RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DOCK4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035954

Ensembl transcript IDs: ENSMUST00000037488.8, ENSMUST00000220912.2

Found 493 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAAGCGAGCAGAGACACTCAGCTCTCCTGGGAAGAAGGGAGAGTTTaGAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCA +
Preference number: 1 (lower is better)
Translates to: QASRDTQLSWEEGRV*RILYFMQDSKLMPS
Trigger: TGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTCCCTTCTTCCCAGGAGAGCTGAGTGTCTCTGCTCGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
3UTR-3UTR CCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGCTTAATCTAGCTGATTaGAACTCCGAAAGCAAATTG +
Preference number: 2 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLLNLAD*NSESKL
Trigger: CAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAG...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
3UTR CAA 90 bp ACAAGCGAGCAGAGACACTCAGCTCTCCTGGGAAGAAGGGAGAGTTaGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTC +
Preference number: 2 (lower is better)
Translates to: TSEQRHSALLGRRES*KNSLFYAGFKVNAL
Trigger: GAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTCCCTTCTTCCCAGGAGAGCTGAGTGTCTCTGCTCGCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
3UTR-3UTR TCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTCTTCACCTTCTTTCCTaGAGTCTCAAGAAATGGCCG +
Preference number: 2 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCLHLLS*SLKKWP
Trigger: CGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAG...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
3UTR-3UTR TCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCGCTCAAGGGGAGAGCTaGGGTCTTCACCTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTAQGES*GLHLLS
Trigger: GGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGC...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
3UTR CAA 90 bp AGTAAGGAAGCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTaGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTT +
Preference number: 2 (lower is better)
Translates to: SKEAQNSSKHFSWGL*LNLADWNSESKLHL
Trigger: AAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGCTTCCTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
3UTR-3UTR GCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATCACCTAATGCTATGCTaGTGTATCCATGCTAGAATG +
Preference number: 2 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHHLMLC*CIHARM
Trigger: CATTCTAGCATGGATACAGCAGCATAGCATTAGGTG...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
3UTR-3UTR GCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTTATCACGCATTCTATTaGTTGACAATATCGTATTGG +
Preference number: 2 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCYHAFY*LTISYW
Trigger: CCAATACGATATTGTCAAGCAATAGAATGCGTGATA...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
3UTR-3UTR TCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCTGCCTATTTAAACCTTaGACACCTGCTCTTTATCAG +
Preference number: 2 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTCLFKP*TPALYQ
Trigger: CTGATAAAGAGCAGGTGTTCAAGGTTTAAATAGGCA...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
3UTR-3UTR GCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCTATCACGCATTCTATTaGTTGACAATATCGTATTGG +
Preference number: 2 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIYHAFY*LTISYW
Trigger: CCAATACGATATTGTCAAGCAATAGAATGCGTGATA...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
3UTR-3UTR CAA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGTTCTCCTGGGGTCTCTaGCTTAATCTAGCTGATTGG +
Preference number: 3 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLFSWGL*LNLADW
Trigger: CCAATCAGCTAGATTAAGCAAGAGACCCCAGGAGAA...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
3UTR GCA 72 bp CCATCATGTCTACTCTACCTCCACCTAATGCTATGCTaGTGTATCCATGCTAGAATGGTCCACAATCCTCTT +
Preference number: 3 (lower is better)
Translates to: PSCLLYLHLMLC*CIHARMVHNPL
Trigger: AAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATAGCATTAGGTGGAGGTAGAGTAGACATGATGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
3UTR GCA 72 bp CCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTaGCCAGACATGATCAGCTTTCTCAGAGTATCAAGT +
Preference number: 3 (lower is better)
Translates to: PEVSRNGRCVSM*PDMISFLRVSS
Trigger: ACTTGATACTCTGAGAAAGCTGATCATGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
3UTR TCA 72 bp CAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACATaGTCAGCTTTCTCAGAGTATCAAGTATTCAGAATA +
Preference number: 3 (lower is better)
Translates to: QEMAVVLVCAQT*SAFSEYQVFRI
Trigger: TATTCTGAATACTTGATACTCTGAGAAAGCTGATCATGTCTGGGCACATACTAACACAACGGCCATTTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
3UTR GCA 72 bp TTGAAAAGTAATGCAGTAGATAGCATGGTGTCAGGATaGTTAAAGATTCAGCAACCGTTCACAAAGCAGAGT +
Preference number: 3 (lower is better)
Translates to: LKSNAVDSMVSG*LKIQQPFTKQS
Trigger: ACTCTGCTTTGTGAACGGTTGCTGAATCTTTAAGCATCCTGACACCATGCTATCTACTGCATTACTTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGCCACTGGAGATGGGGTaGAGGACTGTACGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLPLEMG*RTVRSP
Trigger: AGGGCTCCGTACAGTCCTTCACCCCATCTCCAGTGG...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTGGCTGGTTGGCATGCTaGATGGCGATGGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSAGWLAC*MAMAWG
Trigger: CCCCCATGCCATCGCCATGCAGCATGCCAACCAGCC...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGGGGATGGAGAGGCTGTaGGGTAGCGGGACAGGGCGC +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRGMERL*GSGTGR
Trigger: GCGCCCTGTCCCGCTACCTCACAGCCTCTCCATCCC...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGCCTCGGTCGAAGTTCTaGATGATGGTGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLPRSKF*MMVRCR
Trigger: CCTGCACCTCACCATCATCCAGAACTTCGACCGAGG...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTGTGACATCCTGGAACTaGAGCCTCATGGCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSAVTSWN*SLMAEL
Trigger: CAGCTCCGCCATGAGGCTGCAGTTCCAGGATGTCAC...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGGGTACAAACTTCTCGTaGACGGCCAGCCCAAATTCC +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLGTNFS*TASPNS
Trigger: GGAATTTGGGCTGGCCGTGCACGAGAAGTTTGTACC...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGGTACTCCACTGGAGATaGGGTGAAGGACTGTACGGA +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLVLHWR*GEGLYG
Trigger: TCCGTACAGTCCTTCACCCCATCTCCAGTGGAGTAC...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGCATTCTCCAGGTGGCTaGACCGCGCAGCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMHSPGG*TAQPRA
Trigger: AGCCCTTGGCTGCGCGGTCCAGCCACCTGGAGAATG...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTTCGTCTGACACTGGCTaGTCAGGGTCTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSASSDTG*SGSSAA
Trigger: AGCAGCTGAAGACCCTGATCAGCCAGTGTCAGACGA...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGACATGGTCAAGGGGTTaGTATTCTGCATCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLTWSRG*YSASAS
Trigger: CGAGGCAGATGCAGAATATCAACCCCTTGACCATGT...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCATGGAAGCAGGGGCTaGGTTTCTACACACACGAGG +
Preference number: 4 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSAHGSRG*VSTHTR
Trigger: CCTCGTGTGTGTAGAAACTCAGCCCCTGCTTCCATG...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGGTTCCTCCGACCCGCTaGAGCTGGGCACGGGCACCG +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKVPPTR*SWARAP
Trigger: CGGTGCCCGTGCCCAGCTTCAGCGGGTCGGAGGAAC...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTGCGAGGAAATCCCACTaGTGTAGCTGCCGGACAAGA +
Preference number: 4 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSAARKSH*CSCRTR
Trigger: TCTTGTCCGGCAGCTACAGCAGTGGGATTTCCTCGC...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTGTCATGGGTGAGATaGCCAACTAGCACCTGCCGT +
Preference number: 4 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSALSWVR*PTSTCR
Trigger: ACGGCAGGTGCTAGTTGGCCATCTCACCCATGACAG...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGTCCTTCATCCTGTCATaGGTGAGATGGCCAACTAGC +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLSFILS*VRWPTS
Trigger: GCTAGTTGGCCATCTCACCCATGACAGGATGAAGGA...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGATGGTCTCGTCGGGCTaGTTGGCATGCTGCATGGCG +
Preference number: 4 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMMVSSG*LACCMA
Trigger: CGCCATGCAGCATGCCAACCAGCCCGACGAGACCAT...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTAGGGGGACACTGATGTaGTGTGTCTTGCTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSARGTLM*CVLLAK
Trigger: CTTCGCCAGCAAGACACACCACATCAGTGTCCCCCT...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGTGGACAAAGAGGTGGTaGCTGCTGGCCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRWTKRW*LLACTG
Trigger: CCCTGTGCAGGCCAGCAGTCACCACCTCTTTGTCCA...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGCCACCCAGAGACTCTTaGATTCGTTCTCCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLPPRDS*IRSPCL
Trigger: AAGACAAGGAGAACGAATTCAAGAGTCTCTGGGTGG...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATGGGATGGAGAGGCTGTaGGGTAGCGGGACAGGGCGC +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADGMERL*GSGTGR
Trigger: GCGCCCTGTCCCGCTACCTCACAGCCTCTCCATCCC...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGATCTCTGTATGCAAGTaGCCCAGCAAAGTGACTCTC +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLISVCK*PSKVTL
Trigger: GAGAGTCACTTTGCTGGGGCACTTGCATACAGAGAT...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGGAAGTTCTTACGGAGTaGATCGGAGAGGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLEVLTE*IGEVQN
Trigger: GTTCTGTACCTCTCCGATGCACTCCGTAAGAACTTC...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCGGCTGGTTGGCATGCTaGATGGCGATGGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCAGWLAC*MAMAWG
Trigger: CCCCCATGCCATCGCCATGCAGCATGCCAACCAGCC...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACGGGACCCCCTCTCTCTaGAGTACCTCCTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDGTPSL*STSWLS
Trigger: AGAGAGCCAGGAGGTACTGCAGAGAGAGGGGGTCCC...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACCTGCCCAGGGTGTCCTaGACCAAGTTGGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDLPRVS*TKLATS
Trigger: GGAAGTGGCCAACTTGGTCCAGGACACCCTGGGCAG...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGATGGTCTCGTCGGGCTaGTTGGCATGCTGCATGGCG +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRMVSSG*LACCMA
Trigger: CGCCATGCAGCATGCCAACCAGCCCGACGAGACCAT...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACACCTCTGCCTGGAAGATaGTCTCGTCGGGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTPLPGR*SRRAGW
Trigger: CCAACCAGCCCGACGAGACCATCTTCCAGGCAGAGG...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGAGGCTCCACGGGTGTTaGGTAAATGGCACTGCACGG +
Preference number: 4 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMRLHGC*VNGTAR
Trigger: CCGTGCAGTGCCATTTACCCAACACCCGTGGAGCCT...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGCATTCTCCAGGTGGCTaGACCGCGCAGCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMHSPGG*TAQPRA
Trigger: AGCCCTTGGCTGCGCGGTCCAGCCACCTGGAGAATG...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGAGGTCAGGAACTCCCTaGGGGGCCGATCAGACCACT +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMRSGTP*GADQTT
Trigger: AGTGGTCTGATCGGCCCCTCAGGGAGTTCCTGACCT...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGAGGCGAGGGGGACACTaGTGTGGTGTGTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMRRGGH*CGVSCW
Trigger: CCAGCAAGACACACCACATCAGTGTCCCCCTCGCCT...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAGTTCCTCCGACCCGCTaGAGCTGGGCACGGGCACCG +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVVPPTR*SWARAP
Trigger: CGGTGCCCGTGCCCAGCTTCAGCGGGTCGGAGGAAC...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACTGGATGATGGTGAGGTaGAGGTGCTCCTTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDWMMVR*RCSLRC
Trigger: GCAGCGCAAGGAGCACCTGCACCTCACCATCATCCA...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGTGGATGATGGTGAGGTaGAGGTGCTCCTTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRWMMVR*RCSLRC
Trigger: GCAGCGCAAGGAGCACCTGCACCTCACCATCATCCA...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGCACGAGGGCTTCCATTaGGAAAATGGACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMHEGFH*ENGQGW
Trigger: CCAGCCCTGTCCATTTTCCCAATGGAAGCCCTCGTG...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGCACTTCTCCAGGATCTaGACAGTGTCTCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMHFSRI*TVSPIS
Trigger: GGAGATCGGAGACACTGTTCAGATCCTGGAGAAGTG...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGCCCTTTGCTCTCTTGTaGGAGGAAGAAGCGGACGGA +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRPFALL*EEEADG
Trigger: TCCGTCCGCTTCTTCCTCTCACAAGAGAGCAAAGGG...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGTATATCTGTAAATACTaGGCCTCTGCCTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLYICKY*ASAWKM
Trigger: CATCTTCCAGGCAGAGGCTCAGTATTTACAGATATA...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCGTGACATCCTGGAACTaGAGCCTCATGGCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCAVTSWN*SLMAEL
Trigger: CAGCTCCGCCATGAGGCTGCAGTTCCAGGATGTCAC...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGGTCTTTGACAAAGAATaGCTCTTGATACCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLVFDKE*LLIPGD
Trigger: GTCTCCAGGTATCAAGAGGCATTCTTTGTCAAAGAC...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGAAATTCCAGAATCTGTaGCTGCTCAAGCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLKFQNL*LLKHQF
Trigger: GAACTGATGCTTGAGCAGGCACAGATTCTGGAATTT...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACGTACTCACTAGCCGGTaGCTCTCCAGAGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDVLTSR*LSRAKG
