Pregenerated sensors for DOK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068335Ensembl transcript IDs: ENSMUST00000089651.6, ENSMUST00000149918.2, ENSMUST00000204900.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCACTGCCACGAGTGGTACCCGATTCGGGAAGGATCAAGCCCTGTaGCTTGGGGGCAGGAGCAGGCTTTGGGCTCCGGGGAGGTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: ATATSGTRFGKDQAL*LGGRSRLWAPGRWH Trigger: GTGCCACCTCCCCGGAGCCCAAAGCCTGCTCCTGCCCCCAAGCCACAGGGCTTGATCCTTCCCGAATCGGGTACCACTCGTGGCAGTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| 3UTR GCA 90 bp | TCTCCGTCTGCGCCAAAGCCCAGCCGCCTTTCGGAAAGGCGGTTCTaGATAAAGTCTGCACCCAGGCGGTGCTGGATACGGCGTCCGCCG | + |
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Preference number: 1 (lower is better) Translates to: SPSAPKPSRLSERRF*IKSAPRRCWIRRPP Trigger: CGGCGGACGCCGTATCCAGCACCGCCTGGGTGCAGACTTTATGCAGAACCGCCTTTCCGAAAGGCGGCTGGGCTTTGGCGCAGACGGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| 3UTR TCA 90 bp | AGAATGGAATTGTCACCTACAGCTACTCAACCTGGTAGCCCTCCCTaGCGGGTCATCCTCCCAGACAGCCCCATGCACCTTGTCCCGGCC | + |
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Preference number: 1 (lower is better) Translates to: RMELSPTATQPGSPP*RVILPDSPMHLVPA Trigger: GGCCGGGACAAGGTGCATGGGGCTGTCTGGGAGGATGACCCGTCAGGGAGGGCTACCAGGTTGAGTAGCTGTAGGTGACAATTCCATTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| 3UTR GCA 90 bp | CCCCTCTGTCTCCCCATCATGGGAGTCAGTTCTGAGGATATCCTGTaGCTGGCCCACCTTTCCTTGGGCTTTCTGCTGCTGGATGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: PLCLPIMGVSSEDIL*LAHLSLGFLLLDGS Trigger: GCTGCCATCCAGCAGCAGAAAGCCCAAGGAAAGGTGGGCCAGGCACAGGATATCCTCAGAACTGACTCCCATGATGGGGAGACAGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000149918.2 ENSMUST00000204900.2 |
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| 3UTR CCA 90 bp | TCTGTCTCCCCATCATGGGAGTCAGTTCTGAGGATATCCTGTGCCTaGCCCACCTTTCCTTGGGCTTTCTGCTGCTGGATGGCAGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: SVSPSWESVLRISCA*PTFPWAFCCWMAAS Trigger: TGAGGCTGCCATCCAGCAGCAGAAAGCCCAAGGAAAGGTGGGCCAGGCACAGGATATCCTCAGAACTGACTCCCATGATGGGGAGACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149918.2 ENSMUST00000204900.2 |
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| 3UTR CCA 90 bp | GAGAGTCCACAGTCCCAAGCCCCTGAGGTCCCACTTTTCTGGACCTaGCTGTACAGAGCTGTATCTGAGCTGAAGCCTTTGCTGCCACTG | + |
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Preference number: 1 (lower is better) Translates to: ESPQSQAPEVPLFWT*LYRAVSELKPLLPL Trigger: CAGTGGCAGCAAAGGCTTCAGCTCAGATACAGCTCTGTACAGCCAGGTCCAGAAAAGTGGGACCTCAGGGGCTTGGGACTGTGGACTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| 3UTR TCA 90 bp | TATCCCTCAGCCCTGTTTGTTCTACTCCTGGGACTGGTCATCCCTTaGCTCCTCTGGTCCCTGGCCCCTCCCACCCTACGGTTTCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: YPSALFVLLLGLVIP*LLWSLAPPTLRFLF Trigger: AAAAAGAAACCGTAGGGTGGGAGGGGCCAGGGACCAGAGGAGTCAAGGGATGACCAGTCCCAGGAGTAGAACAAACAGGGCTGAGGGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089651.6 ENSMUST00000149918.2 |
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| 3UTR CCA 90 bp | AAATATGTATCTGGCAAAGAACAAAACAAGAATGAAGATCCACACTaGTCTCCCCAAAGGGCACCCACTCAGACCAGTGGGCCGCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: KYVSGKEQNKNEDPH*SPQRAPTQTSGPLP Trigger: TGGAAGCGGCCCACTGGTCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTGTTCTTTGCCAGATACATATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089651.6 ENSMUST00000149918.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGGGGCTCCCCAGGGCCTATCCCTCAGCCCTGTTTGTTCTACTCCTGGGAGGACTGGTCATCCCTTaGCTCCTCTGGTCCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: LLGLPRAYPSALFVLLLGGLVIP*LLWSLA Trigger: GGCCAGGGACCAGAGGAGTCAAGGGATGACCAGTCC...TCCCAGGAGTAGAACAAACAGGGCTGAGGGATAGGCCCTGGGGAGCCCCAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089651.6 ENSMUST00000149918.2 |
