Pregenerated sensors for DOHH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078440Ensembl transcript IDs: ENSMUST00000072751.13, ENSMUST00000121047.2, ENSMUST00000142346.8
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCAAGGAGGTGAGGCGAGTGGGACACAGGGCCCCTCAGCTGCTCTaGTCCCTAAATCTGGATGTGAGGCACAGCACACATGGCCGGGGC | + |
|
Preference number: 1 (lower is better) Translates to: SKEVRRVGHRAPQLL*SLNLDVRHSTHGRG Trigger: GCCCCGGCCATGTGTGCTGTGCCTCACATCCAGATTTAGGGAGCAGAGCAGCTGAGGGGCCCTGTGTCCCACTCGCCTCACCTCCTTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| 3UTR CCA 90 bp | AGACCACTATGGTTAGGCAGCCAGGTAAAGTCCCCAGGGTTTGTGTaGGGCACCTGGATGGGGAGAAGGTGGCCCTGGGACAGCTGCCCC | + |
|
Preference number: 1 (lower is better) Translates to: RPLWLGSQVKSPGFV*GTWMGRRWPWDSCP Trigger: GGGGCAGCTGTCCCAGGGCCACCTTCTCCCCATCCAGGTGCCCCACACAAACCCTGGGGACTTTACCTGGCTGCCTAACCATAGTGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| 3UTR GCA 90 bp | CCCCCACAACTTTCCCAACCCTGCAAGCGTCTGCACTGCCACCTCTaGTGGTGGAGGGCATGGGAGACACAGAACCACAGAGCAGACAGC | + |
|
Preference number: 1 (lower is better) Translates to: PPQLSQPCKRLHCHL*WWRAWETQNHRADS Trigger: GCTGTCTGCTCTGTGGTTCTGTGTCTCCCATGCCCTCCACCAGCAGAGGTGGCAGTGCAGACGCTTGCAGGGTTGGGAAAGTTGTGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| 3UTR CCA 90 bp | CCACAACTTTCCCAACCCTGCAAGCGTCTGCACTGCCACCTCTGCTaGTGGAGGGCATGGGAGACACAGAACCACAGAGCAGACAGCACC | + |
|
Preference number: 1 (lower is better) Translates to: PQLSQPCKRLHCHLC*WRAWETQNHRADST Trigger: GGTGCTGTCTGCTCTGTGGTTCTGTGTCTCCCATGCCCTCCACCAGCAGAGGTGGCAGTGCAGACGCTTGCAGGGTTGGGAAAGTTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCAAGCGTCTGCACTGCCACCTCTGCTGGTGGAGGGCATGGGAGACACAGAGAGGCACAGCACACATaGCCGGGGCCAGGGCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PASVCTATSAGGGHGRHREAQHT*PGPGQQ Trigger: CTGCTGCCCTGGCCCCGGCCATGTGTGCTGTGCCTC...TCTGTGTCTCCCATGCCCTCCACCAGCAGAGGTGGCAGTGCAGACGCTTGCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| 3UTR-3UTR CCA 90 bp | GGAGAGCTGGGCAGGAAACAGTGGGCACATAGGGTCCCAAGGAAGGGACACACCTGGATGGGGAGAAGGTaGCCCTGGGACAGCTGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: GELGRKQWAHRVPRKGHTWMGRR*PWDSCP Trigger: GGGGCAGCTGTCCCAGGGCCACCTTCTCCCCATCCA...GGTGTGTCCCTTCCTTGGGACCCTATGTGCCCACTGTTTCCTGCCCAGCTCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| 3UTR CAA 90 bp | TGTACTCCCTGCTTGACCCAGATGGGAGGTGTACCCCACACACCCTaGCCCCCACAACTTTCCCAACCCTGCAAGCGTCTGCACTGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: CTPCLTQMGGVPHTP*PPQLSQPCKRLHCH Trigger: GTGGCAGTGCAGACGCTTGCAGGGTTGGGAAAGTTGTGGGGGCAAGGGTGTGTGGGGTACACCTCCCATCTGGGTCAAGCAGGGAGTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| 3UTR-3UTR CCA 90 bp | ATGGGAGGTGTACCCCACACACCCTTGCCCCCACAACTTTCCCAACCCTGCAAGTGCCACCTCTGCTGGTaGAGGGCATGGGAGACACAG | + |
|
Preference number: 2 (lower is better) Translates to: MGGVPHTPLPPQLSQPCKCHLCW*RAWETQ Trigger: CTGTGTCTCCCATGCCCTCCACCAGCAGAGGTGGCA...CTTGCAGGGTTGGGAAAGTTGTGGGGGCAAGGGTGTGTGGGGTACACCTCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| 3UTR-3UTR CCA 90 bp | CTTGACCCAGATGGGAGGTGTACCCCACACACCCTTGCCCCCACAACTTTCCCATGCTGGTGGAGGGCATaGGAGACACAGAACCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: LDPDGRCTPHTLAPTTFPCWWRA*ETQNHR Trigger: TCTGTGGTTCTGTGTCTCCCATGCCCTCCACCAGCA...TGGGAAAGTTGTGGGGGCAAGGGTGTGTGGGGTACACCTCCCATCTGGGTCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| 3UTR GCA 72 bp | CCCCCACAACTTTCCCAACCCTGCAAGCGTCTGCACTaGCACCTCTGCTGGTGGAGGGCATGGGAGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: PPQLSQPCKRLH*HLCWWRAWETQ Trigger: CTGTGTCTCCCATGCCCTCCACCAGCAGAGGTGGCAGTGCAGACGCTTGCAGGGTTGGGAAAGTTGTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| 3UTR CCA 72 bp | TGGTTAGGCAGCCAGGTAAAGTCCCCAGGGTTTGTGTaGGGCACCTGGATGGGGAGAAGGTGGCCCTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: WLGSQVKSPGFV*GTWMGRRWPWD Trigger: GTCCCAGGGCCACCTTCTCCCCATCCAGGTGCCCCACACAAACCCTGGGGACTTTACCTGGCTGCCTAACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| 3UTR CCA 72 bp | TCCCAACCCTGCAAGCGTCTGCACTGCCACCTCTGCTaGTGGAGGGCATGGGAGACACAGAACCACAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SQPCKRLHCHLC*WRAWETQNHRA Trigger: TGCTCTGTGGTTCTGTGTCTCCCATGCCCTCCACCAGCAGAGGTGGCAGTGCAGACGCTTGCAGGGTTGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| 3UTR GCA 72 bp | GTGAGGCGAGTGGGACACAGGGCCCCTCAGCTGCTCTaGTCCCTAAATCTGGATGTGAGGCACAGCACACAT | + |