Trigger: TCCTTTGGCTCTGGAGAGCCACCGGCTAGTGAGTAC...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCGCCATTCGGTCTGCATaGGGTAGGTCAGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCAAIRSA*GRSGTP
Trigger: GGGAGTTCCTGACCTACCCCATGCAGACCGAATGGC...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGAGGGTCTTCAGCTGCTaGTTCTTGTTTTCTAACACT +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLRVFSC*FLFSNT
Trigger: AGTGTTAGAAAACAAGAACCAGCAGCTGAAGACCCT...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGATGCCTCTTGATACCTaGAGACCCCACCGTTCACTG +
Preference number: 4 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMMPLDT*RPHRSL
Trigger: CAGTGAACGGTGGGGTCTCCAGGTATCAAGAGGCAT...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACTACCCTGGTACCATCTaGACTCATGGAAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDYPGTI*THGSRG
Trigger: GCCCCTGCTTCCATGAGTCCAGATGGTACCAGGGTA...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGCAGGTGCAGAAAGGTTaGGGTCACTTCGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRQVQKG*GHFEAR
Trigger: CCTTGCCTCGAAGTGACCCCAACCTTTCTGCACCTG...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTTGTCCGACATGTTCTTaGCTTCTTTCCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSACPTCS*LLSHCP
Trigger: TGGACAGTGGGAAAGAAGCCAAGAACATGTCGGACA...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037488.8
CDS-3UTR CCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTGTCCCATTCTCCAGGTaGCTGGACCGCGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCVPFSR*LDRAAK
Trigger: CTTGGCTGCGCGGTCCAGCCACCTGGAGAATGGGAC...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATTGGACAAAGAGGTGGTaGCTGCTGGCCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADWTKRW*LLACTG
Trigger: CCCTGTGCAGGCCAGCAGTCACCACCTCTTTGTCCA...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGAGCATATCACCATTTTaGGTGAGTTTTGTGGAACAG +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLSISPF*VSFVEQ
Trigger: CTGTTCCACAAAACTCACTCAAAATGGTGATATGCT...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGCAGCACAGACTTTTCTaGGCTATTTTTCTTGATGAG +
Preference number: 4 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLQHRLF*AIFLDE
Trigger: CTCATCAAGAAAAATAGCTCAGAAAAGTCTGTGCTG...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGAGGTCAGGAACTCCCTaGGGGGCCGATCAGACCACT +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKRSGTP*GADQTT
Trigger: AGTGGTCTGATCGGCCCCTCAGGGAGTTCCTGACCT...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTCCACTGGAGATGGGGTaGAGGACTGTACGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCPLEMG*RTVRSP
Trigger: AGGGCTCCGTACAGTCCTTCACCCCATCTCCAGTGG...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGCTCTGGGTCTACCATTaGGTACTCCTTCCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRLWVYH*VLLPRH
Trigger: GTGCCTAGGAAGGAGTACGCAATGGTAGACCCAGAG...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACACTCTGGGTCTACCATTaGGTACTCCTTCCTAGGCAC +
Preference number: 4 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTLWVYH*VLLPRH
Trigger: GTGCCTAGGAAGGAGTACGCAATGGTAGACCCAGAG...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACTGCAATGCTAAGGACTaGACAGCCAAAAGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDCNAKD*TAKRSP
Trigger: CGGCGACCTTTTGGCTGTGCAGTCCTTAGCATTGCA...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGAACACTTCCTGGATATaGTCCTGGCGCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRNTSWI*SWRSAS
Trigger: GGAAGCAGAGCGCCAGGAGCATATCCAGGAAGTGTT...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGACGTTTCATCACCTTTaGCCTCCGACATCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMTFHHL*PPTSGC
Trigger: ACAGCCTGATGTCGGAGGGCAAAGGTGATGAAACGT...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACAGGTACAAACTTCTCGTaGACGGCCAGCCCAAATTCC +
Preference number: 4 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTGTNFS*TASPNS
Trigger: GGAATTTGGGCTGGCCGTGCACGAGAAGTTTGTACC...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCGCGAGGAAATCCCACTaGTGTAGCTGCCGGACAAGA +
Preference number: 4 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCAARKSH*CSCRTR
Trigger: TCTTGTCCGGCAGCTACAGCAGTGGGATTTCCTCGC...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGCTGTCATGGGTGAGATaGCCAACTAGCACCTGCCGT +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMLSWVR*PTSTCR
Trigger: ACGGCAGGTGCTAGTTGGCCATCTCACCCATGACAG...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGTCCTGGATATGCTCCTaGCGCTCTGCTTCCGTTATC +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRSWICS*RSASVI
Trigger: GATAACGGAAGCAGAGCGCCAGGAGCATATCCAGGA...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACATGTCCTGGACCAAGTTaGCCACTTCCCGGACATCAA +
Preference number: 4 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTCPGPS*PLPGHQ
Trigger: TTGATGTCCGGGAAGTGGCCAACTTGGTCCAGGACA...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGCTGCCCAGGGTGTCCTaGACCAAGTTGGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKLPRVS*TKLATS
Trigger: GGAAGTGGCCAACTTGGTCCAGGACACCCTGGGCAG...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGCCTCGGTCGAAGTTCTaGATGATGGTGAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMPRSKF*MMVRCR
Trigger: CCTGCACCTCACCATCATCCAGAACTTCGACCGAGG...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATTCTCGTCGGGCTGGTTaGCATGCTGCATGGCGATGG +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADSRRAG*HAAWRW
Trigger: CCATCGCCATGCAGCATGCCAACCAGCCCGACGAGA...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACCGAGGATTTCATTCATaGTGTGCCACAGGCGATGGA +
Preference number: 4 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDRGFHS*CATGDG
Trigger: TCCATCGCCTGTGGCACATCATGAATGAAATCCTCG...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGAAGTTTCAGCAGCTCTaGCCACCTGGGACTGTTGTT +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRKFQQL*PPGTVV
Trigger: AACAACAGTCCCAGGTGGTCAGAGCTGCTGAAACTT...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCGGCGCTGCTGGTCCATaGTTTTGTCATACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCAGAAGP*FCHTRR
Trigger: CCTCCTTGTATGACAAAATCATGGACCAGCAGCGCC...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGTTAAACAGCATCCTCTaGGAAGGCTCCACGGGTGTT +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRLNSIL*EGSTGV
Trigger: AACACCCGTGGAGCCTTCTCAGAGGATGCTGTTTAA...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTATTCTTTTTCTCTCCTaGTCCCATTCGACCAATTCG +
Preference number: 4 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSAILFLS*SHSTNS
Trigger: CGAATTGGTCGAATGGGAGCAGGAGAGAAAAAGAAT...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCTGCAATGCTAAGGACTaGACAGCCAAAAGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCACNAKD*TAKRSP
Trigger: CGGCGACCTTTTGGCTGTGCAGTCCTTAGCATTGCA...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGAATTCCTCTTCATTCTaGCCTCCGGTGGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRNSSSF*PPVARE
Trigger: TTCCCTTGCCACCGGAGGGCAGAATGAAGAGGAATT...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGGTGCAGGTGCTCCTTaGGCTGCCATTCGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHGAGAP*AAIRSA
Trigger: TGCAGACCGAATGGCAGCGCAAGGAGCACCTGCACC...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGGGACCCCCTCTCTCTaGAGTACCTCCTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHGTPSL*STSWLS
Trigger: AGAGAGCCAGGAGGTACTGCAGAGAGAGGGGGTCCC...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACAGTCGGGCAGTAATGTaGCGCTTCACATCCTTCATC +
Preference number: 4 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDSRAVM*RFTSFI
Trigger: GATGAAGGATGTGAAGCGCCACATTACTGCCCGACT...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACAAGTCGGGCAGTAATGTaGCGCTTCACATCCTTCATC +
Preference number: 4 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTSRAVM*RFTSFI
Trigger: GATGAAGGATGTGAAGCGCCACATTACTGCCCGACT...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACAGATGCTGATGTCCTCTaGGTCTACCATTGCGTACTC +
Preference number: 4 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTDADVL*VYHCVL
Trigger: GAGTACGCAATGGTAGACCCAGAGGACATCAGCATC...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGAGAGGTGGTGACTGCTaGCCTGCACAGGGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKRGGDC*PAQGCL
Trigger: AAGACACCCCTGTGCAGGCCAGCAGTCACCACCTCT...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATAGAGGTGGTGACTGCTaGCCTGCACAGGGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADRGGDC*PAQGCL
Trigger: AAGACACCCCTGTGCAGGCCAGCAGTCACCACCTCT...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTCCTGGATATGCTCCTaGCGCTCTGCTTCCGTTATC +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMSWICS*RSASVI
Trigger: GATAACGGAAGCAGAGCGCCAGGAGCATATCCAGGA...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACATTCCGGAGATCTGGCTaGGGTATCAAGGTTACTTCC +
Preference number: 4 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTFRRSG*GIKVTS
Trigger: GGAAGTAACCTTGATACCCCAGCCAGATCTCCGGAA...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACAGACATTCCGGAGATCTaGCTGGGGTATCAAGGTTAC +
Preference number: 4 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTDIPEI*LGYQGY
Trigger: GTAACCTTGATACCCCAGCCAGATCTCCGGAATGTC...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCTGCATGGCGATGGCATaGGGGAACTCGTTCAGCATT +
Preference number: 4 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCACMAMA*GNSFSI
Trigger: AATGCTGAACGAGTTCCCCCATGCCATCGCCATGCA...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGGCTTTTGATGTTGTCTaGGACCCCCTCTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMAFDVV*DPLSLQ
Trigger: CTGCAGAGAGAGGGGGTCCCAGACAACATCAAAAGC...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGATGCCGGGTAAGCTCTaGACCAAGTACAGCGATGTC +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMMPGKL*TKYSDV
Trigger: GACATCGCTGTACTTGGTCCAGAGCTTACCCGGCAT...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGTACCATCTGGACTCATaGAAGCAGGGGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRYHLDS*KQGLSF
Trigger: GAAACTCAGCCCCTGCTTCCATGAGTCCAGATGGTA...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCAAAGGTCGCCGGTACTaGACACTGCAGGCATTCTTT +
Preference number: 4 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCAKGRRY*TLQAFF
Trigger: AAAGAATGCCTGCAGTGTTCAGTACCGGCGACCTTT...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGAAAGGTCGCCGGTACTaGACACTGCAGGCATTCTTT +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMKGRRY*TLQAFF
Trigger: AAAGAATGCCTGCAGTGTTCAGTACCGGCGACCTTT...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTCCCTTTGCTCTCTTGTaGGAGGAAGAAGCGGACGGA +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCPFALL*EEEADG
Trigger: TCCGTCCGCTTCTTCCTCTCACAAGAGAGCAAAGGG...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTAAGTGGATGTGGAGGTaGTGCAGTACGACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCKWMWR*CSTTGR
Trigger: CCTGCCTGTCGTACTGCATCACCTCCACATCCACTT...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCTCTCCAATATGGTCCTaGGCAGGATATCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCASPIWS*AGYPAS
Trigger: GCTTGCTGGATATCCTGCTCAGGACCATATTGGAGA...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACAGGGGTCTCATATCTTaGGGTACAAACTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDRGLIS*GTNFSC
Trigger: GCACGAGAAGTTTGTACCTCAAGATATGAGACCCCT...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGCATGGAAGCAGGGGCTaGGTTTCTACACACACGAGG +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKHGSRG*VSTHTR
Trigger: CCTCGTGTGTGTAGAAACTCAGCCCCTGCTTCCATG...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACAACTGGTCACATTAGGTaGAGCAGAGTGAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTTGHIR*SRVSGT
Trigger: AGTTCCACTCACTCTGCTTCACCTAATGTGACCAGT...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAAGGCGAGGGGGACACTaGTGTGGTGTGTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVRRGGH*CGVSCW
Trigger: CCAGCAAGACACACCACATCAGTGTCCCCCTCGCCT...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACGCCGGTACTGAACACTaGAGGCATTCTTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDAGTEH*RHSFSL
Trigger: GAGAGAAAAAGAATGCCTGCAGTGTTCAGTACCGGC...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGAAGCTCCAGTCCCTTTaGTCTCTTGTGAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRKLQSL*SLVRGR
Trigger: TCTTCCTCTCACAAGAGAGCAAAGGGACTGGAGCTT...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGGCACTGAAGCTTAATTaGCTGCAGAGAATCGTCCAC +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRALKLN*LQRIVH
Trigger: GTGGACGATTCTCTGCAGGCAATTAAGCTTCAGTGC...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGACGTTTCATCACCTTTaGCCTCCGACATCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMTFHHL*PPTSGC
Trigger: ACAGCCTGATGTCGGAGGGCAAAGGTGATGAAACGT...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCAGCCTCTGTGAAGTTCTaGGCCTTGAGATGCAGATCG +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSASVKF*ALRCRS
Trigger: CGATCTGCATCTCAAGGCGCAGAACTTCACAGAGGC...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATATGGTGAGGTGCAGGTaGTCCTTGCGCTGCCATTCG +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHMVRCR*SLRCHS
Trigger: CGAATGGCAGCGCAAGGAGCACCTGCACCTCACCAT...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTTGGGTAAATGGCACTaGACGGTCTATCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMLGKWH*TVYLLG
Trigger: CCCCAAGAGATAGACCGTGCAGTGCCATTTACCCAA...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATTCCCACTGCTGTAGCTaGCGGACAAGACTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADSHCCS*RTRLGN
Trigger: ATTCCCCAGTCTTGTCCGGCAGCTACAGCAGTGGGA...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGGGGTTTTGCTCTCCTTaGGTACAGGTTCCTCCGACC +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKGFCSP*VQVPPT
Trigger: GGTCGGAGGAACCTGTACGCAAGGAGAGCAAAACCC...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTCCTTCATCCTGTCATaGGTGAGATGGCCAACTAGC +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMSFILS*VRWPTS
