Pregenerated sensors for DOK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022102Ensembl transcript IDs: ENSMUST00000022698.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCCCAGTTCCCTTTAGACCCAAGGCAGTGGGAGGAAGTGGAAAAGTGTAGGAGGAAGGCACACCGAGCCTaGGGCCCAGGAAGGGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: PQFPLDPRQWEEVEKCRRKAHRA*GPGRGS Trigger: ACTGCCCCTTCCTGGGCCCCAGGCTCGGTGTGCCTT...CCTCCTACACTTTTCCACTTCCTCCCACTGCCTTGGGTCTAAAGGGAACTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGCCCACACCGAGGAGCCAGGACATCTGTGGAAACCCTTTGTCTCTTAAGTTAGACCCAAGGCAGTaGGAGGAAGTGGAAAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: GLPTPRSQDICGNPLSLKLDPRQ*EEVEKC Trigger: ACACTTTTCCACTTCCTCCCACTGCCTTGGGTCTAA...CTTAAGAGACAAAGGGTTTCCACAGATGTCCTGGCTCCTCGGTGTGGGCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | TCACACAGTACACAAATAAGGCACACCGAGCCTGGGGCCCAGGAAGGGGCAGTATGTGGCTGGCAGGGATaGAGGCCCGGAAGGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SHSTQIRHTEPGAQEGAVCGWQG*RPGRGG Trigger: GCCACCCCTTCCGGGCCTCCATCCCTGCCAGCCACA...TACTGCCCCTTCCTGGGCCCCAGGCTCGGTGTGCCTTATTTGTGTACTGTGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | CCCCAGTTCCCTTTAGACCCAAGGCAGTGGGAGGAAGTGGAAAAGTGTAGGAGGCATGGGCCCTGTGGCTaGCAGGGATGGAGGCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: PQFPLDPRQWEEVEKCRRHGPCG*QGWRPG Trigger: TCCGGGCCTCCATCCCTGCCAGCCACAGGGCCCATG...CCTCCTACACTTTTCCACTTCCTCCCACTGCCTTGGGTCTAAAGGGAACTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | GGTCCCTCCAGGGCCCTCTTTCTGCTCCAGGCTAGTGACTCACACAGTACACAAGCATCATGGGCCCTGTaGCTGGCAGGGATGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: GPSRALFLLQASDSHSTQASWAL*LAGMEA Trigger: GGCCTCCATCCCTGCCAGCCACAGGGCCCATGATGC...TTGTGTACTGTGTGAGTCACTAGCCTGGAGCAGAAAGAGGGCCCTGGAGGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | GGTCCCTCCAGGGCCCTCTTTCTGCTCCAGGCTAGTGACTCACACAGTACACAAGCACAGTGGGCATCATaGGCCCTGTGGCTGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GPSRALFLLQASDSHSTQAQWAS*ALWLAG Trigger: CCCTGCCAGCCACAGGGCCCATGATGCCCACTGTGC...TTGTGTACTGTGTGAGTCACTAGCCTGGAGCAGAAAGAGGGCCCTGGAGGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR TCA 90 bp | CCACAGCTTCCGAAGACCTCCCTGGGAACCACATATCCCATCTTCTGGCCATCCCCTCCATGTCTCCCCTaGGGGCCTCTGTGTCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PQLPKTSLGTTYPIFWPSPPCLP*GPLCPV Trigger: GACAGGACACAGAGGCCCTCAGGGGAGACATGGAGG...GGATGGCCAGAAGATGGGATATGTGGTTCCCAGGGAGGTCTTCGGAAGCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR GCA 90 bp | CTCTGGGAGCTAGAGGGACAACAGCTACTCTCGCTGCTAACCAGAAGCCAGGGTCCATCGGCAGTGGCCTaGTCCCTCCATGTCTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: LWELEGQQLLSLLTRSQGPSAVA*SLHVSP Trigger: AGGGGAGACATGGAGGGAGCAGGCCACTGCCGATGG...ACCCTGGCTTCTGGTTAGCAGCGAGAGTAGCTGTTGTCCCTCTAGCTCCCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR GCA 90 bp | GGCCTGCCCACACCGAGGAGCCAGGACATCTGTGGAAACCCTTTGTCTCTTAAGGGCACAGAGGAGTCTTaGTGGAGGGAGCTGGGACCC | + |
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Preference number: 4 (lower is better) Translates to: GLPTPRSQDICGNPLSLKGTEES*WRELGP Trigger: GGGTCCCAGCTCCCTCCAGCAAGACTCCTCTGTGCC...CTTAAGAGACAAAGGGTTTCCACAGATGTCCTGGCTCCTCGGTGTGGGCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR TCA 90 bp | CCACAGCTTCCGAAGACCTCCCTGGGAACCACATATCCCATCTTCTGGCCATCCTTCCTCCAGTCCTGGTaGCCCTTTCCTCTGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PQLPKTSLGTTYPIFWPSFLQSW*PFPLSR Trigger: CCGGGACAGAGGAAAGGGTCACCAGGACTGGAGGAA...GGATGGCCAGAAGATGGGATATGTGGTTCCCAGGGAGGTCTTCGGAAGCTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR GCA 90 bp | TCACACAGTACACAAATAAGGCACACCGAGCCTGGGGCCCAGGAAGGGGCAGTAGGCTGCTGGCCTCACTaGCTACCTCTGCTACCCGTA | + |