|
Preference number: 3 (lower is better) Translates to: VRRVGHRAPQLL*SLNLDVRHSTH Trigger: ATGTGTGCTGTGCCTCACATCCAGATTTAGGGAGCAGAGCAGCTGAGGGGCCCTGTGTCCCACTCGCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| 3UTR CCA 72 bp | ATAGGGTCCCAAGGAAGGGACACACCAAGACCACTATaGTTAGGCAGCCAGGTAAAGTCCCCAGGGTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: IGSQGRDTPRPL*LGSQVKSPGFV Trigger: CACAAACCCTGGGGACTTTACCTGGCTGCCTAACCATAGTGGTCTTGGTGTGTCCCTTCCTTGGGACCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGCAAGCGTCTGCACTGCCACCTCTGCTGGTGGAGGGCATGGGAGACACAGCGGGCCTGCAGGGGCTaGTTGGGGTCCACCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PCKRLHCHLCWWRAWETQRACRG*LGSTKV Trigger: GACCTTGGTGGACCCCAAGCAGCCCCTGCAGGCCCG...CTGTGTCTCCCATGCCCTCCACCAGCAGAGGTGGCAGTGCAGACGCTTGCAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR GCA 90 bp | CAGCTGCTCTGCTCCCTAAATCTGGATGTGAGGCACAGCACACATGGCCGGGGCGCCCGGAAGCGGGCCTaGAGGGGCTGCTTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLLCSLNLDVRHSTHGRGARKRA*RGCLGS Trigger: GGACCCCAAGCAGCCCCTGCAGGCCCGCTTCCGGGC...GCCCCGGCCATGTGTGCTGTGCCTCACATCCAGATTTAGGGAGCAGAGCAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR GCA 90 bp | TGGTTAGGCAGCCAGGTAAAGTCCCCAGGGTTTGTGTGGGGCACCTGGATGGGGGCCCGGAAGCGGGCCTaGAGGGGCTGCTTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WLGSQVKSPGFVWGTWMGARKRA*RGCLGS Trigger: GGACCCCAAGCAGCCCCTGCAGGCCCGCTTCCGGGC...CCCCATCCAGGTGCCCCACACAAACCCTGGGGACTTTACCTGGCTGCCTAACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTCTGCTCCCTAAATCTGGATGTGAGGCACAGCACACATGGCCGGGGCCAAGGCAGGTCTGGCGATaGCACCCAGGGCCTCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: AALLPKSGCEAQHTWPGPRQVWR*HPGPLR Trigger: GCGCAGAGGCCCTGGGTGCCATCGCCAGACCTGCCT...TGGCCCCGGCCATGTGTGCTGTGCCTCACATCCAGATTTAGGGAGCAGAGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR TCA 90 bp | CCCAGATGGGAGGTGTACCCCACACACCCTTGCCCCCACAACTTTCCCAACCCTGCTTCCCCTGCCTCATaGCGCACCATGGGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRWEVYPTHPCPHNFPNPASPAS*RTMGSW Trigger: CCAGGAGCCCATGGTGCGTCATGAGGCAGGGGAAGC...AGGGTTGGGAAAGTTGTGGGGGCAAGGGTGTGTGGGGTACACCTCCCATCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR GCA 90 bp | CTGCAAGCGTCTGCACTGCCACCTCTGCTGGTGGAGGGCATGGGAGACACAGAACCCCACATCCTGCTCTaGTGCAGGGGGTGCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LQASALPPLLVEGMGDTEPHILL*CRGCWV Trigger: GACCCAGCACCCCCTGCAGCAGAGCAGGATGTGGGG...TTCTGTGTCTCCCATGCCCTCCACCAGCAGAGGTGGCAGTGCAGACGCTTGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR GCA 90 bp | GGGAGGTGTACCCCACACACCCTTGCCCCCACAACTTTCCCAACCCTGCAAGCGGCCTCTGCGCACTCGTaGCGCACCATGGGACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRCTPHTLAPTTFPTLQAASAHS*RTMGLS Trigger: TGAGAGTCCCATGGTGCGGCACGAGTGCGCAGAGGC...CGCTTGCAGGGTTGGGAAAGTTGTGGGGGCAAGGGTGTGTGGGGTACACCTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR GCA 90 bp | CTTGACCCAGATGGGAGGTGTACCCCACACACCCTTGCCCCCACAACTTTCCCAGGCACCCAGGGCCTCTaGGCACTCGTGCCGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LDPDGRCTPHTLAPTTFPGTQGL*ALVPHH Trigger: ATGGTGCGGCACGAGTGCGCAGAGGCCCTGGGTGCC...TGGGAAAGTTGTGGGGGCAAGGGTGTGTGGGGTACACCTCCCATCTGGGTCAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR CCA 90 bp | CAACTTTCCCAACCCTGCAAGCGTCTGCACTGCCACCTCTGCTGGTGGAGGGCAAGGGTCCTGCACATGTaGCCTCCCCCGGGTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLSQPCKRLHCHLCWWRARVLHM*PPPGAA