Trigger: GCTAGTTGGCCATCTCACCCATGACAGGATGAAGGA...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGGCTTATCCGGGGCTTTaGGAAGCCCATTTCTATTCA +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRAYPGL*EAHFYS
Trigger: TGAATAGAAATGGGCTTCCCAAAGCCCCGGATAAGC...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGATGTTCTCGTGGATCTaGTACCACTCGCTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRMFSWI*YHSLSV
Trigger: TACAGAGAGCGAGTGGTACCAGATCCACGAGAACAT...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGGATGACCTTGGAAAATaGGAGCTTGAGGTAGCGGGT +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMDDLGK*ELEVAG
Trigger: ACCCGCTACCTCAAGCTCCCATTTTCCAAGGTCATC...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTCATTCTGCCCTCCGGTaGCAAGGGAAAACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCHSALR*QGKTAF
Trigger: GAAGGCTGTTTTCCCTTGCCACCGGAGGGCAGAATG...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCGGTTCCAGGCGCTGCTaGTCCATGATTTTGTCATAC +
Preference number: 4 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCAGSRRC*SMILSY
Trigger: GTATGACAAAATCATGGACCAGCAGCGCCTGGAACC...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGGGTTCCAGGCGCTGCTaGTCCATGATTTTGTCATAC +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMGSRRC*SMILSY
Trigger: GTATGACAAAATCATGGACCAGCAGCGCCTGGAACC...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGGTTGGCATGCTGCATaGCGATGGCATGGGGGAACT +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHGWHAA*RWHGGT
Trigger: AGTTCCCCCATGCCATCGCCATGCAGCATGCCAACC...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACACCTGGCTCTCTGGAATaGGAGTCACAGCATATATCT +
Preference number: 4 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTPGSLE*ESQHIS
Trigger: AGATATATGCTGTGACTCCCATTCCAGAGAGCCAGG...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCAATGCCTCTTGATACCTaGAGACCCCACCGTTCACTG +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSMPLDT*RPHRSL
Trigger: CAGTGAACGGTGGGGTCTCCAGGTATCAAGAGGCAT...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGCTTCCATTGGGAAAATaGACAGGGCTGGCCTGGATA +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMLPLGK*TGLAWI
Trigger: TATCCAGGCCAGCCCTGTCCATTTTCCCAATGGAAG...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATCACGAGGGCTTCCATTaGGAAAATGGACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADHEGFH*ENGQGW
Trigger: CCAGCCCTGTCCATTTTCCCAATGGAAGCCCTCGTG...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTGGCAAGAGTTTTCTCTaGAATGTTTGTGTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSAGKSFL*NVCVCQ
Trigger: CTGACAAACACAAACATTCCAGAGAAAACTCTTGCC...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCGTCCCATTCTCCAGGTaGCTGGACCGCGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIVPFSR*LDRAAK
Trigger: CTTGGCTGCGCGGTCCAGCCACCTGGAGAATGGGAC...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCTGTAGATGTCCTTCCTaGGTTCACTGCTACCCAAGT +
Preference number: 4 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCACRCPS*VHCYPS
Trigger: ACTTGGGTAGCAGTGAACTCAGGAAGGACATCTACA...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGGTTATGGACACTCCGTaGGAGAACACTGAGGAGTAT +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMVMDTP*ENTEEY
Trigger: ATACTCCTCAGTGTTCTCTCACGGAGTGTCCATAAC...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTCACACTTATGCACGATaGGCTCGTGTGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCHTYAR*ARVCHL
Trigger: CAGATGGCACACACGAGCTCATCGTGCATAAGTGTG...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTTGTGGAACAGAGAAATaGTGTTATCCAAAAGGATTC +
Preference number: 4 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSACGTEK*CYPKGF
Trigger: GAATCCTTTTGGATAACATCATTTCTCTGTTCCACA...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCATCTCCAATATGGTCCTaGGCAGGATATCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSSPIWS*AGYPAS
Trigger: GCTTGCTGGATATCCTGCTCAGGACCATATTGGAGA...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTTTCACAACCCATGGTaGCGCGCATATCACCATACT +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMFHNPW*RAYHHT
Trigger: AGTATGGTGATATGCGCGTCACCATGGGTTGTGAAA...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGATCTCTGTATGCAAGTaGCCCAGCAAAGTGACTCTC +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMISVCK*PSKVTL
Trigger: GAGAGTCACTTTGCTGGGGCACTTGCATACAGAGAT...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGGCACTGAAGCTTAATTaGCTGCAGAGAATCGTCCAC +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMALKLN*LQRIVH
Trigger: GTGGACGATTCTCTGCAGGCAATTAAGCTTCAGTGC...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGCCTCTCCTATCTTCATaGAGTCCCTGTAGTCTAACA +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRPLLSS*SPCSLT
Trigger: TGTTAGACTACAGGGACTGCATGAAGATAGGAGAGG...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCAGCCAATCTTCTTaGCATCCACCTCTCCTATCT +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMCSQSS*HPPLLS
Trigger: AGATAGGAGAGGTGGATGGCAAGAAGATTGGCTGCA...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGGCCTCTGTGAAGTTCTaGGCCTTGAGATGCAGATCG +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKASVKF*ALRCRS
Trigger: CGATCTGCATCTCAAGGCGCAGAACTTCACAGAGGC...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGTCTTTGACAAAGAATaGCTCTTGATACCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMVFDKE*LLIPGD
Trigger: GTCTCCAGGTATCAAGAGGCATTCTTTGTCAAAGAC...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACTCCAGAATCTGTGCCTaGTCAAGCATCAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDSRICA*SSISSL
Trigger: AAGAGAACTGATGCTTGAGCAGGCACAGATTCTGGA...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCAGATGCTGATGTCCTCTaGGTCTACCATTGCGTACTC +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSDADVL*VYHCVL
Trigger: GAGTACGCAATGGTAGACCCAGAGGACATCAGCATC...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGTCTCCGTGTAACAGTTaGAGGGAAACTGCTAATCCT +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRSPCNS*RETANP
Trigger: AGGATTAGCAGTTTCCCTCCAACTGTTACACGGAGA...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTTGTCCTGGACCAAGTTaGCCACTTCCCGGACATCAA +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCCPGPS*PLPGHQ
Trigger: TTGATGTCCGGGAAGTGGCCAACTTGGTCCAGGACA...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCCCTCTGCCTGGAAGATaGTCTCGTCGGGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIPLPGR*SRRAGW
Trigger: CCAACCAGCCCGACGAGACCATCTTCCAGGCAGAGG...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCATACCATCTGGACTCATaGAAGCAGGGGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSYHLDS*KQGLSF
Trigger: GAAACTCAGCCCCTGCTTCCATGAGTCCAGATGGTA...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAAGGCTCCACGGGTGTTaGGTAAATGGCACTGCACGG +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVRLHGC*VNGTAR
Trigger: CCGTGCAGTGCCATTTACCCAACACCCGTGGAGCCT...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATGTACTCCACTGGAGATaGGGTGAAGGACTGTACGGA +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADVLHWR*GEGLYG
Trigger: TCCGTACAGTCCTTCACCCCATCTCCAGTGGAGTAC...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGGACTGTTCATTGGCTTaGTTTTCAAAGCCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRDCSLA*FSKPEV
Trigger: AACCTCGGGCTTTGAAAACCAAGCCAATGAACAGTC...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTAAGTTTCAGCAGCTCTaGCCACCTGGGACTGTTGTT +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCKFQQL*PPGTVV
Trigger: AACAACAGTCCCAGGTGGTCAGAGCTGCTGAAACTT...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGGTTTTGCCAATGCACTaGAGCTTAATTGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMVLPMH*SLIACR
Trigger: TCTGCAGGCAATTAAGCTTCAGTGCATTGGCAAAAC...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTTTAAACAGCATCCTCTaGGAAGGCTCCACGGGTGTT +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCLNSIL*EGSTGV
Trigger: AACACCCGTGGAGCCTTCTCAGAGGATGCTGTTTAA...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCAGCCGGTACTGAACACTaGAGGCATTCTTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSAGTEH*RHSFSL
Trigger: GAGAGAAAAAGAATGCCTGCAGTGTTCAGTACCGGC...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGAATTCCTCTTCATTCTaGCCTCCGGTGGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKNSSSF*PPVARE
Trigger: TTCCCTTGCCACCGGAGGGCAGAATGAAGAGGAATT...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCAAAGCTCCAGTCCCTTTaGTCTCTTGTGAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSKLQSL*SLVRGR
Trigger: TCTTCCTCTCACAAGAGAGCAAAGGGACTGGAGCTT...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCATGCAGCCAATCTTCTTaGCATCCACCTCTCCTATCT +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSCSQSS*HPPLLS
Trigger: AGATAGGAGAGGTGGATGGCAAGAAGATTGGCTGCA...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCATGGTGAGGTGCAGGTaGTCCTTGCGCTGCCATTCG +
Preference number: 4 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIMVRCR*SLRCHS
Trigger: CGAATGGCAGCGCAAGGAGCACCTGCACCTCACCAT...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACACTCTCATATTGCTCTaGAATCTTCCGGCACAAGAT +
Preference number: 4 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDTLILL*NLPAQD
Trigger: ATCTTGTGCCGGAAGATTGCAGAGCAATATGAGAGT...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTCCAGAATCTGTGCCTaGTCAAGCATCAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMSRICA*SSISSL
Trigger: AAGAGAACTGATGCTTGAGCAGGCACAGATTCTGGA...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACAAAATTCCAGAATCTGTaGCTGCTCAAGCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTKFQNL*LLKHQF
Trigger: GAACTGATGCTTGAGCAGGCACAGATTCTGGAATTT...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGCACAGCTTTCTCAGGTaGAGAAAGGTTGGGGTCACT +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKHSFLR*RKVGVT
Trigger: AGTGACCCCAACCTTTCTGCACCTGAGAAAGCTGTG...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037488.8
CDS-3UTR GCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAGGGTTTTGCTCTCCTTaGGTACAGGTTCCTCCGACC +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVGFCSP*VQVPPT
Trigger: GGTCGGAGGAACCTGTACGCAAGGAGAGCAAAACCC...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAGTACTCACTAGCCGGTaGCTCTCCAGAGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVVLTSR*LSRAKG
Trigger: TCCTTTGGCTCTGGAGAGCCACCGGCTAGTGAGTAC...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACACTTGGGAAACATCTCTaGGCGTATCAATATTCGGAA +
Preference number: 4 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTLGKHL*AYQYSE
Trigger: TTCCGAATATTGATACGCCCAGAGATGTTTCCCAAG...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCGCCATTCGGTCTGCATaGGGTAGGTCAGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIAIRSA*GRSGTP
Trigger: GGGAGTTCCTGACCTACCCCATGCAGACCGAATGGC...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATTGCATGGCGATGGCATaGGGGAACTCGTTCAGCATT +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHCMAMA*GNSFSI
Trigger: AATGCTGAACGAGTTCCCCCATGCCATCGCCATGCA...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCGGTTGGCATGCTGCATaGCGATGGCATGGGGGAACT +
Preference number: 4 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTGWHAA*RWHGGT
Trigger: AGTTCCCCCATGCCATCGCCATGCAGCATGCCAACC...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACTTTCTAACACTTCGATaGCGTTTTCCAGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDFLTLR*RFPEDS
Trigger: TGAGTCCTCTGGAAAACGCCATCGAAGTGTTAGAAA...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTATACCCTGGTACCATCTaGACTCATGGAAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVYPGTI*THGSRG
Trigger: GCCCCTGCTTCCATGAGTCCAGATGGTACCAGGGTA...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTACAGGTGCAGAAAGGTTaGGGTCACTTCGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVQVQKG*GHFEAR
Trigger: CCTTGCCTCGAAGTGACCCCAACCTTTCTGCACCTG...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAAGGGGGACACTGATGTaGTGTGTCTTGCTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVRGTLM*CVLLAK
Trigger: CTTCGCCAGCAAGACACACCACATCAGTGTCCCCCT...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTACACTTCTCCAGGATCTaGACAGTGTCTCCGATCTCC +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVHFSRI*TVSPIS
Trigger: GGAGATCGGAGACACTGTTCAGATCCTGGAGAAGTG...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGTGTTCCCAAGGAAGATaGCCTTGGAAAATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKCSQGR*PWKMGA
Trigger: AGCTCCCATTTTCCAAGGTCATCTTCCTTGGGAACA...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATGAGCTTCAACAGTTCTaGGTACACAGCTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADELQQF*VHSWKG
Trigger: TCCTTTCCAGCTGTGTACTCAGAACTGTTGAAGCTC...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCAGTTTTGCCAATGCACTaGAGCTTAATTGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSVLPMH*SLIACR
Trigger: TCTGCAGGCAATTAAGCTTCAGTGCATTGGCAAAAC...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCAAGTGGATGTGGAGGTaGTGCAGTACGACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIKWMWR*CSTTGR
Trigger: CCTGCCTGTCGTACTGCATCACCTCCACATCCACTT...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCTCGTCTGACACTGGCTaGTCAGGGTCTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTSSDTG*SGSSAA
Trigger: AGCAGCTGAAGACCCTGATCAGCCAGTGTCAGACGA...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATACTGGTCACATTAGGTaGAGCAGAGTGAGTGGAACT +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADTGHIR*SRVSGT
Trigger: AGTTCCACTCACTCTGCTTCACCTAATGTGACCAGT...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGTTCTGGCCACACTCTTaGCTCCTTTCTCAAATTCCC +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKFWPHS*LLSQIP
Trigger: GGGAATTTGAGAAAGGAGGCAAGAGTGTGGCCAGAA...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATGATGAGATCTCTGTATaGAAGTGCCCCAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADDEISV*KCPSKV