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| 3UTR CAA 90 bp | ACAGTCACCGGCACCACGCTCACACATTCAGCCAGGCGTATCATCTaGCAGTCTAGACGGCGAGAGCCGCCTCGACCCCCTCTAGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: TVTGTTLTHSARRII*QSRRREPPRPPLEL Trigger: GAGCTCTAGAGGGGGTCGAGGCGGCTCTCGCCGTCTAGACTGCAAGATGATACGCCTGGCTGAATGTGTGAGCGTGGTGCCGGTGACTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| 3UTR-3UTR GCA 90 bp | TGCATAAAGTCTGCACCCAGGCGGTGCTGGATACGGCGTCCGCCGCCAGCAGGTCGGTTTCTTTTTCAGTaGCACCACCCCATTGGACCT | + |
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Preference number: 2 (lower is better) Translates to: CIKSAPRRCWIRRPPPAGRFLFQ*HHPIGP Trigger: AGGTCCAATGGGGTGGTGGCACTGAAAAAGAAACCG...ACCTGCTGGCGGCGGACGCCGTATCCAGCACCGCCTGGGTGCAGACTTTATGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| 3UTR-3UTR CCA 90 bp | CTACTCAACCTGGTAGCCCTCCCTGACGGGTCATCCTCCCAGACAGCCCCATGCAATGAAGATCCACACTaGTCTCCCCAAAGGGCACCC | + |
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Preference number: 2 (lower is better) Translates to: LLNLVALPDGSSSQTAPCNEDPH*SPQRAP Trigger: GGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCATT...GCATGGGGCTGTCTGGGAGGATGACCCGTCAGGGAGGGCTACCAGGTTGAGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCTAGTCCATCAGCTAGCCATCCTTAACGCTGCTGGGGCTCCCCAGGGCCTACGGTTTCTTTTTCAGTaGCACCACCCCATTGGACCT | + |
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Preference number: 2 (lower is better) Translates to: GLVHQLAILNAAGAPQGLRFLFQ*HHPIGP Trigger: AGGTCCAATGGGGTGGTGGCACTGAAAAAGAAACCG...TAGGCCCTGGGGAGCCCCAGCAGCGTTAAGGATGGCTAGCTGATGGACTAGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000089651.6 ENSMUST00000149918.2 |
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| 3UTR-3UTR GCA 90 bp | AACAAAACAAGAATGAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGATCCGCCGCCAGCAGGTaGGAGCGCTGTGCGGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: NKTRMKIHTGLPKGHPLRSAASR*ERCAVS Trigger: GGACACCGCACAGCGCTCGCACCTGCTGGCGGCGGA...TCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGACCAGTGGGCCGCTTTTCTACTCCTGGGACTaGTCATCCCTTGACTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: EDPHWSPQRAPTQTSGPLFYSWD*SSLDSS Trigger: AGAGGAGTCAAGGGATGACCAGTCCCAGGAGTAGAA...AAGCGGCCCACTGGTCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089651.6 ENSMUST00000149918.2 |
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| 3UTR-3UTR TCA 90 bp | AACAAAACAAGAATGAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGAGGACTGGTCATCCCTTaGCTCCTCTGGTCCCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: NKTRMKIHTGLPKGHPLRGLVIP*LLWSLA Trigger: GGCCAGGGACCAGAGGAGTCAAGGGATGACCAGTCC...TCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089651.6 ENSMUST00000149918.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAACAAGAATGAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGACCTGGGCTTTCTGCTGCTaGATGGCAGCCTCAACTGCC | + |