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Preference number: 4 (lower is better) Translates to: SHSTQIRHTEPGAQEGAVGCWPH*LPLLPV Trigger: TACGGGTAGCAGAGGTAGGCAGTGAGGCCAGCAGCC...TACTGCCCCTTCCTGGGCCCCAGGCTCGGTGTGCCTTATTTGTGTACTGTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR GCA 90 bp | GCAGTAACCAAAAGGACTCTACCAGAAGCCACCATTTCCCCTCCACAGCTTCCGTGGTGTCCCGGGGGCTaGTGGCCTCACTGCCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: AVTKRTLPEATISPPQLPWCPGG*WPHCLP Trigger: AGGTAGGCAGTGAGGCCAGCAGCCCCCGGGACACCA...CGGAAGCTGTGGAGGGGAAATGGTGGCTTCTGGTAGAGTCCTTTTGGTTACTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR GCA 90 bp | CAGAAGCCACCATTTCCCCTCCACAGCTTCCGAAGACCTCCCTGGGAACCACATTGCCAGGCACCAGTGTaGCAGGGGATGGAGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: QKPPFPLHSFRRPPWEPHCQAPV*QGMEKA Trigger: TGCCTTCTCCATCCCCTGGCACACTGGTGCCTGGCA...ATGTGGTTCCCAGGGAGGTCTTCGGAAGCTGTGGAGGGGAAATGGTGGCTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | CAGAAGCCACCATTTCCCCTCCACAGCTTCCGAAGACCTCCCTGGGAACCACATACAGAGGAGTCTTGCTaGAGGGAGCTGGGACCCCCA | + |
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Preference number: 4 (lower is better) Translates to: QKPPFPLHSFRRPPWEPHTEESC*RELGPP Trigger: TGGGGGTCCCAGCTCCCTCCAGCAAGACTCCTCTGT...ATGTGGTTCCCAGGGAGGTCTTCGGAAGCTGTGGAGGGGAAATGGTGGCTTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR TCA 90 bp | CTCTGGGAGCTAGAGGGACAACAGCTACTCTCGCTGCTAACCAGAAGCCAGGGTAAGGTCTGCTGCTGCTaGAGATGCAGGAAGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LWELEGQQLLSLLTRSQGKVCCC*RCRKPC Trigger: GCAGGGCTTCCTGCATCTTCAGCAGCAGCAGACCTT...ACCCTGGCTTCTGGTTAGCAGCGAGAGTAGCTGTTGTCCCTCTAGCTCCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR TCA 90 bp | CAGAAGCCACCATTTCCCCTCCACAGCTTCCGAAGACCTCCCTGGGAACCACATGCCCCAGGATCCTCCTaGATGCTGTCATACAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: QKPPFPLHSFRRPPWEPHAPGSS*MLSYSG Trigger: CCCACTGTATGACAGCATTCAGGAGGATCCTGGGGC...ATGTGGTTCCCAGGGAGGTCTTCGGAAGCTGTGGAGGGGAAATGGTGGCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR GCA 90 bp | CTAGAGGGACAACAGCTACTCTCGCTGCTAACCAGAAGCCAGGGTTGTCCCAGGACCGGCGCCACTTCTTaGCAAAGGTCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LEGQQLLSLLTRSQGCPRTGATS*QRSAAA Trigger: AGCAGCAGCAGACCTTTGGCAAGAAGTGGCGCCGGT...CCTGGGACAACCCTGGCTTCTGGTTAGCAGCGAGAGTAGCTGTTGTCCCTCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR GCA 90 bp | TCACACAGTACACAAATAAGGCACACCGAGCCTGGGGCCCAGGAAGGGGCAGTACCTCCATGCAGGGACTaGCGCTCTTTTCCTCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SHSTQIRHTEPGAQEGAVPPCRD*RSFPPV Trigger: GACTGGAGGAAAAGAGCGGCAGTCCCTGCATGGAGG...TACTGCCCCTTCCTGGGCCCCAGGCTCGGTGTGCCTTATTTGTGTACTGTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | AGGGCCCTCTTTCTGCTCCAGGCTAGTGACTCACACAGTACACAAATAAGGCACTGTCCCGGGGGCTGCTaGCCTCACTGCCTACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RALFLLQASDSHSTQIRHCPGGC*PHCLPL Trigger: CAGAGGTAGGCAGTGAGGCCAGCAGCCCCCGGGACA...GTGCCTTATTTGTGTACTGTGTGAGTCACTAGCCTGGAGCAGAAAGAGGGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | CTAGAGGGACAACAGCTACTCTCGCTGCTAACCAGAAGCCAGGGTTGTCCCAGGGAGGCCCGGAAGGGGTaGCATTCTTCTGGACAGCAA | + |