Trigger: CACTTTGCTGGGGCACTTGCATACAGAGATCTCATC...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTGATGAGATCTCTGTATaGAAGTGCCCCAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCDEISV*KCPSKV
Trigger: CACTTTGCTGGGGCACTTGCATACAGAGATCTCATC...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAAACACTTCCTGGATATaGTCCTGGCGCTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVNTSWI*SWRSAS
Trigger: GGAAGCAGAGCGCCAGGAGCATATCCAGGAAGTGTT...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTGAAGTTCTTACGGAGTaGATCGGAGAGGTACAGAAC +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCEVLTE*IGEVQN
Trigger: GTTCTGTACCTCTCCGATGCACTCCGTAAGAACTTC...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATAGAGCTGTTTCCACATaGTTCCCCAGTCCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADRAVST*FPSPLK
Trigger: CTTTAAGGGACTGGGGAACCATGTGGAAACAGCTCT...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATGCTTATCCGGGGCTTTaGGAAGCCCATTTCTATTCA +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADAYPGL*EAHFYS
Trigger: TGAATAGAAATGGGCTTCCCAAAGCCCCGGATAAGC...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTATGTTCTCGTGGATCTaGTACCACTCGCTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCMFSWI*YHSLSV
Trigger: TACAGAGAGCGAGTGGTACCAGATCCACGAGAACAT...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCATCTCCGTGTAACAGTTaGAGGGAAACTGCTAATCCT +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSSPCNS*RETANP
Trigger: AGGATTAGCAGTTTCCCTCCAACTGTTACACGGAGA...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGATGACCTTGGAAAATaGGAGCTTGAGGTAGCGGGT +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHDDLGK*ELEVAG
Trigger: ACCCGCTACCTCAAGCTCCCATTTTCCAAGGTCATC...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGCCTTTGTGGCCTTCATaGTTTGATTATTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRPLWPS*FDYCSQ
Trigger: TTGGGAACAATAATCAAACCATGAAGGCCACAAAGG...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCCATTCTGCCCTCCGGTaGCAAGGGAAAACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIHSALR*QGKTAF
Trigger: GAAGGCTGTTTTCCCTTGCCACCGGAGGGCAGAATG...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAGACATAAGGAGCTCCTaGATGCAGCAGCGGAATTCC +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVDIRSS*MQQRNS
Trigger: GGAATTCCGCTGCTGCATCCAGGAGCTCCTTATGTC...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGCCTGGCTCTCTGGAATaGGAGTCACAGCATATATCT +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKPGSLE*ESQHIS
Trigger: AGATATATGCTGTGACTCCCATTCCAGAGAGCCAGG...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATTACCTCCTGGCTCTCTaGAATGGGAGTCACAGCATA +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHYLLAL*NGSHSI
Trigger: TATGCTGTGACTCCCATTCCAGAGAGCCAGGAGGTA...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAATGCCGGGTAAGCTCTaGACCAAGTACAGCGATGTC +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVMPGKL*TKYSDV
Trigger: GACATCGCTGTACTTGGTCCAGAGCTTACCCGGCAT...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGGATCCCCTTCATTTCTaGCATAGAGCTGTTTCCACA +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKDPLHF*HRAVST
Trigger: TGTGGAAACAGCTCTATGTCAGAAATGAAGGGGATC...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCAAGGAGTATTCTCTTCTaGTCTGTTCAATGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSRSILF*SVQCLR
Trigger: ACGGAGACATTGAACAGATCAGAAGAGAATACTCCT...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCCACACTTATGCACGATaGGCTCGTGTGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTHTYAR*ARVCHL
Trigger: CAGATGGCACACACGAGCTCATCGTGCATAAGTGTG...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATTGTTCCCAAGGAAGATaGCCTTGGAAAATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHCSQGR*PWKMGA
Trigger: AGCTCCCATTTTCCAAGGTCATCTTCCTTGGGAACA...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTGGATACGTGCACACATaGTCAAGTCCTTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCGYVHT*SSPSVL
Trigger: AAGAACAGAAGGACTTGATCATGTGTGCACGTATCC...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTCAATCAGGGCAGGGATaGAATGAAGTTTGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCQSGQG*NEVCVL
Trigger: GAGAACACAAACTTCATTTCATCCCTGCCCTGATTG...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGTCTCCATCAGCCGAGTaGCAGTGGCAATTAATGAAA +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKSPSAE*QWQLMK
Trigger: TTTCATTAATTGCCACTGTCACTCGGCTGATGGAGA...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCGGCGCTGCTGGTCCATaGTTTTGTCATACAAGGAGG +
Preference number: 4 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIGAAGP*FCHTRR
Trigger: CCTCCTTGTATGACAAAATCATGGACCAGCAGCGCC...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATACGAGGAATACCGGTTaGCAGCTGGGTAACTTAATG +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHTRNTG*QLGNLM
Trigger: CATTAAGTTACCCAGCTGTCAACCGGTATTCCTCGT...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCAAAATCTCTCACTGATTaGGCGATTCTCTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSKSLTD*AILFAV
Trigger: GACAGCAAAGAGAATCGCCCAATCAGTGAGAGATTT...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCGACATAAGGAGCTCCTaGATGCAGCAGCGGAATTCC +
Preference number: 4 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIDIRSS*MQQRNS
Trigger: GGAATTCCGCTGCTGCATCCAGGAGCTCCTTATGTC...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGGGATATCCAGCAAGCTaGCCACTATCACGTCTATTT +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKGYPAS*PLSRLF
Trigger: AAATAGACGTGATAGTGGCCAGCTTGCTGGATATCC...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATGGATATCCAGCAAGCTaGCCACTATCACGTCTATTT +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADGYPAS*PLSRLF
Trigger: AAATAGACGTGATAGTGGCCAGCTTGCTGGATATCC...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCACTTGGGAAACATCTCTaGGCGTATCAATATTCGGAA +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSLGKHL*AYQYSE
Trigger: TTCCGAATATTGATACGCCCAGAGATGTTTCCCAAG...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTATTCCGGAGATCTGGCTaGGGTATCAAGGTTACTTCC +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVFRRSG*GIKVTS
Trigger: GGAAGTAACCTTGATACCCCAGCCAGATCTCCGGAA...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTACTTCCATTGGGAAAATaGACAGGGCTGGCCTGGATA +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVLPLGK*TGLAWI
Trigger: TATCCAGGCCAGCCCTGTCCATTTTCCCAATGGAAG...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGGACTGTTCATTGGCTTaGTTTTCAAAGCCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKDCSLA*FSKPEV
Trigger: AACCTCGGGCTTTGAAAACCAAGCCAATGAACAGTC...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCTGTGGTGTGTCTTGCTaGCGAAGCTTTCTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTCGVSC*RSFLRC
Trigger: GCACCTGAGAAAGCTTCGCCAGCAAGACACACCACA...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220912.2
3UTR CAA 72 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTaGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGL*LNLADWNSESK
Trigger: TTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGATCCCCTTCATTTCTaGCATAGAGCTGTTTCCACA +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHDPLHF*HRAVST
Trigger: TGTGGAAACAGCTCTATGTCAGAAATGAAGGGGATC...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCCAAAGAGTGAGAAGATaGCCTCTAGCTCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTQRVRR*PLAPLP
Trigger: TGGGAGAGGAGCTAGAGGTCATCTTCTCACTCTTTG...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCAAGCATATCACCATTTTaGGTGAGTTTTGTGGAACAG +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSSISPF*VSFVEQ
Trigger: CTGTTCCACAAAACTCACTCAAAATGGTGATATGCT...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATTCTCCATCAGCCGAGTaGCAGTGGCAATTAATGAAA +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHSPSAE*QWQLMK
Trigger: TTTCATTAATTGCCACTGTCACTCGGCTGATGGAGA...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCACATGGTCAAGGGGTTaGTATTCTGCATCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: FVFLHTIDLILSCIDSRITWSRG*YSASAS
Trigger: CGAGGCAGATGCAGAATATCAACCCCTTGACCATGT...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAAGGGGTCTCATATCTTaGGGTACAAACTTCTCGTGC +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVRGLIS*GTNFSC
Trigger: GCACGAGAAGTTTGTACCTCAAGATATGAGACCCCT...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAACGAGGAATACCGGTTaGCAGCTGGGTAACTTAATG +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVTRNTG*QLGNLM
Trigger: CATTAAGTTACCCAGCTGTCAACCGGTATTCCTCGT...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGAAAAATGTACTCTTGTaGCTTCAACACTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMKNVLL*LQHFLD
Trigger: ATCCAGGAAGTGTTGAAGGCACAAGAGTACATTTTT...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATGTGAACATCTCCAGCTaGAGACACAACTGGTTTATA +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADVNISS*RHNWFI
Trigger: TATAAACCAGTTGTGTCTGCAGCTGGAGATGTTCAC...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATACTCTCATATTGCTCTaGAATCTTCCGGCACAAGAT +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADTLILL*NLPAQD
Trigger: ATCTTGTGCCGGAAGATTGCAGAGCAATATGAGAGT...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAATGTGCCACAGGCGATaGAAGAGATCCCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVMCHRR*KRSPSF
Trigger: AAATGAAGGGGATCTCTTCCATCGCCTGTGGCACAT...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGAAAAGGATTCCTTTGTaGCCTTCATGGTTTGATTAT +
Preference number: 4 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRKRIPL*PSWFDY
Trigger: ATAATCAAACCATGAAGGCCACAAAGGAATCCTTTT...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCGACATTCCGGAGATCTaGCTGGGGTATCAAGGTTAC +
Preference number: 4 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTDIPEI*LGYQGY
Trigger: GTAACCTTGATACCCCAGCCAGATCTCCGGAATGTC...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCTACCTCCTGGCTCTCTaGAATGGGAGTCACAGCATA +
Preference number: 4 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIYLLAL*NGSHSI
Trigger: TATGCTGTGACTCCCATTCCAGAGAGCCAGGAGGTA...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGTTTCTAACACTTCGATaGCGTTTTCCAGAGGACTCA +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKFLTLR*RFPEDS
Trigger: TGAGTCCTCTGGAAAACGCCATCGAAGTGTTAGAAA...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCTGTAGATGTCCTTCCTaGGTTCACTGCTACCCAAGT +
Preference number: 4 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTCRCPS*VHCYPS
Trigger: ACTTGGGTAGCAGTGAACTCAGGAAGGACATCTACA...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCGTTATGGACACTCCGTaGGAGAACACTGAGGAGTAT +
Preference number: 4 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIVMDTP*ENTEEY
Trigger: ATACTCCTCAGTGTTCTCTCACGGAGTGTCCATAAC...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCATGTGGAACAGAGAAATaGTGTTATCCAAAAGGATTC +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSCGTEK*CYPKGF
Trigger: GAATCCTTTTGGATAACATCATTTCTCTGTTCCACA...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCAATGACAGGCTTAAAATaGTGGAACTTGCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSMTGLK*WNLLSC
Trigger: ACAAGATAGCAAGTTCCATCATTTTAAGCCTGTCAT...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCGAGCTTCAACAGTTCTaGGTACACAGCTGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTELQQF*VHSWKG
Trigger: TCCTTTCCAGCTGTGTACTCAGAACTGTTGAAGCTC...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATCAGCACAGACTTTTCTaGGCTATTTTTCTTGATGAG +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADQHRLF*AIFLDE
Trigger: CTCATCAAGAAAAATAGCTCAGAAAAGTCTGTGCTG...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATTATATCTGTAAATACTaGGCCTCTGCCTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHYICKY*ASAWKM
Trigger: CATCTTCCAGGCAGAGGCTCAGTATTTACAGATATA...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTACTTTATAGAAGCTTTTaGTGTTGTCTGGGACCCCCT +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVLYRSF*CCLGPP
Trigger: AGGGGGTCCCAGACAACATCAAAAGCTTCTATAAAG...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCCCACCCAGAGACTCTTaGATTCGTTCTCCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTPPRDS*IRSPCL
Trigger: AAGACAAGGAGAACGAATTCAAGAGTCTCTGGGTGG...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATATTTCATTCATGATGTaGCACAGGCGATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHISFMM*HRRWKR
Trigger: TCTCTTCCATCGCCTGTGGCACATCATGAATGAAAT...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCTTCTGGCCACACTCTTaGCTCCTTTCTCAAATTCCC +
Preference number: 4 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTFWPHS*LLSQIP
Trigger: GGGAATTTGAGAAAGGAGGCAAGAGTGTGGCCAGAA...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTTGCTAAGGATACGTaGACACATGATCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHVAKDT*THDQVL
Trigger: AAGGACTTGATCATGTGTGCACGTATCCTTAGCAAC...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTAAAACGGTAAAAATCTaGAGCAAGAAATCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCKTVKI*SKKSLS
Trigger: GCTGAGGGATTTCTTGCTGCAGATTTTTACCGTTTT...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTGAACATCTCCAGCTaGAGACACAACTGGTTTATA +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHVNISS*RHNWFI
Trigger: TATAAACCAGTTGTGTCTGCAGCTGGAGATGTTCAC...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTACCTCTCCTATCTTCATaGAGTCCCTGTAGTCTAACA +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVPLLSS*SPCSLT
Trigger: TGTTAGACTACAGGGACTGCATGAAGATAGGAGAGG...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCAGAGCTGTTTCCACATaGTTCCCCAGTCCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIRAVST*FPSPLK
Trigger: CTTTAAGGGACTGGGGAACCATGTGGAAACAGCTCT...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATCTGCTAATCCTGCATTaGAGCCAGTCAAATTATAGC +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHLLILH*SQSNYS