Trigger: AGCAGCACCCGGGGGAGGCCACATGTGCAGGACCCT...TGCCCTCCACCAGCAGAGGTGGCAGTGCAGACGCTTGCAGGGTTGGGAAAGTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR GCA 90 bp | CCCTCAGCTGCTCTGCTCCCTAAATCTGGATGTGAGGCACAGCACACATGGCCGCCCCAGGGCTTCCCCTaGCTCATGACGCACCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSAALLPKSGCEAQHTWPPQGFP*LMTHHG Trigger: CCCATGGTGCGTCATGAGGCAGGGGAAGCCCTGGGG...CGGCCATGTGTGCTGTGCCTCACATCCAGATTTAGGGAGCAGAGCAGCTGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR GCA 90 bp | CAGCTGCTCTGCTCCCTAAATCTGGATGTGAGGCACAGCACACATGGCCGGGGCCACATCCTGCTCTGCTaGAGGGGGTGCTGGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLLCSLNLDVRHSTHGRGHILLC*RGCWVH Trigger: GTGGACCCAGCACCCCCTGCAGCAGAGCAGGATGTG...GCCCCGGCCATGTGTGCTGTGCCTCACATCCAGATTTAGGGAGCAGAGCAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR GCA 90 bp | CCTCAGCTGCTCTGCTCCCTAAATCTGGATGTGAGGCACAGCACACATGGCCGGAGCGCACTGCCACACTaGAGGCCTTCAGCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PQLLCSLNLDVRHSTHGRSALPH*RPSARA Trigger: GGCCCTGGCTGAAGGCCTGCAGTGTGGCAGTGCGCT...CCGGCCATGTGTGCTGTGCCTCACATCCAGATTTAGGGAGCAGAGCAGCTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR CCA 90 bp | CAACTTTCCCAACCCTGCAAGCGTCTGCACTGCCACCTCTGCTGGTGGAGGGCAACTCGTGCCGCACCATaGGACTCTCAGTGGTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: QLSQPCKRLHCHLCWWRATRAAP*DSQWSA Trigger: CGCGGACCACTGAGAGTCCCATGGTGCGGCACGAGT...TGCCCTCCACCAGCAGAGGTGGCAGTGCAGACGCTTGCAGGGTTGGGAAAGTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR GCA 90 bp | CATAGGGTCCCAAGGAAGGGACACACCAAGACCACTATGGTTAGGCAGCCAGGTCGGGCCTGCAGGGGCTaGTTGGGGTCCACCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HRVPRKGHTKTTMVRQPGRACRG*LGSTKV Trigger: GACCTTGGTGGACCCCAAGCAGCCCCTGCAGGCCCG...ACCTGGCTGCCTAACCATAGTGGTCTTGGTGTGTCCCTTCCTTGGGACCCTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS-3UTR GCA 90 bp | GAGCTGGGCAGGAAACAGTGGGCACATAGGGTCCCAAGGAAGGGACACACCAAGCACATCCTGCTCTGCTaGAGGGGGTGCTGGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELGRKQWAHRVPRKGHTKHILLC*RGCWVH Trigger: GTGGACCCAGCACCCCCTGCAGCAGAGCAGGATGTG...CTTGGTGTGTCCCTTCCTTGGGACCCTATGTGCCCACTGTTTCCTGCCCAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS-3UTR GCA 90 bp | GTGTACCCCACACACCCTTGCCCCCACAACTTTCCCAACCCTGCAAGCGTCTGCCCTTGCCACCCACGTTaGGCAGGGCAAACATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VYPTHPCPHNFPNPASVCPCHPR*AGQTWH Trigger: GTGCCATGTTTGCCCTGCGCAACGTGGGTGGCAAGG...GCAGACGCTTGCAGGGTTGGGAAAGTTGTGGGGGCAAGGGTGTGTGGGGTACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR CCA 90 bp | CACAGGGCCCCTCAGCTGCTCTGCTCCCTAAATCTGGATGTGAGGCACAGCACACGCACCATGGGCTCCTaGCTCGTGTCCTGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HRAPQLLCSLNLDVRHSTRTMGS*LVSCST Trigger: TGTGCTGCAGGACACGAGCCAGGAGCCCATGGTGCG...TGTGCTGTGCCTCACATCCAGATTTAGGGAGCAGAGCAGCTGAGGGGCCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR GCA 90 bp | AGTGGGCACATAGGGTCCCAAGGAAGGGACACACCAAGACCACTATGGTTAGGCCCCCACATCCTGCTCTaGTGCAGGGGGTGCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGHIGSQGRDTPRPLWLGPHILL*CRGCWV Trigger: GACCCAGCACCCCCTGCAGCAGAGCAGGATGTGGGG...GCCTAACCATAGTGGTCTTGGTGTGTCCCTTCCTTGGGACCCTATGTGCCCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGAGGTGTACCCCACACACCCTTGCCCCCACAACTTTCCCAACCCTGCAAGCTCAAAGAGTGGCCGTaGCTCATCCAGCAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MGGVPHTPLPPQLSQPCKLKEWP*LIQQGL Trigger: GAGGCCCTGCTGGATGAGGCACGGCCACTCTTTGAG...CTTGCAGGGTTGGGAAAGTTGTGGGGGCAAGGGTGTGTGGGGTACACCTCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR GCA 90 bp | CTGCAAGCGTCTGCACTGCCACCTCTGCTGGTGGAGGGCATGGGAGACACAGAAGCGCTCCAGCCCGTCTaGATACTGGAAATCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQASALPPLLVEGMGDTEALQPV*ILEILA Trigger: AGCCAGGATTTCCAGTATGCAGACGGGCTGGAGCGC...TTCTGTGTCTCCCATGCCCTCCACCAGCAGAGGTGGCAGTGCAGACGCTTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR CCA 90 bp | CCCTGCAAGCGTCTGCACTGCCACCTCTGCTGGTGGAGGGCATGGGAGACACAGCCAAGGTCTTCCCTATaGCCTCTATCTCTTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PCKRLHCHLCWWRAWETQPRSSL*PLSLAP Trigger: CGGAGCAAGAGATAGAGGCCATAGGGAAGACCTTGG...CTGTGTCTCCCATGCCCTCCACCAGCAGAGGTGGCAGTGCAGACGCTTGCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| 3UTR CAA 72 bp | TGCTTGACCCAGATGGGAGGTGTACCCCACACACCCTaGCCCCCACAACTTTCCCAACCCTGCAAGCGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLTQMGGVPHTP*PPQLSQPCKRL Trigger: CAGACGCTTGCAGGGTTGGGAAAGTTGTGGGGGCAAGGGTGTGTGGGGTACACCTCCCATCTGGGTCAAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR TCA 90 bp | CACACCAAGACCACTATGGTTAGGCAGCCAGGTAAAGTCCCCAGGGTTTGTGTGGCTTCCCCTGCCTCATaGCGCACCATGGGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HTKTTMVRQPGKVPRVCVASPAS*RTMGSW Trigger: CCAGGAGCCCATGGTGCGTCATGAGGCAGGGGAAGC...CACACAAACCCTGGGGACTTTACCTGGCTGCCTAACCATAGTGGTCTTGGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS-3UTR GCA 90 bp | ACCACTATGGTTAGGCAGCCAGGTAAAGTCCCCAGGGTTTGTGTGGGGCACCTGCTCAAAGAGTGGCCGTaGCTCATCCAGCAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TTMVRQPGKVPRVCVGHLLKEWP*LIQQGL Trigger: GAGGCCCTGCTGGATGAGGCACGGCCACTCTTTGAG...CAGGTGCCCCACACAAACCCTGGGGACTTTACCTGGCTGCCTAACCATAGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS-3UTR GCA 90 bp | GTGTACCCCACACACCCTTGCCCCCACAACTTTCCCAACCCTGCAAGCGTCTGCAATGTGCTCTCGCAATaGAGCCAGGCAGGCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VYPTHPCPHNFPNPASVCNVLSQ*SQAGRS Trigger: AGACCTGCCTGCCTGGCTGCATTGCGAGAGCACATT...GCAGACGCTTGCAGGGTTGGGAAAGTTGTGGGGGCAAGGGTGTGTGGGGTACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR GCA 90 bp | GAGCTGGGCAGGAAACAGTGGGCACATAGGGTCCCAAGGAAGGGACACACCAAGCCAGGTCCAGGGATATaGTCCAGCCTCACCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ELGRKQWAHRVPRKGHTKPGPGI*SSLTFS Trigger: GCTGAAGGTGAGGCTGGAGCATATCCCTGGACCTGG...CTTGGTGTGTCCCTTCCTTGGGACCCTATGTGCCCACTGTTTCCTGCCCAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCACATAGGGTCCCAAGGAAGGGACACACCAAGACCACTATGGTTAGGCAGCGCACCATGGGCTCCTaGCTCGTGTCCTGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: WAHRVPRKGHTKTTMVRQRTMGS*LVSCST Trigger: TGTGCTGCAGGACACGAGCCAGGAGCCCATGGTGCG...CTGCCTAACCATAGTGGTCTTGGTGTGTCCCTTCCTTGGGACCCTATGTGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTCTGCTCCCTAAATCTGGATGTGAGGCACAGCACACATGGCCGGGGCCAGTATCGCTCAAAGAGTaGCCGTGCCTCATCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AALLPKSGCEAQHTWPGPVSLKE*PCLIQQ Trigger: CTGCTGGATGAGGCACGGCCACTCTTTGAGCGATAC...TGGCCCCGGCCATGTGTGCTGTGCCTCACATCCAGATTTAGGGAGCAGAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR CCA 90 bp | GTGTACCCCACACACCCTTGCCCCCACAACTTTCCCAACCCTGCAAGCGTCTGCTGCGCAGGGCAAACATaGCACGGTATCGCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VYPTHPCPHNFPNPASVCCAGQT*HGIAQR Trigger: TCTTTGAGCGATACCGTGCCATGTTTGCCCTGCGCA...GCAGACGCTTGCAGGGTTGGGAAAGTTGTGGGGGCAAGGGTGTGTGGGGTACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR CCA 90 bp | GGAGAGCTGGGCAGGAAACAGTGGGCACATAGGGTCCCAAGGAAGGGACACACCTGCGCAGGGCAAACATaGCACGGTATCGCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GELGRKQWAHRVPRKGHTCAGQT*HGIAQR Trigger: TCTTTGAGCGATACCGTGCCATGTTTGCCCTGCGCA...GGTGTGTCCCTTCCTTGGGACCCTATGTGCCCACTGTTTCCTGCCCAGCTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS-3UTR GCA 90 bp | CAACTTTCCCAACCCTGCAAGCGTCTGCACTGCCACCTCTGCTGGTGGAGGGCAGGGTCCGTAGAATACTaGTTCAGGAGGCCTAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QLSQPCKRLHCHLCWWRAGSVEY*FRRPRT Trigger: AGTTCTAGGCCTCCTGAAGCAGTATTCTACGGACCC...TGCCCTCCACCAGCAGAGGTGGCAGTGCAGACGCTTGCAGGGTTGGGAAAGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR GCA 90 bp | CACACCAAGACCACTATGGTTAGGCAGCCAGGTAAAGTCCCCAGGGTTTGTGTGCCTTGCCACCCACGTTaGGCAGGGCAAACATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTKTTMVRQPGKVPRVCVPCHPR*AGQTWH