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Preference number: 2 (lower is better) Translates to: QNKNEDPHWSPQRAPTQTWAFCC*MAASTA Trigger: GGCAGTTGAGGCTGCCATCCAGCAGCAGAAAGCCCA...GGTCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| 3UTR-3UTR CCA 90 bp | AACAAAACAAGAATGAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGATTCTACTCCTGGGACTaGTCATCCCTTGACTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: NKTRMKIHTGLPKGHPLRFYSWD*SSLDSS Trigger: AGAGGAGTCAAGGGATGACCAGTCCCAGGAGTAGAA...TCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089651.6 ENSMUST00000149918.2 |
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| 3UTR CCA 72 bp | AGGCGGTTCTGCATAAAGTCTGCACCCAGGCGGTGCTaGATACGGCGTCCGCCGCCAGCAGGTGCGAGCGCT | + |
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Preference number: 3 (lower is better) Translates to: RRFCIKSAPRRC*IRRPPPAGASA Trigger: AGCGCTCGCACCTGCTGGCGGCGGACGCCGTATCCAGCACCGCCTGGGTGCAGACTTTATGCAGAACCGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| 3UTR GCA 72 bp | GAAAGGCGGTTCTGCATAAAGTCTGCACCCAGGCGGTaGTGGATACGGCGTCCGCCGCCAGCAGGTGCGAGC | + |
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Preference number: 3 (lower is better) Translates to: ERRFCIKSAPRR*WIRRPPPAGAS Trigger: GCTCGCACCTGCTGGCGGCGGACGCCGTATCCAGCACCGCCTGGGTGCAGACTTTATGCAGAACCGCCTTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| 3UTR CCA 72 bp | ACGAGTGGTACCCGATTCGGGAAGGATCAAGCCCTGTaGCTTGGGGGCAGGAGCAGGCTTTGGGCTCCGGGG | + |
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Preference number: 3 (lower is better) Translates to: TSGTRFGKDQAL*LGGRSRLWAPG Trigger: CCCCGGAGCCCAAAGCCTGCTCCTGCCCCCAAGCCACAGGGCTTGATCCTTCCCGAATCGGGTACCACTCGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| 3UTR CCA 72 bp | ACACTGGTCTCCCCAAAGGGCACCCACTCAGACCAGTaGGCCGCTTCCATAGGCCTAGTCCATCAGCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: TLVSPKGTHSDQ*AASIGLVHQLA Trigger: GGCTAGCTGATGGACTAGGCCTATGGAAGCGGCCCACTGGTCTGAGTGGGTGCCCTTTGGGGAGACCAGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089651.6 ENSMUST00000149918.2 |
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| 3UTR CCA 72 bp | CCTATCCCTCAGCCCTGTTTGTTCTACTCCTGGGACTaGTCATCCCTTGACTCCTCTGGTCCCTGGCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: PIPQPCLFYSWD*SSLDSSGPWPL Trigger: GAGGGGCCAGGGACCAGAGGAGTCAAGGGATGACCAGTCCCAGGAGTAGAACAAACAGGGCTGAGGGATAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089651.6 ENSMUST00000149918.2 |
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| 3UTR CCA 72 bp | GTTCTGAGGATATCCTGTGCCTGGCCCACCTTTCCTTaGGCTTTCTGCTGCTGGATGGCAGCCTCAACTGCC | + |
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Preference number: 3 (lower is better) Translates to: VLRISCAWPTFP*AFCCWMAASTA Trigger: GGCAGTTGAGGCTGCCATCCAGCAGCAGAAAGCCCAAGGAAAGGTGGGCCAGGCACAGGATATCCTCAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000149918.2 ENSMUST00000204900.2 |
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| 3UTR TCA 72 bp | TCTTCCCCTCTGTCTCCCCATCATGGGAGTCAGTTCTaGGGATATCCTGTGCCTGGCCCACCTTTCCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: SSPLSPHHGSQF*GYPVPGPPFLG Trigger: CCCAAGGAAAGGTGGGCCAGGCACAGGATATCCTCAGAACTGACTCCCATGATGGGGAGACAGAGGGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000149918.2 ENSMUST00000204900.2 |
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| 3UTR CCA 72 bp | CCATCATGGGAGTCAGTTCTGAGGATATCCTGTGCCTaGCCCACCTTTCCTTGGGCTTTCTGCTGCTGGATG | + |
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Preference number: 3 (lower is better) Translates to: PSWESVLRISCA*PTFPWAFCCWM Trigger: CATCCAGCAGCAGAAAGCCCAAGGAAAGGTGGGCCAGGCACAGGATATCCTCAGAACTGACTCCCATGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000149918.2 ENSMUST00000204900.2 |