Trigger: GCTATAATTTGACTGGCTCCAATGCAGGATTAGCAG...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGAGCTGCAGACACAACTaGTTTATAAAAATGACAGCG +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKSCRHN*FIKMTA
Trigger: CGCTGTCATTTTTATAAACCAGTTGTGTCTGCAGCT...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATAGGGTCTTCAGCTGCTaGTTCTTGTTTTCTAACACT +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHRVFSC*FLFSNT
Trigger: AGTGTTAGAAAACAAGAACCAGCAGCTGAAGACCCT...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATGGCAAGAGTTTTCTCTaGAATGTTTGTGTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADGKSFL*NVCVCQ
Trigger: CTGACAAACACAAACATTCCAGAGAAAACTCTTGCC...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCGGATACGTGCACACATaGTCAAGTCCTTCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTGYVHT*SSPSVL
Trigger: AAGAACAGAAGGACTTGATCATGTGTGCACGTATCC...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCCTTTATAGAAGCTTTTaGTGTTGTCTGGGACCCCCT +
Preference number: 4 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTLYRSF*CCLGPP
Trigger: AGGGGGTCCCAGACAACATCAAAAGCTTCTATAAAG...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAATTTCATTCATGATGTaGCACAGGCGATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVISFMM*HRRWKR
Trigger: TCTCTTCCATCGCCTGTGGCACATCATGAATGAAAT...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTAAAAATGTACTCTTGTaGCTTCAACACTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCKNVLL*LQHFLD
Trigger: ATCCAGGAAGTGTTGAAGGCACAAGAGTACATTTTT...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTACTGCTAATCCTGCATTaGAGCCAGTCAAATTATAGC +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVLLILH*SQSNYS
Trigger: GCTATAATTTGACTGGCTCCAATGCAGGATTAGCAG...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCAGGAGTATTCTCTTCTaGTCTGTTCAATGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIRSILF*SVQCLR
Trigger: ACGGAGACATTGAACAGATCAGAAGAGAATACTCCT...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR TCA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATATGACAGGCTTAAAATaGTGGAACTTGCTATCTTGT +
Preference number: 4 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHMTGLK*WNLLSC
Trigger: ACAAGATAGCAAGTTCCATCATTTTAAGCCTGTCAT...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR GCA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAAAAACGGTAAAAATCTaGAGCAAGAAATCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: FNETQPHISCNIWRFRSVKTVKI*SKKSLS
Trigger: GCTGAGGGATTTCTTGCTGCAGATTTTTACCGTTTT...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCAAATCTCTCACTGATTaGGCGATTCTCTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTKSLTD*AILFAV
Trigger: GACAGCAAAGAGAATCGCCCAATCAGTGAGAGATTT...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGAAAAGGATTCCTTTGTaGCCTTCATGGTTTGATTAT +
Preference number: 4 (lower is better)
Translates to: LLLNLADWNSESKLHLEKKRIPL*PSWFDY
Trigger: ATAATCAAACCATGAAGGCCACAAAGGAATCCTTTT...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCCCTTTGTGGCCTTCATaGTTTGATTATTGTTCCCAA +
Preference number: 4 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIPLWPS*FDYCSQ
Trigger: TTGGGAACAATAATCAAACCATGAAGGCCACAAAGG...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CCA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCAGCTGCAGACACAACTaGTTTATAAAAATGACAGCG +
Preference number: 4 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTSCRHN*FIKMTA
Trigger: CGCTGTCATTTTTATAAACCAGTTGTGTCTGCAGCT...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 90 bp GCTGGGCACGGGCACCGGCACCGGCACCGGCACCGGCACAGGCACTaGCTGTTCATTGGCTTGGTTTTCAAAGCCCGAGGTTTCCGACGT +
Preference number: 5 (lower is better)
Translates to: AGHGHRHRHRHRHRH*LFIGLVFKARGFRR
Trigger: ACGTCGGAAACCTCGGGCTTTGAAAACCAAGCCAATGAACAGTCAGTGCCTGTGCCGGTGCCGGTGCCGGTGCCGGTGCCCGTGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp GGCACCGGCACCGGCACCGGCACAGGCACTGACTGTTCATTGGCTTaGTTTTCAAAGCCCGAGGTTTCCGACGTGCTACACCGGCTAAGC +
Preference number: 5 (lower is better)
Translates to: GTGTGTGTGTDCSLA*FSKPEVSDVLHRLS
Trigger: GCTTAGCCGGTGTAGCACGTCGGAAACCTCGGGCTTTGAAAACCAAGCCAATGAACAGTCAGTGCCTGTGCCGGTGCCGGTGCCGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 90 bp CCTTGCGCTGCCATTCGGTCTGCATGGGGTAGGTCAGGAACTCCCTaGGGGGCCGATCAGACCACTCCAGCAGCTCGTCATACAACAGGA +
Preference number: 5 (lower is better)
Translates to: PCAAIRSAWGRSGTP*GADQTTPAARHTTG
Trigger: TCCTGTTGTATGACGAGCTGCTGGAGTGGTCTGATCGGCCCCTCAGGGAGTTCCTGACCTACCCCATGCAGACCGAATGGCAGCGCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 90 bp TACGGAGCCCTTCAATGGAGAACGTCCAGCAGGCGAGGGGGACACTaGTGTGGTGTGTCTTGCTGGCGAAGCAGTCTGTGTGGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: YGALQWRTSSRRGGH*CGVSCWRSSLCGPW
Trigger: CCAAGGCCCACACAGACTGCTTCGCCAGCAAGACACACCACATCAGTGTCCCCCTCGCCTGCTGGACGTTCTCCATTGAAGGGCTCCGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037488.8
CDS CCA 90 bp CCTCTGCCTGGAAGATGGTCTCGTCGGGCTGGTTGGCATGCTGCATaGCGATGGCATGGGGGAACTCGTTCAGCATTCGCTGTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: PLPGRWSRRAGWHAA*RWHGGTRSAFAVGR
Trigger: CCTTCCAACAGCGAATGCTGAACGAGTTCCCCCATGCCATCGCCATGCAGCATGCCAACCAGCCCGACGAGACCATCTTCCAGGCAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp AGCCCTTCAATGGAGAACGTCCAGCAGGCGAGGGGGACACTGATGTaGTGTGTCTTGCTGGCGAAGCAGTCTGTGTGGGCCTTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: SPSMENVQQARGTLM*CVLLAKQSVWALEG
Trigger: TCCCTCCAAGGCCCACACAGACTGCTTCGCCAGCAAGACACACCACATCAGTGTCCCCCTCGCCTGCTGGACGTTCTCCATTGAAGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037488.8
CDS-3UTR CAA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGAGGTGCAGGTGCTCCTaGCGCTGCCATTCGGTCTGC +
Preference number: 5 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLRCRCS*RCHSVC
Trigger: GCAGACCGAATGGCAGCGCAAGGAGCACCTGCACCT...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 90 bp TACGGAGCCCTTCAATGGAGAACGTCCAGCAGGCGAGGGGGACACTaGTGTGGTGTGTCTTGCTGGCGAAGCTTTCTCAGGTGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: YGALQWRTSSRRGGH*CGVSCWRSFLRCRK
Trigger: CTTTCTGCACCTGAGAAAGCTTCGCCAGCAAGACACACCACATCAGTGTCCCCCTCGCCTGCTGGACGTTCTCCATTGAAGGGCTCCGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220912.2
CDS CCA 90 bp AGCCCTTCAATGGAGAACGTCCAGCAGGCGAGGGGGACACTGATGTaGTGTGTCTTGCTGGCGAAGCTTTCTCAGGTGCAGAAAGGTTGG +
Preference number: 5 (lower is better)
Translates to: SPSMENVQQARGTLM*CVLLAKLSQVQKGW
Trigger: CCAACCTTTCTGCACCTGAGAAAGCTTCGCCAGCAAGACACACCACATCAGTGTCCCCCTCGCCTGCTGGACGTTCTCCATTGAAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGGTGTCCTGGACCAAGTaGGCCACTTCCCGGACATCA +
Preference number: 5 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLVSWTK*ATSRTS
Trigger: TGATGTCCGGGAAGTGGCCAACTTGGTCCAGGACAC...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 90 bp CCAGTGACATCCTGGAACTGCAGCCTCATGGCGGAGCTGGATGCTTaGGGCCGACTAGTGATCTCCAATATGGTCCTGAGCAGGATATCC +
Preference number: 5 (lower is better)
Translates to: PVTSWNCSLMAELDA*GRLVISNMVLSRIS
Trigger: GGATATCCTGCTCAGGACCATATTGGAGATCACTAGTCGGCCTCAAGCATCCAGCTCCGCCATGAGGCTGCAGTTCCAGGATGTCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 90 bp TTCCCCAGTGACATCCTGGAACTGCAGCCTCATGGCGGAGCTGGATaGTTGAGGCCGACTAGTGATCTCCAATATGGTCCTGAGCAGGAT +
Preference number: 5 (lower is better)
Translates to: FPSDILELQPHGGAG*LRPTSDLQYGPEQD
Trigger: ATCCTGCTCAGGACCATATTGGAGATCACTAGTCGGCCTCAAGCATCCAGCTCCGCCATGAGGCTGCAGTTCCAGGATGTCACTGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp TCCAGTCGGGCAGTAATGTGGCGCTTCACATCCTTCATCCTGTCATaGGTGAGATGGCCAACTAGCACCTGCCGTCGCAGATCGAGGATT +
Preference number: 5 (lower is better)
Translates to: SSRAVMWRFTSFILS*VRWPTSTCRRRSRI
Trigger: AATCCTCGATCTGCGACGGCAGGTGCTAGTTGGCCATCTCACCCATGACAGGATGAAGGATGTGAAGCGCCACATTACTGCCCGACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp TTGCTCTCTTGTGAGAGGAAGAAGCGGACGGACATAAGGAGCTCCTaGATGCAGCAGCGGAATTCCTCTTCATTCTGCCCTCCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LLSCERKKRTDIRSS*MQQRNSSSFCPPVA
Trigger: TGCCACCGGAGGGCAGAATGAAGAGGAATTCCGCTGCTGCATCCAGGAGCTCCTTATGTCCGTCCGCTTCTTCCTCTCACAAGAGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp GCAGGGGCTGAGTTTCTACACACACGAGGGCTTCCATTGGGAAAATaGACAGGGCTGGCCTGGATACAAGCAGGGAACTCCTGTATCCCA +
Preference number: 5 (lower is better)
Translates to: AGAEFLHTRGLPLGK*TGLAWIQAGNSCIP
Trigger: TGGGATACAGGAGTTCCCTGCTTGTATCCAGGCCAGCCCTGTCCATTTTCCCAATGGAAGCCCTCGTGTGTGTAGAAACTCAGCCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 90 bp CCCAGGTTGGAACACATGAGGCTCTTCATCTGGACAAAGAGGTGGTaGCTGCTGGCCTGCACAGGGGTGTCTTTCTTCCGATGTCGATGT +
Preference number: 5 (lower is better)
Translates to: PRLEHMRLFIWTKRW*LLACTGVSFFRCRC
Trigger: ACATCGACATCGGAAGAAAGACACCCCTGTGCAGGCCAGCAGTCACCACCTCTTTGTCCAGATGAAGAGCCTCATGTGTTCCAACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 90 bp TCATCTCTACCACTTCTCGCTTTTCCACTTCGAACCAGCGGGAGATaGCGGGTAAGCTCTGGACCAAGTACAGCGATGTCCTTTCCACCC +
Preference number: 5 (lower is better)
Translates to: SSLPLLAFPLRTSGR*RVSSGPSTAMSFPP
Trigger: GGGTGGAAAGGACATCGCTGTACTTGGTCCAGAGCTTACCCGGCATCTCCCGCTGGTTCGAAGTGGAAAAGCGAGAAGTGGTAGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp GAATCGTCCACATGCATGATGGTAGGTAGGCTGCCCAGGGTGTCCTaGACCAAGTTGGCCACTTCCCGGACATCAAAGAGCTTCAACAGT +
Preference number: 5 (lower is better)
Translates to: ESSTCMMVGRLPRVS*TKLATSRTSKSFNS
Trigger: ACTGTTGAAGCTCTTTGATGTCCGGGAAGTGGCCAACTTGGTCCAGGACACCCTGGGCAGCCTACCTACCATCATGCATGTGGACGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp GAGTCACAGCATATATCTGTAAATACTGAGCCTCTGCCTGGAAGATaGTCTCGTCGGGCTGGTTGGCATGCTGCATGGCGATGGCATGGG +
Preference number: 5 (lower is better)
Translates to: ESQHISVNTEPLPGR*SRRAGWHAAWRWHG
Trigger: CCCATGCCATCGCCATGCAGCATGCCAACCAGCCCGACGAGACCATCTTCCAGGCAGAGGCTCAGTATTTACAGATATATGCTGTGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp TCATGGAAGCAGGGGCTGAGTTTCTACACACACGAGGGCTTCCATTaGGAAAATGGACAGGGCTGGCCTGGATACAAGCAGGGAACTCCT +
Preference number: 5 (lower is better)
Translates to: SWKQGLSFYTHEGFH*ENGQGWPGYKQGTP
Trigger: AGGAGTTCCCTGCTTGTATCCAGGCCAGCCCTGTCCATTTTCCCAATGGAAGCCCTCGTGTGTGTAGAAACTCAGCCCCTGCTTCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGCGTTCTCCTTGTCTTTaGCGCCTTTGTGGAATGGCC +
Preference number: 5 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLRSPCL*RLCGMA
Trigger: GGCCATTCCACAAAGGCGCAAAAGACAAGGAGAACG...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 90 bp CACTTTCAGGACCAGGTCATCCTTTGTCTCTCCGGTGAGGAGATCTaGAATGCTAAGGACTGCACAGCCAAAAGGTCGCCGGTACTGAAC +
Preference number: 5 (lower is better)
Translates to: HFQDQVILCLSGEEI*NAKDCTAKRSPVLN
Trigger: GTTCAGTACCGGCGACCTTTTGGCTGTGCAGTCCTTAGCATTGCAGATCTCCTCACCGGAGAGACAAAGGATGACCTGGTCCTGAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp TCTCGCTTTTCCACTTCGAACCAGCGGGAGATGCCGGGTAAGCTCTaGACCAAGTACAGCGATGTCCTTTCCACCCAGAGACTCTTGAAT +
Preference number: 5 (lower is better)
Translates to: SRFSTSNQREMPGKL*TKYSDVLSTQRLLN
Trigger: ATTCAAGAGTCTCTGGGTGGAAAGGACATCGCTGTACTTGGTCCAGAGCTTACCCGGCATCTCCCGCTGGTTCGAAGTGGAAAAGCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGTGCACGGTCTATCTCTaGGGGACAGGCAAGAGTTTT +
Preference number: 5 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLCTVYL*GTGKSF
Trigger: AAAACTCTTGCCTGTCCCCAAGAGATAGACCGTGCA...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 90 bp GACCAAGTTGGCCACTTCCCGGACATCAAAGAGCTTCAACAGTTCTaGGTACACAGCTGGAAAGGAGCTCAAGAACACAGCCTGCGACTG +
Preference number: 5 (lower is better)
Translates to: DQVGHFPDIKELQQF*VHSWKGAQEHSLRL
Trigger: CAGTCGCAGGCTGTGTTCTTGAGCTCCTTTCCAGCTGTGTACTCAGAACTGTTGAAGCTCTTTGATGTCCGGGAAGTGGCCAACTTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 90 bp TCTAGGGATTACCCTGGTACCATCTGGACTCATGGAAGCAGGGGCTaGGTTTCTACACACACGAGGGCTTCCATTGGGAAAATGGACAGG +
Preference number: 5 (lower is better)
Translates to: SRDYPGTIWTHGSRG*VSTHTRASIGKMDR
Trigger: CCTGTCCATTTTCCCAATGGAAGCCCTCGTGTGTGTAGAAACTCAGCCCCTGCTTCCATGAGTCCAGATGGTACCAGGGTAATCCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 90 bp TTCACATCCTTCATCCTGTCATGGGTGAGATGGCCAACTAGCACCTaGCGTCGCAGATCGAGGATTTCATTCATGATGTGCCACAGGCGA +
Preference number: 5 (lower is better)
Translates to: FTSFILSWVRWPTST*RRRSRISFMMCHRR
Trigger: TCGCCTGTGGCACATCATGAATGAAATCCTCGATCTGCGACGGCAGGTGCTAGTTGGCCATCTCACCCATGACAGGATGAAGGATGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 90 bp GTCATCCTTTGTCTCTCCGGTGAGGAGATCTGCAATGCTAAGGACTaGACAGCCAAAAGGTCGCCGGTACTGAACACTGCAGGCATTCTT +
Preference number: 5 (lower is better)
Translates to: VILCLSGEEICNAKD*TAKRSPVLNTAGIL
Trigger: AAGAATGCCTGCAGTGTTCAGTACCGGCGACCTTTTGGCTGTGCAGTCCTTAGCATTGCAGATCTCCTCACCGGAGAGACAAAGGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 90 bp ACAGCATCCTCTGAGAAGGCTCCACGGGTGTTGGGTAAATGGCACTaGACGGTCTATCTCTTGGGGACAGGCAAGAGTTTTCTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: TASSEKAPRVLGKWH*TVYLLGTGKSFLWN
Trigger: ATTCCAGAGAAAACTCTTGCCTGTCCCCAAGAGATAGACCGTGCAGTGCCATTTACCCAACACCCGTGGAGCCTTCTCAGAGGATGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp GCAGTAATGTGGCGCTTCACATCCTTCATCCTGTCATGGGTGAGATaGCCAACTAGCACCTGCCGTCGCAGATCGAGGATTTCATTCATG +
Preference number: 5 (lower is better)
Translates to: AVMWRFTSFILSWVR*PTSTCRRRSRISFM
Trigger: CATGAATGAAATCCTCGATCTGCGACGGCAGGTGCTAGTTGGCCATCTCACCCATGACAGGATGAAGGATGTGAAGCGCCACATTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp CTACACACACGAGGGCTTCCATTGGGAAAATGGACAGGGCTGGCCTaGATACAAGCAGGGAACTCCTGTATCCCAAAGCTCGATTTCATC +
Preference number: 5 (lower is better)
Translates to: LHTRGLPLGKWTGLA*IQAGNSCIPKLDFI
Trigger: GATGAAATCGAGCTTTGGGATACAGGAGTTCCCTGCTTGTATCCAGGCCAGCCCTGTCCATTTTCCCAATGGAAGCCCTCGTGTGTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTTACGTTTCATCACCTTaGCCCTCCGACATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSAYVSSP*PSDIRL
