RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DOCK5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044447

Ensembl transcript IDs: ENSMUST00000039135.6

Found 388 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTCCACGGGCTGAAGGGGATGGGACTCAGCGTTCGCCGTCTCAGTaGAGGAAGCAGCGCTGGCAGGGAGCCCTGCTCCACAGGCCGCCC +
Preference number: 1 (lower is better)
Translates to: VPRAEGDGTQRSPSQ*RKQRWQGALLHRPP
Trigger: GGGCGGCCTGTGGAGCAGGGCTCCCTGCCAGCGCTGCTTCCTGCACTGAGACGGCGAACGCTGAGTCCCATCCCCTTCAGCCCGTGGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 90 bp CTTCTCAGAAGTCCCAAGCTCCCTGGAAACCCTCTAGCACCCTTCTaGTTCCTTCCCTCCTTCTTCACACCAGGGCCTGGTTCTTTGTAC +
Preference number: 1 (lower is better)
Translates to: LLRSPKLPGNPLAPF*FLPSFFTPGPGSLY
Trigger: GTACAAAGAACCAGGCCCTGGTGTGAAGAAGGAGGGAAGGAACCAGAAGGGTGCTAGAGGGTTTCCAGGGAGCTTGGGACTTCTGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 90 bp GACCTGGCCACACCCATGCAGTCTCAAATACGTAAGGAAGTGAACTaGGGGCATGGGATACCATCTCCACCGTCTTGTGTTGATGGGAGG +
Preference number: 1 (lower is better)
Translates to: DLATPMQSQIRKEVN*GHGIPSPPSCVDGR
Trigger: CCTCCCATCAACACAAGACGGTGGAGATGGTATCCCATGCCCCCAGTTCACTTCCTTACGTATTTGAGACTGCATGGGTGTGGCCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 90 bp TACTGTTCACTGGTTGAGGACTCACCCCTGCTACTGTTCACTGGTTaGGGACTCACCCCTGCTACTGTCACTGCAAGAAGAGGCAGAGGA +
Preference number: 1 (lower is better)
Translates to: YCSLVEDSPLLLFTG*GLTPATVTARRGRG
Trigger: TCCTCTGCCTCTTCTTGCAGTGACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 90 bp TTTTTCACCAGCCTGCTAGGGTCTTCTCAGAAGTCCCAAGCTCCCTaGAAACCCTCTAGCACCCTTCTGGTTCCTTCCCTCCTTCTTCAC +
Preference number: 1 (lower is better)
Translates to: FFTSLLGSSQKSQAP*KPSSTLLVPSLLLH
Trigger: GTGAAGAAGGAGGGAAGGAACCAGAAGGGTGCTAGAGGGTTTCCAGGGAGCTTGGGACTTCTGAGAAGACCCTAGCAGGCTGGTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 90 bp GAAAAGACCTGGCCACACCCATGCAGTCTCAAATACGTAAGGAAGTaGACTGGGGGCATGGGATACCATCTCCACCGTCTTGTGTTGATG +
Preference number: 1 (lower is better)
Translates to: EKTWPHPCSLKYVRK*TGGMGYHLHRLVLM
Trigger: CATCAACACAAGACGGTGGAGATGGTATCCCATGCCCCCAGTTCACTTCCTTACGTATTTGAGACTGCATGGGTGTGGCCAGGTCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 90 bp TTGAGACCATTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTaGTCCATCATGGAAGTAAAGAGACTCTTGTGGCTTTCTGGGGTG +
Preference number: 1 (lower is better)
Translates to: LRPFQSPCAFHGCIG*SIMEVKRLLWLSGV
Trigger: CACCCCAGAAAGCCACAAGAGTCTCTTTACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAATGGTCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 90 bp GGCCTTGTAAACCAGCACCTACCTACGCCATCACCCAGAGTCCTTTaGGTTGGGGCAGCTGAAAGCTATTATTTTCATGACTATGGAAAG +
Preference number: 1 (lower is better)
Translates to: GLVNQHLPTPSPRVL*VGAAESYYFHDYGK
Trigger: CTTTCCATAGTCATGAAAATAATAGCTTTCAGCTGCCCCAACGCAAAGGACTCTGGGTGATGGCGTAGGTAGGTGCTGGTTTACAAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 90 bp TTTAGGGAGAGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTaGCACTTTCAGGAGGTTGTACATGTCAGGGATGCAGGCAGAAGA +
Preference number: 1 (lower is better)
Translates to: FREREPCGSWSVLSI*HFQEVVHVRDAGRR
Trigger: TCTTCTGCCTGCATCCCTGACATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 90 bp CATTGGGTGCTCCATCATGGAAGTAAAGAGACTCTTGTGGCTTTCTaGGGTGTGTATACTAACTTTTCTAGTGCTGTGCCAGGCATGCCT +
Preference number: 1 (lower is better)
Translates to: HWVLHHGSKETLVAF*GVYTNFSSAVPGMP
Trigger: AGGCATGCCTGGCACAGCACTAGAAAAGTTAGTATACACACCCCAGAAAGCCACAAGAGTCTCTTTACTTCCATGATGGAGCACCCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 90 bp TTGGAAGAAAAGACTCAGGGCAAGGCCATTGGAGAGATTCGAGAATaGCCAGGGCATATCCAAGTCATAGCCAGAAAGCTTTCAGTTTTG +
Preference number: 1 (lower is better)
Translates to: LEEKTQGKAIGEIRE*PGHIQVIARKLSVL
Trigger: CAAAACTGAAAGCTTTCTGGCTATGACTTGGATATGCCCTGGGCATTCTCGAATCTCTCCAATGGCCTTGCCCTGAGTCTTTTCTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 90 bp TCTTGCATCCCCCTTAGCAAAGACGTGAAGAGGCGGGTATGCAAATaGTTGAATCCTCCTGTTCACTTGAACTTGGAAGAAAAGACTCAG +
Preference number: 1 (lower is better)
Translates to: SCIPLSKDVKRRVCK*LNPPVHLNLEEKTQ
Trigger: CTGAGTCTTTTCTTCCAAGTTCAAGTGAACAGGAGGATTCAAGCATTTGCATACCCGCCTCTTCACGTCTTTGCTAAGGGGGATGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 90 bp ACTTATGGAGGAATAAAAATGTCCAAGAAAACAGTAGTCATCCACTaGCCCGAAGTACACAAGGGAAGTCTGATCCCGAGTGAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: TYGGIKMSKKTVVIH*PEVHKGSLIPSEEL
Trigger: CAGCTCCTCACTCGGGATCAGACTTCCCTTGTGTACTTCGGGGCAGTGGATGACTACTGTTTTCTTGGACATTTTTATTCCTCCATAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 90 bp TCAAAGGAGACAGTAGACTTTAGGGAGAGAGAACCATGTGGCTCCTaGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATGTC +
Preference number: 1 (lower is better)
Translates to: SKETVDFREREPCGS*SVLSIWHFQEVVHV
Trigger: GACATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCTAAAGTCTACTGTCTCCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 90 bp GGTAAAGACCTCAAGAGGAAAACCATTTCTTTCGCAGCTAACAACTaGTGGCTTGACTCTGAACCCACCCAAAGAGATCCTTCACGTTTG +
Preference number: 1 (lower is better)
Translates to: GKDLKRKTISFAANN*WLDSEPTQRDPSRL
Trigger: CAAACGTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGAAAGAAATGGTTTTCCTCTTGAGGTCTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 90 bp TTCATTCCTTTAGCTGGACCAAGAATAGAACCCAGGACCCTCACATaGGCTAATAAGCAAGTGAGCTACACCTTCAGCACTTCTGACTTA +
Preference number: 1 (lower is better)
Translates to: FIPLAGPRIEPRTLT*ANKQVSYTFSTSDL
Trigger: TAAGTCAGAAGTGCTGAAGGTGTAGCTCACTTGCTTATTAGCTCATGTGAGGGTCCTGGGTTCTATTCTTGGTCCAGCTAAAGGAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 90 bp AGTGCCTTTCAATACCTCAGAGATCTTAGCAAGGGCAATAAAGACTaGTTCTTCTGTCCCCCTCTTCTTGTCCTGTCTGTATTTAAACGG +
Preference number: 1 (lower is better)
Translates to: SAFQYLRDLSKGNKD*FFCPPLLVLSVFKR
Trigger: CCGTTTAAATACAGACAGGACAAGAAGAGGGGGACAGAAGAACCAGTCTTTATTGCCCTTGCTAAGATCTCTGAGGTATTGAAAGGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 90 bp ACTCCTTCATCCATAGCTTCAGGCCAGGTAGTTTTTATGACAACTTaGTACAAGCTAATCATAACAATAGAAGCCCTAAGACACCTTCCC +
Preference number: 1 (lower is better)
Translates to: TPSSIASGQVVFMTT*YKLIITIEALRHLP
Trigger: GGGAAGGTGTCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTTGTCATAAAAACTACCTGGCCTGAAGCTATGGATGAAGGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR GCA 90 bp GGGAGCTTTGAGACCATTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGGCTGGCAGGGAGCCCTaGTCCACAGGCCGCCCTTCC +
Preference number: 2 (lower is better)
Translates to: GSFETISEPVCFPWLHWVAGREP*STGRPS
Trigger: GGAAGGGCGGCCTGTGGAGCAGGGCTCCCTGCCAGC...CACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAATGGTCTCAAAGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR TCA 90 bp GCAGTGACAAGGTGGCCATTGTCCCATCTCAGCTCCCGTGACACGCCTTGTTTTGAAGGCATCCACACCTaGGAGTGGCCCACCCCAACT +
Preference number: 2 (lower is better)
Translates to: AVTRWPLSHLSSRDTPCFEGIHT*EWPTPT
Trigger: AGTTGGGGTGGGCCACTCTCAGGTGTGGATGCCTTC...AAAACAAGGCGTGTCACGGGAGCTGAGATGGGACAATGGCCACCTTGTCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR GCA 90 bp GCAGTGACAAGGTGGCCATTGTCCCATCTCAGCTCCCGTGACACGCCTTGTTTTCCCTGCTACTGTCACTaGAAGAAGAGGCAGAGGATT +
Preference number: 2 (lower is better)
Translates to: AVTRWPLSHLSSRDTPCFPCYCH*KKRQRI
Trigger: AATCCTCTGCCTCTTCTTGCAGTGACAGTAGCAGGG...AAAACAAGGCGTGTCACGGGAGCTGAGATGGGACAATGGCCACCTTGTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR TCA 90 bp CACCCCTGCTACTGTTCACTGGTTGAGGACTCACCCCTGCTACTGTTCACTGGTGCCTGCAAAGCAAGGTaGCATCTTCGAGTCCTTTTT +
Preference number: 2 (lower is better)
Translates to: HPCYCSLVEDSPLLLFTGACKAR*HLRVLF
Trigger: AAAAAGGACTCGAAGATGTCACCTTGCTTTGCAGGC...ACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR GCA 90 bp TTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTAGGCATAGCAAGTGACTaGTGTGTGGTGTGGGCCATT +
Preference number: 2 (lower is better)
Translates to: FQSPCAFHGCIGCSIMEVGIASD*CVVWAI
Trigger: AATGGCCCACACCACACAGCAGTCACTTGCTATGCC...TACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CCA 90 bp GAGAAATGTGGATTCCAGTTCCTAGAGCAAAAGCCTTTGGACAGAAATCTCACTTGCAGGAAGCAGCGCTaGCAGGGAGCCCTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: EKCGFQFLEQKPLDRNLTCRKQR*QGALLH
Trigger: GTGGAGCAGGGCTCCCTGCCAGCGCTGCTTCCTGCA...AGTGAGATTTCTGTCCAAAGGCTTTTGCTCTAGGAACTGGAATCCACATTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CCA 90 bp TTCCCAAAGAGGTTATTCTGCCAGGGCCTTGTAAACCAGCACCTACCTACGCCACAAGTGACTGCTGTGTaGTGTGGGCCATTTGTCAGG +
Preference number: 2 (lower is better)
Translates to: FPKRLFCQGLVNQHLPTPQVTAV*CGPFVR
Trigger: CCTGACAAATGGCCCACACCACACAGCAGTCACTTG...TGGCGTAGGTAGGTGCTGGTTTACAAGGCCCTGGCAGAATAACCTCTTTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CCA 90 bp TCGCAGCTAACAACTGATGGCTTGACTCTGAACCCACCCAAAGAGATCCTTCACACCTGCCCCTCGATCTaGAAGCACCTGGAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: SQLTTDGLTLNPPKEILHTCPSI*KHLEGK
Trigger: TTTCCCTTCCAGGTGCTTCCAGATCGAGGGGCAGGT...GTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR GCA 90 bp GGGAGCTTTGAGACCATTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCATGCCTCTGTATTTTaGTCCTCTGATGGCTGTGAT +
Preference number: 2 (lower is better)
Translates to: GSFETISEPVCFPWLHWVHASVF*SSDGCD
Trigger: ATCACAGCCATCAGAGGAGCAAAATACAGAGGCATG...CACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAATGGTCTCAAAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR GCA 90 bp CACCCCTGCTACTGTTCACTGGTTGAGGACTCACCCCTGCTACTGTTCACTGGTACTTTTCTAGTGCTGTaGCAGGCATGCCTCTGTATT +
Preference number: 2 (lower is better)
Translates to: HPCYCSLVEDSPLLLFTGTFLVL*QACLCI
Trigger: AATACAGAGGCATGCCTGGCACAGCACTAGAAAAGT...ACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR GCA 90 bp TTCCCAAAGAGGTTATTCTGCCAGGGCCTTGTAAACCAGCACCTACCTACGCCATTGAGGACTCACCCCTaGTACTGTTCACTGGTTGAG +
Preference number: 2 (lower is better)
Translates to: FPKRLFCQGLVNQHLPTPLRTHP*YCSLVE
Trigger: CTCAACCAGTGAACAGTAGCAGGGGTGAGTCCTCAA...TGGCGTAGGTAGGTGCTGGTTTACAAGGCCCTGGCAGAATAACCTCTTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CCA 90 bp AGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTAAAGAGAGACTGCTGTGTGGTGTaGGCCATTTGTCAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: SPCAFHGCIGCSIMEVKRDCCVV*AICQEN
Trigger: ATTCTCCTGACAAATGGCCCACACCACACAGCAGTC...TCTCTTTACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CAA 90 bp GACGTGAAGAGGCGGGTATGCAAATGCTTGAATCCTCCTGTTCACTaGAACTTGGAAGAAAAGACTCAGGGCAAGGCCATTGGAGAGATT +
Preference number: 2 (lower is better)
Translates to: DVKRRVCKCLNPPVH*NLEEKTQGKAIGEI
Trigger: AATCTCTCCAATGGCCTTGCCCTGAGTCTTTTCTTCCAAGTTCAAGTGAACAGGAGGATTCAAGCATTTGCATACCCGCCTCTTCACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR TCA 90 bp TCGCAGCTAACAACTGATGGCTTGACTCTGAACCCACCCAAAGAGATCCTTCACTTTGCCGTACACTCCTaGCTTTCTGATCCTATAGCA +
Preference number: 2 (lower is better)
Translates to: SQLTTDGLTLNPPKEILHFAVHS*LSDPIA
Trigger: TGCTATAGGATCAGAAAGTCAGGAGTGTACGGCAAA...GTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR GCA 90 bp GAGAAATGTGGATTCCAGTTCCTAGAGCAAAAGCCTTTGGACAGAAATCTCACTTCACCCAGAGTCCTTTaGGTTGGGGCAGCTGAAAGC +
Preference number: 2 (lower is better)
Translates to: EKCGFQFLEQKPLDRNLTSPRVL*VGAAES
Trigger: GCTTTCAGCTGCCCCAACGCAAAGGACTCTGGGTGA...AGTGAGATTTCTGTCCAAAGGCTTTTGCTCTAGGAACTGGAATCCACATTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CCA 90 bp GAGAAATGTGGATTCCAGTTCCTAGAGCAAAAGCCTTTGGACAGAAATCTCACTCCTGCTACTGTTCACTaGTTGAGGACTCACCCCTGC +
Preference number: 2 (lower is better)
Translates to: EKCGFQFLEQKPLDRNLTPATVH*LRTHPC
Trigger: GCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGG...AGTGAGATTTCTGTCCAAAGGCTTTTGCTCTAGGAACTGGAATCCACATTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CCA 90 bp TCGCAGCTAACAACTGATGGCTTGACTCTGAACCCACCCAAAGAGATCCTTCACAAGGGCAATAAAGACTaGTTCTTCTGTCCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: SQLTTDGLTLNPPKEILHKGNKD*FFCPPL
Trigger: AAGAGGGGGACAGAAGAACCAGTCTTTATTGCCCTT...GTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR GCA 90 bp GAGAAATGTGGATTCCAGTTCCTAGAGCAAAAGCCTTTGGACAGAAATCTCACTGGACTCACTCACCCCTaGTACTGTTCACTGGTTGAG +
Preference number: 2 (lower is better)
Translates to: EKCGFQFLEQKPLDRNLTGLTHP*YCSLVE
Trigger: CTCAACCAGTGAACAGTAGCAGGGGTGAGTGAGTCC...AGTGAGATTTCTGTCCAAAGGCTTTTGCTCTAGGAACTGGAATCCACATTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR GCA 90 bp TCGCAGCTAACAACTGATGGCTTGACTCTGAACCCACCCAAAGAGATCCTTCACCAGGACAGATTTCAGTaGCTTTCAATACCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: SQLTTDGLTLNPPKEILHQDRFQ*LSIPQR
Trigger: TCTCTGAGGTATTGAAAGGCACTGAAATCTGTCCTG...GTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CCA 90 bp GGGAATCACAGGAAAATGCCTGACAAGAAGGGATTGGCACATCTAGGCACCAATCTTCTGAAAGGAGTATaGGCACTAGTACCACGAGTA +
Preference number: 2 (lower is better)
Translates to: GNHRKMPDKKGLAHLGTNLLKGV*ALVPRV
Trigger: TACTCGTGGTACTAGTGCCCATACTCCTTTCAGAAG...ATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR TCA 90 bp GAGAAATGTGGATTCCAGTTCCTAGAGCAAAAGCCTTTGGACAGAAATCTCACTAAATACGTAAGGAAGTaGACTGGGGGCATGGGATAC +
Preference number: 2 (lower is better)
Translates to: EKCGFQFLEQKPLDRNLTKYVRK*TGGMGY
Trigger: GTATCCCATGCCCCCAGTTCACTTCCTTACGTATTT...AGTGAGATTTCTGTCCAAAGGCTTTTGCTCTAGGAACTGGAATCCACATTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR GCA 90 bp GAGAAATGTGGATTCCAGTTCCTAGAGCAAAAGCCTTTGGACAGAAATCTCACTCATGGCTGCATTGGGTaGTCCATCATGGAAGTAAAG +
Preference number: 2 (lower is better)
Translates to: EKCGFQFLEQKPLDRNLTHGCIG*SIMEVK
Trigger: CTTTACTTCCATGATGGAGCACCCAATGCAGCCATG...AGTGAGATTTCTGTCCAAAGGCTTTTGCTCTAGGAACTGGAATCCACATTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CCA 90 bp CTCTTCTTGTCCTGTCTGTATTTAAACGGCATTGAAGTCTTCAACTTTAGTACTATTCTCAGGCAGCAGTaGTCCAAGGCACTCGGAGGT +
Preference number: 2 (lower is better)
Translates to: LFLSCLYLNGIEVFNFSTILRQQ*SKALGG
Trigger: ACCTCCGAGTGCCTTGGACCACTGCTGCCTGAGAAT...AGTACTAAAGTTGAAGACTTCAATGCCGTTTAAATACAGACAGGACAAGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR GCA 90 bp AACTTGATACAAGCTAATCATAACAATAGAAGCCCTAAGACACCTTCCCAAAGAGAACCAGGGGCATCTTaGATCCCCCTTAGCAAAGAC +
Preference number: 2 (lower is better)
Translates to: NLIQANHNNRSPKTPSQREPGAS*IPLSKD
Trigger: GTCTTTGCTAAGGGGGATGCAAGATGCCCCTGGTTC...TCTTTGGGAAGGTGTCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CAA 90 bp GAATGCCCAGGGCATATCCAAGTCATAGCCAGAAAGCTTTCAGTTTaGCCAATAACACTCAAGTCTGTTAGAACTATCTGGGACAGTAAA +
Preference number: 2 (lower is better)
Translates to: ECPGHIQVIARKLSV*PITLKSVRTIWDSK
Trigger: TTTACTGTCCCAGATAGTTCTAACAGACTTGAGTGTTATTGGCAAAACTGAAAGCTTTCTGGCTATGACTTGGATATGCCCTGGGCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR TCA 90 bp GAGAAATGTGGATTCCAGTTCCTAGAGCAAAAGCCTTTGGACAGAAATCTCACTATCCTCCTGTTCACTTaGACTTGGAAGAAAAGACTC +
Preference number: 2 (lower is better)
Translates to: EKCGFQFLEQKPLDRNLTILLFT*TWKKRL
Trigger: GAGTCTTTTCTTCCAAGTTCAAGTGAACAGGAGGAT...AGTGAGATTTCTGTCCAAAGGCTTTTGCTCTAGGAACTGGAATCCACATTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR TCA 90 bp TCAAGAGGAAAACCATTTCTTTCGCAGCTAACAACTGATGGCTTGACTCTGAACGGGAAGATGCATATCTaGATTCAACCTCATATACCC +
Preference number: 2 (lower is better)
Translates to: SRGKPFLSQLTTDGLTLNGKMHI*IQPHIP
