGCTTGGCCTTaGTGCCTGCCTGCGCTCCAGAGCGGCCGGCGCTTCCGGCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GPSSVHGSAGSPAWP*CLPALQSGRRFRPH Trigger: ATGAGGCCGGAAGCGCCGGCCGCTCTGGAGCGCAGGCAGGCATCAAGGCCAAGCTGGTGACCCTGCTGACCCGTGAACGGAAGAAGGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS TCA 90 bp | TCTCGCCATCCGCAGGCAGGACAGATACACAGTCAGCCAAGCGTATaGCCCGGCGTTCCCCTCGACGGCTGGGCCCTGTGGACCTGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SRHPQAGQIHSQPSV*PGVPLDGWALWTCR Trigger: GCGACAGGTCCACAGGGCCCAGCCGTCGAGGGGAACGCCGGGTCATACGCTTGGCTGACTGTGTATCTGTCCTGCCTGCGGATGGCGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 90 bp | GGGGGCCCTCTTGGGCTTCAGGACCCCCATTGGTCAGCCCAGGGCTaGCCTCCAGCATGCACACGTTCTCATAGAGATGCTCCGCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGPLGLQDPHWSAQG*PPACTRSHRDAPPC Trigger: GCACGGCGGAGCATCTCTATGAGAACGTGTGCATGCTGGAGGCCAGCCCTGGGCTGACCAATGGGGGTCCTGAAGCCCAAGAGGGCCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 90 bp | GCGCTTCCGGCCTCATCCAGCTCCAGTTCCAGCAGCCTCCGGTACTaGGCTTCCAGATTGCTGTCCTGGGCCGAGCCCGGCCAACTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALPASSSSSSSSLRY*ASRLLSWAEPGQLR Trigger: TCTGAGTTGGCCGGGCTCGGCCCAGGACAGCAATCTGGAAGCCCAGTACCGGAGGCTGCTGGAACTGGAGCTGGATGAGGCCGGAAGCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | CAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCGCTTCAGGACCCCCATaGGTCAGCCCAGGGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSVQSEGGGRAECGSSPGASGPP*VSPGLA Trigger: GGCCAGCCCTGGGCTGACCAATGGGGGTCCTGAAGC...GCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 90 bp | GGGCTTCAGGACCCCCATTGGTCAGCCCAGGGCTGGCCTCCAGCATaGACACGTTCTCATAGAGATGCTCCGCCGTGCCTGTGTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLQDPHWSAQGWPPA*TRSHRDAPPCLCAC Trigger: GCAAGCACACAGGCACGGCGGAGCATCTCTATGAGAACGTGTGCATGCTGGAGGCCAGCCCTGGGCTGACCAATGGGGGTCCTGAAGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 90 bp | ATCCTGACGAACATTCTCCGGTACCCGGGAAGGCCAGCTGACAGATaGGGTCCACCCAGGACTGGCGGTGCTGTGCAGCCAACAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILTNILRYPGRPADR*GPPRTGGAVQPTGG Trigger: GCCACCTGTTGGCTGCACAGCACCGCCAGTCCTGGGTGGACCCCATCTGTCAGCTGGCCTTCCCGGGTACCGGAGAATGTTCGTCAGGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 90 bp | GGCCCAGCACCAGGAGGTAGGGTCCTTTCAGCTGGCAGCGGGAGGTaGCCTCTGTCCTCTGCACGATCACCGGAAACTCGGTCACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPAPGGRVLSAGSGR*PLSSARSPETRSLP Trigger: AGGAAGTGACCGAGTTTCCGGTGATCGTGCAGAGGACAGAGGCCACCTCCCGCTGCCAGCTGAAAGGACCCTACCTCCTGGTGCTGGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS TCA 90 bp | TGTCCTGATCCTGACGAACATTCTCCGGTACCCGGGAAGGCCAGCTaGCAGATGGGGTCCACCCAGGACTGGCGGTGCTGTGCAGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: CPDPDEHSPVPGKAS*QMGSTQDWRCCAAN Trigger: GTTGGCTGCACAGCACCGCCAGTCCTGGGTGGACCCCATCTGTCAGCTGGCCTTCCCGGGTACCGGAGAATGTTCGTCAGGATCAGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 90 bp | GAAGGCCAGCTGACAGATGGGGTCCACCCAGGACTGGCGGTGCTGTaGAGCCAACAGGTGGCTTCGCTCAGTGGTGGTAATCAGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EGQLTDGVHPGLAVL*SQQVASLSGGNQEG Trigger: GCCTTCCTGATTACCACCACTGAGCGAAGCCACCTGTTGGCTGCACAGCACCGCCAGTCCTGGGTGGACCCCATCTGTCAGCTGGCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 90 bp | CAGATGGGGTCCACCCAGGACTGGCGGTGCTGTGCAGCCAACAGGTaGCTTCGCTCAGTGGTGGTAATCAGGAAGGCACCAGTGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QMGSTQDWRCCAANR*LRSVVVIRKAPVSL Trigger: CAGGGACACTGGTGCCTTCCTGATTACCACCACTGAGCGAAGCCACCTGTTGGCTGCACAGCACCGCCAGTCCTGGGTGGACCCCATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 90 bp | GTAGGCTTTGAGGCCCGGGATCAGTTAGAGGCAGCTTTCTGGGAGTaGGCAGCTCAAATCCTGGGGCCACCTCCCGAAGCTCTCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGFEARDQLEAAFWE*AAQILGPPPEALQG Trigger: CCCCTGGAGAGCTTCGGGAGGTGGCCCCAGGATTTGAGCTGCCCACTCCCAGAAAGCTGCCTCTAACTGATCCCGGGCCTCAAAGCCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 90 bp | GCAGTGGTAGGCTTTGAGGCCCGGGATCAGTTAGAGGCAGCTTTCTaGGAGTGGGCAGCTCAAATCCTGGGGCCACCTCCCGAAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AVVGFEARDQLEAAF*EWAAQILGPPPEAL Trigger: GAGAGCTTCGGGAGGTGGCCCCAGGATTTGAGCTGCCCACTCCCAGAAAGCTGCCTCTAACTGATCCCGGGCCTCAAAGCCTACCACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | TGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGTGGCTGGCCGCTCAGGCCAAACAGGCCTGGGGCTaGGATGTCTCCCTCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSWSWVITSVLQWLAAQAKQAWG*DVSLSW Trigger: CCAACTGAGGGAGACATCCAAGCCCCAGGCCTGTTT...GGCCTGAGCGGCCAGCCACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | TTCAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCGTGCCTGTGTGCTaGCTGGTCTGCTTGCACACG | + |
|
Preference number: 5 (lower is better) Translates to: FNLYSLREEVGQSVAPPRAVPVC*LVCLHT Trigger: CGTGTGCAAGCAGACCAGCAAGCACACAGGCACGGC...CCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | GTTCAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGTACTGGGCTTCCAGATaGCTGTCCTGGGCCGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VQSVQSEGGGRAECGSSPYWASR*LSWAEP Trigger: GGGCTCGGCCCAGGACAGCAATCTGGAAGCCCAGTA...CGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | TCGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGTGGCTGGCCGCTACTGGGCTTCCAGATaGCTGTCCTGGGCCGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SKLFLVLGDHLCPAVAGRYWASR*LSWAEP Trigger: GGGCTCGGCCCAGGACAGCAATCTGGAAGCCCAGTA...GCGGCCAGCCACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS TCA 90 bp | TATGTCTGGGGCACGCGGGCTACTGAAGGCAAAAAGGCCCTCACCTaGGTCACAGCGGCGGCCAGCCTCAAACGAGAACACACCCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: YVWGTRATEGKKALT*VTAAASLKREHTLV Trigger: GACAAGGGTGTGTTCTCGTTTGAGGCTGGCCGCCGCTGTGACTCAGGTGAGGGCCTTTTTGCCTTCAGTAGCCCGCGTGCCCCAGACATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 90 bp | GCATGCACACGTTCTCATAGAGATGCTCCGCCGTGCCTGTGTGCTTaGTGGTCTGCTTGCACACGGACGCATAGAGACCGGATGCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ACTRSHRDAPPCLCA*WSACTRTHRDRMPV Trigger: GACCGGCATCCGGTCTCTATGCGTCCGTGTGCAAGCAGACCAGCAAGCACACAGGCACGGCGGAGCATCTCTATGAGAACGTGTGCATGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 90 bp | GGCTGGCCTCCAGCATGCACACGTTCTCATAGAGATGCTCCGCCGTaGCTGTGTGCTTGCTGGTCTGCTTGCACACGGACGCATAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GWPPACTRSHRDAPP*LCACWSACTRTHRD Trigger: GTCTCTATGCGTCCGTGTGCAAGCAGACCAGCAAGCACACAGGCACGGCGGAGCATCTCTATGAGAACGTGTGCATGCTGGAGGCCAGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 90 bp | CATCCAGCTCCAGTTCCAGCAGCCTCCGGTACTGGGCTTCCAGATTaGTGTCCTGGGCCGAGCCCGGCCAACTCAGATCCTCAGTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: HPAPVPAASGTGLPD*CPGPSPANSDPQCY Trigger: ATAACACTGAGGATCTGAGTTGGCCGGGCTCGGCCCAGGACAGCAATCTGGAAGCCCAGTACCGGAGGCTGCTGGAACTGGAGCTGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | TGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGTGGCTGGCCGCTCAGGCCCAGTTGGATGTCATCTaGGCCCAGCACCAGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CSWSWVITSVLQWLAAQAQLDVI*AQHQEV Trigger: TACCTCCTGGTGCTGGGCCAAGATGACATCCAACTG...GGCCTGAGCGGCCAGCCACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | CAATCTGTACAGTCTGAGGGAGGAGGTAGGGCAGAGTGTGGCTCCTCCCCGGGCCAGTTGGATGTCATCTaGGCCCAGCACCAGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QSVQSEGGGRAECGSSPGQLDVI*AQHQEV Trigger: TACCTCCTGGTGCTGGGCCAAGATGACATCCAACTG...GCCCGGGGAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | GGGCCACCTGGCTTGTCCCTGCAGGTCAGAGTAGACGGGTTATGTTCGAAGTTGGCCGTGCCTGTGTGCTaGCTGGTCTGCTTGCACACG | + |
|
Preference number: 5 (lower is better) Translates to: GPPGLSLQVRVDGLCSKLAVPVC*LVCLHT Trigger: CGTGTGCAAGCAGACCAGCAAGCACACAGGCACGGC...CAACTTCGAACATAACCCGTCTACTCTGACCTGCAGGGACAAGCCAGGTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 90 bp | TCTCATAGAGATGCTCCGCCGTGCCTGTGTGCTTGCTGGTCTGCTTaGACACGGACGCATAGAGACCGGATGCCGGTCCTTCTTGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHRDAPPCLCACWSA*TRTHRDRMPVLLVW Trigger: CCACACAAGAAGGACCGGCATCCGGTCTCTATGCGTCCGTGTGCAAGCAGACCAGCAAGCACACAGGCACGGCGGAGCATCTCTATGAGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 90 bp | TGCACACGTTCTCATAGAGATGCTCCGCCGTGCCTGTGTGCTTGCTaGTCTGCTTGCACACGGACGCATAGAGACCGGATGCCGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CTRSHRDAPPCLCAC*SACTRTHRDRMPVL Trigger: AAGGACCGGCATCCGGTCTCTATGCGTCCGTGTGCAAGCAGACCAGCAAGCACACAGGCACGGCGGAGCATCTCTATGAGAACGTGTGCA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | GGGTTATGTTCGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGTGGCTTCAGGACCCCCATaGGTCAGCCCAGGGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLCSKLFLVLGDHLCPAVASGPP*VSPGLA Trigger: GGCCAGCCCTGGGCTGACCAATGGGGGTCCTGAAGC...CACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGAACATAACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | TCGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGTGGCTGGCCGCAGCAGAGCCCACACTTaGCGCCAGCATTTCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SKLFLVLGDHLCPAVAGRSRAHT*RQHFLP Trigger: TGGCAAGAAATGCTGGCGCAAAGTGTGGGCTCTGCT...GCGGCCAGCCACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | GGGCCACCTGGCTTGTCCCTGCAGGTCAGAGTAGACGGGTTATGTTCGAAGTTGTTGCGCCAGCATTTCTaGCCAAACTTTACGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GPPGLSLQVRVDGLCSKLLRQHF*PNFTCC Trigger: GCAGCACGTAAAGTTTGGCAAGAAATGCTGGCGCAA...CAACTTCGAACATAACCCGTCTACTCTGACCTGCAGGGACAAGCCAGGTGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | TATGTTCGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGTGGCTGAAACAGGCCTGGGGCTaGGATGTCTCCCTCAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: YVRSCSWSWVITSVLQWLKQAWG*DVSLSW Trigger: CCAACTGAGGGAGACATCCAAGCCCCAGGCCTGTTT...CAGCCACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGAACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | TATGTTCGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGTGGCTGAGCAGAGCCCACACTTaGCGCCAGCATTTCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YVRSCSWSWVITSVLQWLSRAHT*RQHFLP