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Preference number: 4 (lower is better) Translates to: LEGQQLLSLLTRSQGCPREARKG*HSSGQQ Trigger: TTGCTGTCCAGAAGAATGCCACCCCTTCCGGGCCTC...CCTGGGACAACCCTGGCTTCTGGTTAGCAGCGAGAGTAGCTGTTGTCCCTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | CTAGAGGGACAACAGCTACTCTCGCTGCTAACCAGAAGCCAGGGTTGTCCCAGGCAGTGTGCCAGGGGATaGAGAAGGCAGAGAGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEGQQLLSLLTRSQGCPRQCARG*RRQRVV Trigger: CACGACTCTCTGCCTTCTCCATCCCCTGGCACACTG...CCTGGGACAACCCTGGCTTCTGGTTAGCAGCGAGAGTAGCTGTTGTCCCTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR TCA 90 bp | AGAAAACTCTGGGAGCTAGAGGGACAACAGCTACTCTCGCTGCTAACCAGAAGCCCGTCAGGAGGCCCCTaGAGCTCTTCCTCAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKLWELEGQQLLSLLTRSPSGGP*SSSSGS Trigger: ACTCCCTGAGGAAGAGCTTCAGGGGCCTCCTGACGG...GCTTCTGGTTAGCAGCGAGAGTAGCTGTTGTCCCTCTAGCTCCCAGAGTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR GCA 90 bp | CCACAGCTTCCGAAGACCTCCCTGGGAACCACATATCCCATCTTCTGGCCATCCCAGGATCCTCCTGAATaGTGTCATACAGTGGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: PQLPKTSLGTTYPIFWPSQDPPE*CHTVGR Trigger: CCGACCCACTGTATGACAGCATTCAGGAGGATCCTG...GGATGGCCAGAAGATGGGATATGTGGTTCCCAGGGAGGTCTTCGGAAGCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | CTTTGTCTCTTAAGAGAAATGGCCCCAGTTCCCTTTAGACCCAAGGCAGTGGGAGTCGAGGCAGCACAGTaGGCATCATGGGCCCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LCLLREMAPVPFRPKAVGVEAAQ*ASWALW Trigger: CCACAGGGCCCATGATGCCCACTGTGCTGCCTCGAC...TCCCACTGCCTTGGGTCTAAAGGGAACTGGGGCCATTTCTCTTAAGAGACAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | GGTCCCTCCAGGGCCCTCTTTCTGCTCCAGGCTAGTGACTCACACAGTACACAAATACTCAGTTGCCTGTaGCCAGTCAGGCACAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: GPSRALFLLQASDSHSTQILSCL*PVRHRG Trigger: TCCTCTGTGCCTGACTGGCCACAGGCAACTGAGTAT...TTGTGTACTGTGTGAGTCACTAGCCTGGAGCAGAAAGAGGGCCCTGGAGGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR GCA 90 bp | AGGGCCCTCTTTCTGCTCCAGGCTAGTGACTCACACAGTACACAAATAAGGCACAGTCATATAGCTGTGTaGCTGGCTCAGGGCCACCCC | + |
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Preference number: 4 (lower is better) Translates to: RALFLLQASDSHSTQIRHSHIAV*LAQGHP Trigger: GGGGTGGCCCTGAGCCAGGCACACAGCTATATGACT...GTGCCTTATTTGTGTACTGTGTGAGTCACTAGCCTGGAGCAGAAAGAGGGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | CTCGCTGCTAACCAGAAGCCAGGGTTGTCCCAGGAACAAAACATCTATAGGCAGGCCCTGCTTCACAGCTaGCTCCTCCATCCTGACCAT | + |
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Preference number: 4 (lower is better) Translates to: LAANQKPGLSQEQNIYRQALLHS*LLHPDH Trigger: ATGGTCAGGATGGAGGAGCCAGCTGTGAAGCAGGGC...CTGCCTATAGATGTTTTGTTCCTGGGACAACCCTGGCTTCTGGTTAGCAGCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | AGGGCCCTCTTTCTGCTCCAGGCTAGTGACTCACACAGTACACAAATAAGGCACCCTGGAGCTCTAGTCTaGCTAGGGCACAGCCAGACT | + |
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Preference number: 4 (lower is better) Translates to: RALFLLQASDSHSTQIRHPGALV*LGHSQT Trigger: AGTCTGGCTGTGCCCTAGCCAGACTAGAGCTCCAGG...GTGCCTTATTTGTGTACTGTGTGAGTCACTAGCCTGGAGCAGAAAGAGGGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCAGGACATCTGTGGAAACCCTTTGTCTCTTAAGAGAAATGGCCCCAGTTGGACAACCTTCCGAGTaGCCTCTCCTCGCCGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GARTSVETLCLLREMAPVGQPSE*PLLAVS Trigger: AGACACGGCGAGGAGAGGCCACTCGGAAGGTTGTCC...AACTGGGGCCATTTCTCTTAAGAGACAAAGGGTTTCCACAGATGTCCTGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR TCA 90 bp | AGAAAACTCTGGGAGCTAGAGGGACAACAGCTACTCTCGCTGCTAACCAGAAGCCTCTTCCTCAGGGAGTaGGCCACCGTATCAAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: RKLWELEGQQLLSLLTRSLFLRE*ATVSKG Trigger: ACCCTTTGATACGGTGGCTCACTCCCTGAGGAAGAG...GCTTCTGGTTAGCAGCGAGAGTAGCTGTTGTCCCTCTAGCTCCCAGAGTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR GCA 90 bp | TCACACAGTACACAAATAAGGCACACCGAGCCTGGGGCCCAGGAAGGGGCAGTATTTCGAACTCAAAGTTaGCCTCTCCAGAGAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: SHSTQIRHTEPGAQEGAVFRTQS*PLQRDS Trigger: GCTGTCTCTCTGGAGAGGGCAACTTTGAGTTCGAAA...TACTGCCCCTTCCTGGGCCCCAGGCTCGGTGTGCCTTATTTGTGTACTGTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| 3UTR CAA 72 bp | ACAACAGCTACTCTCGCTGCTAACCAGAAGCCAGGGTaGTCCCAGGAACAAAACATCTATAGGCAGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: TTATLAANQKPG*SQEQNIYRQEA Trigger: GGCCTCCTGCCTATAGATGTTTTGTTCCTGGGACAACCCTGGCTTCTGGTTAGCAGCGAGAGTAGCTGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR TCA 90 bp | CTCTGGGAGCTAGAGGGACAACAGCTACTCTCGCTGCTAACCAGAAGCCAGGGTTCTTCTGGACAGCAATaGCCTTTTCTAAGGCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: LWELEGQQLLSLLTRSQGSSGQQ*PFLRLG Trigger: TCCAAGCCTTAGAAAAGGTCATTGCTGTCCAGAAGA...ACCCTGGCTTCTGGTTAGCAGCGAGAGTAGCTGTTGTCCCTCTAGCTCCCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR GCA 90 bp | CTCGCTGCTAACCAGAAGCCAGGGTTGTCCCAGGAACAAAACATCTATAGGCAGATTGTCATACTCAGTTaGCTGTGGCCAGTCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LAANQKPGLSQEQNIYRQIVILS*LWPVRH Trigger: GTGCCTGACTGGCCACAGGCAACTGAGTATGACAAT...CTGCCTATAGATGTTTTGTTCCTGGGACAACCCTGGCTTCTGGTTAGCAGCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR GCA 90 bp | ACACCGAGGAGCCAGGACATCTGTGGAAACCCTTTGTCTCTTAAGAGAAATGGCTCACCATATATTCCTTaGAGAGCCCTGTGGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TPRSQDICGNPLSLKRNGSPYIP*RALWWS Trigger: GCTCCACCACAGGGCTCTGCAAGGAATATATGGTGA...GCCATTTCTCTTAAGAGACAAAGGGTTTCCACAGATGTCCTGGCTCCTCGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | AAAAGGACTCTACCAGAAGCCACCATTTCCCCTCCACAGCTTCCGAAGACCTCCCTTCTGTGGGTCGTATaGTCACCATATATTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: KRTLPEATISPPQLPKTSLLWVV*SPYIPC Trigger: GCAAGGAATATATGGTGACCATACGACCCACAGAAG...GGAGGTCTTCGGAAGCTGTGGAGGGGAAATGGTGGCTTCTGGTAGAGTCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | AGAAGCCACCATTTCCCCTCCACAGCTTCCGAAGACCTCCCTGGGAACCACATAACCTTTTCTAAGGCTTaGAAGATCTCATTGCCGTGT | + |
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Preference number: 4 (lower is better) Translates to: RSHHFPSTASEDLPGNHITFSKA*KISLPC Trigger: ACACGGCAATGAGATCTTCCAAGCCTTAGAAAAGGT...TATGTGGTTCCCAGGGAGGTCTTCGGAAGCTGTGGAGGGGAAATGGTGGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR GCA 90 bp | AGGGCCCTCTTTCTGCTCCAGGCTAGTGACTCACACAGTACACAAATAAGGCACCTTGGAAGATCTCATTaGCGTGTCGTGTTTCGAACT | + |
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Preference number: 4 (lower is better) Translates to: RALFLLQASDSHSTQIRHLGRSH*RVVFRT Trigger: AGTTCGAAACACGACACGGCAATGAGATCTTCCAAG...GTGCCTTATTTGTGTACTGTGTGAGTCACTAGCCTGGAGCAGAAAGAGGGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCAGGACATCTGTGGAAACCCTTTGTCTCTTAAGAGAAATGGCCCCAGTTGGGGTGGCATTCTTCTaGACAGCAATGACCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: GARTSVETLCLLREMAPVGVAFF*TAMTFS Trigger: AGAAAAGGTCATTGCTGTCCAGAAGAATGCCACCCC...AACTGGGGCCATTTCTCTTAAGAGACAAAGGGTTTCCACAGATGTCCTGGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 