Trigger: CAGCCTGATGTCGGAGGGCAAAGGTGATGAAACGTA...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 90 bp ACGATGAGCTCGTGTGTGCCATCTGGGAGAGTCCTTCCGTCTTCTTaGATCAGGGGCACGAAAGAGAAACCGAACAACTTCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: TMSSCVPSGRVLPSS*IRGTKEKPNNFFSP
Trigger: AGGAGAAAAGAAGTTGTTCGGTTTCTCTTTCGTGCCCCTGATGCAAGAAGACGGAAGGACTCTCCCAGATGGCACACACGAGCTCATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 90 bp GTACTCTTGTGCCTTCAACACTTCCTGGATATGCTCCTGGCGCTCTaGTTCCGTTATCCTGTCCACGTACCACTTGAGCACTTTGATGAG +
Preference number: 5 (lower is better)
Translates to: VLLCLQHFLDMLLAL*FRYPVHVPLEHFDE
Trigger: CTCATCAAAGTGCTCAAGTGGTACGTGGACAGGATAACGGAAGCAGAGCGCCAGGAGCATATCCAGGAAGTGTTGAAGGCACAAGAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp TCTAGTCCCAGTTGTTCATTTCCCCAATCCAGTCGGGCAGTAATGTaGCGCTTCACATCCTTCATCCTGTCATGGGTGAGATGGCCAACT +
Preference number: 5 (lower is better)
Translates to: SSPSCSFPQSSRAVM*RFTSFILSWVRWPT
Trigger: AGTTGGCCATCTCACCCATGACAGGATGAAGGATGTGAAGCGCCACATTACTGCCCGACTGGATTGGGGAAATGAACAACTGGGACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp AGTTTCTACACACACGAGGGCTTCCATTGGGAAAATGGACAGGGCTaGCCTGGATACAAGCAGGGAACTCCTGTATCCCAAAGCTCGATT +
Preference number: 5 (lower is better)
Translates to: SFYTHEGFHWENGQG*PGYKQGTPVSQSSI
Trigger: AATCGAGCTTTGGGATACAGGAGTTCCCTGCTTGTATCCAGGCCAGCCCTGTCCATTTTCCCAATGGAAGCCCTCGTGTGTGTAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGAGCTCCTCTCCCAGGTaGGAACACATGAGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMSSSPR*EHMRLF
Trigger: GAAGAGCCTCATGTGTTCCAACCTGGGAGAGGAGCT...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCACATGGTCAAGGGGTaGATATTCTGCATCTGCCTC +
Preference number: 5 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSAHMVKG*IFCICL
Trigger: GAGGCAGATGCAGAATATCAACCCCTTGACCATGTG...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGACACGAGGGCTTCCATaGGGAAAATGGACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMTRGLP*GKWTGL
Trigger: CAGCCCTGTCCATTTTCCCAATGGAAGCCCTCGTGT...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACAAGGCTCCACGGGTGTaGGGTAAATGGCACTGCACG +
Preference number: 5 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDKAPRV*GKWHCT
Trigger: CGTGCAGTGCCATTTACCCAACACCCGTGGAGCCTT...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 90 bp TTGAGGCACATGGTCAAGGGGTTGATATTCTGCATCTGCCTCGTCTaGCACTGGCTGATCAGGGTCTTCAGCTGCTGGTTCTTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: LRHMVKGLIFCICLV*HWLIRVFSCWFLFS
Trigger: AGAAAACAAGAACCAGCAGCTGAAGACCCTGATCAGCCAGTGTCAGACGAGGCAGATGCAGAATATCAACCCCTTGACCATGTGCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp TGTGTTTTCTTCACACTTATGCACGATGAGCTCGTGTGTGCCATCTaGGAGAGTCCTTCCGTCTTCTTGCATCAGGGGCACGAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: CVFFTLMHDELVCAI*ESPSVFLHQGHERE
Trigger: TTCTCTTTCGTGCCCCTGATGCAAGAAGACGGAAGGACTCTCCCAGATGGCACACACGAGCTCATCGTGCATAAGTGTGAAGAAAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp AGGCTCCACGGGTGTTGGGTAAATGGCACTGCACGGTCTATCTCTTaGGGACAGGCAAGAGTTTTCTCTGGAATGTTTGTGTTTGTCAGA +
Preference number: 5 (lower is better)
Translates to: RLHGCWVNGTARSIS*GQARVFSGMFVFVR
Trigger: TCTGACAAACACAAACATTCCAGAGAAAACTCTTGCCTGTCCCCAAGAGATAGACCGTGCAGTGCCATTTACCCAACACCCGTGGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGAGACAGCCTGTGATCTaGTCTGGGTGGGTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMRQPVI*SGWVLH
Trigger: ATGGAGAACCCACCCAGACAAGATCACAGGCTGTCT...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTTCCACCTGTTTAAAGTaGCCACTCCTTCTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSASTCLK*PLLLCS
Trigger: GGAGCAAAGAAGGAGTGGCAACTTTAAACAGGTGGA...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGTGCAGCCAATCTTCTaGCCATCCACCTCTCCTATC +
Preference number: 5 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMVQPIF*PSTSPI
Trigger: GATAGGAGAGGTGGATGGCAAGAAGATTGGCTGCAC...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGGTCTCGTCGGGCTGGTaGGCATGCTGCATGGCGATG +
Preference number: 5 (lower is better)
Translates to: LLLNLADWNSESKLHLEKVSSGW*ACCMAM
Trigger: CATCGCCATGCAGCATGCCAACCAGCCCGACGAGAC...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AATCCTCTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTGATTGCCCTGTAATATaGCTTACTTCAGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: NPLPQKKDHRTSEQRHSADCPVI*LTSAEA
Trigger: GGCCTCTGCTGAAGTAAGCAATATTACAGGGCAATC...AGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 90 bp TCTTCATGCAGTCCCTGTAGTCTAACAACCTCTCCATCAGCCGAGTaGCAGTGGCAATTAATGAAACGCCACTTTCCCTCCATGTTTCCC +
Preference number: 5 (lower is better)
Translates to: SSCSPCSLTTSPSAE*QWQLMKRHFPSMFP
Trigger: GGGAAACATGGAGGGAAAGTGGCGTTTCATTAATTGCCACTGTCACTCGGCTGATGGAGAGGTTGTTAGACTACAGGGACTGCATGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 90 bp TGTCGTAGCGGAACTTCCAAATGTGGTTCACTTTATAGAAGCTTTTaGTGTTGTCTGGGACCCCCTCTCTCTGCAGTACCTCCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: CRSGTSKCGSLYRSF*CCLGPPLSAVPPGS
Trigger: AGAGCCAGGAGGTACTGCAGAGAGAGGGGGTCCCAGACAACATCAAAAGCTTCTATAAAGTGAACCACATTTGGAAGTTCCGCTACGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 90 bp TGTCCTTTCCACCCAGAGACTCTTGAATTCGTTCTCCTTGTCTTTTaGGCCTTTGTGGAATGGCCTGTCGTAGCGGAACTTCCAAATGTG +
Preference number: 5 (lower is better)
Translates to: CPFHPETLEFVLLVF*AFVEWPVVAELPNV
Trigger: CACATTTGGAAGTTCCGCTACGACAGGCCATTCCACAAAGGCGCAAAAGACAAGGAGAACGAATTCAAGAGTCTCTGGGTGGAAAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 90 bp TTTGACAAAGAATGCCTCTTGATACCTGGAGACCCCACCGTTCACTaGAGCATCTATGACTCCATTGAGGCACATGGTCAAGGGGTTGAT +
Preference number: 5 (lower is better)
Translates to: FDKECLLIPGDPTVH*SIYDSIEAHGQGVD
Trigger: ATCAACCCCTTGACCATGTGCCTCAATGGAGTCATAGATGCTGCAGTGAACGGTGGGGTCTCCAGGTATCAAGAGGCATTCTTTGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGTGGGAGCCCCGGAATTaGTCCACAGGAATAGGAAGT +
Preference number: 5 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRWEPRN*STGIGS
Trigger: ACTTCCTATTCCTGTGGACAAATTCCGGGGCTCCCA...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp CTTCCCCAGAAAAAGGACCACAGGACAAGCGAGCAGAGACACTCAGCTCTCCTGCTTAAAAATGTACTCTaGTGCCTTCAACACTTCCTG +
Preference number: 5 (lower is better)
Translates to: LPQKKDHRTSEQRHSALLLKNVL*CLQHFL
Trigger: CAGGAAGTGTTGAAGGCACAAGAGTACATTTTTAAG...CAGGAGAGCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGATGACAGTCCAGTCCTaGGGAAACATCTCTGGGCGT +
Preference number: 5 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRMTVQS*GNISGR
Trigger: ACGCCCAGAGATGTTTCCCAAGGACTGGACTGTCAT...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTCTCGTCGGGCTGGTaGGCATGCTGCATGGCGATG +
Preference number: 5 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHVSSGW*ACCMAM
Trigger: CATCGCCATGCAGCATGCCAACCAGCCCGACGAGAC...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACAGACAAAGAATGCCTCTaGATACCTGGAGACCCCACC +
Preference number: 5 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTDKECL*IPGDPT
Trigger: GGTGGGGTCTCCAGGTATCAAGAGGCATTCTTTGTC...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp TTAAAAATGTACTCTTGTGCCTTCAACACTTCCTGGATATGCTCCTaGCGCTCTGCTTCCGTTATCCTGTCCACGTACCACTTGAGCACT +
Preference number: 5 (lower is better)
Translates to: LKMYSCAFNTSWICS*RSASVILSTYHLST
Trigger: AGTGCTCAAGTGGTACGTGGACAGGATAACGGAAGCAGAGCGCCAGGAGCATATCCAGGAAGTGTTGAAGGCACAAGAGTACATTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp GTCCATCATATCGTGAAAAATAGGAATCATGACATTCCGGAGATCTaGCTGGGGTATCAAGGTTACTTCCAGAAAGGGCCCAATCAGGGC +
Preference number: 5 (lower is better)
Translates to: VHHIVKNRNHDIPEI*LGYQGYFQKGPNQG
Trigger: GCCCTGATTGGGCCCTTTCTGGAAGTAACCTTGATACCCCAGCCAGATCTCCGGAATGTCATGATTCCTATTTTTCACGATATGATGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGCTGTCCACGTACCACTaGAGCACTTTGATGAGATCT +
Preference number: 5 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMLSTYH*STLMRS
Trigger: AGATCTCATCAAAGTGCTCAAGTGGTACGTGGACAG...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCTACGTTTCATCACCTTaGCCCTCCGACATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCAYVSSP*PSDIRL
Trigger: CAGCCTGATGTCGGAGGGCAAAGGTGATGAAACGTA...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACACACATGGTCAAGGGGTaGATATTCTGCATCTGCCTC +
Preference number: 5 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTHMVKG*IFCICL
Trigger: GAGGCAGATGCAGAATATCAACCCCTTGACCATGTG...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATCTCAGTCCTGGGGAGTaGTACTCCACTGGAGATGGG +
Preference number: 5 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADLSPGE*YSTGDG
Trigger: CCCATCTCCAGTGGAGTACAACTCCCCAGGACTGAG...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp GTTAGCAACCAGGCGCATGACAGTCCAGTCCTTGGGAAACATCTCTaGGCGTATCAATATTCGGAAAACGGTAAAAATCTGCAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: VSNQAHDSPVLGKHL*AYQYSENGKNLQQE
Trigger: TTCTTGCTGCAGATTTTTACCGTTTTCCGAATATTGATACGCCCAGAGATGTTTCCCAAGGACTGGACTGTCATGCGCCTGGTTGCTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGAGCTCCTCTCCCAGGTaGGAACACATGAGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: LLLNLADWNSESKLHLEKSSSPR*EHMRLF
Trigger: GAAGAGCCTCATGTGTTCCAACCTGGGAGAGGAGCT...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGTTTCTCCTTTCTCCTTaGTGGAACAATGCCGGAACT +
Preference number: 5 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMFLLSP*WNNAGT
Trigger: AGTTCCGGCATTGTTCCACAAAGGAGAAAGGAGAAA...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCAAGACAGCCTGTGATCTaGTCTGGGTGGGTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSRQPVI*SGWVLH
Trigger: ATGGAGAACCCACCCAGACAAGATCACAGGCTGTCT...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACAATGAGACAGAACACGTaGCTAAGGATACGTGCACAC +
Preference number: 5 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTMRQNT*LRIRAH
Trigger: GTGTGCACGTATCCTTAGCAACGTGTTCTGTCTCAT...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCAGGTGCAGGTGCTCCTaGCGCTGCCATTCGGTCTGC +
Preference number: 5 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTRCRCS*RCHSVC
Trigger: GCAGACCGAATGGCAGCGCAAGGAGCACCTGCACCT...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCAGTTCAGCATTCGCTGTaGGAAGGCCTCCAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSVQHSL*EGLQSF
Trigger: GAAAGACTGGAGGCCTTCCAACAGCGAATGCTGAAC...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTACACGAGGGCTTCCATaGGGAAAATGGACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCTRGLP*GKWTGL
Trigger: CAGCCCTGTCCATTTTCCCAATGGAAGCCCTCGTGT...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATAAGGCTCCACGGGTGTaGGGTAAATGGCACTGCACG +
Preference number: 5 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHKAPRV*GKWHCT
Trigger: CGTGCAGTGCCATTTACCCAACACCCGTGGAGCCTT...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATTCAGGTGCAGAAAGGTaGGGGTCACTTCGAGGCAAG +
Preference number: 5 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADSGAER*GSLRGK
Trigger: CTTGCCTCGAAGTGACCCCAACCTTTCTGCACCTGA...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATCTCAGTCCTGGGGAGTaGTACTCCACTGGAGATGGG +
Preference number: 5 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHLSPGE*YSTGDG
Trigger: CCCATCTCCAGTGGAGTACAACTCCCCAGGACTGAG...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCACCAAGGAAGATGACCTaGGAAAATGGGAGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSPRKMT*ENGSLR
Trigger: CCTCAAGCTCCCATTTTCCAAGGTCATCTTCCTTGG...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCATGAGACAGAACACGTaGCTAAGGATACGTGCACAC +
Preference number: 5 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCAMRQNT*LRIRAH
Trigger: GTGTGCACGTATCCTTAGCAACGTGTTCTGTCTCAT...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGATCAGGCTGTCCAATTaGTCAATTAGCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMIRLSN*SISLAS
Trigger: GGAGGCCAAGCTAATTGACAAATTGGACAGCCTGAT...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATGTGCAGCCAATCTTCTaGCCATCCACCTCTCCTATC +
Preference number: 5 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADVQPIF*PSTSPI
Trigger: GATAGGAGAGGTGGATGGCAAGAAGATTGGCTGCAC...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGCGTTCTCCTTGTCTTTaGCGCCTTTGTGGAATGGCC +
Preference number: 5 (lower is better)
Translates to: LLLNLADWNSESKLHLEKRSPCL*RLCGMA
Trigger: GGCCATTCCACAAAGGCGCAAAAGACAAGGAGAACG...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGAAGGGGTCTCATATCTaGAGGTACAAACTTCTCGTG +
Preference number: 5 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRKGSHI*RYKLLV
Trigger: CACGAGAAGTTTGTACCTCAAGATATGAGACCCCTT...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCGATTGCCCTGTAATATaGCTTACTTCAGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCADCPVI*LTSAEA
Trigger: GGCCTCTGCTGAAGTAAGCAATATTACAGGGCAATC...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TGCTCAAGGGGAGAGCTGAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGCTGGAATGTTTGTGTTaGTCAGACAACAAAGGCGAA +
Preference number: 5 (lower is better)
Translates to: CSRGELRSSPSFLKSQEMLECLC*SDNKGE
Trigger: TTCGCCTTTGTTGTCTGACAAACACAAACATTCCAG...CATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTCAGCTCTCCCCTTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATTCAGGTGCAGAAAGGTaGGGGTCACTTCGAGGCAAG +
Preference number: 5 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHSGAER*GSLRGK
Trigger: CTTGCCTCGAAGTGACCCCAACCTTTCTGCACCTGA...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCAACAAGACTGGGGAATTaGAACTCAGTCCTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSTRLGN*NSVLGS
Trigger: ACTCCCCAGGACTGAGTTCAAATTCCCCAGTCTTGT...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 90 bp CATCTTGCTCAGGTTCCTGTAGTCATAGTAACTCTCATATTGCTCTaGAATCTTCCGGCACAAGATAATGCCATTCTCCCAACATTTGCC +
Preference number: 5 (lower is better)
Translates to: HLAQVPVVIVTLILL*NLPAQDNAILPTFA