Trigger: GGGTATATGAGGTTGAATTCAGATATGCATCTTCCC...GTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGAAAGAAATGGTTTTCCTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR GCA 90 bp AACTTGATACAAGCTAATCATAACAATAGAAGCCCTAAGACACCTTCCCAAAGATTGAGGACTCACCCCTaGTACTGTCACTGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: NLIQANHNNRSPKTPSQRLRTHP*YCHCKK
Trigger: CTTCTTGCAGTGACAGTAGCAGGGGTGAGTCCTCAA...TCTTTGGGAAGGTGTCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CCA 90 bp AATATCACGGAGTCACAAGCCATCAATCAATATTCATTCATAAAGACTGTGACACCCAGCATGCCACCATaGGAAAGGTTTGTTCATGCA +
Preference number: 2 (lower is better)
Translates to: NITESQAINQYSFIKTVTPSMPP*ERFVHA
Trigger: TGCATGAACAAACCTTTCCCATGGTGGCATGCTGGG...TGTCACAGTCTTTATGAATGAATATTGATTGATGGCTTGTGACTCCGTGATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CAA 90 bp AACTCCTTCATCCATAGCTTCAGGCCAGGTAGTTTTTATGACAACTaGATACAAGCTAATCATAACAATAGAAGCCCTAAGACACCTTCC +
Preference number: 2 (lower is better)
Translates to: NSFIHSFRPGSFYDN*IQANHNNRSPKTPS
Trigger: GGAAGGTGTCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTTGTCATAAAAACTACCTGGCCTGAAGCTATGGATGAAGGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR GCA 90 bp CTCTTCTTGTCCTGTCTGTATTTAAACGGCATTGAAGTCTTCAACTTTAGTACTGGAAAGGTTTGTTCATaGAGACAGATGGCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: LFLSCLYLNGIEVFNFSTGKVCS*RQMASS
Trigger: AGAACTGGCCATCTGTCTGCATGAACAAACCTTTCC...AGTACTAAAGTTGAAGACTTCAATGCCGTTTAAATACAGACAGGACAAGAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR GCA 90 bp GAGAAATGTGGATTCCAGTTCCTAGAGCAAAAGCCTTTGGACAGAAATCTCACTACTCAGATTTTCAAGTaGAAATCTTATGGTGACACG +
Preference number: 2 (lower is better)
Translates to: EKCGFQFLEQKPLDRNLTTQIFK*KSYGDT
Trigger: CGTGTCACCATAAGATTTGCACTTGAAAATCTGAGT...AGTGAGATTTCTGTCCAAAGGCTTTTGCTCTAGGAACTGGAATCCACATTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR TCA 90 bp AATATCACGGAGTCACAAGCCATCAATCAATATTCATTCATAAAGACTGTGACATCTTTACCTGCAAAATaGGGTGAGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: NITESQAINQYSFIKTVTSLPAK*GECVCV
Trigger: CACACACACACACTCACCTCATTTTGCAGGTAAAGA...TGTCACAGTCTTTATGAATGAATATTGATTGATGGCTTGTGACTCCGTGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 72 bp GCTGAAGGGGATGGGACTCAGCGTTCGCCGTCTCAGTaGAGGAAGCAGCGCTGGCAGGGAGCCCTGCTCCAC +
Preference number: 3 (lower is better)
Translates to: AEGDGTQRSPSQ*RKQRWQGALLH
Trigger: GTGGAGCAGGGCTCCCTGCCAGCGCTGCTTCCTGCACTGAGACGGCGAACGCTGAGTCCCATCCCCTTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 72 bp CTCCACTGTCCCTGTGTCACCACAGGCAGGGGCATCTaGAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATG +
Preference number: 3 (lower is better)
Translates to: LHCPCVTTGRGI*RPNKLVVEPSM
Trigger: CATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCCTGTGGTGACACAGGGACAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 72 bp AGTCCCAAGCTCCCTGGAAACCCTCTAGCACCCTTCTaGTTCCTTCCCTCCTTCTTCACACCAGGGCCTGGT +
Preference number: 3 (lower is better)
Translates to: SPKLPGNPLAPF*FLPSFFTPGPG
Trigger: ACCAGGCCCTGGTGTGAAGAAGGAGGGAAGGAACCAGAAGGGTGCTAGAGGGTTTCCAGGGAGCTTGGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 72 bp CTGGTTGAGGACTCACCCCTGCTACTGTTCACTGGTTaGGGACTCACCCCTGCTACTGTTCACTGGTTGAGG +
Preference number: 3 (lower is better)
Translates to: LVEDSPLLLFTG*GLTPATVHWLR
Trigger: CCTCAACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 72 bp GTGAGGACTCACTCACCCCTGCTACTGTTCACTGGTTaGGGACTCACCCCTGCTACTGTTCACTGGTTGAGG +
Preference number: 3 (lower is better)
Translates to: VRTHSPLLLFTG*GLTPATVHWLR
Trigger: CCTCAACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTGAGTGAGTCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 72 bp AGTGACAAGGTGGCCATTGTCCCATCTCAGCTCCCGTaGCACGCCTTGTTTTACCCAGGGGATCTGCAGTGT +
Preference number: 3 (lower is better)
Translates to: SDKVAIVPSQLP*HALFYPGDLQC
Trigger: ACACTGCAGATCCCCTGGGTAAAACAAGGCGTGTCACGGGAGCTGAGATGGGACAATGGCCACCTTGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 72 bp AAGGCATCCACACCTGAGAGTGGCCCACCCCAACTATaGACGTGGGCTCTTTCCCTCAAAGGAGACAGTAGA +
Preference number: 3 (lower is better)
Translates to: KASTPESGPPQL*TWALSLKGDSR
Trigger: TCTACTGTCTCCTTTGAGGGAAAGAGCCCACGTGCATAGTTGGGGTGGGCCACTCTCAGGTGTGGATGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 72 bp TGCTCCTCTGATGGCTGTGATGAACCAGGGGCATCTTaGATCCCCCTTAGCAAAGACGTGAAGAGGCGGGTA +
Preference number: 3 (lower is better)
Translates to: CSSDGCDEPGAS*IPLSKDVKRRV
Trigger: TACCCGCCTCTTCACGTCTTTGCTAAGGGGGATGCAAGATGCCCCTGGTTCATCACAGCCATCAGAGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 72 bp CAGGGTGAGGACTCACTCACCCCTGCTACTGTTCACTaGTTGAGGACTCACCCCTGCTACTGTTCACTGGTT +
Preference number: 3 (lower is better)
Translates to: QGEDSLTPATVH*LRTHPCYCSLV
Trigger: AACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTGAGTGAGTCCTCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 72 bp CTGGTTGAGGACTCACCCCTGCTACTGTTCACTGGTTaGGGACTCACCCCTGCTACTGTCACTGCAAGAAGA +
Preference number: 3 (lower is better)
Translates to: LVEDSPLLLFTG*GLTPATVTARR
Trigger: TCTTCTTGCAGTGACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 72 bp ACCCCTGCTACTGTTCACTGGTTGAGGACTCACCCCTaGTACTGTCACTGCAAGAAGAGGCAGAGGATTTGG +
Preference number: 3 (lower is better)
Translates to: TPATVHWLRTHP*YCHCKKRQRIW
Trigger: CCAAATCCTCTGCCTCTTCTTGCAGTGACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 72 bp ATGCCACCATGGGAAAGGTTTGTTCATGCAGACAGATaGCCAGTTCTGGACGTTCCACGGGCTGAAGGGGAT +
Preference number: 3 (lower is better)
Translates to: MPPWERFVHADR*PVLDVPRAEGD
Trigger: ATCCCCTTCAGCCCGTGGAACGTCCAGAACTGGCCATCTGTCTGCATGAACAAACCTTTCCCATGGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 72 bp TGGCCACACCCATGCAGTCTCAAATACGTAAGGAAGTaGACTGGGGGCATGGGATACCATCTCCACCGTCTT +
Preference number: 3 (lower is better)
Translates to: WPHPCSLKYVRK*TGGMGYHLHRL
Trigger: AAGACGGTGGAGATGGTATCCCATGCCCCCAGTTCACTTCCTTACGTATTTGAGACTGCATGGGTGTGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 72 bp AGGAATTGTGACAGGGTGAGCAAGAGGCAACTTAGATaGGCTCAGGCATGCCTGTGGGGGTCTGAAGAGTCA +
Preference number: 3 (lower is better)
Translates to: RNCDRVSKRQLR*AQACLWGSEES
Trigger: TGACTCTTCAGACCCCCACAGGCATGCCTGAGCTCATCTAAGTTGCCTCTTGCTCACCCTGTCACAATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 72 bp AGCTCCCGTGACACGCCTTGTTTTACCCAGGGGATCTaGAGTGTGGCTAACTGTATGATTTCTCTGGCTGGA +
Preference number: 3 (lower is better)
Translates to: SSRDTPCFTQGI*SVANCMISLAG
Trigger: TCCAGCCAGAGAAATCATACAGTTAGCCACACTGCAGATCCCCTGGGTAAAACAAGGCGTGTCACGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 72 bp TCGATCTGGAAGCACCTGGAAGGGAAAGACTCGACTTaGAAAGCAGTGACAAGGTGGCCATTGTCCCATCTC +
Preference number: 3 (lower is better)
Translates to: SIWKHLEGKDST*KAVTRWPLSHL
Trigger: GAGATGGGACAATGGCCACCTTGTCACTGCTTTCCAAGTCGAGTCTTTCCCTTCCAGGTGCTTCCAGATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CAA 90 bp TTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTACCTGTTCACTTGAACTaGGAAGAAAAGACTCAGGGC +
Preference number: 3 (lower is better)
Translates to: FQSPCAFHGCIGCSIMEVPVHLN*EEKTQG
Trigger: GCCCTGAGTCTTTTCTTCCAAGTTCAAGTGAACAGG...TACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CAA 90 bp TCGCAGCTAACAACTGATGGCTTGACTCTGAACCCACCCAAAGAGATCCTTCACAGGGAAAGACTCGACTaGGAAAGCAGTGACAAGGTG +
Preference number: 3 (lower is better)
Translates to: SQLTTDGLTLNPPKEILHRERLD*ESSDKV
Trigger: CACCTTGTCACTGCTTTCCAAGTCGAGTCTTTCCCT...GTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 72 bp AAGAGCTTCCATGGAATCCAAGGCATAGCAAGTGACTaGTGTGTGGTGTGGGCCATTTGTCAGGAGAATGTC +
Preference number: 3 (lower is better)
Translates to: KSFHGIQGIASD*CVVWAICQENV
Trigger: GACATTCTCCTGACAAATGGCCCACACCACACAGCAGTCACTTGCTATGCCTTGGATTCCATGGAAGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 72 bp AAGACTCAGGGCAAGGCCATTGGAGAGATTCGAGAATaGCCAGGGCATATCCAAGTCATAGCCAGAAAGCTT +
Preference number: 3 (lower is better)
Translates to: KTQGKAIGEIRE*PGHIQVIARKL
Trigger: AAGCTTTCTGGCTATGACTTGGATATGCCCTGGGCATTCTCGAATCTCTCCAATGGCCTTGCCCTGAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 72 bp TTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTaGTCCATCATGGAAGTAAAGAGACTCTTGTGGCTT +
Preference number: 3 (lower is better)
Translates to: FQSPCAFHGCIG*SIMEVKRLLWL
Trigger: AAGCCACAAGAGTCTCTTTACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 72 bp AACCAGCACCTACCTACGCCATCACCCAGAGTCCTTTaGGTTGGGGCAGCTGAAAGCTATTATTTTCATGAC +
Preference number: 3 (lower is better)
Translates to: NQHLPTPSPRVL*VGAAESYYFHD
Trigger: GTCATGAAAATAATAGCTTTCAGCTGCCCCAACGCAAAGGACTCTGGGTGATGGCGTAGGTAGGTGCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CAA 90 bp GGGAGCTTTGAGACCATTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGGTTAGAGATGTTATCTaGGGGTATGTCATATGTGAG +
Preference number: 3 (lower is better)
Translates to: GSFETISEPVCFPWLHWVVRDVI*GYVICE
Trigger: CTCACATATGACATACCCCAAGATAACATCTCTAAC...CACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAATGGTCTCAAAGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 72 bp CACACTAGCGTGAATTGTATAGCAGGCTGTTTCTATTaGATGTACCAAGGGGCTAGAACTGTGCCTGGCCCT +
Preference number: 3 (lower is better)
Translates to: HTSVNCIAGCFY*MYQGARTVPGP
Trigger: AGGGCCAGGCACAGTTCTAGCCCCTTGGTACATTCAATAGAAACAGCCTGCTATACAATTCACGCTAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 72 bp AGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTaGCACTTTCAGGAGGTTGTACATGTCAGGGATGCA +
Preference number: 3 (lower is better)
Translates to: REPCGSWSVLSI*HFQEVVHVRDA
Trigger: TGCATCCCTGACATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 72 bp TTCCTTAGAATAAAGGAGGCCAGGGCAGAAAAGACCTaGCCACACCCATGCAGTCTCAAATACGTAAGGAAG +
Preference number: 3 (lower is better)
Translates to: FLRIKEARAEKT*PHPCSLKYVRK
Trigger: CTTCCTTACGTATTTGAGACTGCATGGGTGTGGCCAGGTCTTTTCTGCCCTGGCCTCCTTTATTCTAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 72 bp TTAGCTGGACCAAGAATAGAACCCAGGACCCTCACATaGGCTAATAAGCAAGTGAGCTACACCTTCAGCACT +
Preference number: 3 (lower is better)
Translates to: LAGPRIEPRTLT*ANKQVSYTFST
Trigger: AGTGCTGAAGGTGTAGCTCACTTGCTTATTAGCTCATGTGAGGGTCCTGGGTTCTATTCTTGGTCCAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 72 bp CCCCTTAGCAAAGACGTGAAGAGGCGGGTATGCAAATaGTTGAATCCTCCTGTTCACTTGAACTTGGAAGAA +
Preference number: 3 (lower is better)
Translates to: PLSKDVKRRVCK*LNPPVHLNLEE
Trigger: TTCTTCCAAGTTCAAGTGAACAGGAGGATTCAAGCATTTGCATACCCGCCTCTTCACGTCTTTGCTAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR GCA 72 bp GCTGTTTCTATTGAATGTACCAAGGGGCTAGAACTGTaGCTGGCCCTCAGCAAGTGTATACTGAAGGAAATC +
Preference number: 3 (lower is better)
Translates to: AVSIECTKGLEL*LALSKCILKEI
Trigger: GATTTCCTTCAGTATACACTTGCTGAGGGCCAGGCACAGTTCTAGCCCCTTGGTACATTCAATAGAAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 72 bp ACAGTAGACTTTAGGGAGAGAGAACCATGTGGCTCCTaGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTT +
Preference number: 3 (lower is better)
Translates to: TVDFREREPCGS*SVLSIWHFQEV
Trigger: AACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCTAAAGTCTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CAA 90 bp AACTTGATACAAGCTAATCATAACAATAGAAGCCCTAAGACACCTTCCCAAAGAGGTGACACGGGAGCTTaGAGACCATTTCAGAGCCCG +
Preference number: 3 (lower is better)
Translates to: NLIQANHNNRSPKTPSQRGDTGA*RPFQSP
Trigger: CGGGCTCTGAAATGGTCTCAAAGCTCCCGTGTCACC...TCTTTGGGAAGGTGTCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 72 bp CTCAAGAGGAAAACCATTTCTTTCGCAGCTAACAACTaGTGGCTTGACTCTGAACCCACCCAAAGAGATCCT +
Preference number: 3 (lower is better)
Translates to: LKRKTISFAANN*WLDSEPTQRDP
Trigger: AGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGAAAGAAATGGTTTTCCTCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 72 bp AACAAACACTCAGATTTTCAAGTGCAAATCTTATGGTaGCACGGGAGCTTTGAGACCATTTCAGAGCCCGTG +
Preference number: 3 (lower is better)
Translates to: NKHSDFQVQILW*HGSFETISEPV
Trigger: CACGGGCTCTGAAATGGTCTCAAAGCTCCCGTGTCACCATAAGATTTGCACTTGAAAATCTGAGTGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CCA 72 bp CTCCATCATGGAAGTAAAGAGACTCTTGTGGCTTTCTaGGGTGTGTATACTAACTTTTCTAGTGCTGTGCCA +
Preference number: 3 (lower is better)
Translates to: LHHGSKETLVAF*GVYTNFSSAVP
Trigger: TGGCACAGCACTAGAAAAGTTAGTATACACACCCCAGAAAGCCACAAGAGTCTCTTTACTTCCATGATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CAA 90 bp AACTTGATACAAGCTAATCATAACAATAGAAGCCCTAAGACACCTTCCCAAAGAGTGAGCAAGCTGGGCTaGTTAGTAAAAGCCTATAGT +
Preference number: 3 (lower is better)
Translates to: NLIQANHNNRSPKTPSQRVSKLG*LVKAYS
Trigger: ACTATAGGCTTTTACTAACAAGCCCAGCTTGCTCAC...TCTTTGGGAAGGTGTCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CAA 90 bp AATATCACGGAGTCACAAGCCATCAATCAATATTCATTCATAAAGACTGTGACACTTAGAGCCCAGGATTaGAGCTCAAAGGAAGAAGAT +
Preference number: 3 (lower is better)
Translates to: NITESQAINQYSFIKTVTLRAQD*SSKEED
Trigger: ATCTTCTTCCTTTGAGCTCAAATCCTGGGCTCTAAG...TGTCACAGTCTTTATGAATGAATATTGATTGATGGCTTGTGACTCCGTGATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR TCA 72 bp TCCATAGCTTCAGGCCAGGTAGTTTTTATGACAACTTaGTACAAGCTAATCATAACAATAGAAGCCCTAAGA +
Preference number: 3 (lower is better)
Translates to: SIASGQVVFMTT*YKLIITIEALR
Trigger: TCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTTGTCATAAAAACTACCTGGCCTGAAGCTATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR-3UTR CAA 90 bp AACTTGATACAAGCTAATCATAACAATAGAAGCCCTAAGACACCTTCCCAAAGAAGAAAGCTTTCAGTTTaGCCAATAACACTCAAGTCT +
Preference number: 3 (lower is better)
Translates to: NLIQANHNNRSPKTPSQRRKLSV*PITLKS
Trigger: AGACTTGAGTGTTATTGGCAAAACTGAAAGCTTTCT...TCTTTGGGAAGGTGTCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp CCCTGCTCCACAGGCCGCCCTTCCTGGGCGCCATTCTCAGGCAGCAGTGGTCCATGCAGCGGCTTGAGCTaGTCCGTCAGCTTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PCSTGRPSWAPFSGSSGPCSGLS*SVSFSP
Trigger: CGGGGAGAAGCTGACGGAGCAGCTCAAGCCGCTGCA...TGGACCACTGCTGCCTGAGAATGGCGCCCAGGAAGGGCGGCCTGTGGAGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp CCCTGCTCCACAGGCCGCCCTTCCTGGGCGCCATTCTCAGGCAGCAGTGGTCCACGAGCCTGCACGGCTTaGCTTCCTCTCTGTCATGCT +
Preference number: 4 (lower is better)
Translates to: PCSTGRPSWAPFSGSSGPRACTA*LPLCHA
Trigger: AGCATGACAGAGAGGAAGCCAAGCCGTGCAGGCTCG...TGGACCACTGCTGCCTGAGAATGGCGCCCAGGAAGGGCGGCCTGTGGAGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp CCCTGCTCCACAGGCCGCCCTTCCTGGGCGCCATTCTCAGGCAGCAGTGGTCCACACAGGTGTGCTTCTTaGCCTCCTTCAGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: PCSTGRPSWAPFSGSSGPHRCAS*PPSAPC
Trigger: GCATGGAGCTGAAGGAGGGCAAGAAGCACACCTGTG...TGGACCACTGCTGCCTGAGAATGGCGCCCAGGAAGGGCGGCCTGTGGAGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp CCCTGCTCCACAGGCCGCCCTTCCTGGGCGCCATTCTCAGGCAGCAGTGGTCCAGTGCCAAGGTGGCGCTaGAGTGCTTATAAATGTAGG +
Preference number: 4 (lower is better)
Translates to: PCSTGRPSWAPFSGSSGPVPRWR*SAYKCR
Trigger: CCTACATTTATAAGCACTTCAGCGCCACCTTGGCAC...TGGACCACTGCTGCCTGAGAATGGCGCCCAGGAAGGGCGGCCTGTGGAGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp CCCTGCTCCACAGGCCGCCCTTCCTGGGCGCCATTCTCAGGCAGCAGTGGTCCAAAGGTACTTCAAGGCTaGCCCCTTGATCTTGACAGC +
Preference number: 4 (lower is better)
Translates to: PCSTGRPSWAPFSGSSGPKVLQG*PLDLDS