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| 3UTR CCA 72 bp | TCTGGCAAAGAACAAAACAAGAATGAAGATCCACACTaGTCTCCCCAAAGGGCACCCACTCAGACCAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: SGKEQNKNEDPH*SPQRAPTQTSG Trigger: CCCACTGGTCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTGTTCTTTGCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089651.6 ENSMUST00000149918.2 |
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| CDS-3UTR CCA 90 bp | GGCCTAGTCCATCAGCTAGCCATCCTTAACGCTGCTGGGGCTCCCCAGGGCCTAAAGGATCAAGCCCTGTaGCTTGGGGGCAGGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GLVHQLAILNAAGAPQGLKDQAL*LGGRSR Trigger: CCTGCTCCTGCCCCCAAGCCACAGGGCTTGATCCTT...TAGGCCCTGGGGAGCCCCAGCAGCGTTAAGGATGGCTAGCTGATGGACTAGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR TCA 90 bp | GAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGACCAGTGGGCCGCTTGAGAAGTCTGGAAGGTaGAGGTCCCAGGGCCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: EDPHWSPQRAPTQTSGPLEKSGR*RSQGLR Trigger: CCTCAGGCCCTGGGACCTTCACCTTCCAGACTTCTC...AAGCGGCCCACTGGTCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CCA 90 bp | TGCTGGGGCTCCCCAGGGCCTATCCCTCAGCCCTGTTTGTTCTACTCCTGGGACGCCGTGAGGACTGGCTaGGTAAAGCACAGCCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: CWGSPGPIPQPCLFYSWDAVRTG*VKHSPS Trigger: ACTTGGGCTGTGCTTTACCCAGCCAGTCCTCACGGC...GTCCCAGGAGTAGAACAAACAGGGCTGAGGGATAGGCCCTGGGGAGCCCCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089651.6 ENSMUST00000149918.2 |
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| CDS-3UTR CCA 90 bp | CTGCTGGGGCTCCCCAGGGCCTATCCCTCAGCCCTGTTTGTTCTACTCCTGGGAGCCGTGAGGACTGGCTaGGTAAAGCACAGCCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LLGLPRAYPSALFVLLLGAVRTG*VKHSPS Trigger: ACTTGGGCTGTGCTTTACCCAGCCAGTCCTCACGGC...TCCCAGGAGTAGAACAAACAGGGCTGAGGGATAGGCCCTGGGGAGCCCCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089651.6 ENSMUST00000149918.2 |
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| CDS-3UTR CCA 90 bp | ATGAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGACCAGTGGGCCGCTCAAGCCCTGTGGCTTaGGGGCAGGAGCAGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: MKIHTGLPKGHPLRPVGRSSPVA*GQEQAL Trigger: CAAAGCCTGCTCCTGCCCCCAAGCCACAGGGCTTGA...GCGGCCCACTGGTCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| 3UTR CAA 72 bp | AGCCCTGTTTGTTCTACTCCTGGGACTGGTCATCCCTaGACTCCTCTGGTCCCTGGCCCCTCCCACCCTACG | + |
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Preference number: 4 (lower is better) Translates to: SPVCSTPGTGHP*TPLVPGPSHPT Trigger: CGTAGGGTGGGAGGGGCCAGGGACCAGAGGAGTCAAGGGATGACCAGTCCCAGGAGTAGAACAAACAGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089651.6 ENSMUST00000149918.2 |
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| 3UTR CAA 72 bp | TGCTGGGGCTCCCCAGGGCCTATCCCTCAGCCCTGTTaGTTCTACTCCTGGGACTGGTCATCCCTTGACTCC | + |
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Preference number: 4 (lower is better) Translates to: CWGSPGPIPQPC*FYSWDWSSLDS Trigger: GGAGTCAAGGGATGACCAGTCCCAGGAGTAGAACAAACAGGGCTGAGGGATAGGCCCTGGGGAGCCCCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089651.6 ENSMUST00000149918.2 |