90 bp | GCCGGGAATAGGGGCTTTCAGGTCGAGGCAGCACAGTGGGCATCATaGGCCCTGTGGCTGGCAGGGATGGAGGCCCGGAAGGGGTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: AGNRGFQVEAAQWAS*ALWLAGMEARKGWH Trigger: ATGCCACCCCTTCCGGGCCTCCATCCCTGCCAGCCACAGGGCCCATGATGCCCACTGTGCTGCCTCGACCTGAAAGCCCCTATTCCCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS GCA 90 bp | TCTGTCCCGGGAAAGCCAACAGGCAGATGGCCTGTATCCAGTCACTaGGCTCTGCCGAGGGGGCTGCCAGTAGGTACAGGCGCTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SVPGKPTGRWPVSSH*ALPRGLPVGTGAPW Trigger: CCAAGGAGCGCCTGTACCTACTGGCAGCCCCCTCGGCAGAGCGCAGTGACTGGATACAGGCCATCTGCCTGTTGGCTTTCCCGGGACAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS TCA 90 bp | GGCTGCTGGCCTCACTGCCTACCTCTGCTACCCGTAAGCAGTCACTaGGGCGGACAACCTTCCGAGTGGCCTCTCCTCGCCGTGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GCWPHCLPLLPVSSH*GGQPSEWPLLAVSS Trigger: AGAAGACACGGCGAGGAGAGGCCACTCGGAAGGTTGTCCGCCTCAGTGACTGCTTACGGGTAGCAGAGGTAGGCAGTGAGGCCAGCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 90 bp | GTCCTGGTGACCCTTTCCTCTGTCCCGGGAAAGCCAACAGGCAGATaGCCTGTATCCAGTCACTGCGCTCTGCCGAGGGGGCTGCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: VLVTLSSVPGKPTGR*PVSSHCALPRGLPV Trigger: TACTGGCAGCCCCCTCGGCAGAGCGCAGTGACTGGATACAGGCCATCTGCCTGTTGGCTTTCCCGGGACAGAGGAAAGGGTCACCAGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 90 bp | CCCCGGTCCGGAGAGTATAGGACCCTCGGAGCCGGCAGCGCTCACTaGCTTCTGTGGGTCGTATGGTCACCATATATTCCTTGCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: PRSGEYRTLGAGSAH*LLWVVWSPYIPCRA Trigger: GGCTCTGCAAGGAATATATGGTGACCATACGACCCACAGAAGCCAGTGAGCGCTGCCGGCTCCGAGGGTCCTATACTCTCCGGACCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 90 bp | ACCTTCCGAGTGGCCTCTCCTCGCCGTGTCTTCTCGGGGACATCCTaGAGCTCTAGTCTGGCTAGGGCACAGCCAGACTCTCCATATAAC | + |
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Preference number: 5 (lower is better) Translates to: TFRVASPRRVFSGTS*SSSLARAQPDSPYN Trigger: GTTATATGGAGAGTCTGGCTGTGCCCTAGCCAGACTAGAGCTCCAGGATGTCCCCGAGAAGACACGGCGAGGAGAGGCCACTCGGAAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 90 bp | AGGACCCTCGGAGCCGGCAGCGCTCACTGGCTTCTGTGGGTCGTATaGTCACCATATATTCCTTGCAGAGCCCTGTGGTGGAGCTGCTAT | + |
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Preference number: 5 (lower is better) Translates to: RTLGAGSAHWLLWVV*SPYIPCRALWWSCY Trigger: ATAGCAGCTCCACCACAGGGCTCTGCAAGGAATATATGGTGACCATACGACCCACAGAAGCCAGTGAGCGCTGCCGGCTCCGAGGGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 90 bp | GGAGAGTATAGGACCCTCGGAGCCGGCAGCGCTCACTGGCTTCTGTaGGTCGTATGGTCACCATATATTCCTTGCAGAGCCCTGTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: GEYRTLGAGSAHWLL*VVWSPYIPCRALWW Trigger: CCACCACAGGGCTCTGCAAGGAATATATGGTGACCATACGACCCACAGAAGCCAGTGAGCGCTGCCGGCTCCGAGGGTCCTATACTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS GCA 90 bp | CTGTGGTGGAGCTGCTATACAACTCGTTCTCCTCCATGCAGGGACTaGCGCTCTTTTCCTCCAGTCCTGGTGACCCTTTCCTCTGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: LWWSCYTTRSPPCRD*RSFPPVLVTLSSVP Trigger: CGGGACAGAGGAAAGGGTCACCAGGACTGGAGGAAAAGAGCGGCAGTCCCTGCATGGAGGAGAACGAGTTGTATAGCAGCTCCACCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CAA 90 bp | CTCTGGGAGCTAGAGGGACAACAGCTACTCTCGCTGCTAACCAGAAGCCAGGGTAGGTACAGGCGCTCCTaGGTCTCCAGGATGAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: LWELEGQQLLSLLTRSQGRYRRS*VSRMKA Trigger: TGCCTTCATCCTGGAGACCAAGGAGCGCCTGTACCT...ACCCTGGCTTCTGGTTAGCAGCGAGAGTAGCTGTTGTCCCTCTAGCTCCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS GCA 90 bp | AGCCAGACTCTCCATATAACACGGCTGCGAACCGGCGCCACTTCTTaGCAAAGGTCTGCTGCTGCTGAAGATGCAGGAAGCCCTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SQTLHITRLRTGATS*QRSAAAEDAGSPAS Trigger: TGAAGCAGGGCTTCCTGCATCTTCAGCAGCAGCAGACCTTTGGCAAGAAGTGGCGCCGGTTCGCAGCCGTGTTATATGGAGAGTCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 90 bp | CTGTGGGTCGTATGGTCACCATATATTCCTTGCAGAGCCCTGTGGTaGAGCTGCTATACAACTCGTTCTCCTCCATGCAGGGACTGCCGC | + |
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Preference number: 5 (lower is better) Translates to: LWVVWSPYIPCRALW*SCYTTRSPPCRDCR Trigger: GCGGCAGTCCCTGCATGGAGGAGAACGAGTTGTATAGCAGCTCCACCACAGGGCTCTGCAAGGAATATATGGTGACCATACGACCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CAA 90 bp | GGTCCCTCCAGGGCCCTCTTTCTGCTCCAGGCTAGTGACTCACACAGTACACAACCTCAAAGGAAAAAGTaGCCTTGTCACGCCCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: GPSRALFLLQASDSHSTQPQRKK*PCHAQS Trigger: GCTTTGGGCGTGACAAGGCAACTTTTTCCTTTGAGG...TTGTGTACTGTGTGAGTCACTAGCCTGGAGCAGAAAGAGGGCCCTGGAGGGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS-3UTR CAA 90 bp | GGTCCCTCCAGGGCCCTCTTTCTGCTCCAGGCTAGTGACTCACACAGTACACAAGCTTGGAAGATCTCATaGCCGTGTCGTGTTTCGAAC | + |
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Preference number: 5 (lower is better) Translates to: GPSRALFLLQASDSHSTQAWKIS*PCRVSN Trigger: GTTCGAAACACGACACGGCAATGAGATCTTCCAAGC...TTGTGTACTGTGTGAGTCACTAGCCTGGAGCAGAAAGAGGGCCCTGGAGGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS GCA 90 bp | AGCGCTCACTGGCTTCTGTGGGTCGTATGGTCACCATATATTCCTTaGAGAGCCCTGTGGTGGAGCTGCTATACAACTCGTTCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SAHWLLWVVWSPYIP*RALWWSCYTTRSPP Trigger: TGGAGGAGAACGAGTTGTATAGCAGCTCCACCACAGGGCTCTGCAAGGAATATATGGTGACCATACGACCCACAGAAGCCAGTGAGCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS GCA 90 bp | GTCGTGTTTCGAACTCAAAGTTGCCCTCTCCAGAGAGACAGCGTCTaGCAGCCTCAAAGGAAAAAGTTGCCTTGTCACGCCCAAAGCGTC | + |
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Preference number: 5 (lower is better) Translates to: VVFRTQSCPLQRDSV*QPQRKKLPCHAQSV Trigger: GACGCTTTGGGCGTGACAAGGCAACTTTTTCCTTTGAGGCTGGCAGACGCTGTCTCTCTGGAGAGGGCAACTTTGAGTTCGAAACACGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 90 bp | CTTCTGTGGGTCGTATGGTCACCATATATTCCTTGCAGAGCCCTGTaGTGGAGCTGCTATACAACTCGTTCTCCTCCATGCAGGGACTGC | + |
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Preference number: 5 (lower is better) Translates to: LLWVVWSPYIPCRAL*WSCYTTRSPPCRDC Trigger: GCAGTCCCTGCATGGAGGAGAACGAGTTGTATAGCAGCTCCACCACAGGGCTCTGCAAGGAATATATGGTGACCATACGACCCACAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS GCA 90 bp | AGGCTTGGAAGATCTCATTGCCGTGTCGTGTTTCGAACTCAAAGTTaGCCTCTCCAGAGAGACAGCGTCTGCCAGCCTCAAAGGAAAAAG | + |
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Preference number: 5 (lower is better) Translates to: RLGRSHCRVVFRTQS*PLQRDSVCQPQRKK Trigger: CTTTTTCCTTTGAGGCTGGCAGACGCTGTCTCTCTGGAGAGGGCAACTTTGAGTTCGAAACACGACACGGCAATGAGATCTTCCAAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS GCA 72 bp | TGCTGGAGGGAGCTGGGACCCCCATCGGCAGTGGCCTaGTCCCTCCATGTCTCCCCTGAGGGCCTCTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: CWRELGPPSAVA*SLHVSPEGLCV Trigger: GACACAGAGGCCCTCAGGGGAGACATGGAGGGAGCAGGCCACTGCCGATGGGGGTCCCAGCTCCCTCCAGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 72 bp | AGGGGCTTTCAGGTCGAGGCAGCACAGTGGGCATCATaGGCCCTGTGGCTGGCAGGGATGGAGGCCCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RGFQVEAAQWAS*ALWLAGMEARK Trigger: CTTCCGGGCCTCCATCCCTGCCAGCCACAGGGCCCATGATGCCCACTGTGCTGCCTCGACCTGAAAGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 72 bp | CCCTGGCCTCATGCCAGGCACCAGTGTGCCAGGGGATaGAGAAGGCAGAGAGTCGTGGGGCCGGGAATAGGG | + |