Trigger: GTGCCATGTTTGCCCTGCGCAACGTGGGTGGCAAGG...CACACAAACCCTGGGGACTTTACCTGGCTGCCTAACCATAGTGGTCTTGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGCAAGCGTCTGCACTGCCACCTCTGCTGGTGGAGGGCATGGGAGACACAGGCATACTGGAAATCCTaGCTGCTCTCATACTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: PCKRLHCHLCWWRAWETQAYWKS*LLSYSY Trigger: GTATGAGTATGAGAGCAGCCAGGATTTCCAGTATGC...CTGTGTCTCCCATGCCCTCCACCAGCAGAGGTGGCAGTGCAGACGCTTGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR CCA 90 bp | ACCAAGACCACTATGGTTAGGCAGCCAGGTAAAGTCCCCAGGGTTTGTGTGGGGGTATCGCTCAAAGAGTaGCCGTGCCTCATCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKTTMVRQPGKVPRVCVGVSLKE*PCLIQQ Trigger: CTGCTGGATGAGGCACGGCCACTCTTTGAGCGATAC...CCCCACACAAACCCTGGGGACTTTACCTGGCTGCCTAACCATAGTGGTCTTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAGACCACTATGGTTAGGCAGCCAGGTAAAGTCCCCAGGGTTTGTGTGGGGCCAAGGTCTTCCCTATaGCCTCTATCTCTTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TKTTMVRQPGKVPRVCVGPRSSL*PLSLAP Trigger: CGGAGCAAGAGATAGAGGCCATAGGGAAGACCTTGG...CCCCACACAAACCCTGGGGACTTTACCTGGCTGCCTAACCATAGTGGTCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGGCACATAGGGTCCCAAGGAAGGGACACACCAAGACCACTATGGTTAGGCGGGTCCGTAGAATACTaGTTCAGGAGGCCTAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SGHIGSQGRDTPRPLWLGGSVEY*FRRPRT Trigger: AGTTCTAGGCCTCCTGAAGCAGTATTCTACGGACCC...GCCTAACCATAGTGGTCTTGGTGTGTCCCTTCCTTGGGACCCTATGTGCCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS GCA 90 bp | CTCGTGCCGCACCATGGGACTCTCAGTGGTCCGCGCCAATGTGGCTaGCAGCCCGGGCACGGCTGCCTCGTGCTGCAGCTGACCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVPHHGTLSGPRQCG*QPGHGCLVLQLTQH Trigger: GTGCTGGGTCAGCTGCAGCACGAGGCAGCCGTGCCCGGGCTGGCAGCCACATTGGCGCGGACCACTGAGAGTCCCATGGTGCGGCACGAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS CCA 90 bp | CGCACTCGTGCCGCACCATGGGACTCTCAGTGGTCCGCGCCAATGTaGCTGCCAGCCCGGGCACGGCTGCCTCGTGCTGCAGCTGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RTRAAPWDSQWSAPM*LPARARLPRAAADP Trigger: TGGGTCAGCTGCAGCACGAGGCAGCCGTGCCCGGGCTGGCAGCCACATTGGCGCGGACCACTGAGAGTCCCATGGTGCGGCACGAGTGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS GCA 90 bp | ACTCTCAGTGGTCCGCGCCAATGTGGCTGCCAGCCCGGGCACGGCTaGCTCGTGCTGCAGCTGACCCAGCACATAGCCCACCTCGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TLSGPRQCGCQPGHG*LVLQLTQHIAHLVA Trigger: CGCCACGAGGTGGGCTATGTGCTGGGTCAGCTGCAGCACGAGGCAGCCGTGCCCGGGCTGGCAGCCACATTGGCGCGGACCACTGAGAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS GCA 90 bp | AGGCAGGCAGGTCTGGCGATGGCACCCAGGGCCTCTGCGCACTCGTaGCGCACCATGGGACTCTCAGTGGTCCGCGCCAATGTGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RQAGLAMAPRASAHS*RTMGLSVVRANVAA Trigger: GGCAGCCACATTGGCGCGGACCACTGAGAGTCCCATGGTGCGGCACGAGTGCGCAGAGGCCCTGGGTGCCATCGCCAGACCTGCCTGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS GCA 90 bp | CAATGCAGCCAGGCAGGCAGGTCTGGCGATGGCACCCAGGGCCTCTaGGCACTCGTGCCGCACCATGGGACTCTCAGTGGTCCGCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: QCSQAGRSGDGTQGL*ALVPHHGTLSGPRQ Trigger: TTGGCGCGGACCACTGAGAGTCCCATGGTGCGGCACGAGTGCGCAGAGGCCCTGGGTGCCATCGCCAGACCTGCCTGCCTGGCTGCATTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS GCA 90 bp | GCTCTCCCGCACCACCTGCTCAGGGTCCTCAATGTGCTCTCGCAATaGAGCCAGGCAGGCAGGTCTGGCGATGGCACCCAGGGCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALPHHLLRVLNVLSQ*SQAGRSGDGTQGLC Trigger: GCAGAGGCCCTGGGTGCCATCGCCAGACCTGCCTGCCTGGCTGCATTGCGAGAGCACATTGAGGACCCTGAGCAGGTGGTGCGGGAGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS GCA 90 bp | GCCACCTCGCAGCTCTCCCGCACCACCTGCTCAGGGTCCTCAATGTaGTCTCGCAATGCAGCCAGGCAGGCAGGTCTGGCGATGGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: ATSQLSRTTCSGSSM*SRNAARQAGLAMAP Trigger: GGGTGCCATCGCCAGACCTGCCTGCCTGGCTGCATTGCGAGAGCACATTGAGGACCCTGAGCAGGTGGTGCGGGAGAGCTGCGAGGTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS CCA 90 bp | CTGCAGGGGGTGCTGGGTCCACTGAGAGGTAGGGTCCTGCACATGTaGCCTCCCCCGGGTGCTGCTGTAGCCACTCTAGACGACCAACGG | + |