Trigger: GCTGTCAAGATCAAGGGGGCAGCCTTGAAGTACCTT...TGGACCACTGCTGCCTGAGAATGGCGCCCAGGAAGGGCGGCCTGTGGAGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp CCCTGCTCCACAGGCCGCCCTTCCTGGGCGCCATTCTCAGGCAGCAGTGGTCCATTCTCCTTTCCGGAATaGCCGGGAATAGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: PCSTGRPSWAPFSGSSGPFSFPE*PGIAEL
Trigger: CAGTTCAGCTATTCCCGGCCATTCCGGAAAGGAGAA...TGGACCACTGCTGCCTGAGAATGGCGCCCAGGAAGGGCGGCCTGTGGAGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp CCCTGCTCCACAGGCCGCCCTTCCTGGGCGCCATTCTCAGGCAGCAGTGGTCCAGATGTCTTCTCCTGGTaGTGTGGTACTGGTCATCTT +
Preference number: 4 (lower is better)
Translates to: PCSTGRPSWAPFSGSSGPDVFSW*CGTGHL
Trigger: AAGATGACCAGTACCACACCACCAGGAGAAGACATC...TGGACCACTGCTGCCTGAGAATGGCGCCCAGGAAGGGCGGCCTGTGGAGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp CCCTGCTCCACAGGCCGCCCTTCCTGGGCGCCATTCTCAGGCAGCAGTGGTCCAAGACTGTATGTCATTTaGTGCAGCTGGCGGAATAGT +
Preference number: 4 (lower is better)
Translates to: PCSTGRPSWAPFSGSSGPRLYVI*CSWRNS
Trigger: ACTATTCCGCCAGCTGCAGCAAATGACATACAGTCT...TGGACCACTGCTGCCTGAGAATGGCGCCCAGGAAGGGCGGCCTGTGGAGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp ACCACAGGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGTCTCCGGACAGGCAGTaGGGGAGCAATCTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: TTGRGICRPNKLVVEPSMSPDRQ*GSNLSR
Trigger: TCGGCTGAGATTGCTCCCCCACTGCCTGTCCGGAGA...CATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCCTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp ACCACAGGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGAGCCTTTGGAGGGGGTaGAGGTGGGGCTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: TTGRGICRPNKLVVEPSMSLWRG*RWGFGV
Trigger: GACTCCAAAGCCCCACCTCCACCCCCTCCAAAGGCT...CATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCCTGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp CACCCCTGCTACTGTTCACTGGTTGAGGACTCACCCCTGCTACTGTTCACTGGTAGAGCTTGCGCCAGATaGCGGCCCATTCTCGTAGCG +
Preference number: 4 (lower is better)
Translates to: HPCYCSLVEDSPLLLFTGRACAR*RPILVA
Trigger: CGCTACGAGAATGGGCCGTCATCTGGCGCAAGCTCT...ACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp CCCTGCTCCACAGGCCGCCCTTCCTGGGCGCCATTCTCAGGCAGCAGTGGTCCACCTGATCCAGCTTTGTaGTCAACTCATTCTCAAACA +
Preference number: 4 (lower is better)
Translates to: PCSTGRPSWAPFSGSSGPPDPAL*STHSQT
Trigger: TGTTTGAGAATGAGTTGATCACAAAGCTGGATCAGG...TGGACCACTGCTGCCTGAGAATGGCGCCCAGGAAGGGCGGCCTGTGGAGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp CACCCCTGCTACTGTTCACTGGTTGAGGACTCACCCCTGCTACTGTTCACTGGTCGGAGCCCACAGGTGTaGTTCTTGCCCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: HPCYCSLVEDSPLLLFTGRSPQV*FLPSFS
Trigger: GCTGAAGGAGGGCAAGAAGCACACCTGTGGGCTCCG...ACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp CACCCCTGCTACTGTTCACTGGTTGAGGACTCACCCCTGCTACTGTTCACTGGTTCGTGCCTCCCATCCTaGAGCGTGGTACCATCTGCG +
Preference number: 4 (lower is better)
Translates to: HPCYCSLVEDSPLLLFTGSCLPS*SVVPSA
Trigger: CGCAGATGGTACCACGCTGCAGGATGGGAGGCACGA...ACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp GGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGCCACCAGGCTTGTCCGACCACTaGAGAAGCTCAGCATGTAGG +
Preference number: 4 (lower is better)
Translates to: GRGICRPNKLVVEPSMPPGLSDH*RSSACR
Trigger: CCTACATGCTGAGCTTCTGCAGTGGTCGGACAAGCC...TGGTGGCATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp CACCCCTGCTACTGTTCACTGGTTGAGGACTCACCCCTGCTACTGTTCACTGGTGAAGATAGCCGGGCATaGAGCGGCTTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HPCYCSLVEDSPLLLFTGEDSRA*SGLSCS
Trigger: GGAGCAGCTCAAGCCGCTGCATGCCCGGCTATCTTC...ACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GCAGTGACAAGGTGGCCATTGTCCCATCTCAGCTCCCGTGACACGCCTTGTTTTCACGAGGCTGATGCGTaGCCGGATGAGGTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: AVTRWPLSHLSSRDTPCFHEADA*PDEVCA
Trigger: AGCACAGACCTCATCCGGCCACGCATCAGCCTCGTG...AAAACAAGGCGTGTCACGGGAGCTGAGATGGGACAATGGCCACCTTGTCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGCCACCACATACGGTTTGCTTTTaGGGGGAGGTGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GRGICRPNKLVVEPSMPPHTVCF*GEVEEG
Trigger: TCCCTCCTCCACCTCCCCCCAAAAGCAAACCGTATG...TGGTGGCATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp GGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGCCACCAGTTGCGCTTGGCTTCTaGGAAGGTTTCAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GRGICRPNKLVVEPSMPPVALGF*EGFKLE
Trigger: CTCCAGCTTGAAACCTTCTCAGAAGCCAAGCGCAAC...TGGTGGCATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp AGGGAGAGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGAGGAGGCCACAGAGGTaGCAGACAGCCTGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: REREPCGSWSVLSIWHFQRRPQR*QTACAA
Trigger: CGCTGCGCAGGCTGTCTGTCACCTCTGTGGCCTCCT...CTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGCCACCAGAGAAGGTTTCAAGCTaGAGGGACTCGTGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: GRGICRPNKLVVEPSMPPEKVSS*RDSWVR
Trigger: TCTCACCCACGAGTCCCTCCAGCTTGAAACCTTCTC...TGGTGGCATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp TTCCCAAAGAGGTTATTCTGCCAGGGCCTTGTAAACCAGCACCTACCTACGCCATGGAGGGGGTGGAGGTaGGGCTTTGGAGTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: FPKRLFCQGLVNQHLPTPWRGWR*GFGVSP
Trigger: CGGAGAGACTCCAAAGCCCCACCTCCACCCCCTCCA...TGGCGTAGGTAGGTGCTGGTTTACAAGGCCCTGGCAGAATAACCTCTTTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GAATGTCAGAATGTGAGCCTGCGGTATCTCCAGAGAAGGCATCCACACCTGAGAGAGTGGTCGTCCAGCTaGCCACTGAGCTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: ECQNVSLRYLQRRHPHLREWSSS*PLSWSV
Trigger: GACAGACCAGCTCAGTGGCCAGCTGGACGACCACTC...TCTCAGGTGTGGATGCCTTCTCTGGAGATACCGCAGGCTCACATTCTGACATTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp TTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTAAGAGGCGAGGGACTGTaGAATGGTGTCAGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: FQSPCAFHGCIGCSIMEVRGEGL*NGVSRL
Trigger: CAGCCGGCTGACACCATTCCACAGTCCCTCGCCTCT...TACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CAA 72 bp GGTGAGGACTCACTCACCCCTGCTACTGTTCACTGGTaGAGGACTCACCCCTGCTACTGTTCACTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: GEDSLTPATVHW*RTHPCYCSLVE
Trigger: CTCAACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTGAGTGAGTCCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp GGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGCCACCACCCAAAGGCTCGCTCTaGTTTATCTCTGGATTCTTG +
Preference number: 4 (lower is better)
Translates to: GRGICRPNKLVVEPSMPPPKGSL*FISGFL
Trigger: CAAGAATCCAGAGATAAATCAGAGCGAGCCTTTGGG...TGGTGGCATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp GGGAATCACAGGAAAATGCCTGACAAGAAGGGATTGGCACATCTAGGCACCAATTCGTGGCTTTGGGAGTaGGTGGGGGTGGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GNHRKMPDKKGLAHLGTNSWLWE*VGVGSR
Trigger: CCTTGAGCCCACCCCCACTCACTCCCAAAGCCACGA...ATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp GGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGCCACCACTGTATGTCATTTGCTaGAGCTGGCGGAATAGTGTG +
Preference number: 4 (lower is better)
Translates to: GRGICRPNKLVVEPSMPPLYVIC*SWRNSV
Trigger: CACACTATTCCGCCAGCTGCAGCAAATGACATACAG...TGGTGGCATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp GGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGCCACCATCGGTGAACACTGCTTaGAGGTTATTCAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GRGICRPNKLVVEPSMPPSVNTA*RLFSFS
Trigger: CGAGAAGCTGAATAACCTGCAAGCAGTGTTCACCGA...TGGTGGCATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp TTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTAGCTTCTCGATCTCCTTaGGCATCCCGTTACTGCCCC +
Preference number: 4 (lower is better)
Translates to: FQSPCAFHGCIGCSIMEVASRSP*ASRYCP
Trigger: GGGGCAGTAACGGGATGCCCAAGGAGATCGAGAAGC...TACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp ACCACAGGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGAGCAGGTCCACATTTTaGGTGAGCTTTGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TTGRGICRPNKLVVEPSMSRSTF*VSFVEQ
Trigger: CTGCTCCACAAAGCTCACCCAAAATGTGGACCTGCT...CATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GCAGTGACAAGGTGGCCATTGTCCCATCTCAGCTCCCGTGACACGCCTTGTTTTGTTTGTCCTTGTAGCTaGGCGGCAAGCTCATCACAG +
Preference number: 4 (lower is better)
Translates to: AVTRWPLSHLSSRDTPCFVCPCS*AASSSQ
Trigger: CTGTGATGAGCTTGCCGCCCAGCTACAAGGACAAAC...AAAACAAGGCGTGTCACGGGAGCTGAGATGGGACAATGGCCACCTTGTCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp TCGCAGCTAACAACTGATGGCTTGACTCTGAACCCACCCAAAGAGATCCTTCACGTGGAGGTGGGGCTTTaGAGTCTCTCCGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: SQLTTDGLTLNPPKEILHVEVGL*SLSGQA
Trigger: TGCCTGTCCGGAGAGACTCCAAAGCCCCACCTCCAC...GTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp GCAGTGACAAGGTGGCCATTGTCCCATCTCAGCTCCCGTGACACGCCTTGTTTTTCTGTCCACCAGGTGTaGAAAGTTCTTCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: AVTRWPLSHLSSRDTPCFSVHQV*KVLLHL
Trigger: CAGGTGCAGAAGAACTTTTCACACCTGGTGGACAGA...AAAACAAGGCGTGTCACGGGAGCTGAGATGGGACAATGGCCACCTTGTCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp GGGAGCTTTGAGACCATTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGTGTCCATCAGCGTGTTaGAAGCAAGAAACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSFETISEPVCFPWLHWVCPSAC*KQETAG
Trigger: GCCAGCTGTTTCTTGCTTTCAACACGCTGATGGACA...CACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAATGGTCTCAAAGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp TTCCCAAAGAGGTTATTCTGCCAGGGCCTTGTAAACCAGCACCTACCTACGCCATCAGCAGCCTCTCCATaGTCAGCTGTACGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: FPKRLFCQGLVNQHLPTPSAASP*SAVREL
Trigger: CAGCTCACGTACAGCTGATCATGGAGAGGCTGCTGA...TGGCGTAGGTAGGTGCTGGTTTACAAGGCCCTGGCAGAATAACCTCTTTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATTACACCACCAGGTCGTaGCTCCCATCCTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHYTTRS*LPSCSV
Trigger: CACGCTGCAGGATGGGAGGCACGACCTGGTGGTGTA...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp GGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGCCACCAATGCAGTTAAGTTTCTaGCGCACCAACTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: GRGICRPNKLVVEPSMPPMQLSF*RTNWLS
Trigger: TGACAACCAGTTGGTGCGGCAGAAACTTAACTGCAT...TGGTGGCATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp GAATGTCAGAATGTGAGCCTGCGGTATCTCCAGAGAAGGCATCCACACCTGAGAGCAGCAGCACTTCCCTaGACTCTGCCTGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: ECQNVSLRYLQRRHPHLRAAALP*TLPAGK
Trigger: TTTTCCAGCAGGCAGAGTGCAGGGAAGTGCTGCTGC...TCTCAGGTGTGGATGCCTTCTCTGGAGATACCGCAGGCTCACATTCTGACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp CACCCCTGCTACTGTTCACTGGTTGAGGACTCACCCCTGCTACTGTTCACTGGTTGCAAGCCACAAAGCTaGCAATGTGAGGAGACTGTC +
Preference number: 4 (lower is better)
Translates to: HPCYCSLVEDSPLLLFTGCKPQS*QCEETV
Trigger: GACAGTCTCCTCACATTGGCAGCTTTGTGGCTTGCA...ACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp AGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTAAAGAGATACATCTCCAGGATGTaGACGGTGTCGCCGATCTGC +
Preference number: 4 (lower is better)
Translates to: SPCAFHGCIGCSIMEVKRYISRM*TVSPIC
Trigger: GCAGATCGGCGACACCGTCCACATCCTGGAGATGTA...TCTCTTTACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GCAGTGACAAGGTGGCCATTGTCCCATCTCAGCTCCCGTGACACGCCTTGTTTTCATTGTCAGAAGAGTTaGAGGAGGTGGAGATCACCG +
Preference number: 4 (lower is better)
Translates to: AVTRWPLSHLSSRDTPCFHCQKS*RRWRSP
Trigger: CGGTGATCTCCACCTCCTCCAACTCTTCTGACAATG...AAAACAAGGCGTGTCACGGGAGCTGAGATGGGACAATGGCCACCTTGTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GGGAATCACAGGAAAATGCCTGACAAGAAGGGATTGGCACATCTAGGCACCAATGGGAGTGAGTGGGGGTaGGCTCAAGGCTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: GNHRKMPDKKGLAHLGTNGSEWG*AQGCRL
Trigger: CAGTCTACAGCCTTGAGCCCACCCCCACTCACTCCC...ATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CAA 72 bp CTCGATCTGGAAGCACCTGGAAGGGAAAGACTCGACTaGGAAAGCAGTGACAAGGTGGCCATTGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: LDLEAPGRERLD*ESSDKVAIVPS
Trigger: AGATGGGACAATGGCCACCTTGTCACTGCTTTCCAAGTCGAGTCTTTCCCTTCCAGGTGCTTCCAGATCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp TTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTAAGGTGTGGACAGTACTaGAGATTGCCTGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: FQSPCAFHGCIGCSIMEVRCGQY*RLPGLS
Trigger: TGAGAGGCCAGGCAATCTTCAGTACTGTCCACACCT...TACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp ACCACAGGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGAGACCTTGTCCTTTGTaGTTCACTTCCTTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TTGRGICRPNKLVVEPSMRPCPL*FTSFAA
Trigger: AGCTGCAAAGGAAGTGAATCACAAAGGACAAGGTCT...CATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCCTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp GCAGTGACAAGGTGGCCATTGTCCCATCTCAGCTCCCGTGACACGCCTTGTTTTTCACTGTACAGCTCATaGGGTTCTCCTTGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: AVTRWPLSHLSSRDTPCFSLYSS*GSPCSH
Trigger: ATGAGAGCAAGGAGAACCGCATGAGCTGTACAGTGA...AAAACAAGGCGTGTCACGGGAGCTGAGATGGGACAATGGCCACCTTGTCACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp TTCCCAAAGAGGTTATTCTGCCAGGGCCTTGTAAACCAGCACCTACCTACGCCACACCCGATGAAGCTCTaGGTTCAAACAGGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: FPKRLFCQGLVNQHLPTPHPMKL*VQTGVP
Trigger: TGGAACCCCTGTTTGAACGCAGAGCTTCATCGGGTG...TGGCGTAGGTAGGTGCTGGTTTACAAGGCCCTGGCAGAATAACCTCTTTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATTCCCTCTGCAGCAAATaGGGCACACAGGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHSLCSK*GTQGLS
Trigger: GGACAAGCCCTGTGTGCCCCATTTGCTGCAGAGGGA...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp AGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTAAAGAGATCAGCATTGGGGAACTaGGTCAGCAACCTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SPCAFHGCIGCSIMEVKRSALGN*VSNLKL
Trigger: CAGCTTGAGGTTGCTGACCCAGTTCCCCAATGCTGA...TCTCTTTACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GGGAGCTTTGAGACCATTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTTGATGTCTTCTCCTaGTGGTGTGGTACTGGTCAT +
Preference number: 4 (lower is better)
Translates to: GSFETISEPVCFPWLHWVLDVFS*WCGTGH
Trigger: ATGACCAGTACCACACCACCAGGAGAAGACATCAAG...CACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAATGGTCTCAAAGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp ACCACAGGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGACTGCTGCACTTCGTTaGCTCTGTAGTAGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: TTGRGICRPNKLVVEPSMTAALR*LCSSSR
Trigger: TCTTGAACTACTACAGAGCCAACGAAGTGCAGCAGT...CATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCCTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp TTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTAGCAGATCTTCAACTCTaGCACCCGATGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FQSPCAFHGCIGCSIMEVADLQL*HPMKLC
Trigger: GCAGAGCTTCATCGGGTGCCAGAGTTGAAGATCTGC...TACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATCAATCACGGTCCGGTTaGTCCTTCTCAGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHQSRSG*SFSAAS
Trigger: AGAGGCTGCTGAGAAGGATCAACCGGACCGTGATTG...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp AGGGAGAGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGACAAAGCTGCCAATGTaGGGAGACTGTCGGCTCATC +
Preference number: 4 (lower is better)
Translates to: REREPCGSWSVLSIWHFQTKLPM*GDCRLI
Trigger: GATGAGCCGACAGTCTCCTCACATTGGCAGCTTTGT...CTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATCTTCAGGGGTCAGAGTaGCTTCCAGAATGGGACCCA +