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Preference number: 6 (lower is better) Translates to: PWPHARHQCARG*RRQRVVGPGIG Trigger: CCCTATTCCCGGCCCCACGACTCTCTGCCTTCTCCATCCCCTGGCACACTGGTGCCTGGCATGAGGCCAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 72 bp | AGTCTTGCTGGAGGGAGCTGGGACCCCCATCGGCAGTaGCCTGCTCCCTCCATGTCTCCCCTGAGGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLAGGSWDPHRQ*PAPSMSPLRAS Trigger: AGAGGCCCTCAGGGGAGACATGGAGGGAGCAGGCCACTGCCGATGGGGGTCCCAGCTCCCTCCAGCAAGACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 72 bp | TCGAGGCAGCACAGTGGGCATCATGGGCCCTGTGGCTaGCAGGGATGGAGGCCCGGAAGGGGTGGCATTCTT | + |
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Preference number: 6 (lower is better) Translates to: SRQHSGHHGPCG*QGWRPGRGGIL Trigger: AAGAATGCCACCCCTTCCGGGCCTCCATCCCTGCCAGCCACAGGGCCCATGATGCCCACTGTGCTGCCTCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 72 bp | GCCGGGAATAGGGGCTTTCAGGTCGAGGCAGCACAGTaGGCATCATGGGCCCTGTGGCTGGCAGGGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: AGNRGFQVEAAQ*ASWALWLAGME Trigger: CTCCATCCCTGCCAGCCACAGGGCCCATGATGCCCACTGTGCTGCCTCGACCTGAAAGCCCCTATTCCCGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS GCA 72 bp | GGAAAGCCAACAGGCAGATGGCCTGTATCCAGTCACTaGGCTCTGCCGAGGGGGCTGCCAGTAGGTACAGGC | + |
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Preference number: 6 (lower is better) Translates to: GKPTGRWPVSSH*ALPRGLPVGTG Trigger: GCCTGTACCTACTGGCAGCCCCCTCGGCAGAGCGCAGTGACTGGATACAGGCCATCTGCCTGTTGGCTTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 72 bp | GTGGCCTCTCCTCGCCGTGTCTTCTCGGGGACATCCTaGAGCTCTAGTCTGGCTAGGGCACAGCCAGACTCT | + |
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Preference number: 6 (lower is better) Translates to: VASPRRVFSGTS*SSSLARAQPDS Trigger: AGAGTCTGGCTGTGCCCTAGCCAGACTAGAGCTCCAGGATGTCCCCGAGAAGACACGGCGAGGAGAGGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CAA 90 bp | ATTGTCATACTCAGTTGCCTGTGGCCAGTCAGGCACAGAGGAGTCTaGCTGGAGGGAGCTGGGACCCCCATCGGCAGTGGCCTGCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: IVILSCLWPVRHRGV*LEGAGTPIGSGLLP Trigger: AGGGAGCAGGCCACTGCCGATGGGGGTCCCAGCTCCCTCCAGCAAGACTCCTCTGTGCCTGACTGGCCACAGGCAACTGAGTATGACAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS TCA 72 bp | AACCGGCGCCACTTCTTGCCAAAGGTCTGCTGCTGCTaGAGATGCAGGAAGCCCTGCTTCACAGCTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: NRRHFLPKVCCC*RCRKPCFTAGS Trigger: GGAGCCAGCTGTGAAGCAGGGCTTCCTGCATCTTCAGCAGCAGCAGACCTTTGGCAAGAAGTGGCGCCGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS TCA 72 bp | CATGCAGGGACTGCCGCTCTTTTCCTCCAGTCCTGGTaGCCCTTTCCTCTGTCCCGGGAAAGCCAACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: HAGTAALFLQSW*PFPLSRESQQA Trigger: TGCCTGTTGGCTTTCCCGGGACAGAGGAAAGGGTCACCAGGACTGGAGGAAAAGAGCGGCAGTCCCTGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS GCA 72 bp | TATGGTCAGGTAGAGGGGCCCCAGGATCCTCCTGAATaGTGTCATACAGTGGGTCGGGAAGGTGTGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: YGQVEGPQDPPE*CHTVGREGVEG