|
Preference number: 5 (lower is better) Translates to: LQGVLGPLRGRVLHM*PPPGAAVATLDDQR Trigger: CCGTTGGTCGTCTAGAGTGGCTACAGCAGCACCCGGGGGAGGCCACATGTGCAGGACCCTACCTCTCAGTGGACCCAGCACCCCCTGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000072751.13 ENSMUST00000121047.2 ENSMUST00000142346.8 |
||
| CDS CCA 90 bp | GGGCCAAGGCAGCCTCCTTGCCACCCACGTTGCGCAGGGCAAACATaGCACGGTATCGCTCAAAGAGTGGCCGTGCCTCATCCAGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GPRQPPCHPRCAGQT*HGIAQRVAVPHPAG Trigger: CCCTGCTGGATGAGGCACGGCCACTCTTTGAGCGATACCGTGCCATGTTTGCCCTGCGCAACGTGGGTGGCAAGGAGGCTGCCTTGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072751.13 ENSMUST00000121047.2 |
||
| CDS-3UTR CAA 90 bp | GACCCAGATGGGAGGTGTACCCCACACACCCTTGCCCCCACAACTTTCCCAACCGCCAAGGCAGCCTCCTaGCCACCCACGTTGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DPDGRCTPHTLAPTTFPTAKAAS*PPTLRR Trigger: CCTGCGCAACGTGGGTGGCAAGGAGGCTGCCTTGGC...GGTTGGGAAAGTTGTGGGGGCAAGGGTGTGTGGGGTACACCTCCCATCTGGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS GCA 90 bp | CCTCACCTTCAGCCAGGGCCAAGGCAGCCTCCTTGCCACCCACGTTaGGCAGGGCAAACATGGCACGGTATCGCTCAAAGAGTGGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PHLQPGPRQPPCHPR*AGQTWHGIAQRVAV Trigger: CACGGCCACTCTTTGAGCGATACCGTGCCATGTTTGCCCTGCGCAACGTGGGTGGCAAGGAGGCTGCCTTGGCCCTGGCTGAAGGTGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS GCA 90 bp | GTGGCCGCAGGCGCTCCAGCCCGTCTGCATACTGGAAATCCTGGCTaGTCTCATACTCATACATGTCCAGGGCCACCTCGCAGCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VAAGAPARLHTGNPG*SHTHTCPGPPRSSP Trigger: GGGAGAGCTGCGAGGTGGCCCTGGACATGTATGAGTATGAGAGCAGCCAGGATTTCCAGTATGCAGACGGGCTGGAGCGCCTGCGGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS CCA 90 bp | GGTGGTGGCCGCAGGCGCTCCAGCCCGTCTGCATACTGGAAATCCTaGCTGCTCTCATACTCATACATGTCCAGGGCCACCTCGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GGGRRRSSPSAYWKS*LLSYSYMSRATSQL Trigger: GAGCTGCGAGGTGGCCCTGGACATGTATGAGTATGAGAGCAGCCAGGATTTCCAGTATGCAGACGGGCTGGAGCGCCTGCGGCCACCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS-3UTR CAA 90 bp | AGCTGGGCAGGAAACAGTGGGCACATAGGGTCCCAAGGAAGGGACACACCAAGAGCCAAGGCAGCCTCCTaGCCACCCACGTTGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SWAGNSGHIGSQGRDTPRAKAAS*PPTLRR Trigger: CCTGCGCAACGTGGGTGGCAAGGAGGCTGCCTTGGC...TCTTGGTGTGTCCCTTCCTTGGGACCCTATGTGCCCACTGTTTCCTGCCCAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS GCA 90 bp | TACTCATACATGTCCAGGGCCACCTCGCAGCTCTCCCGCACCACCTaGTCAGGGTCCTCAATGTGCTCTCGCAATGCAGCCAGGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YSYMSRATSQLSRTT*SGSSMCSRNAARQA Trigger: TGCCTGCCTGGCTGCATTGCGAGAGCACATTGAGGACCCTGAGCAGGTGGTGCGGGAGAGCTGCGAGGTGGCCCTGGACATGTATGAGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS GCA 90 bp | AGCTGGCACGTTTCAGCCACCTCAACCACTGGGTCCGTAGAATACTaGTTCAGGAGGCCTAGAACTTCCGGGTTACCAATCGCCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SWHVSATSTTGSVEY*FRRPRTSGLPIAPR Trigger: CCTGGGGGCGATTGGTAACCCGGAAGTTCTAGGCCTCCTGAAGCAGTATTCTACGGACCCAGTGGTTGAGGTGGCTGAAACGTGCCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072751.13 ENSMUST00000121047.2 ENSMUST00000142346.8 |
||
| CDS GCA 72 bp | GGTCCGCGCCAATGTGGCTGCCAGCCCGGGCACGGCTaGCTCGTGCTGCAGCTGACCCAGCACATAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GPRQCGCQPGHG*LVLQLTQHIAH Trigger: GTGGGCTATGTGCTGGGTCAGCTGCAGCACGAGGCAGCCGTGCCCGGGCTGGCAGCCACATTGGCGCGGACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS CCA 72 bp | GCCGCACCATGGGACTCTCAGTGGTCCGCGCCAATGTaGCTGCCAGCCCGGGCACGGCTGCCTCGTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AAPWDSQWSAPM*LPARARLPRAA Trigger: TGCAGCACGAGGCAGCCGTGCCCGGGCTGGCAGCCACATTGGCGCGGACCACTGAGAGTCCCATGGTGCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS CCA 72 bp | CCTCTGCGCACTCGTGCCGCACCATGGGACTCTCAGTaGTCCGCGCCAATGTGGCTGCCAGCCCGGGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: PLRTRAAPWDSQ*SAPMWLPARAR Trigger: CCGTGCCCGGGCTGGCAGCCACATTGGCGCGGACCACTGAGAGTCCCATGGTGCGGCACGAGTGCGCAGAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS GCA 72 bp | CACCATGGGACTCTCAGTGGTCCGCGCCAATGTGGCTaGCAGCCCGGGCACGGCTGCCTCGTGCTGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HHGTLSGPRQCG*QPGHGCLVLQL Trigger: CAGCTGCAGCACGAGGCAGCCGTGCCCGGGCTGGCAGCCACATTGGCGCGGACCACTGAGAGTCCCATGGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS GCA 72 bp | GGTCTGGCGATGGCACCCAGGGCCTCTGCGCACTCGTaGCGCACCATGGGACTCTCAGTGGTCCGCGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GLAMAPRASAHS*RTMGLSVVRAN Trigger: ATTGGCGCGGACCACTGAGAGTCCCATGGTGCGGCACGAGTGCGCAGAGGCCCTGGGTGCCATCGCCAGACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS GCA 72 bp | CAGGCAGGCAGGTCTGGCGATGGCACCCAGGGCCTCTaGGCACTCGTGCCGCACCATGGGACTCTCAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QAGRSGDGTQGL*ALVPHHGTLSG Trigger: ACCACTGAGAGTCCCATGGTGCGGCACGAGTGCGCAGAGGCCCTGGGTGCCATCGCCAGACCTGCCTGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS CCA 72 bp | GGCTCGTGTCCTGCAGCACATCCGCCAGCACAGGGATaGCCCGTGCGTCCCTCATCTGGCCCAGGCAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSCPAAHPPAQG*PVRPSSGPGSR Trigger: CCTACTGCCTGGGCCAGATGAGGGACGCACGGGCCATCCCTGTGCTGGCGGATGTGCTGCAGGACACGAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072751.13 ENSMUST00000121047.2 ENSMUST00000142346.8 |
||
| CDS CCA 72 bp | TCGCCCCCAGGGCTTCCCCTGCCTCATGACGCACCATaGGCTCCTGGCTCGTGTCCTGCAGCACATCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPPGLPLPHDAP*APGSCPAAHPP Trigger: TGGCGGATGTGCTGCAGGACACGAGCCAGGAGCCCATGGTGCGTCATGAGGCAGGGGAAGCCCTGGGGGCGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072751.13 ENSMUST00000121047.2 ENSMUST00000142346.8 |
||
| CDS TCA 72 bp | CACATCCTGCTCTGCTGCAGGGGGTGCTGGGTCCACTaGGAGGTAGGGTCCTGCACATGTGGCCTCCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: HILLCCRGCWVH*EVGSCTCGLPR Trigger: CCGGGGGAGGCCACATGTGCAGGACCCTACCTCTCAGTGGACCCAGCACCCCCTGCAGCAGAGCAGGATGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000072751.13 ENSMUST00000121047.2 ENSMUST00000142346.8 |
||
| CDS GCA 72 bp | CCAGCACATAGCCCACCTCGTGGCGGAAGAGCGCACTaGCACACTGCAGGCCTTCAGCCAGGGCCAAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PAHSPPRGGRAH*HTAGLQPGPRQ Trigger: CTGCCTTGGCCCTGGCTGAAGGCCTGCAGTGTGGCAGTGCGCTCTTCCGCCACGAGGTGGGCTATGTGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS CCA 72 bp | CAATGTGCTCTCGCAATGCAGCCAGGCAGGCAGGTCTaGCGATGGCACCCAGGGCCTCTGCGCACTCGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: QCALAMQPGRQV*RWHPGPLRTRA Trigger: GGCACGAGTGCGCAGAGGCCCTGGGTGCCATCGCCAGACCTGCCTGCCTGGCTGCATTGCGAGAGCACATTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS GCA 72 bp | CAGCTCTCCCGCACCACCTGCTCAGGGTCCTCAATGTaGTCTCGCAATGCAGCCAGGCAGGCAGGTCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: QLSRTTCSGSSM*SRNAARQAGLA Trigger: CGCCAGACCTGCCTGCCTGGCTGCATTGCGAGAGCACATTGAGGACCCTGAGCAGGTGGTGCGGGAGAGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS CCA 72 bp | GCGCAGGGCAAACATGGCACGGTATCGCTCAAAGAGTaGCCGTGCCTCATCCAGCAGGGCCTCCCGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AQGKHGTVSLKE*PCLIQQGLPQP Trigger: AGGCTGCGGGAGGCCCTGCTGGATGAGGCACGGCCACTCTTTGAGCGATACCGTGCCATGTTTGCCCTGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072751.13 ENSMUST00000121047.2 ENSMUST00000142346.8 |
||
| CDS GCA 72 bp | CACCACCTGCTCAGGGTCCTCAATGTGCTCTCGCAATaGAGCCAGGCAGGCAGGTCTGGCGATGGCACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HHLLRVLNVLSQ*SQAGRSGDGTQ Trigger: CTGGGTGCCATCGCCAGACCTGCCTGCCTGGCTGCATTGCGAGAGCACATTGAGGACCCTGAGCAGGTGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS CCA 72 bp | GTGCTGGGTCCACTGAGAGGTAGGGTCCTGCACATGTaGCCTCCCCCGGGTGCTGCTGTAGCCACTCTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLGPLRGRVLHM*PPPGAAVATLD Trigger: GTCTAGAGTGGCTACAGCAGCACCCGGGGGAGGCCACATGTGCAGGACCCTACCTCTCAGTGGACCCAGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072751.13 ENSMUST00000121047.2 ENSMUST00000142346.8 |