Preference number: 4 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHLQGSE*LPEWDP
Trigger: TGGGTCCCATTCTGGAAGTCACTCTGACCCCTGAAG...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp TTCCCAAAGAGGTTATTCTGCCAGGGCCTTGTAAACCAGCACCTACCTACGCCACCACCTTCCACTTCCTaGTCCAGCTTTGTGATCAAC +
Preference number: 4 (lower is better)
Translates to: FPKRLFCQGLVNQHLPTPPPSTS*SSFVIN
Trigger: GTTGATCACAAAGCTGGATCAGGAAGTGGAAGGTGG...TGGCGTAGGTAGGTGCTGGTTTACAAGGCCCTGGCAGAATAACCTCTTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp CACCCCTGCTACTGTTCACTGGTTGAGGACTCACCCCTGCTACTGTTCACTGGTGAGCCTTCTCTGCAATaGCTTGTGATTTGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: HPCYCSLVEDSPLLLFTGEPSLQ*LVICSD
Trigger: ATCTGAGCAAATCACAAGTCATTGCAGAGAAGGCTC...ACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp TTCCCAAAGAGGTTATTCTGCCAGGGCCTTGTAAACCAGCACCTACCTACGCCATCCTGGCCTGGACGATaGATTGTCAGAAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: FPKRLFCQGLVNQHLPTPSWPGR*IVRRVG
Trigger: TCCAACTCTTCTGACAATGCATCGTCCAGGCCAGGA...TGGCGTAGGTAGGTGCTGGTTTACAAGGCCCTGGCAGAATAACCTCTTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GCAGTGACAAGGTGGCCATTGTCCCATCTCAGCTCCCGTGACACGCCTTGTTTTAAGGTAAATCGTATGTaGCAGCGTGTGACCTCTTCA +
Preference number: 4 (lower is better)
Translates to: AVTRWPLSHLSSRDTPCFKVNRM*QRVTSS
Trigger: TGAAGAGGTCACACGCTGCCACATACGATTTACCTT...AAAACAAGGCGTGTCACGGGAGCTGAGATGGGACAATGGCCACCTTGTCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GGGAATCACAGGAAAATGCCTGACAAGAAGGGATTGGCACATCTAGGCACCAATTGTGAGCTTGCCTCGTaGTCCGGTTTGGTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: GNHRKMPDKKGLAHLGTNCELAS*SGLVEW
Trigger: CCACTCAACCAAACCGGACCACGAGGCAAGCTCACA...ATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATAGCTGGAGGGACTCGTaGGTGAGAAAAGCTACAGCC +
Preference number: 4 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHSWRDS*VRKATA
Trigger: GGCTGTAGCTTTTCTCACCCACGAGTCCCTCCAGCT...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GAATGTCAGAATGTGAGCCTGCGGTATCTCCAGAGAAGGCATCCACACCTGAGAGCAAAGTATTCAGGCTaGGGCCTCATGGCCTTAATG +
Preference number: 4 (lower is better)
Translates to: ECQNVSLRYLQRRHPHLRAKYSG*GLMALM
Trigger: CATTAAGGCCATGAGGCCCCAGCCTGAATACTTTGC...TCTCAGGTGTGGATGCCTTCTCTGGAGATACCGCAGGCTCACATTCTGACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp CACCCCTGCTACTGTTCACTGGTTGAGGACTCACCCCTGCTACTGTTCACTGGTGTTCAAGATCTGCTCTaGAACCGGTTTGTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: HPCYCSLVEDSPLLLFTGVQDLL*NRFVLV
Trigger: TACAAGGACAAACCGGTTCCAGAGCAGATCTTGAAC...ACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp TTCAATACCTCAGAGATCTTAGCAAGGGCAATAAAGACTGGTTCTTCTGTCCCCGGCTTTGGGAGTGAGTaGGGGTGGGCTCAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FNTSEILARAIKTGSSVPGFGSE*GWAQGC
Trigger: ACAGCCTTGAGCCCACCCCCACTCACTCCCAAAGCC...GGGGACAGAAGAACCAGTCTTTATTGCCCTTGCTAAGATCTCTGAGGTATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp TCGCAGCTAACAACTGATGGCTTGACTCTGAACCCACCCAAAGAGATCCTTCACCAGGGATGCTTTGAATaGACTTGCAGAAGAGCACGC +
Preference number: 4 (lower is better)
Translates to: SQLTTDGLTLNPPKEILHQGCFE*TCRRAR
Trigger: GCGTGCTCTTCTGCAAGTTCATTCAAAGCATCCCTG...GTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp TTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTAGCACCTCTAGGATGTTaGTTAGAAGCTGTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: FQSPCAFHGCIGCSIMEVAPLGC*LEAVSL
Trigger: CAAGCTCACAGCTTCTAAGCAACATCCTAGAGGTGC...TACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp GGGAGCTTTGAGACCATTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGTTCTCACAGTCTCTGTaGAAATCCCGAAGCTTGTAT +
Preference number: 4 (lower is better)
Translates to: GSFETISEPVCFPWLHWVFSQSL*KSRSLY
Trigger: ATACAAGCTTCGGGATTTGCACAGAGACTGTGAGAA...CACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAATGGTCTCAAAGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATGTCAGCCCATCTGTCTaGAAAGATGGGGAGCTTAGG +
Preference number: 4 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHVSPSV*KDGELR
Trigger: CCTAAGCTCCCCATCTTTGCAGACAGATGGGCTGAC...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GGGAATCACAGGAAAATGCCTGACAAGAAGGGATTGGCACATCTAGGCACCAATGTCCCAGATAGGATCTaGGAACGCCACTCGATCAGA +
Preference number: 4 (lower is better)
Translates to: GNHRKMPDKKGLAHLGTNVPDRI*ERHSIR
Trigger: TCTGATCGAGTGGCGTTCCCAGATCCTATCTGGGAC...ATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GAATGTCAGAATGTGAGCCTGCGGTATCTCCAGAGAAGGCATCCACACCTGAGACTGCAAGTTCATCCTTaGGAAGTGTCCCAGATAGGA +
Preference number: 4 (lower is better)
Translates to: ECQNVSLRYLQRRHPHLRLQVHP*EVSQIG
Trigger: TCCTATCTGGGACACTTCCCAAGGATGAACTTGCAG...TCTCAGGTGTGGATGCCTTCTCTGGAGATACCGCAGGCTCACATTCTGACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp AGGGAGAGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGCTGATGAAGGTGGACTaGTCTGGATCATACAGGGCT +
Preference number: 4 (lower is better)
Translates to: REREPCGSWSVLSIWHFQLMKVD*SGSYRA
Trigger: AGCCCTGTATGATCCAGACCAGTCCACCTTCATCAG...CTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GAATGTCAGAATGTGAGCCTGCGGTATCTCCAGAGAAGGCATCCACACCTGAGACATCACATCAGGTTCTaGAGCCTTCTCTGCAATGAC +
Preference number: 4 (lower is better)
Translates to: ECQNVSLRYLQRRHPHLRHHIRF*SLLCND
Trigger: GTCATTGCAGAGAAGGCTCCAGAACCTGATGTGATG...TCTCAGGTGTGGATGCCTTCTCTGGAGATACCGCAGGCTCACATTCTGACATTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATCGGCTGTCCACCAACTaGAGACTCTTTGGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHRLSTN*RLFGLC
Trigger: ACAAAGGCCAAAGAGTCTCCAGTTGGTGGACAGCCG...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CAA 72 bp AAAGGGAATCACAGGAAAATGCCTGACAAGAAGGGATaGGCACATCTAGGCACCAATAGGCCCAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KGNHRKMPDKKG*AHLGTNRPSSA
Trigger: AGCAGAGCTGGGCCTATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp TTCCCAAAGAGGTTATTCTGCCAGGGCCTTGTAAACCAGCACCTACCTACGCCAACATGTCCCGGATCCTaGAGCCAATTTCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FPKRLFCQGLVNQHLPTPTCPGS*SQFLFS
Trigger: TGAGAAAAGAAATTGGCTTCAGGATCCGGGACATGT...TGGCGTAGGTAGGTGCTGGTTTACAAGGCCCTGGCAGAATAACCTCTTTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp GCAGTGACAAGGTGGCCATTGTCCCATCTCAGCTCCCGTGACACGCCTTGTTTTCATTCTCCAAAGGGCTaGTTTCTTCTACTGAAATCT +
Preference number: 4 (lower is better)
Translates to: AVTRWPLSHLSSRDTPCFHSPKG*FLLLKS
Trigger: AGATTTCAGTAGAAGAAATCAGCCCTTTGGAGAATG...AAAACAAGGCGTGTCACGGGAGCTGAGATGGGACAATGGCCACCTTGTCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp GGGAATCACAGGAAAATGCCTGACAAGAAGGGATTGGCACATCTAGGCACCAATGCAACCCCATACTTCTaGCTCTTGGTAGGGATCCAA +
Preference number: 4 (lower is better)
Translates to: GNHRKMPDKKGLAHLGTNATPYF*LLVGIQ
Trigger: TTGGATCCCTACCAAGAGGCAGAAGTATGGGGTTGC...ATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp GAATGTCAGAATGTGAGCCTGCGGTATCTCCAGAGAAGGCATCCACACCTGAGATGTGAAAAGTTCTTCTaGACCTGTGTGAGGTCACCT +
Preference number: 4 (lower is better)
Translates to: ECQNVSLRYLQRRHPHLRCEKFF*TCVRSP
Trigger: AGGTGACCTCACACAGGTGCAGAAGAACTTTTCACA...TCTCAGGTGTGGATGCCTTCTCTGGAGATACCGCAGGCTCACATTCTGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp TTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTACAGCGTGGTACCATCTaGGTTCATCAGTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: FQSPCAFHGCIGCSIMEVQRGTI*VHQFHK
Trigger: TTTGTGAAACTGATGAACGCAGATGGTACCACGCTG...TACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp AGGGAGAGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGAAGCACTGCAGGTACTaGTTTGGGGATGACTTGATG +
Preference number: 4 (lower is better)
Translates to: REREPCGSWSVLSIWHFQKHCRY*FGDDLM
Trigger: CATCAAGTCATCCCCAAAGCAGTACCTGCAGTGCTT...CTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp TCAAGAGGAAAACCATTTCTTTCGCAGCTAACAACTGATGGCTTGACTCTGAACGTACGTGAGCTGAAGTaGGGCCCACATCCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: SRGKPFLSQLTTDGLTLNVRELK*GPHPSC
Trigger: ACAGGACGGATGTGGGCCCCACTTCAGCTCACGTAC...GTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGAAAGAAATGGTTTTCCTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GGGAGCTTTGAGACCATTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGGAATTTGATTTTGTGTaGCCCCAGGTTATACCACAT +
Preference number: 4 (lower is better)
Translates to: GSFETISEPVCFPWLHWVEFDFV*PQVIPH
Trigger: ATGTGGTATAACCTGGGGCCACACAAAATCAAATTC...CACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAATGGTCTCAAAGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GGGAATCACAGGAAAATGCCTGACAAGAAGGGATTGGCACATCTAGGCACCAATCTTCTCCTGGTGGTGTaGTACTGGTCATCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GNHRKMPDKKGLAHLGTNLLLVV*YWSSSQ
Trigger: CTGAGAAGATGACCAGTACCACACCACCAGGAGAAG...ATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CAA 72 bp AGCACCTACCTACGCCATCACCCAGAGTCCTTTGCGTaGGGGCAGCTGAAAGCTATTATTTTCATGACTATG +
Preference number: 4 (lower is better)
Translates to: STYLRHHPESFA*GQLKAIIFMTM
Trigger: CATAGTCATGAAAATAATAGCTTTCAGCTGCCCCAACGCAAAGGACTCTGGGTGATGGCGTAGGTAGGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp GGGAGCTTTGAGACCATTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGTTGTGCTTAATGTTCTaGGAATTAGAACGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: GSFETISEPVCFPWLHWVLCLMF*ELERQF
Trigger: AAACTGGCGTTCTAATTCTCAGAACATTAAGCACAA...CACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAATGGTCTCAAAGCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp AGGGAGAGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGACTCCTTGCTCAGTTTaGTGGCTTTCTCCCACATTT +
Preference number: 4 (lower is better)
Translates to: REREPCGSWSVLSIWHFQTPCSV*WLSPTF
Trigger: AAATGTGGGAGAAAGCCATCAAACTGAGCAAGGAGT...CTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp TTCAATACCTCAGAGATCTTAGCAAGGGCAATAAAGACTGGTTCTTCTGTCCCCGCTTTGGGGATGACTTaGTGTCTTCTCCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FNTSEILARAIKTGSSVPALGMT*CLLLVV
Trigger: CACCACCAGGAGAAGACATCAAGTCATCCCCAAAGC...GGGGACAGAAGAACCAGTCTTTATTGCCCTTGCTAAGATCTCTGAGGTATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp CTCTTCTTGTCCTGTCTGTATTTAAACGGCATTGAAGTCTTCAACTTTAGTACTGGGCATGCAGCGGCTTaGGCTGCTCCGTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LFLSCLYLNGIEVFNFSTGHAAA*AAPSAS
Trigger: AGAAGCTGACGGAGCAGCTCAAGCCGCTGCATGCCC...AGTACTAAAGTTGAAGACTTCAATGCCGTTTAAATACAGACAGGACAAGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp TTCAATACCTCAGAGATCTTAGCAAGGGCAATAAAGACTGGTTCTTCTGTCCCCTGGGCATCCCGTTACTaGCCCAGCGAATTAGGTAGT +
Preference number: 4 (lower is better)
Translates to: FNTSEILARAIKTGSSVPWASRY*PSELGS
Trigger: ACTACCTAATTCGCTGGGGCAGTAACGGGATGCCCA...GGGGACAGAAGAACCAGTCTTTATTGCCCTTGCTAAGATCTCTGAGGTATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp AACTTGATACAAGCTAATCATAACAATAGAAGCCCTAAGACACCTTCCCAAAGATCCCAGGCGTGCTGCTaGACGCAGTTGCTGACCCTC +
Preference number: 4 (lower is better)
Translates to: NLIQANHNNRSPKTPSQRSQACC*TQLLTL
Trigger: GAGGGTCAGCAACTGCGTGCAGCAGCACGCCTGGGA...TCTTTGGGAAGGTGTCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GGGAGCTTTGAGACCATTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGGCTCTGATTTATCTCTaGATTCTTGAGATGATCTGT +
Preference number: 4 (lower is better)
Translates to: GSFETISEPVCFPWLHWVALIYL*ILEMIC
Trigger: ACAGATCATCTCAAGAATCCAGAGATAAATCAGAGC...CACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAATGGTCTCAAAGCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATAGTTCAAAGCTTGCCTaGTCCATGAAGCTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHSSKLA*SMKLLV
Trigger: CACCAAGAGCTTCATGGACCAGGCAAGCTTTGAACT...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp TCAAGAGGAAAACCATTTCTTTCGCAGCTAACAACTGATGGCTTGACTCTGAACAGCTCCACCTTCTCCTaGTCCTCGGGATGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: SRGKPFLSQLTTDGLTLNSSTFS*SSGCSC
Trigger: ACAAGAGCATCCCGAGGACCAGGAGAAGGTGGAGCT...GTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGAAAGAAATGGTTTTCCTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATACTGTCTTCTTTGGGTaGCAGATCTTCAACTCTGGC +
Preference number: 4 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHTVFFG*QIFNSG
Trigger: GCCAGAGTTGAAGATCTGCCACCCAAAGAAGACAGT...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp GAGAAATGTGGATTCCAGTTCCTAGAGCAAAAGCCTTTGGACAGAAATCTCACTGCTTTGTGGAGCAGATaGGAGTGGCGATCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: EKCGFQFLEQKPLDRNLTALWSR*EWRSES
Trigger: GCTTTCAGATCGCCACTCTCATCTGCTCCACAAAGC...AGTGAGATTTCTGTCCAAAGGCTTTTGCTCTAGGAACTGGAATCCACATTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATTTGTCAGGGATGCTTTaGATGAACTTGCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHLSGML*MNLQKS
Trigger: GCTCTTCTGCAAGTTCATTCAAAGCATCCCTGACAA...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp AGGGAGAGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGCTGATTTCTTCTACTaGAATCTCCTTGGCTTCGAA +
Preference number: 4 (lower is better)
Translates to: REREPCGSWSVLSIWHFQADFFY*NLLGFE
Trigger: TTCGAAGCCAAGGAGATTTCAGTAGAAGAAATCAGC...CTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp CTCTTCTTGTCCTGTCTGTATTTAAACGGCATTGAAGTCTTCAACTTTAGTACTGCTGCACGCAGTTGCTaGCCCTCTCGTTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LFLSCLYLNGIEVFNFSTAARSC*PSRWSA
Trigger: AGCTGACCAACGAGAGGGTCAGCAACTGCGTGCAGC...AGTACTAAAGTTGAAGACTTCAATGCCGTTTAAATACAGACAGGACAAGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp AACTTGATACAAGCTAATCATAACAATAGAAGCCCTAAGACACCTTCCCAAAGACCTCCTTCAGCTCCATaGGGCCCACCCGGACAATCT +
Preference number: 4 (lower is better)
Translates to: NLIQANHNNRSPKTPSQRPPSAP*GPPGQS
Trigger: AGATTGTCCGGGTGGGCCGCATGGAGCTGAAGGAGG...TCTTTGGGAAGGTGTCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp AGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTAAAGAGACTTTCTCTAAAAGGTTaGCTTCCTCATCAAACACAG +
Preference number: 4 (lower is better)
Translates to: SPCAFHGCIGCSIMEVKRLSLKG*LPHQTQ
Trigger: CTGTGTTTGATGAGGAAGGCAACCTTTTAGAGAAAG...TCTCTTTACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp GGGAATCACAGGAAAATGCCTGACAAGAAGGGATTGGCACATCTAGGCACCAATTCCTGGTCCTCGGGATaGTCTTGTAAGTACTTTTCT +
Preference number: 4 (lower is better)
Translates to: GNHRKMPDKKGLAHLGTNSWSSG*SCKYFS
Trigger: AGAAAAGTACTTACAAGAGCATCCCGAGGACCAGGA...ATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GGGAATCACAGGAAAATGCCTGACAAGAAGGGATTGGCACATCTAGGCACCAATTGGCAGGATTATTTCTaGAAAGCCCATTTTCCGTGC +
Preference number: 4 (lower is better)
Translates to: GNHRKMPDKKGLAHLGTNWQDYF*KAHFPC
Trigger: GCACGGAAAATGGGCTTTCCAGAAATAATCCTGCCA...ATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp AGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTAAAGAGAATTTCGAACATCCCCTaGCAGGATTATTTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SPCAFHGCIGCSIMEVKRISNIP*QDYFWK
Trigger: TTTCCAGAAATAATCCTGCCAGGGGATGTTCGAAAT...TCTCTTTACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GGGAATCACAGGAAAATGCCTGACAAGAAGGGATTGGCACATCTAGGCACCAATGGGTTTTTGGACGCTTaGAGTTCTTTTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GNHRKMPDKKGLAHLGTNGFLDA*SSFSSS
Trigger: GCTGGAAGAAAAAGAACTCCAAGCGTCCAAAAACCC...ATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp TCGCAGCTAACAACTGATGGCTTGACTCTGAACCCACCCAAAGAGATCCTTCACAGACGGATGGGTTTTTaGACGCTTGGAGTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SQLTTDGLTLNPPKEILHRRMGF*TLGVLF