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| CDS-3UTR GCA 90 bp | TACTCCTGGGACTGGTCATCCCTTGACTCCTCTGGTCCCTGGCCCCTCCCACCCTTTCCTTGGGCTTTCTaGTGCTGGATGGCAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: YSWDWSSLDSSGPWPLPPFPWAF*CWMAAS Trigger: TGAGGCTGCCATCCAGCAGCAGAAAGCCCAAGGAAA...GGGTGGGAGGGGCCAGGGACCAGAGGAGTCAAGGGATGACCAGTCCCAGGAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CCA 90 bp | TGCTGGGGCTCCCCAGGGCCTATCCCTCAGCCCTGTTTGTTCTACTCCTGGGACCTTTCTGCTGCTGGATaGCAGCCTCAACTGCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: CWGSPGPIPQPCLFYSWDLSAAG*QPQLPE Trigger: TTCAGGCAGTTGAGGCTGCCATCCAGCAGCAGAAAG...GTCCCAGGAGTAGAACAAACAGGGCTGAGGGATAGGCCCTGGGGAGCCCCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CCA 90 bp | GCCCAGCCGCCTTTCGGAAAGGCGGTTCTGCATAAAGTCTGCACCCAGGCGGTGAGTTTTCCTCCACCTTaGTCCCGAAGCGCTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: AQPPFGKAVLHKVCTQAVSFPPP*SRSADS Trigger: AGAGTCAGCGCTTCGGGACCAAGGTGGAGGAAAACT...CACCGCCTGGGTGCAGACTTTATGCAGAACCGCCTTTCCGAAAGGCGGCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| CDS-3UTR TCA 90 bp | TACTCCTGGGACTGGTCATCCCTTGACTCCTCTGGTCCCTGGCCCCTCCCACCCGAATATACAGAGTCCTaGGAAGGGCCTGGAGGAATT | + |
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Preference number: 4 (lower is better) Translates to: YSWDWSSLDSSGPWPLPPEYTES*EGPGGI Trigger: AATTCCTCCAGGCCCTTCTCAGGACTCTGTATATTC...GGGTGGGAGGGGCCAGGGACCAGAGGAGTCAAGGGATGACCAGTCCCAGGAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CCA 90 bp | ATGAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGACCAGTGGGCCGCTTTTCCTCCACCTCTTaGTCCCGAAGCGCTGACTCT | + |
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Preference number: 4 (lower is better) Translates to: MKIHTGLPKGHPLRPVGRFSSTS*SRSADS Trigger: AGAGTCAGCGCTTCGGGACCAAGAGGTGGAGGAAAA...GCGGCCCACTGGTCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CCA 90 bp | ACTCCTGGGACTGGTCATCCCTTGACTCCTCTGGTCCCTGGCCCCTCCCACCCTTCTGTCTCCCCATCATaGGAGTCAGTTCTGAGGATA | + |
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Preference number: 4 (lower is better) Translates to: TPGTGHPLTPLVPGPSHPSVSPS*ESVLRI Trigger: TATCCTCAGAACTGACTCCCATGATGGGGAGACAGA...AGGGTGGGAGGGGCCAGGGACCAGAGGAGTCAAGGGATGACCAGTCCCAGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CCA 90 bp | CAAAACAAGAATGAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGACCCTGCCCAGGGGGTCCTaGGGAACAGGAGGGGGAACT | + |
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Preference number: 4 (lower is better) Translates to: QNKNEDPHWSPQRAPTQTLPRGS*GTGGGT Trigger: AGTTCCCCCTCCTGTTCCCCAGGACCCCCTGGGCAG...GGTCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR GCA 90 bp | AAAGAACAAAACAAGAATGAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTTCCGCCGCCAGCAGGTaGGAGCGCTGTGCGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: KEQNKNEDPHWSPQRAPTSAASR*ERCAVS Trigger: GGACACCGCACAGCGCTCGCACCTGCTGGCGGCGGA...AGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTGTTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR GCA 90 bp | TCCTTAACGCTGCTGGGGCTCCCCAGGGCCTATCCCTCAGCCCTGTTTGTTCTATCTGAGGATATCCTGTaGCTGGCCCACCTTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SLTLLGLPRAYPSALFVLSEDIL*LAHLSL Trigger: CAAGGAAAGGTGGGCCAGGCACAGGATATCCTCAGA...TAGAACAAACAGGGCTGAGGGATAGGCCCTGGGGAGCCCCAGCAGCGTTAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CCA 90 bp | GTCTTCCCCTCTGTCTCCCCATCATGGGAGTCAGTTCTGAGGATATCCTGTGCCGAGGTTACCCAGAACTaGGATCCTTCCCAGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: VFPSVSPSWESVLRISCAEVTQN*DPSQVG Trigger: CCCCACCTGGGAAGGATCCCAGTTCTGGGTAACCTC...GGCACAGGATATCCTCAGAACTGACTCCCATGATGGGGAGACAGAGGGGAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204900.2 |