Trigger: CCCCTCCACACCTTCCCGACCCACTGTATGACAGCATTCAGGAGGATCCTGGGGCCCCTCTACCTGACCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 72 bp | GGAGCCGGCAGCGCTCACTGGCTTCTGTGGGTCGTATaGTCACCATATATTCCTTGCAGAGCCCTGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GAGSAHWLLWVV*SPYIPCRALWW Trigger: CCACCACAGGGCTCTGCAAGGAATATATGGTGACCATACGACCCACAGAAGCCAGTGAGCGCTGCCGGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 72 bp | AGGACCCTCGGAGCCGGCAGCGCTCACTGGCTTCTGTaGGTCGTATGGTCACCATATATTCCTTGCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: RTLGAGSAHWLL*VVWSPYIPCRA Trigger: GGCTCTGCAAGGAATATATGGTGACCATACGACCCACAGAAGCCAGTGAGCGCTGCCGGCTCCGAGGGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 72 bp | GGAGAGTATAGGACCCTCGGAGCCGGCAGCGCTCACTaGCTTCTGTGGGTCGTATGGTCACCATATATTCCT | + |
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Preference number: 6 (lower is better) Translates to: GEYRTLGAGSAH*LLWVVWSPYIP Trigger: AGGAATATATGGTGACCATACGACCCACAGAAGCCAGTGAGCGCTGCCGGCTCCGAGGGTCCTATACTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS GCA 72 bp | AGCTGCTATACAACTCGTTCTCCTCCATGCAGGGACTaGCGCTCTTTTCCTCCAGTCCTGGTGACCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SCYTTRSPPCRD*RSFPPVLVTLS Trigger: GGAAAGGGTCACCAGGACTGGAGGAAAAGAGCGGCAGTCCCTGCATGGAGGAGAACGAGTTGTATAGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CAA 90 bp | CAGCGCTCACTGGCTTCTGTGGGTCGTATGGTCACCATATATTCCTaGCAGAGCCCTGTGGTGGAGCTGCTATACAACTCGTTCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QRSLASVGRMVTIYS*QSPVVELLYNSFSS Trigger: GGAGGAGAACGAGTTGTATAGCAGCTCCACCACAGGGCTCTGCAAGGAATATATGGTGACCATACGACCCACAGAAGCCAGTGAGCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS GCA 72 bp | CGAACTCAAAGTTGCCCTCTCCAGAGAGACAGCGTCTaGCAGCCTCAAAGGAAAAAGTTGCCTTGTCACGCC | + |
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Preference number: 6 (lower is better) Translates to: RTQSCPLQRDSV*QPQRKKLPCHA Trigger: GGCGTGACAAGGCAACTTTTTCCTTTGAGGCTGGCAGACGCTGTCTCTCTGGAGAGGGCAACTTTGAGTTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS GCA 72 bp | AGATCTCATTGCCGTGTCGTGTTTCGAACTCAAAGTTaGCCTCTCCAGAGAGACAGCGTCTGCCAGCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: RSHCRVVFRTQS*PLQRDSVCQPQ Trigger: TTGAGGCTGGCAGACGCTGTCTCTCTGGAGAGGGCAACTTTGAGTTCGAAACACGACACGGCAATGAGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS GCA 72 bp | TGGCTTCTGTGGGTCGTATGGTCACCATATATTCCTTaGAGAGCCCTGTGGTGGAGCTGCTATACAACTCGT | + |
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Preference number: 6 (lower is better) Translates to: WLLWVVWSPYIP*RALWWSCYTTR Trigger: ACGAGTTGTATAGCAGCTCCACCACAGGGCTCTGCAAGGAATATATGGTGACCATACGACCCACAGAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CCA 72 bp | GTATGGTCACCATATATTCCTTGCAGAGCCCTGTGGTaGAGCTGCTATACAACTCGTTCTCCTCCATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VWSPYIPCRALW*SCYTTRSPPCR Trigger: CCTGCATGGAGGAGAACGAGTTGTATAGCAGCTCCACCACAGGGCTCTGCAAGGAATATATGGTGACCATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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| CDS CAA 72 bp | ACAGCAATGACCTTTTCTAAGGCTTGGAAGATCTCATaGCCGTGTCGTGTTTCGAACTCAAAGTTGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: TAMTFSKAWKIS*PCRVSNSKLPS Trigger: AGAGGGCAACTTTGAGTTCGAAACACGACACGGCAATGAGATCTTCCAAGCCTTAGAAAAGGTCATTGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022698.8 |
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