Trigger: TGGCAAGAAATGCTGGCGCAAAGTGTGGGCTCTGCT...CAGCCACTGCAGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGAACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | GACGGGTTATGTTCGAAGTTGTTCCTGGTCTTGGGTGATCACCTCTGTCCTGCAGAACAAAGCCCCTTTTaGGACTCTCAGCCTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DGLCSKLFLVLGDHLCPAEQSPF*DSQPVL Trigger: CAGGACAGGCTGAGAGTCCAAAAAGGGGCTTTGTTC...TGCAGGACAGAGGTGATCACCCAAGACCAGGAACAACTTCGAACATAACCCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS-3UTR CAA 90 bp | GTTGATAGGCAAGCTTTATTACTGTTCAATCTGTACAGTCTGAGGGAGGAGGTATTGCGCCAGCATTTCTaGCCAAACTTTACGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VDRQALLLFNLYSLREEVLRQHF*PNFTCC Trigger: GCAGCACGTAAAGTTTGGCAAGAAATGCTGGCGCAA...TACCTCCTCCCTCAGACTGTACAGATTGAACAGTAATAAAGCTTGCCTATCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CAA 90 bp | GGGGCGGGGCCCTTCTTCCGTTCACGGGTCAGCAGGGTCACCAGCTaGGCCTTGATGCCTGCCTGCGCTCCAGAGCGGCCGGCGCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GAGPFFRSRVSRVTS*ALMPACAPERPALP Trigger: CGGAAGCGCCGGCCGCTCTGGAGCGCAGGCAGGCATCAAGGCCAAGCTGGTGACCCTGCTGACCCGTGAACGGAAGAAGGGCCCCGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CAA 90 bp | GGGCCCTTCTTCCGTTCACGGGTCAGCAGGGTCACCAGCTTGGCCTaGATGCCTGCCTGCGCTCCAGAGCGGCCGGCGCTTCCGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GPFFRSRVSRVTSLA*MPACAPERPALPAS Trigger: TGAGGCCGGAAGCGCCGGCCGCTCTGGAGCGCAGGCAGGCATCAAGGCCAAGCTGGTGACCCTGCTGACCCGTGAACGGAAGAAGGGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 72 bp | TTCCCCTCGACGGCTGGGCCCTGTGGACCTGTCGCCTaGTGGTCCCAGGCCACCATCACGCACGTCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FPSTAGPCGPVA*WSQATITHVPA Trigger: AGCTGGGACGTGCGTGATGGTGGCCTGGGACCAGCAGGCGACAGGTCCACAGGGCCCAGCCGTCGAGGGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 72 bp | CCCTCGACGGCTGGGCCCTGTGGACCTGTCGCCTGCTaGTCCCAGGCCACCATCACGCACGTCCCAGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSTAGPCGPVAC*SQATITHVPAF Trigger: GAAAGCTGGGACGTGCGTGATGGTGGCCTGGGACCAGCAGGCGACAGGTCCACAGGGCCCAGCCGTCGAGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
||
| CDS TCA 72 bp | CCGCAGGCAGGACAGATACACAGTCAGCCAAGCGTATaGCCCGGCGTTCCCCTCGACGGCTGGGCCCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PQAGQIHSQPSV*PGVPLDGWALW Trigger: CCACAGGGCCCAGCCGTCGAGGGGAACGCCGGGTCATACGCTTGGCTGACTGTGTATCTGTCCTGCCTGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
||
| CDS CCA 72 bp | TGGCCAGCTCTGGAAGACGCTCCCGCTGGCGGGCAATaGCGGCAGCCACAACCCCACATATGTCTGGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: WPALEDAPAGGQ*RQPQPHICLGH Trigger: GTGCCCCAGACATATGTGGGGTTGTGGCTGCCGCCATTGCCCGCCAGCGGGAGCGTCTTCCAGAGCTGGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
||
| CDS CCA 72 bp | GCCTCATCCAGCTCCAGTTCCAGCAGCCTCCGGTACTaGGCTTCCAGATTGCTGTCCTGGGCCGAGCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASSSSSSSSLRY*ASRLLSWAEPG Trigger: GCCGGGCTCGGCCCAGGACAGCAATCTGGAAGCCCAGTACCGGAGGCTGCTGGAACTGGAGCTGGATGAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS TCA 72 bp | CCTGACGAACATTCTCCGGTACCCGGGAAGGCCAGCTaGCAGATGGGGTCCACCCAGGACTGGCGGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PDEHSPVPGKAS*QMGSTQDWRCC Trigger: ACAGCACCGCCAGTCCTGGGTGGACCCCATCTGTCAGCTGGCCTTCCCGGGTACCGGAGAATGTTCGTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 72 bp | GACCCCCATTGGTCAGCCCAGGGCTGGCCTCCAGCATaGACACGTTCTCATAGAGATGCTCCGCCGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: DPHWSAQGWPPA*TRSHRDAPPCL Trigger: CAGGCACGGCGGAGCATCTCTATGAGAACGTGTGCATGCTGGAGGCCAGCCCTGGGCTGACCAATGGGGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 72 bp | CCAGTTCCAGCAGCCTCCGGTACTGGGCTTCCAGATTaGTGTCCTGGGCCGAGCCCGGCCAACTCAGATCCT | + |