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| 3UTR CAA 72 bp | AGTTCTGAGGATATCCTGTGCCTGGCCCACCTTTCCTaGGGCTTTCTGCTGCTGGATGGCAGCCTCAACTGC | + |
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Preference number: 4 (lower is better) Translates to: SSEDILCLAHLS*GFLLLDGSLNC Trigger: GCAGTTGAGGCTGCCATCCAGCAGCAGAAAGCCCAAGGAAAGGTGGGCCAGGCACAGGATATCCTCAGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000149918.2 ENSMUST00000204900.2 |
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| 3UTR CAA 72 bp | ACCTGGCTGTACAGAGCTGTATCTGAGCTGAAGCCTTaGCTGCCACTGCCACGAGTGGTACCCGATTCGGGA | + |
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Preference number: 4 (lower is better) Translates to: TWLYRAVSELKP*LPLPRVVPDSG Trigger: TCCCGAATCGGGTACCACTCGTGGCAGTGGCAGCAAAGGCTTCAGCTCAGATACAGCTCTGTACAGCCAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| CDS-3UTR CCA 90 bp | ATGAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGACCAGTGGGCCGCAATAGAGAGGTTTCTTaGAATGCACCCCTTCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: MKIHTGLPKGHPLRPVGRNREVS*NAPLPL Trigger: CAGGGGAAGGGGTGCATTCCAAGAAACCTCTCTATT...GCGGCCCACTGGTCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CCA 90 bp | GAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGACCAGTGGGCCGCTTAGATGGGGTCCTCTTTaGAGTCTGTCAGCTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: EDPHWSPQRAPTQTSGPLRWGPL*SLSAWF Trigger: AAACCAAGCTGACAGACTCCAAAGAGGACCCCATCT...AAGCGGCCCACTGGTCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR GCA 90 bp | GAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGACCAGTGGGCCGCTTTTCAGTAACTGCTGCTaGACATGCCCATACAAATCC | + |
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Preference number: 4 (lower is better) Translates to: EDPHWSPQRAPTQTSGPLFSNCC*TCPYKS Trigger: GGATTTGTATGGGCATGTGCAGCAGCAGTTACTGAA...AAGCGGCCCACTGGTCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR GCA 90 bp | GTATCTGGCAAAGAACAAAACAAGAATGAAGATCCACACTGGTCTCCCCAAAGGATAGGGCTGGAGGGCTaGCCAGGGGGTCCTGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: VSGKEQNKNEDPHWSPQRIGLEG*PGGPGE Trigger: TTCCCCAGGACCCCCTGGGCAGCCCTCCAGCCCTAT...CCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTGTTCTTTGCCAGATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CCA 90 bp | CAAAACAAGAATGAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGACCAGGATATCCTGTGCCTaGCCCACCTTTCCTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QNKNEDPHWSPQRAPTQTRISCA*PTFPWA Trigger: AGCCCAAGGAAAGGTGGGCCAGGCACAGGATATCCT...GGTCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CCA 90 bp | CCACTCAGACCAGTGGGCCGCTTCCATAGGCCTAGTCCATCAGCTAGCCATCCTTGGAGTCTGTCAGCTTaGTTTTCAGTAACTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PLRPVGRFHRPSPSASHPWSLSA*FSVTAA Trigger: AGCAGCAGTTACTGAAAACCAAGCTGACAGACTCCA...AGGATGGCTAGCTGATGGACTAGGCCTATGGAAGCGGCCCACTGGTCTGAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| 3UTR CAA 72 bp | TCCTATCAGCAACTGTCTCAGGTGGAACCCTCAGACTaGACCCCCGCCCTGTCATTCCCTACTTTAGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: SYQQLSQVEPSD*TPALSFPTLES Trigger: ACTCTCTAAAGTAGGGAATGACAGGGCGGGGGTCAAGTCTGAGGGTTCCACCTGAGACAGTTGCTGATAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149918.2 |