||
| CDS CAA 90 bp | GCCTCACCTTCAGCCAGGGCCAAGGCAGCCTCCTTGCCACCCACGTaGCGCAGGGCAAACATGGCACGGTATCGCTCAAAGAGTGGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: ASPSARAKAASLPPT*RRANMARYRSKSGR Trigger: ACGGCCACTCTTTGAGCGATACCGTGCCATGTTTGCCCTGCGCAACGTGGGTGGCAAGGAGGCTGCCTTGGCCCTGGCTGAAGGTGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS CAA 90 bp | GGATATGCTCCAGCCTCACCTTCAGCCAGGGCCAAGGCAGCCTCCTaGCCACCCACGTTGCGCAGGGCAAACATGGCACGGTATCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GYAPASPSARAKAAS*PPTLRRANMARYRS Trigger: TGAGCGATACCGTGCCATGTTTGCCCTGCGCAACGTGGGTGGCAAGGAGGCTGCCTTGGCCCTGGCTGAAGGTGAGGCTGGAGCATATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS GCA 72 bp | CAGCCAGGGCCAAGGCAGCCTCCTTGCCACCCACGTTaGGCAGGGCAAACATGGCACGGTATCGCTCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: QPGPRQPPCHPR*AGQTWHGIAQR Trigger: TCTTTGAGCGATACCGTGCCATGTTTGCCCTGCGCAACGTGGGTGGCAAGGAGGCTGCCTTGGCCCTGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072751.13 ENSMUST00000121047.2 |
||
| CDS CAA 72 bp | TCAGCCAGGGCCAAGGCAGCCTCCTTGCCACCCACGTaGCGCAGGGCAAACATGGCACGGTATCGCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SARAKAASLPPT*RRANMARYRSK Trigger: CTTTGAGCGATACCGTGCCATGTTTGCCCTGCGCAACGTGGGTGGCAAGGAGGCTGCCTTGGCCCTGGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072751.13 ENSMUST00000121047.2 |
||
| CDS GCA 72 bp | TCAGGCTGCACAAGAGATCACCCAGGTCCAGGGATATaGTCCAGCCTCACCTTCAGCCAGGGCCAAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGCTRDHPGPGI*SSLTFSQGQGS Trigger: GCTGCCTTGGCCCTGGCTGAAGGTGAGGCTGGAGCATATCCCTGGACCTGGGTGATCTCTTGTGCAGCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121047.2 |
||
| CDS CCA 72 bp | CAGCCTCCTTGCCACCCACGTTGCGCAGGGCAAACATaGCACGGTATCGCTCAAAGAGTGGCCGTGCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QPPCHPRCAGQT*HGIAQRVAVPH Trigger: ATGAGGCACGGCCACTCTTTGAGCGATACCGTGCCATGTTTGCCCTGCGCAACGTGGGTGGCAAGGAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072751.13 ENSMUST00000121047.2 |
||
| CDS GCA 72 bp | GGCGCTCCAGCCCGTCTGCATACTGGAAATCCTGGCTaGTCTCATACTCATACATGTCCAGGGCCACCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GAPARLHTGNPG*SHTHTCPGPPR Trigger: GCGAGGTGGCCCTGGACATGTATGAGTATGAGAGCAGCCAGGATTTCCAGTATGCAGACGGGCTGGAGCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS CCA 72 bp | TGCTGCTGTAGCCACTCTAGACGACCAACGGCGAGCTaGCACGTTTCAGCCACCTCAACCACTGGGTCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: CCCSHSRRPTAS*HVSATSTTGSV Trigger: TACGGACCCAGTGGTTGAGGTGGCTGAAACGTGCCAGCTCGCCGTTGGTCGTCTAGAGTGGCTACAGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072751.13 ENSMUST00000121047.2 ENSMUST00000142346.8 |
||
| CDS CCA 72 bp | CGCAGGCGCTCCAGCCCGTCTGCATACTGGAAATCCTaGCTGCTCTCATACTCATACATGTCCAGGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: RRRSSPSAYWKS*LLSYSYMSRAT Trigger: GGTGGCCCTGGACATGTATGAGTATGAGAGCAGCCAGGATTTCCAGTATGCAGACGGGCTGGAGCGCCTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS CCA 72 bp | GGTGGTGGCCGCAGGCGCTCCAGCCCGTCTGCATACTaGAAATCCTGGCTGCTCTCATACTCATACATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GGGRRRSSPSAY*KSWLLSYSYMS Trigger: GGACATGTATGAGTATGAGAGCAGCCAGGATTTCCAGTATGCAGACGGGCTGGAGCGCCTGCGGCCACCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072751.13 |
||
| CDS GCA 72 bp | GTTTCAGCCACCTCAACCACTGGGTCCGTAGAATACTaGTTCAGGAGGCCTAGAACTTCCGGGTTACCAATC | + |
|
Preference number: 6 (lower is better) Translates to: VSATSTTGSVEY*FRRPRTSGLPI Trigger: GATTGGTAACCCGGAAGTTCTAGGCCTCCTGAAGCAGTATTCTACGGACCCAGTGGTTGAGGTGGCTGAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072751.13 ENSMUST00000121047.2 ENSMUST00000142346.8 |
||