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Preference number: 6 (lower is better) Translates to: PVPAASGTGLPD*CPGPSPANSDP Trigger: AGGATCTGAGTTGGCCGGGCTCGGCCCAGGACAGCAATCTGGAAGCCCAGTACCGGAGGCTGCTGGAACTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 72 bp | AACATTCTCCGGTACCCGGGAAGGCCAGCTGACAGATaGGGTCCACCCAGGACTGGCGGTGCTGTGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: NILRYPGRPADR*GPPRTGGAVQP Trigger: TGGCTGCACAGCACCGCCAGTCCTGGGTGGACCCCATCTGTCAGCTGGCCTTCCCGGGTACCGGAGAATGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 72 bp | CCAGGAGGTAGGGTCCTTTCAGCTGGCAGCGGGAGGTaGCCTCTGTCCTCTGCACGATCACCGGAAACTCGG | + |
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Preference number: 6 (lower is better) Translates to: PGGRVLSAGSGR*PLSSARSPETR Trigger: CCGAGTTTCCGGTGATCGTGCAGAGGACAGAGGCCACCTCCCGCTGCCAGCTGAAAGGACCCTACCTCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 72 bp | GCGGGCAATGGCGGCAGCCACAACCCCACATATGTCTaGGGCACGCGGGCTACTGAAGGCAAAAAGGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: AGNGGSHNPTYV*GTRATEGKKAL Trigger: GAGGGCCTTTTTGCCTTCAGTAGCCCGCGTGCCCCAGACATATGTGGGGTTGTGGCTGCCGCCATTGCCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CAA 72 bp | TCCAGTTCCAGCAGCCTCCGGTACTGGGCTTCCAGATaGCTGTCCTGGGCCGAGCCCGGCCAACTCAGATCC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSLRYWASR*LSWAEPGQLRS Trigger: GGATCTGAGTTGGCCGGGCTCGGCCCAGGACAGCAATCTGGAAGCCCAGTACCGGAGGCTGCTGGAACTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 72 bp | CCTTTCAGCTGGCAGCGGGAGGTGGCCTCTGTCCTCTaGACGATCACCGGAAACTCGGTCACTTCCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PFSWQREVASVL*TITGNSVTSCQ Trigger: CTGGCAGGAAGTGACCGAGTTTCCGGTGATCGTGCAGAGGACAGAGGCCACCTCCCGCTGCCAGCTGAAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 72 bp | GATGCTCCGCCGTGCCTGTGTGCTTGCTGGTCTGCTTaGACACGGACGCATAGAGACCGGATGCCGGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: DAPPCLCACWSA*TRTHRDRMPVL Trigger: AAGGACCGGCATCCGGTCTCTATGCGTCCGTGTGCAAGCAGACCAGCAAGCACACAGGCACGGCGGAGCATC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 72 bp | GGCTTTGAGGCCCGGGATCAGTTAGAGGCAGCTTTCTaGGAGTGGGCAGCTCAAATCCTGGGGCCACCTCCC | + |
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Preference number: 6 (lower is better) Translates to: GFEARDQLEAAF*EWAAQILGPPP Trigger: GGGAGGTGGCCCCAGGATTTGAGCTGCCCACTCCCAGAAAGCTGCCTCTAACTGATCCCGGGCCTCAAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS TCA 72 bp | CATAGAGACCGGATGCCGGTCCTTCTTGTGTGGGGCTaGGCAGCAGTGGTAGGCTTTGAGGCCCGGGATCAG | + |
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Preference number: 6 (lower is better) Translates to: HRDRMPVLLVWG*AAVVGFEARDQ Trigger: CTGATCCCGGGCCTCAAAGCCTACCACTGCTGCTCAGCCCCACACAAGAAGGACCGGCATCCGGTCTCTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 72 bp | CTGACAGATGGGGTCCACCCAGGACTGGCGGTGCTGTaGAGCCAACAGGTGGCTTCGCTCAGTGGTGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: LTDGVHPGLAVL*SQQVASLSGGN Trigger: ATTACCACCACTGAGCGAAGCCACCTGTTGGCTGCACAGCACCGCCAGTCCTGGGTGGACCCCATCTGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 72 bp | TCCACCCAGGACTGGCGGTGCTGTGCAGCCAACAGGTaGCTTCGCTCAGTGGTGGTAATCAGGAAGGCACCA | + |