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| CDS-3UTR TCA 90 bp | CAAAACAAGAATGAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGACCGTACAGAGCTGTATCTaGGCTGAAGCCTTTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QNKNEDPHWSPQRAPTQTVQSCI*AEAFAA Trigger: GGCAGCAAAGGCTTCAGCTCAGATACAGCTCTGTAC...GGTCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CCA 90 bp | AAAGAACAAAACAAGAATGAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTGAGGTTACCCAGAACTaGGATCCTTCCCAGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: KEQNKNEDPHWSPQRAPTEVTQN*DPSQVG Trigger: CCCCACCTGGGAAGGATCCCAGTTCTGGGTAACCTC...AGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTGTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CCA 90 bp | AACAAAACAAGAATGAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGATGGCCCACCTTTCCTTaGGCTTTCTGCTGCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: NKTRMKIHTGLPKGHPLRWPTFP*AFCCWM Trigger: CATCCAGCAGCAGAAAGCCCAAGGAAAGGTGGGCCA...TCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CCA 90 bp | GTATCTGGCAAAGAACAAAACAAGAATGAAGATCCACACTGGTCTCCCCAAAGGGTCCTGAGAAGGGCCTaGAGGAATTCGCAAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: VSGKEQNKNEDPHWSPQRVLRRA*RNSQGV Trigger: GACTCCTTGCGAATTCCTCCAGGCCCTTCTCAGGAC...CCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTGTTCTTTGCCAGATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR TCA 90 bp | ATGTATCTGGCAAAGAACAAAACAAGAATGAAGATCCACACTGGTCTCCCCAAAGAGCTGTATCTGAGCTaGAGCCTTTGCTGCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: MYLAKNKTRMKIHTGLPKELYLS*SLCCHC Trigger: GCAGTGGCAGCAAAGGCTTCAGCTCAGATACAGCTC...TTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTGTTCTTTGCCAGATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR GCA 90 bp | AACAAAACAAGAATGAAGATCCACACTGGTCTCCCCAAAGGGCACCCACTCAGATTGGTTTTCAGTAACTaGTGCTGCACATGCCCATAC | + |
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Preference number: 4 (lower is better) Translates to: NKTRMKIHTGLPKGHPLRLVFSN*CCTCPY Trigger: GTATGGGCATGTGCAGCAGCAGTTACTGAAAACCAA...TCTGAGTGGGTGCCCTTTGGGGAGACCAGTGTGGATCTTCATTCTTGTTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CAA 90 bp | GGTCTCCCCAAAGGGCACCCACTCAGACCAGTGGGCCGCTTCCATAGGCCTAGTGGGCAGGAGCAGGCTTaGGGCTCCGGGGAGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: GLPKGHPLRPVGRFHRPSGQEQA*GSGEVA Trigger: TGCCACCTCCCCGGAGCCCAAAGCCTGCTCCTGCCC...ACTAGGCCTATGGAAGCGGCCCACTGGTCTGAGTGGGTGCCCTTTGGGGAGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CAA 90 bp | CCACTCAGACCAGTGGGCCGCTTCCATAGGCCTAGTCCATCAGCTAGCCATCCTCTGGCCCACCTTTCCTaGGGCTTTCTGCTGCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: PLRPVGRFHRPSPSASHPLAHLS*GFLLLD Trigger: ATCCAGCAGCAGAAAGCCCAAGGAAAGGTGGGCCAG...AGGATGGCTAGCTGATGGACTAGGCCTATGGAAGCGGCCCACTGGTCTGAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS-3UTR CAA 90 bp | TCCTTAACGCTGCTGGGGCTCCCCAGGGCCTATCCCTCAGCCCTGTTTGTTCTATCTGAGCTGAAGCCTTaGCTGCCACTGCCACGAGTG | + |
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Preference number: 5 (lower is better) Translates to: SLTLLGLPRAYPSALFVLSELKP*LPLPRV Trigger: CACTCGTGGCAGTGGCAGCAAAGGCTTCAGCTCAGA...TAGAACAAACAGGGCTGAGGGATAGGCCCTGGGGAGCCCCAGCAGCGTTAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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| CDS TCA 72 bp | GCCCAAGTTTTCCTCCACCTCTTGGTCCCGAAGCGCTaGCTCTGCAGAAAAAGCGGACCCTCCATCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: AQVFLHLLVPKR*LCRKSGPSITA Trigger: GGCTGTGATGGAGGGTCCGCTTTTTCTGCAGAGTCAGCGCTTCGGGACCAAGAGGTGGAGGAAAACTTGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089651.6 |
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