Trigger: AAAAAGAACTCCAAGCGTCCAAAAACCCATCCGTCT...GTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CAA 72 bp GGGCTAGGCAGTCAAGACCTTGTTAGAGATGTTATCTaGGGGTATGTCATATGTGAGCAAGCTGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: GLGSQDLVRDVI*GYVICEQAGLV
Trigger: AACAAGCCCAGCTTGCTCACATATGACATACCCCAAGATAACATCTCTAACAAGGTCTTGACTGCCTAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp CTCTTCTTGTCCTGTCTGTATTTAAACGGCATTGAAGTCTTCAACTTTAGTACTCTCGTAGCGTGTTTGTaGGCTCCTGAACCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LFLSCLYLNGIEVFNFSTLVACL*APEPGA
Trigger: TGCCCCTGGTTCAGGAGCTCACAAACACGCTACGAG...AGTACTAAAGTTGAAGACTTCAATGCCGTTTAAATACAGACAGGACAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp GGGAATCACAGGAAAATGCCTGACAAGAAGGGATTGGCACATCTAGGCACCAATTCTGGATTCTTGAGATaGTCTGTGTCGGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: GNHRKMPDKKGLAHLGTNSGFLR*SVSEGK
Trigger: TTTACCTTCCGACACAGATCATCTCAAGAATCCAGA...ATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATAGGAAAACTCTGTTCTaGGTCATGTTCATGACCATC +
Preference number: 4 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHRKTLF*VMFMTI
Trigger: GATGGTCATGAACATGACCCAGAACAGAGTTTTCCT...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CAA 72 bp GGAAAACCATTTCTTTCGCAGCTAACAACTGATGGCTaGACTCTGAACCCACCCAAAGAGATCCTTCACGTT +
Preference number: 4 (lower is better)
Translates to: GKPFLSQLTTDG*TLNPPKEILHV
Trigger: AACGTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGAAAGAAATGGTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp GGGAATCACAGGAAAATGCCTGACAAGAAGGGATTGGCACATCTAGGCACCAATCATTTCCACTCAAATTaGACTCGCACTGCATCATAT +
Preference number: 4 (lower is better)
Translates to: GNHRKMPDKKGLAHLGTNHFHSN*TRTASY
Trigger: ATATGATGCAGTGCGAGTTCAATTTGAGTGGAAATG...ATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp AACTTGATACAAGCTAATCATAACAATAGAAGCCCTAAGACACCTTCCCAAAGAACGGTGTCGCCGATCTaGAAGGAGAGCTCCACATCT +
Preference number: 4 (lower is better)
Translates to: NLIQANHNNRSPKTPSQRTVSPI*KESSTS
Trigger: AGATGTGGAGCTCTCCTTGCAGATCGGCGACACCGT...TCTTTGGGAAGGTGTCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATAAAGCAAGAAACAGCTaGCGGATTGAGTCGTTAAAT +
Preference number: 4 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHKARNS*RIESLN
Trigger: ATTTAACGACTCAATCCGCCAGCTGTTTCTTGCTTT...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp GGGAATCACAGGAAAATGCCTGACAAGAAGGGATTGGCACATCTAGGCACCAATCAATTTTGTTGCGCTTaGCTTCTGAGAAGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: GNHRKMPDKKGLAHLGTNQFCCA*LLRRFQ
Trigger: TTGAAACCTTCTCAGAAGCCAAGCGCAACAAAATTG...ATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp AATATCACGGAGTCACAAGCCATCAATCAATATTCATTCATAAAGACTGTGACAGTCAGCTTCTCCCCGTaGATGCGGATCCCTTCCGTA +
Preference number: 4 (lower is better)
Translates to: NITESQAINQYSFIKTVTVSFSP*MRIPSV
Trigger: TACGGAAGGGATCCGCATCCACGGGGAGAAGCTGAC...TGTCACAGTCTTTATGAATGAATATTGATTGATGGCTTGTGACTCCGTGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CAA 72 bp CTTAGCAAAGACGTGAAGAGGCGGGTATGCAAATGCTaGAATCCTCCTGTTCACTTGAACTTGGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LSKDVKRRVCKC*NPPVHLNLEEK
Trigger: CTTTTCTTCCAAGTTCAAGTGAACAGGAGGATTCAAGCATTTGCATACCCGCCTCTTCACGTCTTTGCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CAA 72 bp AGGGCAATAAAGACTGGTTCTTCTGTCCCCCTCTTCTaGTCCTGTCTGTATTTAAACGGCATTGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: RAIKTGSSVPLF*SCLYLNGIEVF
Trigger: GAAGACTTCAATGCCGTTTAAATACAGACAGGACAAGAAGAGGGGGACAGAAGAACCAGTCTTTATTGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp AATATCACGGAGTCACAAGCCATCAATCAATATTCATTCATAAAGACTGTGACAATGGCCGGGAATAGCTaGACTGCTGCACTTCGTTGG +
Preference number: 4 (lower is better)
Translates to: NITESQAINQYSFIKTVTMAGNS*TAALRW
Trigger: CCAACGAAGTGCAGCAGTTCAGCTATTCCCGGCCAT...TGTCACAGTCTTTATGAATGAATATTGATTGATGGCTTGTGACTCCGTGATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp AATATCACGGAGTCACAAGCCATCAATCAATATTCATTCATAAAGACTGTGACAAGCATGGAGAGCGGGTaGACAGAGAGAGAATGGTCC +
Preference number: 4 (lower is better)
Translates to: NITESQAINQYSFIKTVTSMESG*TEREWS
Trigger: GGACCATTCTCTCTCTGTGCACCCGCTCTCCATGCT...TGTCACAGTCTTTATGAATGAATATTGATTGATGGCTTGTGACTCCGTGATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp AACTTGATACAAGCTAATCATAACAATAGAAGCCCTAAGACACCTTCCCAAAGATCCCATCCTGCAGCGTaGTACCATCTGCGTTCATCA +
Preference number: 4 (lower is better)
Translates to: NLIQANHNNRSPKTPSQRSHPAA*YHLRSS
Trigger: TGATGAACGCAGATGGTACCACGCTGCAGGATGGGA...TCTTTGGGAAGGTGTCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CAA 72 bp CTTGACTCTGAACCCACCCAAAGAGATCCTTCACGTTaGCCAATTTTCATTCCTTTAGCTGGACCAAGAATA +
Preference number: 4 (lower is better)
Translates to: LDSEPTQRDPSR*PIFIPLAGPRI
Trigger: TATTCTTGGTCCAGCTAAAGGAATGAAAATTGGCAAACGTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp GAGAAATGTGGATTCCAGTTCCTAGAGCAAAAGCCTTTGGACAGAAATCTCACTCCCCATGGATCAGGGTaGCATAAATATCATTTCGAA +
Preference number: 4 (lower is better)
Translates to: EKCGFQFLEQKPLDRNLTPHGSG*HKYHFE
Trigger: TTCGAAATGATATTTATGTCACCCTGATCCATGGGG...AGTGAGATTTCTGTCCAAAGGCTTTTGCTCTAGGAACTGGAATCCACATTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp AATATCACGGAGTCACAAGCCATCAATCAATATTCATTCATAAAGACTGTGACATCAGCAACCTCAAGCTaGAGTCTTCCCGCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: NITESQAINQYSFIKTVTSATSS*SLPASH
Trigger: ATGAGAGGCGGGAAGACTTCAGCTTGAGGTTGCTGA...TGTCACAGTCTTTATGAATGAATATTGATTGATGGCTTGTGACTCCGTGATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp TCAAGAGGAAAACCATTTCTTTCGCAGCTAACAACTGATGGCTTGACTCTGAACAAAAGTTCAGTACCTTaGAGAGTTTCACGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SRGKPFLSQLTTDGLTLNKSSVP*RVSRVP
Trigger: TGGCACACGTGAAACTCTCCAAGGTACTGAACTTTT...GTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGAAAGAAATGGTTTTCCTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp TTCAATACCTCAGAGATCTTAGCAAGGGCAATAAAGACTGGTTCTTCTGTCCCCTCATTCTCAAACATGTaGAAGTTGCCATTTCCACTC +
Preference number: 4 (lower is better)
Translates to: FNTSEILARAIKTGSSVPSFSNM*KLPFPL
Trigger: GAGTGGAAATGGCAACTTCCACATGTTTGAGAATGA...GGGGACAGAAGAACCAGTCTTTATTGCCCTTGCTAAGATCTCTGAGGTATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CAA 72 bp GGGCATATCCAAGTCATAGCCAGAAAGCTTTCAGTTTaGCCAATAACACTCAAGTCTGTTAGAACTATCTGG +
Preference number: 4 (lower is better)
Translates to: GHIQVIARKLSV*PITLKSVRTIW
Trigger: CCAGATAGTTCTAACAGACTTGAGTGTTATTGGCAAAACTGAAAGCTTTCTGGCTATGACTTGGATATGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR TCA 90 bp AACTTGATACAAGCTAATCATAACAATAGAAGCCCTAAGACACCTTCCCAAAGAAGAACCTCAGCAAACTaGTTGATGGCACGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: NLIQANHNNRSPKTPSQRRTSAN*LMARRK
Trigger: TTTCCTCCGTGCCATCAATCAGTTTGCTGAGGTTCT...TCTTTGGGAAGGTGTCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR GCA 90 bp CTCTTCTTGTCCTGTCTGTATTTAAACGGCATTGAAGTCTTCAACTTTAGTACTCCAGGTTCTGCAAAATaGTCTTCTCCTCTTGGATCT +
Preference number: 4 (lower is better)
Translates to: LFLSCLYLNGIEVFNFSTPGSAK*SSPLGS
Trigger: AGATCCAAGAGGAGAAGAGCATTTTGCAGAACCTGG...AGTACTAAAGTTGAAGACTTCAATGCCGTTTAAATACAGACAGGACAAGAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp CTCTTCTTGTCCTGTCTGTATTTAAACGGCATTGAAGTCTTCAACTTTAGTACTTCTCACTGTCTTCTTTaGGTGGCAGATCTTCAACTC +
Preference number: 4 (lower is better)
Translates to: LFLSCLYLNGIEVFNFSTSHCLL*VADLQL
Trigger: GAGTTGAAGATCTGCCACCCAAAGAAGACAGTGAGA...AGTACTAAAGTTGAAGACTTCAATGCCGTTTAAATACAGACAGGACAAGAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
3UTR CAA 72 bp ATCCATAGCTTCAGGCCAGGTAGTTTTTATGACAACTaGATACAAGCTAATCATAACAATAGAAGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: IHSFRPGSFYDN*IQANHNNRSPK
Trigger: CTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTTGTCATAAAAACTACCTGGCCTGAAGCTATGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp AACTTGATACAAGCTAATCATAACAATAGAAGCCCTAAGACACCTTCCCAAAGAGTTGCCTCTTTCAAATaGATGTATGTCTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: NLIQANHNNRSPKTPSQRVASFK*MYVSGK
Trigger: TTTTCCTGAGACATACATCCATTTGAAAGAGGCAAC...TCTTTGGGAAGGTGTCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CCA 90 bp AATATCACGGAGTCACAAGCCATCAATCAATATTCATTCATAAAGACTGTGACATTCTTTCAATCCACATaGTGGCAAACTCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: NITESQAINQYSFIKTVTFFQST*WQTHFL
Trigger: CAGAAAATGAGTTTGCCACCATGTGGATTGAAAGAA...TGTCACAGTCTTTATGAATGAATATTGATTGATGGCTTGTGACTCCGTGATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp CCCTGCTCCACAGGCCGCCCTTCCTGGGCGCCATTCTCAGGCAGCAGTGGTCCACCATACTTCTGCCTCTaGGTAGGGATCCAACGGGCC +
Preference number: 5 (lower is better)
Translates to: PCSTGRPSWAPFSGSSGPPYFCL*VGIQRA
Trigger: GGCCCGTTGGATCCCTACCAAGAGGCAGAAGTATGG...TGGACCACTGCTGCCTGAGAATGGCGCCCAGGAAGGGCGGCCTGTGGAGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 90 bp CTCGTGGCTTTGGGAGTGAGTGGGGGTGGGCTCAAGGCTGTAGACTaGAGAGGCGAGGGACTGTGGAATGGTGTCAGCCGGCTGTCCACC +
Preference number: 5 (lower is better)
Translates to: LVALGVSGGGLKAVD*RGEGLWNGVSRLST
Trigger: GGTGGACAGCCGGCTGACACCATTCCACAGTCCCTCGCCTCTGCAGTCTACAGCCTTGAGCCCACCCCCACTCACTCCCAAAGCCACGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 90 bp CTCCATGCGGCCCACCCGGACAATCTGGCACACGAGGCTGATGCGTaGCCGGATGAGGTCTGTGCTGCTGAGGTCGGTGAACACTGCTTG +
Preference number: 5 (lower is better)
Translates to: LHAAHPDNLAHEADA*PDEVCAAEVGEHCL
Trigger: CAAGCAGTGTTCACCGACCTCAGCAGCACAGACCTCATCCGGCCACGCATCAGCCTCGTGTGCCAGATTGTCCGGGTGGGCCGCATGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 90 bp TCGTGGTCCGGTTTGGTTGAGTGGTCGTCCAGCTGGCCACTGAGCTaGTCTGTCAGTAGCGGCAGCAGCACTTCCCTGCACTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: SWSGLVEWSSSWPLS*SVSSGSSTSLHSAC
Trigger: GCAGGCAGAGTGCAGGGAAGTGCTGCTGCCGCTACTGACAGACCAGCTCAGTGGCCAGCTGGACGACCACTCAACCAAACCGGACCACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 90 bp TTGCCTCGTGGTCCGGTTTGGTTGAGTGGTCGTCCAGCTGGCCACTaGGCTGGTCTGTCAGTAGCGGCAGCAGCACTTCCCTGCACTCTG +
Preference number: 5 (lower is better)
Translates to: LPRGPVWLSGRPAGH*AGLSVAAAALPCTL
Trigger: CAGAGTGCAGGGAAGTGCTGCTGCCGCTACTGACAGACCAGCTCAGTGGCCAGCTGGACGACCACTCAACCAAACCGGACCACGAGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 90 bp AGTTCACGGAAGCACGAAGATAGCCGGGCATGCAGCGGCTTGAGCTaGTCCGTCAGCTTCTCCCCGTGGATGCGGATCCCTTCCGTAAGC +
Preference number: 5 (lower is better)
Translates to: SSRKHEDSRACSGLS*SVSFSPWMRIPSVS
Trigger: GCTTACGGAAGGGATCCGCATCCACGGGGAGAAGCTGACGGAGCAGCTCAAGCCGCTGCATGCCCGGCTATCTTCGTGCTTCCGTGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 90 bp CCTGCGCAGCGTGGAGGACAGGATGTAGGGCAGTACCATCGAGCCTaGACGGCTTGGCTTCCTCTCTGTCATGCTGGGTGGCAGCGTTAT +
Preference number: 5 (lower is better)
Translates to: PAQRGGQDVGQYHRA*TAWLPLCHAGWQRY
Trigger: ATAACGCTGCCACCCAGCATGACAGAGAGGAAGCCAAGCCGTGCAGGCTCGATGGTACTGCCCTACATCCTGTCCTCCACGCTGCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 90 bp AGTGGGGGTGGGCTCAAGGCTGTAGACTGCAGAGGCGAGGGACTGTaGAATGGTGTCAGCCGGCTGTCCACCAACTGGAGACTCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SGGGLKAVDCRGEGL*NGVSRLSTNWRLFG
Trigger: GCCAAAGAGTCTCCAGTTGGTGGACAGCCGGCTGACACCATTCCACAGTCCCTCGCCTCTGCAGTCTACAGCCTTGAGCCCACCCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp GGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGCCACCATGGGGCACACAGGGCTaGTCCGACCACTGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: GRGICRPNKLVVEPSMPPWGTQG*SDHCRS
Trigger: GCTTCTGCAGTGGTCGGACAAGCCCTGTGTGCCCCA...TGGTGGCATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 90 bp TTGCGCCAGATGACGGCCCATTCTCGTAGCGTGTTTGTGAGCTCCTaGACCAGGGGCAACTCCCCGGGAATCACGGTCTCATGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: LRQMTAHSRSVFVSS*TRGNSPGITVSCCP
Trigger: AGGGCAGCATGAGACCGTGATTCCCGGGGAGTTGCCCCTGGTTCAGGAGCTCACAAACACGCTACGAGAATGGGCCGTCATCTGGCGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 90 bp GGGTGGGCTCAAGGCTGTAGACTGCAGAGGCGAGGGACTGTGGAATaGTGTCAGCCGGCTGTCCACCAACTGGAGACTCTTTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GWAQGCRLQRRGTVE*CQPAVHQLETLWPL
Trigger: CAAAGGCCAAAGAGTCTCCAGTTGGTGGACAGCCGGCTGACACCATTCCACAGTCCCTCGCCTCTGCAGTCTACAGCCTTGAGCCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 90 bp ATGGAGAGCGGGTGCACAGAGAGAGAATGGTCCCAGGCGTGCTGCTaGACGCAGTTGCTGACCCTCTCGTTGGTCAGCTCCATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: MESGCTEREWSQACC*TQLLTLSLVSSMVS
Trigger: AGAAACCATGGAGCTGACCAACGAGAGGGTCAGCAACTGCGTGCAGCAGCACGCCTGGGACCATTCTCTCTCTGTGCACCCGCTCTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 90 bp TCTACTTTCTCCTTGAGTTCACGGAAGCACGAAGATAGCCGGGCATaGAGCGGCTTGAGCTGCTCCGTCAGCTTCTCCCCGTGGATGCGG +
Preference number: 5 (lower is better)
Translates to: STFSLSSRKHEDSRA*SGLSCSVSFSPWMR
Trigger: CCGCATCCACGGGGAGAAGCTGACGGAGCAGCTCAAGCCGCTGCATGCCCGGCTATCTTCGTGCTTCCGTGAACTCAAGGAGAAAGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 90 bp AGCCGGGCATGCAGCGGCTTGAGCTGCTCCGTCAGCTTCTCCCCGTaGATGCGGATCCCTTCCGTAAGCAGAGGTATTTGTAAGGCAATC +
Preference number: 5 (lower is better)
Translates to: SRACSGLSCSVSFSP*MRIPSVSRGICKAI
Trigger: GATTGCCTTACAAATACCTCTGCTTACGGAAGGGATCCGCATCCACGGGGAGAAGCTGACGGAGCAGCTCAAGCCGCTGCATGCCCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp CCCTGCTCCACAGGCCGCCCTTCCTGGGCGCCATTCTCAGGCAGCAGTGGTCCAAACTCCTTGCTCAGTTaGATGGCTTTCTCCCACATT +
Preference number: 5 (lower is better)
Translates to: PCSTGRPSWAPFSGSSGPNSLLS*MAFSHI
Trigger: AATGTGGGAGAAAGCCATCAAACTGAGCAAGGAGTT...TGGACCACTGCTGCCTGAGAATGGCGCCCAGGAAGGGCGGCCTGTGGAGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 90 bp GTCCGGTTGATCCTTCTCAGCAGCCTCTCCATGATCAGCTGTACGTaGGCTGAAGTGGGGCCCACATCCGTCCTGTCTAGCACCTCTAGG +
Preference number: 5 (lower is better)
Translates to: VRLILLSSLSMISCT*AEVGPTSVLSSTSR
Trigger: CCTAGAGGTGCTAGACAGGACGGATGTGGGCCCCACTTCAGCTCACGTACAGCTGATCATGGAGAGGCTGCTGAGAAGGATCAACCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 90 bp AAACAGGGGTTCCAGGATGGACCCATCCGATCCTGGCCTGGACGATaGATTGTCAGAAGAGTTGGAGGAGGTGGAGATCACCGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: KQGFQDGPIRSWPGR*IVRRVGGGGDHRGG
Trigger: GCCTCCTCGGTGATCTCCACCTCCTCCAACTCTTCTGACAATGCATCGTCCAGGCCAGGATCGGATGGGTCCATCCTGGAACCCCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 90 bp CGTGGAGGACAGGATGTAGGGCAGTACCATCGAGCCTGCACGGCTTaGCTTCCTCTCTGTCATGCTGGGTGGCAGCGTTATGACTCCATA +
Preference number: 5 (lower is better)
Translates to: RGGQDVGQYHRACTA*LPLCHAGWQRYDSI
Trigger: TATGGAGTCATAACGCTGCCACCCAGCATGACAGAGAGGAAGCCAAGCCGTGCAGGCTCGATGGTACTGCCCTACATCCTGTCCTCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 90 bp CTTCTTTGGGTGGCAGATCTTCAACTCTGGCACCCGATGAAGCTCTaGGTTCAAACAGGGGTTCCAGGATGGACCCATCCGATCCTGGCC +
Preference number: 5 (lower is better)
Translates to: LLWVADLQLWHPMKL*VQTGVPGWTHPILA
Trigger: GGCCAGGATCGGATGGGTCCATCCTGGAACCCCTGTTTGAACGCAGAGCTTCATCGGGTGCCAGAGTTGAAGATCTGCCACCCAAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 90 bp TCTAGCACCTCTAGGATGTTGCTTAGAAGCTGTGAGCTTGCCTCGTaGTCCGGTTTGGTTGAGTGGTCGTCCAGCTGGCCACTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SSTSRMLLRSCELAS*SGLVEWSSSWPLSW