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Preference number: 6 (lower is better) Translates to: STQDWRCCAANR*LRSVVVIRKAP Trigger: TGGTGCCTTCCTGATTACCACCACTGAGCGAAGCCACCTGTTGGCTGCACAGCACCGCCAGTCCTGGGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 72 bp | AGCAGCCTCCGGTACTGGGCTTCCAGATTGCTGTCCTaGGCCGAGCCCGGCCAACTCAGATCCTCAGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: SSLRYWASRLLS*AEPGQLRSSVL Trigger: TAACACTGAGGATCTGAGTTGGCCGGGCTCGGCCCAGGACAGCAATCTGGAAGCCCAGTACCGGAGGCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CAA 90 bp | TCATCCAGCTCCAGTTCCAGCAGCCTCCGGTACTGGGCTTCCAGATaGCTGTCCTGGGCCGAGCCCGGCCAACTCAGATCCTCAGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSSSLRYWASR*LSWAEPGQLRSSVL Trigger: TAACACTGAGGATCTGAGTTGGCCGGGCTCGGCCCAGGACAGCAATCTGGAAGCCCAGTACCGGAGGCTGCTGGAACTGGAGCTGGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 72 bp | CGTTCTCATAGAGATGCTCCGCCGTGCCTGTGTGCTTaGTGGTCTGCTTGCACACGGACGCATAGAGACCGG | + |
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Preference number: 6 (lower is better) Translates to: RSHRDAPPCLCA*WSACTRTHRDR Trigger: CCGGTCTCTATGCGTCCGTGTGCAAGCAGACCAGCAAGCACACAGGCACGGCGGAGCATCTCTATGAGAACG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 72 bp | CCAGCATGCACACGTTCTCATAGAGATGCTCCGCCGTaGCTGTGTGCTTGCTGGTCTGCTTGCACACGGACG | + |
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Preference number: 6 (lower is better) Translates to: PACTRSHRDAPP*LCACWSACTRT Trigger: CGTCCGTGTGCAAGCAGACCAGCAAGCACACAGGCACGGCGGAGCATCTCTATGAGAACGTGTGCATGCTGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CCA 72 bp | TCTCATAGAGATGCTCCGCCGTGCCTGTGTGCTTGCTaGTCTGCTTGCACACGGACGCATAGAGACCGGATG | + |
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Preference number: 6 (lower is better) Translates to: SHRDAPPCLCAC*SACTRTHRDRM Trigger: CATCCGGTCTCTATGCGTCCGTGTGCAAGCAGACCAGCAAGCACACAGGCACGGCGGAGCATCTCTATGAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CAA 72 bp | CTGGGGCTTGGATGTCTCCCTCAGTTGGATGTCATCTaGGCCCAGCACCAGGAGGTAGGGTCCTTTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LGLGCLPQLDVI*AQHQEVGSFQL Trigger: CAGCTGAAAGGACCCTACCTCCTGGTGCTGGGCCAAGATGACATCCAACTGAGGGAGACATCCAAGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS CAA 72 bp | CCTGATGGGCCTCCCGCATACAGCAGAGCCCACACTTaGCGCCAGCATTTCTTGCCAAACTTTACGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PDGPPAYSRAHT*RQHFLPNFTCC Trigger: GCAGCACGTAAAGTTTGGCAAGAAATGCTGGCGCAAAGTGTGGGCTCTGCTGTATGCGGGAGGCCCATCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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| CDS GCA 72 bp | CTGATGGGCCTCCCGCATACAGCAGAGCCCACACTTTaGGCCAGCATTTCTTGCCAAACTTTACGTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LMGLPHTAEPTL*ASISCQTLRAA Trigger: AGCAGCACGTAAAGTTTGGCAAGAAATGCTGGCGCAAAGTGTGGGCTCTGCTGTATGCGGGAGGCCCATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047877.5 ENSMUST00000223563.2 |
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