Trigger: GGCAAATGTTGGGAGAATGGCATTATCTTGTGCCGGAAGATTGCAGAGCAATATGAGAGTTACTATGACTACAGGAACCTGAGCAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTCGCGCATTCAGCTTCTaGATGATGTTCTCGTGGATC +
Preference number: 5 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCRAFSF*MMFSWI
Trigger: GATCCACGAGAACATCATCAAGAAGCTGAATGCGCG...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCATTTCTGGCCACACTCTaGCCTCCTTTCTCAAATTCC +
Preference number: 5 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSFLATL*PPFSNS
Trigger: GGAATTTGAGAAAGGAGGCAAGAGTGTGGCCAGAAA...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCACTGTCCACGTACCACTaGAGCACTTTGATGAGATCT +
Preference number: 5 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSLSTYH*STLMRS
Trigger: AGATCTCATCAAAGTGCTCAAGTGGTACGTGGACAG...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCGTGTCCTGGACCAAGTaGGCCACTTCCCGGACATCA +
Preference number: 5 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIVSWTK*ATSRTS
Trigger: TGATGTCCGGGAAGTGGCCAACTTGGTCCAGGACAC...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGGTTGTGATGATAACATaGTTAGCAACCAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMVVMIT*LATRRM
Trigger: CATGCGCCTGGTTGCTAACAATGTTATCATCACAAC...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp CCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACATTCAGCTGCTGGTTCTaGTTTTCTAACACTTCGATG +
Preference number: 5 (lower is better)
Translates to: PSFLKSQEMAVVLVCAQTFSCWF*FSNTSM
Trigger: CATCGAAGTGTTAGAAAACAAGAACCAGCAGCTGAA...TGTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGACAAGACTGGGGAATTaGAACTCAGTCCTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: LLLNLADWNSESKLHLEKTRLGN*NSVLGS
Trigger: ACTCCCCAGGACTGAGTTCAAATTCCCCAGTCTTGT...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 90 bp ATGATAATGTCAGAAAAACCCAGCTTCCGCGTTATGGACACTCCGTaGGAGAACACTGAGGAGTATTCTCTTCTGATCTGTTCAATGTCT +
Preference number: 5 (lower is better)
Translates to: MIMSEKPSFRVMDTP*ENTEEYSLLICSMS
Trigger: AGACATTGAACAGATCAGAAGAGAATACTCCTCAGTGTTCTCTCACGGAGTGTCCATAACGCGGAAGCTGGGTTTTTCTGACATTATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 90 bp CTTCATGGTTTGATTATTGTTCCCAAGGAAGATGACCTTGGAAAATaGGAGCTTGAGGTAGCGGGTAGTATCCTGAAGGTTTGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: LHGLIIVPKEDDLGK*ELEVAGSILKVCVF
Trigger: GAAAACACAAACCTTCAGGATACTACCCGCTACCTCAAGCTCCCATTTTCCAAGGTCATCTTCCTTGGGAACAATAATCAAACCATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTTTTCTGGCCACACTCTaGCCTCCTTTCTCAAATTCC +
Preference number: 5 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCFLATL*PPFSNS
Trigger: GGAATTTGAGAAAGGAGGCAAGAGTGTGGCCAGAAA...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTATGGGAGCCCCGGAATTaGTCCACAGGAATAGGAAGT +
Preference number: 5 (lower is better)
Translates to: FNETQPHISCNIWRFRSVWEPRN*STGIGS
Trigger: ACTTCCTATTCCTGTGGACAAATTCCGGGGCTCCCA...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TATGCTGCTGTATCCATGCTAGAATGGTCCACAATCCTCTTCCCCAGAAAAAGGCTTAAAAATGTACTCTaGTGCCTTCAACACTTCCTG +
Preference number: 5 (lower is better)
Translates to: YAAVSMLEWSTILFPRKRLKNVL*CLQHFL
Trigger: CAGGAAGTGTTGAAGGCACAAGAGTACATTTTTAAG...CCTTTTTCTGGGGAAGAGGATTGTGGACCATTCTAGCATGGATACAGCAGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACTCTGAGCTATTTTTCTaGATGAGACAGAACACGTTG +
Preference number: 5 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDSELFF*MRQNTL
Trigger: CAACGTGTTCTGTCTCATCAAGAAAAATAGCTCAGA...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAATGACAGTCCAGTCCTaGGGAAACATCTCTGGGCGT +
Preference number: 5 (lower is better)
Translates to: FNETQPHISCNIWRFRSVMTVQS*GNISGR
Trigger: ACGCCCAGAGATGTTTCCCAAGGACTGGACTGTCAT...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp ACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCCAGACAATTTGTCAATTAGCTaGGCCTCCACCTGTTTAAAG +
Preference number: 5 (lower is better)
Translates to: TFFPEVSRNGRCVSMCPDNLSIS*ASTCLK
Trigger: CTTTAAACAGGTGGAGGCCAAGCTAATTGACAAATT...GTCTGGGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTATCAGGCTGTCCAATTaGTCAATTAGCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCIRLSN*SISLAS
Trigger: GGAGGCCAAGCTAATTGACAAATTGGACAGCCTGAT...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCATAGTAACTCTCATATaGCTCTGCAATCTTCCGGCA +
Preference number: 5 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCAIVTLI*LCNLPA
Trigger: TGCCGGAAGATTGCAGAGCAATATGAGAGTTACTAT...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGTGCTGGTCCATGATTTaGTCATACAAGGAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LLLNLADWNSESKLHLEKCWSMI*SYKEAS
Trigger: GGAAGCCTCCTTGTATGACAAAATCATGGACCAGCA...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATTGCTGGTCCATGATTTaGTCATACAAGGAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADCWSMI*SYKEAS
Trigger: GGAAGCCTCCTTGTATGACAAAATCATGGACCAGCA...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AACCAGCCTGCTTTAGCCTTTAAATCTGAAGATAGGAGCTCAACATTCTGCTCAAAGGGGTCTCATATCTaGAGGTACAAACTTCTCGTG +
Preference number: 5 (lower is better)
Translates to: NQPALAFKSEDRSSTFCSKGSHI*RYKLLV
Trigger: CACGAGAAGTTTGTACCTCAAGATATGAGACCCCTT...TGAGCAGAATGTTGAGCTCCTATCTTCAGATTTAAAGGCTAAAGCAGGCTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATTGCACGGTCTATCTCTaGGGGACAGGCAAGAGTTTT +
Preference number: 5 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHCTVYL*GTGKSF
Trigger: AAAACTCTTGCCTGTCCCCAAGAGATAGACCGTGCA...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp CTCTTGCTTAATCTAGCTGATTGGAACTCCGAAAGCAAATTGCACCTTGAAAAGTTTCTCCTTTCTCCTTaGTGGAACAATGCCGGAACT +
Preference number: 5 (lower is better)
Translates to: LLLNLADWNSESKLHLEKFLLSP*WNNAGT
Trigger: AGTTCCGGCATTGTTCCACAAAGGAGAAAGGAGAAA...CTTTTCAAGGTGCAATTTGCTTTCGGAGTTCCAATCAGCTAGATTAAGCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGTGCCAATTTGTCAATTAGCTaGGCCTCCACCTGTTTAAAG +
Preference number: 5 (lower is better)
Translates to: SSPSFLKSQEMAVVLVCANLSIS*ASTCLK
Trigger: CTTTAAACAGGTGGAGGCCAAGCTAATTGACAAATT...GGCACATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCGTTCAGCATTCGCTGTaGGAAGGCCTCCAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIVQHSL*EGLQSF
Trigger: GAAAGACTGGAGGCCTTCCAACAGCGAATGCTGAAC...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 90 bp GGAAACATCTCTGGGCGTATCAATATTCGGAAAACGGTAAAAATCTaGAGCAAGAAATCCCTCAGCTCCTCTTTAGTACTGAAACTATTC +
Preference number: 5 (lower is better)
Translates to: GNISGRINIRKTVKI*SKKSLSSSLVLKLF
Trigger: GAATAGTTTCAGTACTAAAGAGGAGCTGAGGGATTTCTTGCTGCAGATTTTTACCGTTTTCCGAATATTGATACGCCCAGAGATGTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATATTGGGCGATTCTCTTaGCTGTCAAAGAGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHIGRFS*LSKSEK
Trigger: CTTCTCACTCTTTGACAGCAAAGAGAATCGCCCAAT...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCCCAAGGAAGATGACCTaGGAAAATGGGAGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIPRKMT*ENGSLR
Trigger: CCTCAAGCTCCCATTTTCCAAGGTCATCTTCCTTGG...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp GCACAAAATTCAAGTAAACACTTCTCCTGGGGTCTCTTGCTTAATCTAGCTGATTCCAAAAGGATTCCTTaGTGGCCTTCATGGTTTGAT +
Preference number: 5 (lower is better)
Translates to: AQNSSKHFSWGLLLNLADSKRIP*WPSWFD
Trigger: ATCAAACCATGAAGGCCACAAAGGAATCCTTTTGGA...ATCAGCTAGATTAAGCAAGAGACCCCAGGAGAAGTGTTTACTTGAATTTTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp GAGGTCTTCACCTTCTTTCCTGAAGTCTCAAGAAATGGCCGTTGTGTTAGTATGAAGCATATCACCATTTaGAGTGAGTTTTGTGGAACA +
Preference number: 5 (lower is better)
Translates to: EVFTFFPEVSRNGRCVSMKHITI*SEFCGT
Trigger: TGTTCCACAAAACTCACTCAAAATGGTGATATGCTT...CATACTAACACAACGGCCATTTCTTGAGACTTCAGGAAAGAAGGTGAAGACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTATAGTAACTCTCATATaGCTCTGCAATCTTCCGGCA +
Preference number: 5 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCIVTLI*LCNLPA
Trigger: TGCCGGAAGATTGCAGAGCAATATGAGAGTTACTAT...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATGTTTCAGCTGCTGGTTCTaGTTTTCTAACACTTCGATG +
Preference number: 5 (lower is better)
Translates to: YITTYKVLFHPPTTVPSCFSCWF*FSNTSM
Trigger: CATCGAAGTGTTAGAAAACAAGAACCAGCAGCTGAA...ACATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 90 bp AGAAATGATGTTATCCAAAAGGATTCCTTTGTGGCCTTCATGGTTTaGTTATTGTTCCCAAGGAAGATGACCTTGGAAAATGGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: RNDVIQKDSFVAFMV*LLFPRKMTLENGSL
Trigger: CAAGCTCCCATTTTCCAAGGTCATCTTCCTTGGGAACAATAATCAAACCATGAAGGCCACAAAGGAATCCTTTTGGATAACATCATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCTCCACCTGTTTAAAGTaGCCACTCCTTCTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTSTCLK*PLLLCS
Trigger: GGAGCAAAGAAGGAGTGGCAACTTTAAACAGGTGGA...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp AATACATTACTACATACAAGGTGCTTTTTCACCCTCCTACAACTGTGCCATCATAGTGGAATTATACTGTaGAAGAGCTCACGGTACGTT +
Preference number: 5 (lower is better)
Translates to: NTLLHTRCFFTLLQLCHHSGIIL*KSSRYV
Trigger: AACGTACCGTGAGCTCTTCAACAGTATAATTCCACT...ATGATGGCACAGTTGTAGGAGGGTGAAAAAGCACCTTGTATGTAGTAATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCATTGGGCGATTCTCTTaGCTGTCAAAGAGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTIGRFS*LSKSEK
Trigger: CTTCTCACTCTTTGACAGCAAAGAGAATCGCCCAAT...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCGTTGTGATGATAACATaGTTAGCAACCAGGCGCATG +
Preference number: 5 (lower is better)
Translates to: FVFLHTIDLILSCIDSRIVVMIT*LATRRM
Trigger: CATGCGCCTGGTTGCTAACAATGTTATCATCACAAC...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAAGTGGAATTATACTGTaGAAGAGCTCACGGTACGTT +
Preference number: 5 (lower is better)
Translates to: FNETQPHISCNIWRFRSVSGIIL*KSSRYV
Trigger: AACGTACCGTGAGCTCTTCAACAGTATAATTCCACT...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TTTGTCTTCCTTCACACTATTGATTTAATACTGTCCTGTATTGATTCCCGAATCTCCAAAAGGATTCCTTaGTGGCCTTCATGGTTTGAT +
Preference number: 5 (lower is better)
Translates to: FVFLHTIDLILSCIDSRISKRIP*WPSWFD
Trigger: ATCAAACCATGAAGGCCACAAAGGAATCCTTTTGGA...GATTCGGGAATCAATACAGGACAGTATTAAATCAATAGTGTGAAGGAAGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp GAGAGTTTGAAGAATTCTTTATTTTATGCAGGATTCAAAGTTAATGCCCTCACCCTGGAATGTTTGTGTTaGTCAGACAACAAAGGCGAA +
Preference number: 5 (lower is better)
Translates to: ESLKNSLFYAGFKVNALTLECLC*SDNKGE
Trigger: TTCGCCTTTGTTGTCTGACAAACACAAACATTCCAG...GGTGAGGGCATTAACTTTGAATCCTGCATAAAATAAAGAATTCTTCAAACTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS-3UTR CAA 90 bp TTTAATGAGACTCAGCCCCATATTTCATGTAACATCTGGCGTTTTAGATCAGTAAAGCATATCACCATTTaGAGTGAGTTTTGTGGAACA +
Preference number: 5 (lower is better)
Translates to: FNETQPHISCNIWRFRSVKHITI*SEFCGT
Trigger: TGTTCCACAAAACTCACTCAAAATGGTGATATGCTT...TACTGATCTAAAACGCCAGATGTTACATGAAATATGGGGCTGAGTCTCATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 72 bp GCAGGTGGCTCAGAGGTGACAGGGATGGAGAGGCTGTaGGGTAGCGGGACAGGGCGCCGCAGAGTCCGCTCG +
Preference number: 6 (lower is better)
Translates to: AGGSEVTGMERL*GSGTGRRRVRS
Trigger: CGAGCGGACTCTGCGGCGCCCTGTCCCGCTACCTCACAGCCTCTCCATCCCTGTCACCTCTGAGCCACCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 72 bp TTTTGCTCTCCTTGCGTACAGGTTCCTCCGACCCGCTaGAGCTGGGCACGGGCACCGGCACCGGCACCGGCA +
Preference number: 6 (lower is better)
Translates to: FCSPCVQVPPTR*SWARAPAPAPA
Trigger: TGCCGGTGCCGGTGCCGGTGCCCGTGCCCAGCTTCAGCGGGTCGGAGGAACCTGTACGCAAGGAGAGCAAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp GTCCAGCAGGCGAGGGGGACACTGATGTGGTGTGTCTaGCTGGCGAAGCAGTCTGTGTGGGCCTTGGAGGGA +
Preference number: 6 (lower is better)
Translates to: VQQARGTLMWCV*LAKQSVWALEG
Trigger: TCCCTCCAAGGCCCACACAGACTGCTTCGCCAGCAAGACACACCACATCAGTGTCCCCCTCGCCTGCTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037488.8
CDS TCA 72 bp GCCATTCGGTCTGCATGGGGTAGGTCAGGAACTCCCTaGGGGGCCGATCAGACCACTCCAGCAGCTCGTCAT +
Preference number: 6 (lower is better)
Translates to: AIRSAWGRSGTP*GADQTTPAARH
Trigger: ATGACGAGCTGCTGGAGTGGTCTGATCGGCCCCTCAGGGAGTTCCTGACCTACCCCATGCAGACCGAATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp ATGGAGAACGTCCAGCAGGCGAGGGGGACACTGATGTaGTGTGTCTTGCTGGCGAAGCAGTCTGTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: MENVQQARGTLM*CVLLAKQSVWA
Trigger: GGCCCACACAGACTGCTTCGCCAGCAAGACACACCACATCAGTGTCCCCCTCGCCTGCTGGACGTTCTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037488.8
CDS GCA 72 bp GCCTGGAAGATGGTCTCGTCGGGCTGGTTGGCATGCTaGATGGCGATGGCATGGGGGAACTCGTTCAGCATT +
Preference number: 6 (lower is better)
Translates to: AWKMVSSGWLAC*MAMAWGNSFSI
Trigger: AATGCTGAACGAGTTCCCCCATGCCATCGCCATGCAGCATGCCAACCAGCCCGACGAGACCATCTTCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp GGAAGATGGTCTCGTCGGGCTGGTTGGCATGCTGCATaGCGATGGCATGGGGGAACTCGTTCAGCATTCGCT +
Preference number: 6 (lower is better)
Translates to: GRWSRRAGWHAA*RWHGGTRSAFA
Trigger: AGCGAATGCTGAACGAGTTCCCCCATGCCATCGCCATGCAGCATGCCAACCAGCCCGACGAGACCATCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp ACCGGCACCGGCACCGGCACAGGCACTGACTGTTCATaGGCTTGGTTTTCAAAGCCCGAGGTTTCCGACGTG +
Preference number: 6 (lower is better)
Translates to: TGTGTGTGTDCS*AWFSKPEVSDV
Trigger: CACGTCGGAAACCTCGGGCTTTGAAAACCAAGCCAATGAACAGTCAGTGCCTGTGCCGGTGCCGGTGCCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp GGAGGGACAGGGGGAGAGATAAGTTTCCCACTGTCCGACATGTTCTaGGCTTCTTTCCCACTGTCCAGGCTCCAGCTGCTAGGGGTGGGA +
Preference number: 6 (lower is better)
Translates to: GGTGGEISFPLSDMF*ASFPLSRLQLLGVG
Trigger: TCCCACCCCTAGCAGCTGGAGCCTGGACAGTGGGAAAGAAGCCAAGAACATGTCGGACAGTGGGAAACTTATCTCTCCCCCTGTCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037488.8
CDS CCA 72 bp ATGGAGAACGTCCAGCAGGCGAGGGGGACACTGATGTaGTGTGTCTTGCTGGCGAAGCTTTCTCAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: MENVQQARGTLM*CVLLAKLSQVQ
Trigger: CTGCACCTGAGAAAGCTTCGCCAGCAAGACACACCACATCAGTGTCCCCCTCGCCTGCTGGACGTTCTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220912.2
CDS CAA 72 bp GTCCAGCAGGCGAGGGGGACACTGATGTGGTGTGTCTaGCTGGCGAAGCTTTCTCAGGTGCAGAAAGGTTGG +