Trigger: CCAGCTCAGTGGCCAGCTGGACGACCACTCAACCAAACCGGACCACGAGGCAAGCTCACAGCTTCTAAGCAACATCCTAGAGGTGCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 90 bp TGCGTTCAAACAGGGGTTCCAGGATGGACCCATCCGATCCTGGCCTaGACGATGCATTGTCAGAAGAGTTGGAGGAGGTGGAGATCACCG +
Preference number: 5 (lower is better)
Translates to: CVQTGVPGWTHPILA*TMHCQKSWRRWRSP
Trigger: CGGTGATCTCCACCTCCTCCAACTCTTCTGACAATGCATCGTCCAGGCCAGGATCGGATGGGTCCATCCTGGAACCCCTGTTTGAACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 90 bp CTCTGGCACCCGATGAAGCTCTGCGTTCAAACAGGGGTTCCAGGATaGACCCATCCGATCCTGGCCTGGACGATGCATTGTCAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: LWHPMKLCVQTGVPG*THPILAWTMHCQKS
Trigger: ACTCTTCTGACAATGCATCGTCCAGGCCAGGATCGGATGGGTCCATCCTGGAACCCCTGTTTGAACGCAGAGCTTCATCGGGTGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp GGGAGCTTTGAGACCATTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGGCTGCCCCCTTGATCTaGACAGCTTCTTCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: GSFETISEPVCFPWLHWVAAPLI*TASSRG
Trigger: GCCTCTGGAAGAAGCTGTCAAGATCAAGGGGGCAGC...CACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAATGGTCTCAAAGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp TCGCAGCTAACAACTGATGGCTTGACTCTGAACCCACCCAAAGAGATCCTTCACGGTGGAGGTGGGGCTTaGGAGTCTCTCCGGACAGGC +
Preference number: 5 (lower is better)
Translates to: SQLTTDGLTLNPPKEILHGGGGA*ESLRTG
Trigger: GCCTGTCCGGAGAGACTCCAAAGCCCCACCTCCACC...GTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 90 bp CTGAAGTGGGGCCCACATCCGTCCTGTCTAGCACCTCTAGGATGTTaGTTAGAAGCTGTGAGCTTGCCTCGTGGTCCGGTTTGGTTGAGT +
Preference number: 5 (lower is better)
Translates to: LKWGPHPSCLAPLGC*LEAVSLPRGPVWLS
Trigger: ACTCAACCAAACCGGACCACGAGGCAAGCTCACAGCTTCTAAGCAACATCCTAGAGGTGCTAGACAGGACGGATGTGGGCCCCACTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 90 bp TATCACCCTTGTACACCACCAGGTCGTGCCTCCCATCCTGCAGCGTaGTACCATCTGCGTTCATCAGTTTCACAAAGGCCACCCCAAAGG +
Preference number: 5 (lower is better)
Translates to: YHPCTPPGRASHPAA*YHLRSSVSQRPPQR
Trigger: CCTTTGGGGTGGCCTTTGTGAAACTGATGAACGCAGATGGTACCACGCTGCAGGATGGGAGGCACGACCTGGTGGTGTACAAGGGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 90 bp AGCTCTGCGTTCAAACAGGGGTTCCAGGATGGACCCATCCGATCCTaGCCTGGACGATGCATTGTCAGAAGAGTTGGAGGAGGTGGAGAT +
Preference number: 5 (lower is better)
Translates to: SSAFKQGFQDGPIRS*PGRCIVRRVGGGGD
Trigger: ATCTCCACCTCCTCCAACTCTTCTGACAATGCATCGTCCAGGCCAGGATCGGATGGGTCCATCCTGGAACCCCTGTTTGAACGCAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp GCAGTGACAAGGTGGCCATTGTCCCATCTCAGCTCCCGTGACACGCCTTGTTTTTCTTCCAGCTCTGCTTaGGTCCCAGGCAGAGTCAGA +
Preference number: 5 (lower is better)
Translates to: AVTRWPLSHLSSRDTPCFSSSSA*VPGRVR
Trigger: TCTGACTCTGCCTGGGACCAAAGCAGAGCTGGAAGA...AAAACAAGGCGTGTCACGGGAGCTGAGATGGGACAATGGCCACCTTGTCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp GAATGTCAGAATGTGAGCCTGCGGTATCTCCAGAGAAGGCATCCACACCTGAGATGCTGCTGCACGCAGTaGCTGACCCTCTCGTTGGTC +
Preference number: 5 (lower is better)
Translates to: ECQNVSLRYLQRRHPHLRCCCTQ*LTLSLV
Trigger: GACCAACGAGAGGGTCAGCAACTGCGTGCAGCAGCA...TCTCAGGTGTGGATGCCTTCTCTGGAGATACCGCAGGCTCACATTCTGACATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATCGGGCATGCAGCGGCTaGAGCTGCTCCGTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHRACSG*SCSVSF
Trigger: GAAGCTGACGGAGCAGCTCAAGCCGCTGCATGCCCG...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 90 bp GACCGTCTCGTACCAACAGGGTTGCTTGACCTGGTAATACACCACTaGCTTGTACTCCGAGACGCCTTCGTACCCAGCACCGGGATGAAT +
Preference number: 5 (lower is better)
Translates to: DRLVPTGLLDLVIHH*LVLRDAFVPSTGMN
Trigger: ATTCATCCCGGTGCTGGGTACGAAGGCGTCTCGGAGTACAAGTCAGTGGTGTATTACCAGGTCAAGCAACCCTGTTGGTACGAGACGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 90 bp CTCACTGTCTTCTTTGGGTGGCAGATCTTCAACTCTGGCACCCGATaGAGCTCTGCGTTCAAACAGGGGTTCCAGGATGGACCCATCCGA +
Preference number: 5 (lower is better)
Translates to: LTVFFGWQIFNSGTR*SSAFKQGFQDGPIR
Trigger: TCGGATGGGTCCATCCTGGAACCCCTGTTTGAACGCAGAGCTTCATCGGGTGCCAGAGTTGAAGATCTGCCACCCAAAGAAGACAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp GGGAGCTTTGAGACCATTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGTTCAAGGCTGCCCCCTaGATCTTGACAGCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: GSFETISEPVCFPWLHWVFKAAP*ILTASS
Trigger: GGAAGAAGCTGTCAAGATCAAGGGGGCAGCCTTGAA...CACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAATGGTCTCAAAGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp AGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTAAAGAGACCAATCACGGTCCGGTaGATCCTTCTCAGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: SPCAFHGCIGCSIMEVKRPITVR*ILLSSL
Trigger: GAGGCTGCTGAGAAGGATCAACCGGACCGTGATTGG...TCTCTTTACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 90 bp AGTGGCTGTAGTGGCTGTCCTCCATTTGTCGTAAGACGGCAATCATaGAAGCCACAAAGCTGCCAATGTGAGGAGACTGTCGGCTCATCC +
Preference number: 5 (lower is better)
Translates to: SGCSGCPPFVVRRQS*KPQSCQCEETVGSS
Trigger: GGATGAGCCGACAGTCTCCTCACATTGGCAGCTTTGTGGCTTGCATGATTGCCGTCTTACGACAAATGGAGGACAGCCACTACAGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp AGGGAGAGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGAGCTTCTCGATCTCCTaGGGCATCCCGTTACTGCCC +
Preference number: 5 (lower is better)
Translates to: REREPCGSWSVLSIWHFQSFSIS*GIPLLP
Trigger: GGGCAGTAACGGGATGCCCAAGGAGATCGAGAAGCT...CTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp TTCCCAAAGAGGTTATTCTGCCAGGGCCTTGTAAACCAGCACCTACCTACGCCATTAGAAGCTGTGAGCTaGCCTCGTGGTCCGGTTTGG +
Preference number: 5 (lower is better)
Translates to: FPKRLFCQGLVNQHLPTPLEAVS*PRGPVW
Trigger: CCAAACCGGACCACGAGGCAAGCTCACAGCTTCTAA...TGGCGTAGGTAGGTGCTGGTTTACAAGGCCCTGGCAGAATAACCTCTTTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp GGCAGGGGCATCTGCAGGCCTAACAAGTTAGTGGTTGAGCCCAGCATGCCACCATTCTCTACTTTCTCCTaGAGTTCACGGAAGCACGAA +
Preference number: 5 (lower is better)
Translates to: GRGICRPNKLVVEPSMPPFSTFS*SSRKHE
Trigger: TTCGTGCTTCCGTGAACTCAAGGAGAAAGTAGAGAA...TGGTGGCATGCTGGGCTCAACCACTAACTTGTTAGGCCTGCAGATGCCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 90 bp GTGGACGGTGTCGCCGATCTGCAAGGAGAGCTCCACATCTTGAGATaGATTGTAGTTGTAGATGGCAACCCCATACTTCTGCCTCTTGGT +
Preference number: 5 (lower is better)
Translates to: VDGVADLQGELHILR*IVVVDGNPILLPLG
Trigger: ACCAAGAGGCAGAAGTATGGGGTTGCCATCTACAACTACAATGCATCTCAAGATGTGGAGCTCTCCTTGCAGATCGGCGACACCGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 90 bp TTCTTATTATCACCCTTGTACACCACCAGGTCGTGCCTCCCATCCTaGAGCGTGGTACCATCTGCGTTCATCAGTTTCACAAAGGCCACC +
Preference number: 5 (lower is better)
Translates to: FLLSPLYTTRSCLPS*SVVPSAFISFTKAT
Trigger: GGTGGCCTTTGTGAAACTGATGAACGCAGATGGTACCACGCTGCAGGATGGGAGGCACGACCTGGTGGTGTACAAGGGTGATAATAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 90 bp GTGCTGTCTTTGCTGGGTGTGAAGACGGATGGGTTTTTGGACGCTTaGAGTTCTTTTTCTTCCAGCTCTGCTTTGGTCCCAGGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: VLSLLGVKTDGFLDA*SSFSSSSALVPGRV
Trigger: GACTCTGCCTGGGACCAAAGCAGAGCTGGAAGAAAAAGAACTCCAAGCGTCCAAAAACCCATCCGTCTTCACACCCAGCAAAGACAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp CACCCCTGCTACTGTTCACTGGTTGAGGACTCACCCCTGCTACTGTTCACTGGTCTCCATCTTCCACGGTaGCCTCTTTCAAATGGATGT +
Preference number: 5 (lower is better)
Translates to: HPCYCSLVEDSPLLLFTGLHLPR*PLSNGC
Trigger: ACATCCATTTGAAAGAGGCAACCGTGGAAGATGGAG...ACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp AGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTAAAGAGACAGAAGAACCTTGTATaGTTCGTCTCCTCGGCCACC +
Preference number: 5 (lower is better)
Translates to: SPCAFHGCIGCSIMEVKRQKNLV*FVSSAT
Trigger: GGTGGCCGAGGAGACGAACAATACAAGGTTCTTCTG...TCTCTTTACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp CACCCCTGCTACTGTTCACTGGTTGAGGACTCACCCCTGCTACTGTTCACTGGTCTGCTCTCCACTATCTaGGTCATGCAGTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: HPCYCSLVEDSPLLLFTGLLSTI*VMQLSF
Trigger: GAAACTTAACTGCATGACCAAGATAGTGGAGAGCAG...ACCAGTGAACAGTAGCAGGGGTGAGTCCTCAACCAGTGAACAGTAGCAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp AGGGAGAGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGTCTCCGCCAACTCCTaGCTCAGTTTGATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: REREPCGSWSVLSIWHFQVSANS*LSLMAF
Trigger: GAAAGCCATCAAACTGAGCAAGGAGTTGGCGGAGAC...CTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 90 bp GAGTGGCGATCTGAAAGCTGTCCTTCGTGCTGTCTTTGCTGGGTGTaGAGACGGATGGGTTTTTGGACGCTTGGAGTTCTTTTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: EWRSESCPSCCLCWV*RRMGFWTLGVLFLP
Trigger: TGGAAGAAAAAGAACTCCAAGCGTCCAAAAACCCATCCGTCTTCACACCCAGCAAAGACAGCACGAAGGACAGCTTTCAGATCGCCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 90 bp GCATCTTCCATTTTCTTATTATCACCCTTGTACACCACCAGGTCGTaGCTCCCATCCTGCAGCGTGGTACCATCTGCGTTCATCAGTTTC +
Preference number: 5 (lower is better)
Translates to: ASSIFLLSPLYTTRS*LPSCSVVPSAFISF
Trigger: GAAACTGATGAACGCAGATGGTACCACGCTGCAGGATGGGAGGCACGACCTGGTGGTGTACAAGGGTGATAATAAGAAAATGGAAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp AGGGAGAGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGTCGGTGAACACTGCTaGCAGGTTATTCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: REREPCGSWSVLSIWHFQVGEHC*QVIQLL
Trigger: GAGAAGCTGAATAACCTGCAAGCAGTGTTCACCGAC...CTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATTCCGTGCTATTGCTGTaGATCTGTCCACCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHSVLLL*ICPPGV
Trigger: CACACCTGGTGGACAGATCAACAGCAATAGCACGGA...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp TCGCAGCTAACAACTGATGGCTTGACTCTGAACCCACCCAAAGAGATCCTTCACGTCTTCTTCTTCCCCTaGTCAAACTCCCCATGGATC +
Preference number: 5 (lower is better)
Translates to: SQLTTDGLTLNPPKEILHVFFFP*SNSPWI
Trigger: GATCCATGGGGAGTTTGACAAGGGGAAGAAGAAGAC...GTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp GCAGTGACAAGGTGGCCATTGTCCCATCTCAGCTCCCGTGACACGCCTTGTTTTACAATTTTGTTGCGCTaGGCTTCTGAGAAGGTTTCA +
Preference number: 5 (lower is better)
Translates to: AVTRWPLSHLSSRDTPCFTILLR*ASEKVS
Trigger: TGAAACCTTCTCAGAAGCCAAGCGCAACAAAATTGT...AAAACAAGGCGTGTCACGGGAGCTGAGATGGGACAATGGCCACCTTGTCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp AGGGAGAGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGTGCTTTGGGGATGACTaGATGTCTTCTCCTGGTGGT +
Preference number: 5 (lower is better)
Translates to: REREPCGSWSVLSIWHFQCFGDD*MSSPGG
Trigger: ACCACCAGGAGAAGACATCAAGTCATCCCCAAAGCA...CTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp CCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGAGGTTGTACATTTGCTGACCCTCTCGTaGGTCAGCTCCATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: PCGSWSVLSIWHFQEVVHLLTLS*VSSMVS
Trigger: AGAAACCATGGAGCTGACCAACGAGAGGGTCAGCAA...ATGTACAACCTCCTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp GAGAAATGTGGATTCCAGTTCCTAGAGCAAAAGCCTTTGGACAGAAATCTCACTTCGAGCCTGCACGGCTaGGCTTCCTCTCTGTCATGC +
Preference number: 5 (lower is better)
Translates to: EKCGFQFLEQKPLDRNLTSSLHG*ASSLSC
Trigger: GCATGACAGAGAGGAAGCCAAGCCGTGCAGGCTCGA...AGTGAGATTTCTGTCCAAAGGCTTTTGCTCTAGGAACTGGAATCCACATTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 90 bp CTGTTGATCTGTCCACCAGGTGTGAAAAGTTCTTCTGCACCTGTGTaGGGTCACCTGGCAGTAACTTTAAGGACACCCAAAGACCTTGTC +
Preference number: 5 (lower is better)
Translates to: LLICPPGVKSSSAPV*GHLAVTLRTPKDLV
Trigger: GACAAGGTCTTTGGGTGTCCTTAAAGTTACTGCCAGGTGACCTCACACAGGTGCAGAAGAACTTTTCACACCTGGTGGACAGATCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 90 bp ATGCAGTTAAGTTTCTGCCGCACCAACTGGTTGTCAGGGATGCTTTaGATGAACTTGCAGAAGAGCACGCTGAGCTCCATGGGATCAAAC +
Preference number: 5 (lower is better)
Translates to: MQLSFCRTNWLSGML*MNLQKSTLSSMGSN
Trigger: GTTTGATCCCATGGAGCTCAGCGTGCTCTTCTGCAAGTTCATTCAAAGCATCCCTGACAACCAGTTGGTGCGGCAGAAACTTAACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 90 bp AAGCTTGCCTGGTCCATGAAGCTCTTGGTGAGAACCTCAGCAAACTaGTTGATGGCACGGAGGAAAACTCTGTTCTGGGTCATGTTCATG +
Preference number: 5 (lower is better)
Translates to: KLAWSMKLLVRTSAN*LMARRKTLFWVMFM
Trigger: CATGAACATGACCCAGAACAGAGTTTTCCTCCGTGCCATCAATCAGTTTGCTGAGGTTCTCACCAAGAGCTTCATGGACCAGGCAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 90 bp CTTGAAGTTCACATAGAGCCCATAGGTGTGGACAGTACTGAAGATTaGCTGGCCTCTCAAGTCCAGGTTCTGCAAAATGCTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LEVHIEPIGVDSTED*LASQVQVLQNALLL
Trigger: GAGGAGAAGAGCATTTTGCAGAACCTGGACTTGAGAGGCCAGGCAATCTTCAGTACTGTCCACACCTATGGGCTCTATGTGAACTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp GAGAAATGTGGATTCCAGTTCCTAGAGCAAAAGCCTTTGGACAGAAATCTCACTCCACAGGTGTGCTTCTaGCCCTCCTTCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: EKCGFQFLEQKPLDRNLTPQVCF*PSFSSM
Trigger: CATGGAGCTGAAGGAGGGCAAGAAGCACACCTGTGG...AGTGAGATTTCTGTCCAAAGGCTTTTGCTCTAGGAACTGGAATCCACATTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp AGGGAGAGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGCCATTTTCCGTGCTATaGCTGTTGATCTGTCCACCA +
Preference number: 5 (lower is better)
Translates to: REREPCGSWSVLSIWHFQPFSVL*LLICPP
Trigger: TGGTGGACAGATCAACAGCAATAGCACGGAAAATGG...CTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp GGGAATCACAGGAAAATGCCTGACAAGAAGGGATTGGCACATCTAGGCACCAATCTCGTACCAACAGGGTaGCTTGACCTGGTAATACAC +
Preference number: 5 (lower is better)
Translates to: GNHRKMPDKKGLAHLGTNLVPTG*LDLVIH
Trigger: GTGTATTACCAGGTCAAGCAACCCTGTTGGTACGAG...ATTGGTGCCTAGATGTGCCAATCCCTTCTTGTCAGGCATTTTCCTGTGATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp TTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGCTCCATCATGGAAGTATGGGTTTTTGGACGCTaGGAGTTCTTTTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: FQSPCAFHGCIGCSIMEVWVFGR*EFFFFQ
Trigger: CTGGAAGAAAAAGAACTCCAAGCGTCCAAAAACCCA...TACTTCCATGATGGAGCACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp GGGAGCTTTGAGACCATTTCAGAGCCCGTGTGCTTTCCATGGCTGCATTGGGTGATGACCATCCAATCTTaGGCATACACATTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: GSFETISEPVCFPWLHWVMTIQS*AYTFFP
Trigger: TGGAAAGAATGTGTATGCCAAAGATTGGATGGTCAT...CACCCAATGCAGCCATGGAAAGCACACGGGCTCTGAAATGGTCTCAAAGCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp GAATGTCAGAATGTGAGCCTGCGGTATCTCCAGAGAAGGCATCCACACCTGAGAGGGATGAATTTGATTTaGTGTGGCCCCAGGTTATAC +
Preference number: 5 (lower is better)
Translates to: ECQNVSLRYLQRRHPHLRGMNLI*CGPRLY
Trigger: GTATAACCTGGGGCCACACAAAATCAAATTCATCCC...TCTCAGGTGTGGATGCCTTCTCTGGAGATACCGCAGGCTCACATTCTGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp TCAAGAGGAAAACCATTTCTTTCGCAGCTAACAACTGATGGCTTGACTCTGAACGGCCTGGACGATGCATaGTCAGAAGAGTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SRGKPFLSQLTTDGLTLNGLDDA*SEELEE
Trigger: CTCCTCCAACTCTTCTGACAATGCATCGTCCAGGCC...GTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGAAAGAAATGGTTTTCCTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp TCGCAGCTAACAACTGATGGCTTGACTCTGAACCCACCCAAAGAGATCCTTCACTTCCAGTCTTTCCTCTaGAACTTGCTAATCCGGTTC +
Preference number: 5 (lower is better)
Translates to: SQLTTDGLTLNPPKEILHFQSFL*NLLIRF
Trigger: GAACCGGATTAGCAAGTTCAAGAGGAAAGACTGGAA...GTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp TTCCCAAAGAGGTTATTCTGCCAGGGCCTTGTAAACCAGCACCTACCTACGCCAGCAATGACTTGTGATTaGCTCAGATTCCAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: FPKRLFCQGLVNQHLPTPAMTCD*LRFQSF
Trigger: GAAAGACTGGAATCTGAGCAAATCACAAGTCATTGC...TGGCGTAGGTAGGTGCTGGTTTACAAGGCCCTGGCAGAATAACCTCTTTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 90 bp TCTGTACGTGGTTCTTTCAATCCACATGGTGGCAAACTCATTTTCTaGGTCTTTTTCTCCTTTCCGGAATGGCCGGGAATAGCTGAACTG +
Preference number: 5 (lower is better)
Translates to: SVRGSFNPHGGKLIF*VFFSFPEWPGIAEL
Trigger: CAGTTCAGCTATTCCCGGCCATTCCGGAAAGGAGAAAAAGACCCAGAAAATGAGTTTGCCACCATGTGGATTGAAAGAACCACGTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp TCGCAGCTAACAACTGATGGCTTGACTCTGAACCCACCCAAAGAGATCCTTCACGCTTTCTCTAAAAGGTaGCCTTCCTCATCAAACACA +
Preference number: 5 (lower is better)
Translates to: SQLTTDGLTLNPPKEILHAFSKR*PSSSNT
Trigger: TGTGTTTGATGAGGAAGGCAACCTTTTAGAGAAAGC...GTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp TCGCAGCTAACAACTGATGGCTTGACTCTGAACCCACCCAAAGAGATCCTTCACCCATTTCCACTCAAATaGAACTCGCACTGCATCATA +
Preference number: 5 (lower is better)
Translates to: SQLTTDGLTLNPPKEILHPFPLK*NSHCII
Trigger: TATGATGCAGTGCGAGTTCAATTTGAGTGGAAATGG...GTGAAGGATCTCTTTGGGTGGGTTCAGAGTCAAGCCATCAGTTGTTAGCTGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 90 bp AGGCCTGTCCATCAGCGTGTTGAAAGCAAGAAACAGCTGGCGGATTaGGTCGTTAAATTCATCTCCATCTTCACTCTGACCATAAAACCT +
Preference number: 5 (lower is better)
Translates to: RPVHQRVESKKQLAD*VVKFISIFTLTIKP
Trigger: AGGTTTTATGGTCAGAGTGAAGATGGAGATGAATTTAACGACTCAATCCGCCAGCTGTTTCTTGCTTTCAACACGCTGATGGACAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 90 bp GACGGATGGGTTTTTGGACGCTTGGAGTTCTTTTTCTTCCAGCTCTaGTTTGGTCCCAGGCAGAGTCAGATAATATTTAGCATCTTCCAT +
Preference number: 5 (lower is better)
Translates to: DGWVFGRLEFFFFQL*FGPRQSQIIFSIFH
Trigger: ATGGAAGATGCTAAATATTATCTGACTCTGCCTGGGACCAAAGCAGAGCTGGAAGAAAAAGAACTCCAAGCGTCCAAAAACCCATCCGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 90 bp AAATGGATGTATGTCTCAGGAAAAATGCCCTTTTTAGATCTGTTCTaGAGCGCGTATCCTCTGTACCAGCCCTCATACATCTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: KWMYVSGKMPFLDLF*SAYPLYQPSYISRM
Trigger: CATCCTGGAGATGTATGAGGGCTGGTACAGAGGATACGCGCTCCAGAACAGATCTAAAAAGGGCATTTTTCCTGAGACATACATCCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp GAGAAATGTGGATTCCAGTTCCTAGAGCAAAAGCCTTTGGACAGAAATCTCACTCTGTCCATCAGCGTGTaGAAAGCAAGAAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: EKCGFQFLEQKPLDRNLTLSISV*KARNSW
Trigger: CCAGCTGTTTCTTGCTTTCAACACGCTGATGGACAG...AGTGAGATTTCTGTCCAAAGGCTTTTGCTCTAGGAACTGGAATCCACATTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp AGGGAGAGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGTTTTTCACAATTTTGTaGCGCTTGGCTTCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: REREPCGSWSVLSIWHFQFFTIL*RLASEK
Trigger: CTTCTCAGAAGCCAAGCGCAACAAAATTGTGAAAAA...CTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 90 bp TCACCTGGCAGTAACTTTAAGGACACCCAAAGACCTTGTCCTTTGTaGTTCACTTCCTTTGCAGCTATGACTTTATTTAGGACCGACGTG +
Preference number: 5 (lower is better)
Translates to: SPGSNFKDTQRPCPL*FTSFAAMTLFRTDV
Trigger: CACGTCGGTCCTAAATAAAGTCATAGCTGCAAAGGAAGTGAATCACAAAGGACAAGGTCTTTGGGTGTCCTTAAAGTTACTGCCAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp TTCAATACCTCAGAGATCTTAGCAAGGGCAATAAAGACTGGTTCTTCTGTCCCCGGTCTCCATGGCAATTaGCTGAAAGGGGATAAAATG +
Preference number: 5 (lower is better)
Translates to: FNTSEILARAIKTGSSVPGLHGN*LKGDKM
Trigger: CATTTTATCCCCTTTCAGCAAATTGCCATGGAGACC...GGGGACAGAAGAACCAGTCTTTATTGCCCTTGCTAAGATCTCTGAGGTATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp TTCAATACCTCAGAGATCTTAGCAAGGGCAATAAAGACTGGTTCTTCTGTCCCCAAGACGGATGGGTTTTaGGACGCTTGGAGTTCTTTT +
Preference number: 5 (lower is better)
Translates to: FNTSEILARAIKTGSSVPKTDGF*DAWSSF
Trigger: AAAAGAACTCCAAGCGTCCAAAAACCCATCCGTCTT...GGGGACAGAAGAACCAGTCTTTATTGCCCTTGCTAAGATCTCTGAGGTATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp AGGGAGAGAGAACCATGTGGCTCCTGGAGTGTACTTAGTATCTGGCACTTTCAGGGATCAAACACCAGTTaGACATCATTAATTATGCTG +
Preference number: 5 (lower is better)
Translates to: REREPCGSWSVLSIWHFQGSNTS*TSLIML
Trigger: CAGCATAATTAATGATGTCAAACTGGTGTTTGATCC...CTGAAAGTGCCAGATACTAAGTACACTCCAGGAGCCACATGGTTCTCTCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp TTCAATACCTCAGAGATCTTAGCAAGGGCAATAAAGACTGGTTCTTCTGTCCCCTTTTCCAGAAGAACCTaGTATTGTTCGTCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: FNTSEILARAIKTGSSVPFSRRT*YCSSPR
Trigger: CCGAGGAGACGAACAATACAAGGTTCTTCTGGAAAA...GGGGACAGAAGAACCAGTCTTTATTGCCCTTGCTAAGATCTCTGAGGTATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp CTCTTCTTGTCCTGTCTGTATTTAAACGGCATTGAAGTCTTCAACTTTAGTACTTTGGCTTCGAACCACTaGAGGATCCCAGGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: LFLSCLYLNGIEVFNFSTLASNH*RIPGKV
Trigger: TACCTTCCCTGGGATCCTCAAGTGGTTCGAAGCCAA...AGTACTAAAGTTGAAGACTTCAATGCCGTTTAAATACAGACAGGACAAGAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp CTCTTCTTGTCCTGTCTGTATTTAAACGGCATTGAAGTCTTCAACTTTAGTACTTGGTCCATGAAGCTCTaGGTGAGAACCTCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: LFLSCLYLNGIEVFNFSTWSMKL*VRTSAN
Trigger: GTTTGCTGAGGTTCTCACCAAGAGCTTCATGGACCA...AGTACTAAAGTTGAAGACTTCAATGCCGTTTAAATACAGACAGGACAAGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp AACTTGATACAAGCTAATCATAACAATAGAAGCCCTAAGACACCTTCCCAAAGACTCATGCGGTTCTCCTaGCTCTCATCATGTATGATG +
Preference number: 5 (lower is better)
Translates to: NLIQANHNNRSPKTPSQRLMRFS*LSSCMM
Trigger: CATCATACATGATGAGAGCAAGGAGAACCGCATGAG...TCTTTGGGAAGGTGTCTTAGGGCTTCTATTGTTATGATTAGCTTGTATCAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp AATATCACGGAGTCACAAGCCATCAATCAATATTCATTCATAAAGACTGTGACAGGACACCCAAAGACCTaGTCCTTTGTGATTCACTTC +
Preference number: 5 (lower is better)
Translates to: NITESQAINQYSFIKTVTGHPKT*SFVIHF
Trigger: GAAGTGAATCACAAAGGACAAGGTCTTTGGGTGTCC...TGTCACAGTCTTTATGAATGAATATTGATTGATGGCTTGTGACTCCGTGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS-3UTR CAA 90 bp AATATCACGGAGTCACAAGCCATCAATCAATATTCATTCATAAAGACTGTGACAAATGCTCTTCTCCTCTaGGATCTTTTCCTCTATCCT +
Preference number: 5 (lower is better)
Translates to: NITESQAINQYSFIKTVTNALLL*DLFLYP
Trigger: AGGATAGAGGAAAAGATCCAAGAGGAGAAGAGCATT...TGTCACAGTCTTTATGAATGAATATTGATTGATGGCTTGTGACTCCGTGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp CACGGAAGCACGAAGATAGCCGGGCATGCAGCGGCTTaGGCTGCTCCGTCAGCTTCTCCCCGTGGATGCGGA +
Preference number: 6 (lower is better)
Translates to: HGSTKIAGHAAA*AAPSASPRGCG
Trigger: TCCGCATCCACGGGGAGAAGCTGACGGAGCAGCTCAAGCCGCTGCATGCCCGGCTATCTTCGTGCTTCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp GCCCACCCGGACAATCTGGCACACGAGGCTGATGCGTaGCCGGATGAGGTCTGTGCTGCTGAGGTCGGTGAA +
Preference number: 6 (lower is better)
Translates to: AHPDNLAHEADA*PDEVCAAEVGE
Trigger: TTCACCGACCTCAGCAGCACAGACCTCATCCGGCCACGCATCAGCCTCGTGTGCCAGATTGTCCGGGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 72 bp TCACGGAAGCACGAAGATAGCCGGGCATGCAGCGGCTaGAGCTGCTCCGTCAGCTTCTCCCCGTGGATGCGG +
Preference number: 6 (lower is better)
Translates to: SRKHEDSRACSG*SCSVSFSPWMR
Trigger: CCGCATCCACGGGGAGAAGCTGACGGAGCAGCTCAAGCCGCTGCATGCCCGGCTATCTTCGTGCTTCCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp GGTCCGGTTTGGTTGAGTGGTCGTCCAGCTGGCCACTaGGCTGGTCTGTCAGTAGCGGCAGCAGCACTTCCC +
Preference number: 6 (lower is better)
Translates to: GPVWLSGRPAGH*AGLSVAAAALP
Trigger: GGGAAGTGCTGCTGCCGCTACTGACAGACCAGCTCAGTGGCCAGCTGGACGACCACTCAACCAAACCGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp GAGAGCGGGTGCACAGAGAGAGAATGGTCCCAGGCGTaGTGCTGCACGCAGTTGCTGACCCTCTCGTTGGTC +
Preference number: 6 (lower is better)
Translates to: ESGCTEREWSQA*CCTQLLTLSLV
Trigger: GACCAACGAGAGGGTCAGCAACTGCGTGCAGCAGCACGCCTGGGACCATTCTCTCTCTGTGCACCCGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp AAGCACGAAGATAGCCGGGCATGCAGCGGCTTGAGCTaGTCCGTCAGCTTCTCCCCGTGGATGCGGATCCCT +
Preference number: 6 (lower is better)
Translates to: KHEDSRACSGLS*SVSFSPWMRIP
Trigger: AGGGATCCGCATCCACGGGGAGAAGCTGACGGAGCAGCTCAAGCCGCTGCATGCCCGGCTATCTTCGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp TTGGGAGTGAGTGGGGGTGGGCTCAAGGCTGTAGACTaGAGAGGCGAGGGACTGTGGAATGGTGTCAGCCGG +
Preference number: 6 (lower is better)
Translates to: LGVSGGGLKAVD*RGEGLWNGVSR
Trigger: CCGGCTGACACCATTCCACAGTCCCTCGCCTCTGCAGTCTACAGCCTTGAGCCCACCCCCACTCACTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 90 bp TCCTTGAGTTCACGGAAGCACGAAGATAGCCGGGCATGCAGCGGCTaGAGCTGCTCCGTCAGCTTCTCCCCGTGGATGCGGATCCCTTCC +
Preference number: 6 (lower is better)
Translates to: SLSSRKHEDSRACSG*SCSVSFSPWMRIPS
Trigger: GGAAGGGATCCGCATCCACGGGGAGAAGCTGACGGAGCAGCTCAAGCCGCTGCATGCCCGGCTATCTTCGTGCTTCCGTGAACTCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp TCCTTGAGTTCACGGAAGCACGAAGATAGCCGGGCATaGAGCGGCTTGAGCTGCTCCGTCAGCTTCTCCCCG +
Preference number: 6 (lower is better)
Translates to: SLSSRKHEDSRA*SGLSCSVSFSP
Trigger: CGGGGAGAAGCTGACGGAGCAGCTCAAGCCGCTGCATGCCCGGCTATCTTCGTGCTTCCGTGAACTCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp CGTGGAGGACAGGATGTAGGGCAGTACCATCGAGCCTaGACGGCTTGGCTTCCTCTCTGTCATGCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: RGGQDVGQYHRA*TAWLPLCHAGW
Trigger: CCACCCAGCATGACAGAGAGGAAGCCAAGCCGTGCAGGCTCGATGGTACTGCCCTACATCCTGTCCTCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp GGTTTGGTTGAGTGGTCGTCCAGCTGGCCACTGAGCTaGTCTGTCAGTAGCGGCAGCAGCACTTCCCTGCAC +
Preference number: 6 (lower is better)
Translates to: GLVEWSSSWPLS*SVSSGSSTSLH
Trigger: GTGCAGGGAAGTGCTGCTGCCGCTACTGACAGACCAGCTCAGTGGCCAGCTGGACGACCACTCAACCAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp GGGCTCAAGGCTGTAGACTGCAGAGGCGAGGGACTGTaGAATGGTGTCAGCCGGCTGTCCACCAACTGGAGA +
Preference number: 6 (lower is better)
Translates to: GLKAVDCRGEGL*NGVSRLSTNWR
Trigger: TCTCCAGTTGGTGGACAGCCGGCTGACACCATTCCACAGTCCCTCGCCTCTGCAGTCTACAGCCTTGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp TGGAGGTGGGGCTTTGGAGTCTCTCCGGACAGGCAGTaGGGGAGCAATCTCAGCCGAGTTCCTCTGACTGCT +
Preference number: 6 (lower is better)
Translates to: WRWGFGVSPDRQ*GSNLSRVPLTA
Trigger: AGCAGTCAGAGGAACTCGGCTGAGATTGCTCCCCCACTGCCTGTCCGGAGAGACTCCAAAGCCCCACCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 90 bp ACTGAGAGCCTGGCTCAGAAGAGAGGATGCCTGATTTCCGAGCCTTaGGAGGGGGTGGAGGTGGGGCTTTGGAGTCTCTCCGGACAGGCA +
Preference number: 6 (lower is better)
Translates to: TESLAQKRGCLISEP*EGVEVGLWSLSGQA
Trigger: TGCCTGTCCGGAGAGACTCCAAAGCCCCACCTCCACCCCCTCCAAAGGCTCGGAAATCAGGCATCCTCTCTTCTGAGCCAGGCTCTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp AGCTGTGAGCTTGCCTCGTGGTCCGGTTTGGTTGAGTaGTCGTCCAGCTGGCCACTGAGCTGGTCTGTCAGT +
Preference number: 6 (lower is better)
Translates to: SCELASWSGLVE*SSSWPLSWSVS
Trigger: ACTGACAGACCAGCTCAGTGGCCAGCTGGACGACCACTCAACCAAACCGGACCACGAGGCAAGCTCACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 90 bp CCGTCCTGTCTAGCACCTCTAGGATGTTGCTTAGAAGCTGTGAGCTaGCCTCGTGGTCCGGTTTGGTTGAGTGGTCGTCCAGCTGGCCAC +
Preference number: 6 (lower is better)
Translates to: PSCLAPLGCCLEAVS*PRGPVWLSGRPAGH
Trigger: GTGGCCAGCTGGACGACCACTCAACCAAACCGGACCACGAGGCAAGCTCACAGCTTCTAAGCAACATCCTAGAGGTGCTAGACAGGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp ATGACGGCCCATTCTCGTAGCGTGTTTGTGAGCTCCTaGACCAGGGGCAACTCCCCGGGAATCACGGTCTCA +
Preference number: 6 (lower is better)
Translates to: MTAHSRSVFVSS*TRGNSPGITVS
Trigger: TGAGACCGTGATTCCCGGGGAGTTGCCCCTGGTTCAGGAGCTCACAAACACGCTACGAGAATGGGCCGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp CAGGTCGTGCCTCCCATCCTGCAGCGTGGTACCATCTaGGTTCATCAGTTTCACAAAGGCCACCCCAAAGGC +
Preference number: 6 (lower is better)
Translates to: QVVPPILQRGTI*VHQFHKGHPKG
Trigger: GCCTTTGGGGTGGCCTTTGTGAAACTGATGAACGCAGATGGTACCACGCTGCAGGATGGGAGGCACGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp TGCAGCGGCTTGAGCTGCTCCGTCAGCTTCTCCCCGTaGATGCGGATCCCTTCCGTAAGCAGAGGTATTTGT +
Preference number: 6 (lower is better)
Translates to: CSGLSCSVSFSP*MRIPSVSRGIC
Trigger: ACAAATACCTCTGCTTACGGAAGGGATCCGCATCCACGGGGAGAAGCTGACGGAGCAGCTCAAGCCGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp CAGGATGTAGGGCAGTACCATCGAGCCTGCACGGCTTaGCTTCCTCTCTGTCATGCTGGGTGGCAGCGTTAT +
Preference number: 6 (lower is better)
Translates to: QDVGQYHRACTA*LPLCHAGWQRY
Trigger: ATAACGCTGCCACCCAGCATGACAGAGAGGAAGCCAAGCCGTGCAGGCTCGATGGTACTGCCCTACATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp ACAGGGGTTCCAGGATGGACCCATCCGATCCTGGCCTaGACGATGCATTGTCAGAAGAGTTGGAGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: TGVPGWTHPILA*TMHCQKSWRRW
Trigger: CCACCTCCTCCAACTCTTCTGACAATGCATCGTCCAGGCCAGGATCGGATGGGTCCATCCTGGAACCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp CAAGGCTGTAGACTGCAGAGGCGAGGGACTGTGGAATaGTGTCAGCCGGCTGTCCACCAACTGGAGACTCTT +
Preference number: 6 (lower is better)
Translates to: QGCRLQRRGTVE*CQPAVHQLETL
Trigger: AAGAGTCTCCAGTTGGTGGACAGCCGGCTGACACCATTCCACAGTCCCTCGCCTCTGCAGTCTACAGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 72 bp GGGCCCACATCCGTCCTGTCTAGCACCTCTAGGATGTaGCTTAGAAGCTGTGAGCTTGCCTCGTGGTCCGGT +
Preference number: 6 (lower is better)
Translates to: GPTSVLSSTSRM*LRSCELASWSG
Trigger: ACCGGACCACGAGGCAAGCTCACAGCTTCTAAGCAACATCCTAGAGGTGCTAGACAGGACGGATGTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 72 bp ACAGGATGTAGGGCAGTACCATCGAGCCTGCACGGCTaGGCTTCCTCTCTGTCATGCTGGGTGGCAGCGTTA +
Preference number: 6 (lower is better)
Translates to: TGCRAVPSSLHG*ASSLSCWVAAL
Trigger: TAACGCTGCCACCCAGCATGACAGAGAGGAAGCCAAGCCGTGCAGGCTCGATGGTACTGCCCTACATCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 90 bp GCTGAAGTGGGGCCCACATCCGTCCTGTCTAGCACCTCTAGGATGTaGCTTAGAAGCTGTGAGCTTGCCTCGTGGTCCGGTTTGGTTGAG +
Preference number: 6 (lower is better)
Translates to: AEVGPTSVLSSTSRM*LRSCELASWSGLVE
Trigger: CTCAACCAAACCGGACCACGAGGCAAGCTCACAGCTTCTAAGCAACATCCTAGAGGTGCTAGACAGGACGGATGTGGGCCCCACTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp ATCCTTCTCAGCAGCCTCTCCATGATCAGCTGTACGTaGGCTGAAGTGGGGCCCACATCCGTCCTGTCTAGC +
Preference number: 6 (lower is better)
Translates to: ILLSSLSMISCT*AEVGPTSVLSS
Trigger: GCTAGACAGGACGGATGTGGGCCCCACTTCAGCTCACGTACAGCTGATCATGGAGAGGCTGCTGAGAAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 72 bp AGGATGGACCCATCCGATCCTGGCCTGGACGATGCATaGTCAGAAGAGTTGGAGGAGGTGGAGATCACCGAG +
Preference number: 6 (lower is better)
Translates to: RMDPSDPGLDDA*SEELEEVEITE
Trigger: CTCGGTGATCTCCACCTCCTCCAACTCTTCTGACAATGCATCGTCCAGGCCAGGATCGGATGGGTCCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp TTCCAGGATGGACCCATCCGATCCTGGCCTGGACGATaGATTGTCAGAAGAGTTGGAGGAGGTGGAGATCAC +
Preference number: 6 (lower is better)
Translates to: FQDGPIRSWPGR*IVRRVGGGGDH
Trigger: GTGATCTCCACCTCCTCCAACTCTTCTGACAATGCATCGTCCAGGCCAGGATCGGATGGGTCCATCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp TATCCTCTGTACCAGCCCTCATACATCTCCAGGATGTaGACGGTGTCGCCGATCTGCAAGGAGAGCTCCACA +
Preference number: 6 (lower is better)
Translates to: YPLYQPSYISRM*TVSPICKESST
Trigger: TGTGGAGCTCTCCTTGCAGATCGGCGACACCGTCCACATCCTGGAGATGTATGAGGGCTGGTACAGAGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp TCTAGGATGTTGCTTAGAAGCTGTGAGCTTGCCTCGTaGTCCGGTTTGGTTGAGTGGTCGTCCAGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: SRMLLRSCELAS*SGLVEWSSSWP
Trigger: TGGCCAGCTGGACGACCACTCAACCAAACCGGACCACGAGGCAAGCTCACAGCTTCTAAGCAACATCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 90 bp CTGGGTGGCAGCGTTATGACTCCATACAGCTTCTCTACTTTCTCCTaGAGTTCACGGAAGCACGAAGATAGCCGGGCATGCAGCGGCTTG +
Preference number: 6 (lower is better)
Translates to: LGGSVMTPYSFSTFS*SSRKHEDSRACSGL
Trigger: CAAGCCGCTGCATGCCCGGCTATCTTCGTGCTTCCGTGAACTCAAGGAGAAAGTAGAGAAGCTGTATGGAGTCATAACGCTGCCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp GTACCAACAGGGTTGCTTGACCTGGTAATACACCACTaGCTTGTACTCCGAGACGCCTTCGTACCCAGCACC +
Preference number: 6 (lower is better)
Translates to: VPTGLLDLVIHH*LVLRDAFVPST
Trigger: GGTGCTGGGTACGAAGGCGTCTCGGAGTACAAGTCAGTGGTGTATTACCAGGTCAAGCAACCCTGTTGGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp TGGGTGAGCTTTGTGGAGCAGATGAGAGTGGCGATCTaGAAGCTGTCCTTCGTGCTGTCTTTGCTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: WVSFVEQMRVAI*KLSFVLSLLGV
Trigger: CACACCCAGCAAAGACAGCACGAAGGACAGCTTTCAGATCGCCACTCTCATCTGCTCCACAAAGCTCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp GCCTGCACGGCTTGGCTTCCTCTCTGTCATGCTGGGTaGCAGCGTTATGACTCCATACAGCTTCTCTACTTT +
Preference number: 6 (lower is better)
Translates to: ACTAWLPLCHAG*QRYDSIQLLYF
Trigger: AAAGTAGAGAAGCTGTATGGAGTCATAACGCTGCCACCCAGCATGACAGAGAGGAAGCCAAGCCGTGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp TTCAAACAGGGGTTCCAGGATGGACCCATCCGATCCTaGCCTGGACGATGCATTGTCAGAAGAGTTGGAGGA +
Preference number: 6 (lower is better)
Translates to: FKQGFQDGPIRS*PGRCIVRRVGG
Trigger: TCCTCCAACTCTTCTGACAATGCATCGTCCAGGCCAGGATCGGATGGGTCCATCCTGGAACCCCTGTTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 72 bp CTAGCACCTCTAGGATGTTGCTTAGAAGCTGTGAGCTaGCCTCGTGGTCCGGTTTGGTTGAGTGGTCGTCCA +
Preference number: 6 (lower is better)
Translates to: LAPLGCCLEAVS*PRGPVWLSGRP
Trigger: TGGACGACCACTCAACCAAACCGGACCACGAGGCAAGCTCACAGCTTCTAAGCAACATCCTAGAGGTGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp TTCTTTGGGTGGCAGATCTTCAACTCTGGCACCCGATaGAGCTCTGCGTTCAAACAGGGGTTCCAGGATGGA +
Preference number: 6 (lower is better)
Translates to: FFGWQIFNSGTR*SSAFKQGFQDG
Trigger: TCCATCCTGGAACCCCTGTTTGAACGCAGAGCTTCATCGGGTGCCAGAGTTGAAGATCTGCCACCCAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp ATGAGGTCTGTGCTGCTGAGGTCGGTGAACACTGCTTaGAGGTTATTCAGCTTCTCGATCTCCTTGGGCATC +
Preference number: 6 (lower is better)
Translates to: MRSVLLRSVNTA*RLFSFSISLGI
Trigger: GATGCCCAAGGAGATCGAGAAGCTGAATAACCTGCAAGCAGTGTTCACCGACCTCAGCAGCACAGACCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp TCAAGAGACTGCCTAGGCCCTCGTAGTCAAACACTTTaGTCTCGTAGGTCTCCGCCAACTCCTTGCTCAGTT +
Preference number: 6 (lower is better)
Translates to: SRDCLGPRSQTL*SRRSPPTPCSV
Trigger: AACTGAGCAAGGAGTTGGCGGAGACCTACGAGAGCAAAGTGTTTGACTACGAGGGCCTAGGCAGTCTCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 90 bp CGTGCTGTCTTTGCTGGGTGTGAAGACGGATGGGTTTTTGGACGCTaGGAGTTCTTTTTCTTCCAGCTCTGCTTTGGTCCCAGGCAGAGT +
Preference number: 6 (lower is better)
Translates to: RAVFAGCEDGWVFGR*EFFFFQLCFGPRQS
Trigger: ACTCTGCCTGGGACCAAAGCAGAGCTGGAAGAAAAAGAACTCCAAGCGTCCAAAAACCCATCCGTCTTCACACCCAGCAAAGACAGCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp TTGTACTCCGAGACGCCTTCGTACCCAGCACCGGGATaGATGGCTTTCTCTAAAAGGTTGCCTTCCTCATCA +
Preference number: 6 (lower is better)
Translates to: LYSETPSYPAPG*MAFSKRLPSSS
Trigger: TGATGAGGAAGGCAACCTTTTAGAGAAAGCCATTCATCCCGGTGCTGGGTACGAAGGCGTCTCGGAGTACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp AGTTTCTGCCGCACCAACTGGTTGTCAGGGATGCTTTaGATGAACTTGCAGAAGAGCACGCTGAGCTCCATG +
Preference number: 6 (lower is better)
Translates to: SFCRTNWLSGML*MNLQKSTLSSM
Trigger: CATGGAGCTCAGCGTGCTCTTCTGCAAGTTCATTCAAAGCATCCCTGACAACCAGTTGGTGCGGCAGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp ATTTTCTTATTATCACCCTTGTACACCACCAGGTCGTaGCTCCCATCCTGCAGCGTGGTACCATCTGCGTTC +
Preference number: 6 (lower is better)
Translates to: IFLLSPLYTTRS*LPSCSVVPSAF
Trigger: GAACGCAGATGGTACCACGCTGCAGGATGGGAGGCACGACCTGGTGGTGTACAAGGGTGATAATAAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp AGTGGCTGTCCTCCATTTGTCGTAAGACGGCAATCATaGAAGCCACAAAGCTGCCAATGTGAGGAGACTGTC +
Preference number: 6 (lower is better)
Translates to: SGCPPFVVRRQS*KPQSCQCEETV
Trigger: GACAGTCTCCTCACATTGGCAGCTTTGTGGCTTGCATGATTGCCGTCTTACGACAAATGGAGGACAGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp TCTCACTGTCTTCTTTGGGTGGCAGATCTTCAACTCTaGCACCCGATGAAGCTCTGCGTTCAAACAGGGGTT +
Preference number: 6 (lower is better)
Translates to: SHCLLWVADLQL*HPMKLCVQTGV
Trigger: AACCCCTGTTTGAACGCAGAGCTTCATCGGGTGCCAGAGTTGAAGATCTGCCACCCAAAGAAGACAGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 90 bp ACAGGTTTTACCGTGAAGCACTGCAGGTACTGCTTTGGGGATGACTaGATGTCTTCTCCTGGTGGTGTGGTACTGGTCATCTTCTCAGCA +
Preference number: 6 (lower is better)
Translates to: TGFTVKHCRYCFGDD*MSSPGGVVLVIFSA
Trigger: TGCTGAGAAGATGACCAGTACCACACCACCAGGAGAAGACATCAAGTCATCCCCAAAGCAGTACCTGCAGTGCTTCACGGTAAAACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 90 bp CAGTCTTTCCTCTTGAACTTGCTAATCCGGTTCTCACTGTCTTCTTaGGGTGGCAGATCTTCAACTCTGGCACCCGATGAAGCTCTGCGT +
Preference number: 6 (lower is better)
Translates to: QSFLLNLLIRFSLSS*GGRSSTLAPDEALR
Trigger: ACGCAGAGCTTCATCGGGTGCCAGAGTTGAAGATCTGCCACCCAAAGAAGACAGTGAGAACCGGATTAGCAAGTTCAAGAGGAAAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp TCTGAAAGCTGTCCTTCGTGCTGTCTTTGCTGGGTGTaGAGACGGATGGGTTTTTGGACGCTTGGAGTTCTT +
Preference number: 6 (lower is better)
Translates to: SESCPSCCLCWV*RRMGFWTLGVL
Trigger: AAGAACTCCAAGCGTCCAAAAACCCATCCGTCTTCACACCCAGCAAAGACAGCACGAAGGACAGCTTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp GTACCTTGGAGAGTTTCACGTGTGCCAAGGTGGCGCTaGAGTGCTTATAAATGTAGGTTTCGAGGACAGGGT +
Preference number: 6 (lower is better)
Translates to: VPWRVSRVPRWR*SAYKCRFRGQG
Trigger: ACCCTGTCCTCGAAACCTACATTTATAAGCACTTCAGCGCCACCTTGGCACACGTGAAACTCTCCAAGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp TGGTCCATGAAGCTCTTGGTGAGAACCTCAGCAAACTaGTTGATGGCACGGAGGAAAACTCTGTTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: WSMKLLVRTSAN*LMARRKTLFWV
Trigger: GACCCAGAACAGAGTTTTCCTCCGTGCCATCAATCAGTTTGCTGAGGTTCTCACCAAGAGCTTCATGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp TTTTACCGTGAAGCACTGCAGGTACTGCTTTGGGGATaGCTTGATGTCTTCTCCTGGTGGTGTGGTACTGGT +
Preference number: 6 (lower is better)
Translates to: FYREALQVLLWG*LDVFSWWCGTG
Trigger: ACCAGTACCACACCACCAGGAGAAGACATCAAGTCATCCCCAAAGCAGTACCTGCAGTGCTTCACGGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp GTCGCCGATCTGCAAGGAGAGCTCCACATCTTGAGATaGATTGTAGTTGTAGATGGCAACCCCATACTTCTG +
Preference number: 6 (lower is better)
Translates to: VADLQGELHILR*IVVVDGNPILL
Trigger: CAGAAGTATGGGGTTGCCATCTACAACTACAATGCATCTCAAGATGTGGAGCTCTCCTTGCAGATCGGCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp TGGGAACGCCACTCGATCAGACTGTATGTCATTTGCTaGAGCTGGCGGAATAGTGTGACCTTGTTGTTCACA +
Preference number: 6 (lower is better)
Translates to: WERHSIRLYVIC*SWRNSVTLLFT
Trigger: TGTGAACAACAAGGTCACACTATTCCGCCAGCTGCAGCAAATGACATACAGTCTGATCGAGTGGCGTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp ATCTGGGAACGCCACTCGATCAGACTGTATGTCATTTaGTGCAGCTGGCGGAATAGTGTGACCTTGTTGTTC +
Preference number: 6 (lower is better)
Translates to: IWERHSIRLYVI*CSWRNSVTLLF
Trigger: GAACAACAAGGTCACACTATTCCGCCAGCTGCAGCAAATGACATACAGTCTGATCGAGTGGCGTTCCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp CACATAGAGCCCATAGGTGTGGACAGTACTGAAGATTaGCTGGCCTCTCAAGTCCAGGTTCTGCAAAATGCT +
Preference number: 6 (lower is better)
Translates to: HIEPIGVDSTED*LASQVQVLQNA
Trigger: AGCATTTTGCAGAACCTGGACTTGAGAGGCCAGGCAATCTTCAGTACTGTCCACACCTATGGGCTCTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp ACCCAGCACCGGGATGAATGGCTTTCTCTAAAAGGTTaGCTTCCTCATCAAACACAGACATGGTCACCTCCA +
Preference number: 6 (lower is better)
Translates to: TQHRDEWLSLKG*LPHQTQTWSPP
Trigger: TGGAGGTGACCATGTCTGTGTTTGATGAGGAAGGCAACCTTTTAGAGAAAGCCATTCATCCCGGTGCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp CTCATCACAGGTTTTACCGTGAAGCACTGCAGGTACTaGTTTGGGGATGACTTGATGTCTTCTCCTGGTGGT +
Preference number: 6 (lower is better)
Translates to: LITGFTVKHCRY*FGDDLMSSPGG
Trigger: ACCACCAGGAGAAGACATCAAGTCATCCCCAAAGCAGTACCTGCAGTGCTTCACGGTAAAACCTGTGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp TTGCTGGGTGTGAAGACGGATGGGTTTTTGGACGCTTaGAGTTCTTTTTCTTCCAGCTCTGCTTTGGTCCCA +
Preference number: 6 (lower is better)
Translates to: LLGVKTDGFLDA*SSFSSSSALVP
Trigger: TGGGACCAAAGCAGAGCTGGAAGAAAAAGAACTCCAAGCGTCCAAAAACCCATCCGTCTTCACACCCAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp AAGGCAATCAGTCGCTTGAGCAGCTCCACCTTCTCCTaGTCCTCGGGATGCTCTTGTAAGTACTTTTCTGTA +
Preference number: 6 (lower is better)
Translates to: KAISRLSSSTFS*SSGCSCKYFSV
Trigger: TACAGAAAAGTACTTACAAGAGCATCCCGAGGACCAGGAGAAGGTGGAGCTGCTCAAGCGACTGATTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 72 bp TTGACAGCTTCTTCCAGAGGCCTGTCCATCAGCGTGTaGAAAGCAAGAAACAGCTGGCGGATTGAGTCGTTA +
Preference number: 6 (lower is better)
Translates to: LTASSRGLSISV*KARNSWRIESL
Trigger: TAACGACTCAATCCGCCAGCTGTTTCTTGCTTTCAACACGCTGATGGACAGGCCTCTGGAAGAAGCTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 72 bp AGCGTTATGACTCCATACAGCTTCTCTACTTTCTCCTaGAGTTCACGGAAGCACGAAGATAGCCGGGCATGC +
Preference number: 6 (lower is better)
Translates to: SVMTPYSFSTFS*SSRKHEDSRAC
Trigger: GCATGCCCGGCTATCTTCGTGCTTCCGTGAACTCAAGGAGAAAGTAGAGAAGCTGTATGGAGTCATAACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 90 bp CATGCAGTTAAGTTTCTGCCGCACCAACTGGTTGTCAGGGATGCTTaGAATGAACTTGCAGAAGAGCACGCTGAGCTCCATGGGATCAAA +
Preference number: 6 (lower is better)
Translates to: HAVKFLPHQLVVRDA*NELAEEHAELHGIK
Trigger: TTTGATCCCATGGAGCTCAGCGTGCTCTTCTGCAAGTTCATTCAAAGCATCCCTGACAACCAGTTGGTGCGGCAGAAACTTAACTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp GCTCCGCATCCTCCCCAATGTTACAGACAAAGTTCTTaGAGTTCACATAGAGCCCATAGGTGTGGACAGTAC +
Preference number: 6 (lower is better)
Translates to: APHPPQCYRQSS*SSHRAHRCGQY
Trigger: GTACTGTCCACACCTATGGGCTCTATGTGAACTTCAAGAACTTTGTCTGTAACATTGGGGAGGATGCGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp TGTCCACCAGGTGTGAAAAGTTCTTCTGCACCTGTGTaGGGTCACCTGGCAGTAACTTTAAGGACACCCAAA +
Preference number: 6 (lower is better)
Translates to: CPPGVKSSSAPV*GHLAVTLRTPK
Trigger: TTTGGGTGTCCTTAAAGTTACTGCCAGGTGACCTCACACAGGTGCAGAAGAACTTTTCACACCTGGTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS GCA 72 bp GCTGTTGATCTGTCCACCAGGTGTGAAAAGTTCTTCTaGACCTGTGTGAGGTCACCTGGCAGTAACTTTAAG +
Preference number: 6 (lower is better)
Translates to: AVDLSTRCEKFF*TCVRSPGSNFK
Trigger: CTTAAAGTTACTGCCAGGTGACCTCACACAGGTGCAGAAGAACTTTTCACACCTGGTGGACAGATCAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp ATTTTGTTGCGCTTGGCTTCTGAGAAGGTTTCAAGCTaGAGGGACTCGTGGGTGAGAAAAGCTACAGCCAAA +
Preference number: 6 (lower is better)
Translates to: ILLRLASEKVSS*RDSWVRKATAK
Trigger: TTTGGCTGTAGCTTTTCTCACCCACGAGTCCCTCCAGCTTGAAACCTTCTCAGAAGCCAAGCGCAACAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 72 bp CTCTTGAACTTGCTAATCCGGTTCTCACTGTCTTCTTaGGGTGGCAGATCTTCAACTCTGGCACCCGATGAA +
Preference number: 6 (lower is better)
Translates to: LLNLLIRFSLSS*GGRSSTLAPDE
Trigger: TTCATCGGGTGCCAGAGTTGAAGATCTGCCACCCAAAGAAGACAGTGAGAACCGGATTAGCAAGTTCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 90 bp CCCTTGATCTTGACAGCTTCTTCCAGAGGCCTGTCCATCAGCGTGTaGAAAGCAAGAAACAGCTGGCGGATTGAGTCGTTAAATTCATCT +
Preference number: 6 (lower is better)
Translates to: PLILTASSRGLSISV*KARNSWRIESLNSS
Trigger: AGATGAATTTAACGACTCAATCCGCCAGCTGTTTCTTGCTTTCAACACGCTGATGGACAGGCCTCTGGAAGAAGCTGTCAAGATCAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp GGCCTGTCCATCAGCGTGTTGAAAGCAAGAAACAGCTaGCGGATTGAGTCGTTAAATTCATCTCCATCTTCA +
Preference number: 6 (lower is better)
Translates to: GLSISVLKARNS*RIESLNSSPSS
Trigger: TGAAGATGGAGATGAATTTAACGACTCAATCCGCCAGCTGTTTCTTGCTTTCAACACGCTGATGGACAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 72 bp ACAGTGCTGGTCTCATCTGGATCTAAAATGTTTCCATaGTCGTCCCGCACAACCAGATCCAGTCCAAGCATT +
Preference number: 6 (lower is better)
Translates to: TVLVSSGSKMFP*SSRTTRSSPSI
Trigger: AATGCTTGGACTGGATCTGGTTGTGCGGGACGACAATGGAAACATTTTAGATCCAGATGAGACCAGCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 72 bp TTCTCCAAAGGGCTGATTTCTTCTACTGAAATCTCCTaGGCTTCGAACCACTTGAGGATCCCAGGGAAGGTA +
Preference number: 6 (lower is better)
Translates to: FSKGLISSTEIS*ASNHLRIPGKV
Trigger: TACCTTCCCTGGGATCCTCAAGTGGTTCGAAGCCAAGGAGATTTCAGTAGAAGAAATCAGCCCTTTGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 90 bp CTCATCACATCAGGTTCTGGAGCCTTCTCTGCAATGACTTGTGATTaGCTCAGATTCCAGTCTTTCCTCTTGAACTTGCTAATCCGGTTC +
Preference number: 6 (lower is better)
Translates to: LITSGSGAFSAMTCD*LRFQSFLLNLLIRF
Trigger: GAACCGGATTAGCAAGTTCAAGAGGAAAGACTGGAATCTGAGCAAATCACAAGTCATTGCAGAGAAGGCTCCAGAACCTGATGTGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp CATCAGCGTGTTGAAAGCAAGAAACAGCTGGCGGATTaGGTCGTTAAATTCATCTCCATCTTCACTCTGACC +
Preference number: 6 (lower is better)
Translates to: HQRVESKKQLAD*VVKFISIFTLT
Trigger: GGTCAGAGTGAAGATGGAGATGAATTTAACGACTCAATCCGCCAGCTGTTTCTTGCTTTCAACACGCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp TATGTCTCAGGAAAAATGCCCTTTTTAGATCTGTTCTaGAGCGCGTATCCTCTGTACCAGCCCTCATACATC +
Preference number: 6 (lower is better)
Translates to: YVSGKMPFLDLF*SAYPLYQPSYI
Trigger: GATGTATGAGGGCTGGTACAGAGGATACGCGCTCCAGAACAGATCTAAAAAGGGCATTTTTCCTGAGACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 72 bp TGTGATTTGCTCAGATTCCAGTCTTTCCTCTTGAACTaGCTAATCCGGTTCTCACTGTCTTCTTTGGGTGGC +
Preference number: 6 (lower is better)
Translates to: CDLLRFQSFLLN*LIRFSLSSLGG
Trigger: GCCACCCAAAGAAGACAGTGAGAACCGGATTAGCAAGTTCAAGAGGAAAGACTGGAATCTGAGCAAATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CCA 72 bp TATAGGCCGTTCTGTACGTGGTTCTTTCAATCCACATaGTGGCAAACTCATTTTCTGGGTCTTTTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: YRPFCTWFFQST*WQTHFLGLFLL
Trigger: AAGGAGAAAAAGACCCAGAAAATGAGTTTGCCACCATGTGGATTGAAAGAACCACGTACAGAACGGCCTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS TCA 72 bp AGTAACTTTAAGGACACCCAAAGACCTTGTCCTTTGTaGTTCACTTCCTTTGCAGCTATGACTTTATTTAGG +
Preference number: 6 (lower is better)
Translates to: SNFKDTQRPCPL*FTSFAAMTLFR
Trigger: CCTAAATAAAGTCATAGCTGCAAAGGAAGTGAATCACAAAGGACAAGGTCTTTGGGTGTCCTTAAAGTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 90 bp ATGATGAAGACCAGAGCGTCAAACACAAGGAAGTCATATGTTTCATaGTCTGACATTTCCATCATTATGTTAAAAAGTGCGTCTAGTGTG +
Preference number: 6 (lower is better)
Translates to: MMKTRASNTRKSYVS*SDISIIMLKSASSV
Trigger: CACACTAGACGCACTTTTTAACATAATGATGGAAATGTCAGACAATGAAACATATGACTTCCTTGTGTTTGACGCTCTGGTCTTCATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 72 bp ACCAGAGCGTCAAACACAAGGAAGTCATATGTTTCATaGTCTGACATTTCCATCATTATGTTAAAAAGTGCG +
Preference number: 6 (lower is better)
Translates to: TRASNTRKSYVS*SDISIIMLKSA
Trigger: CGCACTTTTTAACATAATGATGGAAATGTCAGACAATGAAACATATGACTTCCTTGTGTTTGACGCTCTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 90 bp GGCTTTCTCCCACATTTTGCCTTTATCAAAATAGGATATGATCTCTaGATACAGTTTCTCTTTAAGCTCCTGCTGGGTATAAACATAGTA +
Preference number: 6 (lower is better)
Translates to: GFLPHFAFIKIGYDL*IQFLFKLLLGINIV
Trigger: TACTATGTTTATACCCAGCAGGAGCTTAAAGAGAAACTGTATCAAGAGATCATATCCTATTTTGATAAAGGCAAAATGTGGGAGAAAGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6
CDS CAA 72 bp CCACATTTTGCCTTTATCAAAATAGGATATGATCTCTaGATACAGTTTCTCTTTAAGCTCCTGCTGGGTATA +
Preference number: 6 (lower is better)
Translates to: PHFAFIKIGYDL*IQFLFKLLLGI
Trigger: TATACCCAGCAGGAGCTTAAAGAGAAACTGTATCAAGAGATCATATCCTATTTTGATAAAGGCAAAATGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039135.6