Preference number: 6 (lower is better)
Translates to: VQQARGTLMWCV*LAKLSQVQKGW
Trigger: CCAACCTTTCTGCACCTGAGAAAGCTTCGCCAGCAAGACACACCACATCAGTGTCCCCCTCGCCTGCTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220912.2
CDS TCA 72 bp TCCTGGAACTGCAGCCTCATGGCGGAGCTGGATGCTTaGGGCCGACTAGTGATCTCCAATATGGTCCTGAGC +
Preference number: 6 (lower is better)
Translates to: SWNCSLMAELDA*GRLVISNMVLS
Trigger: GCTCAGGACCATATTGGAGATCACTAGTCGGCCTCAAGCATCCAGCTCCGCCATGAGGCTGCAGTTCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 72 bp CTTCAATGGAGAACGTCCAGCAGGCGAGGGGGACACTaGTGTGGTGTGTCTTGCTGGCGAAGCAGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: LQWRTSSRRGGH*CGVSCWRSSLC
Trigger: ACACAGACTGCTTCGCCAGCAAGACACACCACATCAGTGTCCCCCTCGCCTGCTGGACGTTCTCCATTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037488.8
CDS TCA 72 bp CTTCAATGGAGAACGTCCAGCAGGCGAGGGGGACACTaGTGTGGTGTGTCTTGCTGGCGAAGCTTTCTCAGG +
Preference number: 6 (lower is better)
Translates to: LQWRTSSRRGGH*CGVSCWRSFLR
Trigger: CCTGAGAAAGCTTCGCCAGCAAGACACACCACATCAGTGTCCCCCTCGCCTGCTGGACGTTCTCCATTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220912.2
CDS GCA 72 bp AGCTCCTGGATGCAGCAGCGGAATTCCTCTTCATTCTaGCCTCCGGTGGCAAGGGAAAACAGCCTTCGGGAT +
Preference number: 6 (lower is better)
Translates to: SSWMQQRNSSSF*PPVARENSLRD
Trigger: ATCCCGAAGGCTGTTTTCCCTTGCCACCGGAGGGCAGAATGAAGAGGAATTCCGCTGCTGCATCCAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp CATTTGCCTCGGTCGAAGTTCTGGATGATGGTGAGGTaGAGGTGCTCCTTGCGCTGCCATTCGGTCTGCATG +
Preference number: 6 (lower is better)
Translates to: HLPRSKFWMMVR*RCSLRCHSVCM
Trigger: CATGCAGACCGAATGGCAGCGCAAGGAGCACCTGCACCTCACCATCATCCAGAACTTCGACCGAGGCAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp CCACTTCTCGCTTTTCCACTTCGAACCAGCGGGAGATaGCGGGTAAGCTCTGGACCAAGTACAGCGATGTCC +
Preference number: 6 (lower is better)
Translates to: PLLAFPLRTSGR*RVSSGPSTAMS
Trigger: GGACATCGCTGTACTTGGTCCAGAGCTTACCCGGCATCTCCCGCTGGTTCGAAGTGGAAAAGCGAGAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp ACATGCATGATGGTAGGTAGGCTGCCCAGGGTGTCCTaGACCAAGTTGGCCACTTCCCGGACATCAAAGAGC +
Preference number: 6 (lower is better)
Translates to: TCMMVGRLPRVS*TKLATSRTSKS
Trigger: GCTCTTTGATGTCCGGGAAGTGGCCAACTTGGTCCAGGACACCCTGGGCAGCCTACCTACCATCATGCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp TCCACTTCGAACCAGCGGGAGATGCCGGGTAAGCTCTaGACCAAGTACAGCGATGTCCTTTCCACCCAGAGA +
Preference number: 6 (lower is better)
Translates to: STSNQREMPGKL*TKYSDVLSTQR
Trigger: TCTCTGGGTGGAAAGGACATCGCTGTACTTGGTCCAGAGCTTACCCGGCATCTCCCGCTGGTTCGAAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp GCATCCTCTGAGAAGGCTCCACGGGTGTTGGGTAAATaGCACTGCACGGTCTATCTCTTGGGGACAGGCAAG +
Preference number: 6 (lower is better)
Translates to: ASSEKAPRVLGK*HCTVYLLGTGK
Trigger: CTTGCCTGTCCCCAAGAGATAGACCGTGCAGTGCCATTTACCCAACACCCGTGGAGCCTTCTCAGAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp ACCGGCACCGGCACAGGCACTGACTGTTCATTGGCTTaGTTTTCAAAGCCCGAGGTTTCCGACGTGCTACAC +
Preference number: 6 (lower is better)
Translates to: TGTGTGTDCSLA*FSKPEVSDVLH
Trigger: GTGTAGCACGTCGGAAACCTCGGGCTTTGAAAACCAAGCCAATGAACAGTCAGTGCCTGTGCCGGTGCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp CCCAGTGACATCCTGGAACTGCAGCCTCATGGCGGAGCTGGATGCTaGAGGCCGACTAGTGATCTCCAATATGGTCCTGAGCAGGATATC +
Preference number: 6 (lower is better)
Translates to: PSDILELQPHGGAGC*RPTSDLQYGPEQDI
Trigger: GATATCCTGCTCAGGACCATATTGGAGATCACTAGTCGGCCTCAAGCATCCAGCTCCGCCATGAGGCTGCAGTTCCAGGATGTCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp CTCATGGAAGCAGGGGCTGAGTTTCTACACACACGAGGGCTTCCATaGGGAAAATGGACAGGGCTGGCCTGGATACAAGCAGGGAACTCC +
Preference number: 6 (lower is better)
Translates to: LMEAGAEFLHTRGLP*GKWTGLAWIQAGNS
Trigger: GGAGTTCCCTGCTTGTATCCAGGCCAGCCCTGTCCATTTTCCCAATGGAAGCCCTCGTGTGTGTAGAAACTCAGCCCCTGCTTCCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 72 bp CCCACTGCTGTAGCTGCCGGACAAGACTGGGGAATTTaGACTCAGTCCTGGGGAGTTGTACTCCACTGGAGA +
Preference number: 6 (lower is better)
Translates to: PTAVAAGQDWGI*TQSWGVVLHWR
Trigger: TCTCCAGTGGAGTACAACTCCCCAGGACTGAGTTCAAATTCCCCAGTCTTGTCCGGCAGCTACAGCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp GACCAGGTCATCCTTTGTCTCTCCGGTGAGGAGATCTaGAATGCTAAGGACTGCACAGCCAAAAGGTCGCCG +
Preference number: 6 (lower is better)
Translates to: DQVILCLSGEEI*NAKDCTAKRSP
Trigger: CGGCGACCTTTTGGCTGTGCAGTCCTTAGCATTGCAGATCTCCTCACCGGAGAGACAAAGGATGACCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp GACATCCTGGAACTGCAGCCTCATGGCGGAGCTGGATaGTTGAGGCCGACTAGTGATCTCCAATATGGTCCT +
Preference number: 6 (lower is better)
Translates to: DILELQPHGGAG*LRPTSDLQYGP
Trigger: AGGACCATATTGGAGATCACTAGTCGGCCTCAAGCATCCAGCTCCGCCATGAGGCTGCAGTTCCAGGATGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp TGGCGCTTCACATCCTTCATCCTGTCATGGGTGAGATaGCCAACTAGCACCTGCCGTCGCAGATCGAGGATT +
Preference number: 6 (lower is better)
Translates to: WRFTSFILSWVR*PTSTCRRRSRI
Trigger: AATCCTCGATCTGCGACGGCAGGTGCTAGTTGGCCATCTCACCCATGACAGGATGAAGGATGTGAAGCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp GCAGTAATGTGGCGCTTCACATCCTTCATCCTGTCATaGGTGAGATGGCCAACTAGCACCTGCCGTCGCAGA +
Preference number: 6 (lower is better)
Translates to: AVMWRFTSFILS*VRWPTSTCRRR
Trigger: TCTGCGACGGCAGGTGCTAGTTGGCCATCTCACCCATGACAGGATGAAGGATGTGAAGCGCCACATTACTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp CGAGGGCTTCCATTGGGAAAATGGACAGGGCTGGCCTaGATACAAGCAGGGAACTCCTGTATCCCAAAGCTC +
Preference number: 6 (lower is better)
Translates to: RGLPLGKWTGLA*IQAGNSCIPKL
Trigger: GAGCTTTGGGATACAGGAGTTCCCTGCTTGTATCCAGGCCAGCCCTGTCCATTTTCCCAATGGAAGCCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp CAGGGGCTGAGTTTCTACACACACGAGGGCTTCCATTaGGAAAATGGACAGGGCTGGCCTGGATACAAGCAG +
Preference number: 6 (lower is better)
Translates to: QGLSFYTHEGFH*ENGQGWPGYKQ
Trigger: CTGCTTGTATCCAGGCCAGCCCTGTCCATTTTCCCAATGGAAGCCCTCGTGTGTGTAGAAACTCAGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp ATGGTAGGTAGGCTGCCCAGGGTGTCCTGGACCAAGTaGGCCACTTCCCGGACATCAAAGAGCTTCAACAGT +
Preference number: 6 (lower is better)
Translates to: MVGRLPRVSWTK*ATSRTSKSFNS
Trigger: ACTGTTGAAGCTCTTTGATGTCCGGGAAGTGGCCAACTTGGTCCAGGACACCCTGGGCAGCCTACCTACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp TCCCACTGCTGTAGCTGCCGGACAAGACTGGGGAATTaGAACTCAGTCCTGGGGAGTTGTACTCCACTGGAG +
Preference number: 6 (lower is better)
Translates to: SHCCSCRTRLGN*NSVLGSCTPLE
Trigger: CTCCAGTGGAGTACAACTCCCCAGGACTGAGTTCAAATTCCCCAGTCTTGTCCGGCAGCTACAGCAGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 72 bp AATCCTCTGTACCAGCCGTCGCACTTCTCCAGGATCTaGACAGTGTCTCCGATCTCCAATGACAGGCCGTAC +
Preference number: 6 (lower is better)
Translates to: NPLYQPSHFSRI*TVSPISNDRPY
Trigger: GTACGGCCTGTCATTGGAGATCGGAGACACTGTTCAGATCCTGGAGAAGTGCGACGGCTGGTACAGAGGATT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 72 bp GAACACATGAGGCTCTTCATCTGGACAAAGAGGTGGTaGCTGCTGGCCTGCACAGGGGTGTCTTTCTTCCGA +
Preference number: 6 (lower is better)
Translates to: EHMRLFIWTKRW*LLACTGVSFFR
Trigger: TCGGAAGAAAGACACCCCTGTGCAGGCCAGCAGTCACCACCTCTTTGTCCAGATGAAGAGCCTCATGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 72 bp GTAATAGGGAAAGGAGACAGGCAACAAATTCCCCAGTaGCATCCTGGAACTGCAGCCTCATGGCGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: VIGKGDRQQIPQ*HPGTAASWRSW
Trigger: CCAGCTCCGCCATGAGGCTGCAGTTCCAGGATGTCACTGGGGAATTTGTTGCCTGTCTCCTTTCCCTATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp TGCCTTCAACACTTCCTGGATATGCTCCTGGCGCTCTaGTTCCGTTATCCTGTCCACGTACCACTTGAGCAC +
Preference number: 6 (lower is better)
Translates to: CLQHFLDMLLAL*FRYPVHVPLEH
Trigger: GTGCTCAAGTGGTACGTGGACAGGATAACGGAAGCAGAGCGCCAGGAGCATATCCAGGAAGTGTTGAAGGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp TTCACACTTATGCACGATGAGCTCGTGTGTGCCATCTaGGAGAGTCCTTCCGTCTTCTTGCATCAGGGGCAC +
Preference number: 6 (lower is better)
Translates to: FTLMHDELVCAI*ESPSVFLHQGH
Trigger: GTGCCCCTGATGCAAGAAGACGGAAGGACTCTCCCAGATGGCACACACGAGCTCATCGTGCATAAGTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp TGTGAGAGGAAGAAGCGGACGGACATAAGGAGCTCCTaGATGCAGCAGCGGAATTCCTCTTCATTCTGCCCT +
Preference number: 6 (lower is better)
Translates to: CERKKRTDIRSS*MQQRNSSSFCP
Trigger: AGGGCAGAATGAAGAGGAATTCCGCTGCTGCATCCAGGAGCTCCTTATGTCCGTCCGCTTCTTCCTCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp ATGCAGTACGACAGGCAGGAGAATGTACCGCGAGTCTaGGTTGGTATAGAGCTGGCTCTCGACAGTTTTGCC +
Preference number: 6 (lower is better)
Translates to: MQYDRQENVPRV*VGIELALDSFA
Trigger: GGCAAAACTGTCGAGAGCCAGCTCTATACCAACCCAGACTCGCGGTACATTCTCCTGCCTGTCGTACTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp GAGTTTCTACACACACGAGGGCTTCCATTGGGAAAATaGACAGGGCTGGCCTGGATACAAGCAGGGAACTCC +
Preference number: 6 (lower is better)
Translates to: EFLHTRGLPLGK*TGLAWIQAGNS
Trigger: GGAGTTCCCTGCTTGTATCCAGGCCAGCCCTGTCCATTTTCCCAATGGAAGCCCTCGTGTGTGTAGAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp GTCTTGCTGGCGAAGCTTTCTCAGGTGCAGAAAGGTTaGGGTCACTTCGAGGCAAGGCCCCATCTCCAATAT +
Preference number: 6 (lower is better)
Translates to: VLLAKLSQVQKG*GHFEARPHLQY
Trigger: ATATTGGAGATGGGGCCTTGCCTCGAAGTGACCCCAACCTTTCTGCACCTGAGAAAGCTTCGCCAGCAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220912.2
CDS CAA 72 bp GGGGGAGAGATAAGTTTCCCACTGTCCGACATGTTCTaGGCTTCTTTCCCACTGTCCAGGCTCCAGCTGCTA +
Preference number: 6 (lower is better)
Translates to: GGEISFPLSDMF*ASFPLSRLQLL
Trigger: TAGCAGCTGGAGCCTGGACAGTGGGAAAGAAGCCAAGAACATGTCGGACAGTGGGAAACTTATCTCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037488.8
CDS CAA 72 bp TGTCTTGCTGGCGAAGCTTTCTCAGGTGCAGAAAGGTaGGGGTCACTTCGAGGCAAGGCCCCATCTCCAATA +
Preference number: 6 (lower is better)
Translates to: CLAGEAFSGAER*GSLRGKAPSPI
Trigger: TATTGGAGATGGGGCCTTGCCTCGAAGTGACCCCAACCTTTCTGCACCTGAGAAAGCTTCGCCAGCAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220912.2
CDS CAA 90 bp ACATGCATGATGGTAGGTAGGCTGCCCAGGGTGTCCTGGACCAAGTaGGCCACTTCCCGGACATCAAAGAGCTTCAACAGTTCTGAGTAC +
Preference number: 6 (lower is better)
Translates to: TCMMVGRLPRVSWTK*ATSRTSKSFNSSEY
Trigger: GTACTCAGAACTGTTGAAGCTCTTTGATGTCCGGGAAGTGGCCAACTTGGTCCAGGACACCCTGGGCAGCCTACCTACCATCATGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 72 bp ATGGTCAAGGGGTTGATATTCTGCATCTGCCTCGTCTaGCACTGGCTGATCAGGGTCTTCAGCTGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: MVKGLIFCICLV*HWLIRVFSCWF
Trigger: GAACCAGCAGCTGAAGACCCTGATCAGCCAGTGTCAGACGAGGCAGATGCAGAATATCAACCCCTTGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 72 bp TACCCTGGTACCATCTGGACTCATGGAAGCAGGGGCTaGGTTTCTACACACACGAGGGCTTCCATTGGGAAA +
Preference number: 6 (lower is better)
Translates to: YPGTIWTHGSRG*VSTHTRASIGK
Trigger: TTTCCCAATGGAAGCCCTCGTGTGTGTAGAAACTCAGCCCCTGCTTCCATGAGTCCAGATGGTACCAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp TCGTGTGTGCCATCTGGGAGAGTCCTTCCGTCTTCTTaGATCAGGGGCACGAAAGAGAAACCGAACAACTTC +
Preference number: 6 (lower is better)
Translates to: SCVPSGRVLPSS*IRGTKEKPNNF
Trigger: GAAGTTGTTCGGTTTCTCTTTCGTGCCCCTGATGCAAGAAGACGGAAGGACTCTCCCAGATGGCACACACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp TCTGAGAAGGCTCCACGGGTGTTGGGTAAATGGCACTaGACGGTCTATCTCTTGGGGACAGGCAAGAGTTTT +
Preference number: 6 (lower is better)
Translates to: SEKAPRVLGKWH*TVYLLGTGKSF
Trigger: AAAACTCTTGCCTGTCCCCAAGAGATAGACCGTGCAGTGCCATTTACCCAACACCCGTGGAGCCTTCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp CATATATCTGTAAATACTGAGCCTCTGCCTGGAAGATaGTCTCGTCGGGCTGGTTGGCATGCTGCATGGCGA +
Preference number: 6 (lower is better)
Translates to: HISVNTEPLPGR*SRRAGWHAAWR
Trigger: TCGCCATGCAGCATGCCAACCAGCCCGACGAGACCATCTTCCAGGCAGAGGCTCAGTATTTACAGATATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp CTCGTGTGTGCCATCTGGGAGAGTCCTTCCGTCTTCTaGCATCAGGGGCACGAAAGAGAAACCGAACAACTT +
Preference number: 6 (lower is better)
Translates to: LVCAIWESPSVF*HQGHERETEQL
Trigger: AAGTTGTTCGGTTTCTCTTTCGTGCCCCTGATGCAAGAAGACGGAAGGACTCTCCCAGATGGCACACACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp CACGATGAGCTCGTGTGTGCCATCTGGGAGAGTCCTTCCGTCTTCTaGCATCAGGGGCACGAAAGAGAAACCGAACAACTTCTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: HDELVCAIWESPSVF*HQGHERETEQLLFS
Trigger: GGAGAAAAGAAGTTGTTCGGTTTCTCTTTCGTGCCCCTGATGCAAGAAGACGGAAGGACTCTCCCAGATGGCACACACGAGCTCATCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp ATATGCTCCTGGCGCTCTGCTTCCGTTATCCTGTCCACGTACCACTaGAGCACTTTGATGAGATCTCTGTATGCAAGTGCCCCAGCAAAG +
Preference number: 6 (lower is better)
Translates to: ICSWRSASVILSTYH*STLMRSLYASAPAK
Trigger: CTTTGCTGGGGCACTTGCATACAGAGATCTCATCAAAGTGCTCAAGTGGTACGTGGACAGGATAACGGAAGCAGAGCGCCAGGAGCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 72 bp ACAGCTGGAAAGGAGCTCAAGAACACAGCCTGCGACTaGGATAAAGCTCCAGTCCCTTTGCTCTCTTGTGAG +
Preference number: 6 (lower is better)
Translates to: TAGKELKNTACD*DKAPVPLLSCE
Trigger: CTCACAAGAGAGCAAAGGGACTGGAGCTTTATCTCAGTCGCAGGCTGTGTTCTTGAGCTCCTTTCCAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 72 bp GGCCACTTCCCGGACATCAAAGAGCTTCAACAGTTCTaGGTACACAGCTGGAAAGGAGCTCAAGAACACAGC +
Preference number: 6 (lower is better)
Translates to: GHFPDIKELQQF*VHSWKGAQEHS
Trigger: GCTGTGTTCTTGAGCTCCTTTCCAGCTGTGTACTCAGAACTGTTGAAGCTCTTTGATGTCCGGGAAGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp ACCTGCCGTCGCAGATCGAGGATTTCATTCATGATGTaGCACAGGCGATGGAAGAGATCCCCTTCATTTCTG +
Preference number: 6 (lower is better)
Translates to: TCRRRSRISFMM*HRRWKRSPSFL
Trigger: CAGAAATGAAGGGGATCTCTTCCATCGCCTGTGGCACATCATGAATGAAATCCTCGATCTGCGACGGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp TTCATCCTGTCATGGGTGAGATGGCCAACTAGCACCTaGCGTCGCAGATCGAGGATTTCATTCATGATGTGC +
Preference number: 6 (lower is better)
Translates to: FILSWVRWPTST*RRRSRISFMMC
Trigger: GCACATCATGAATGAAATCCTCGATCTGCGACGGCAGGTGCTAGTTGGCCATCTCACCCATGACAGGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp GAATGCCTCTTGATACCTGGAGACCCCACCGTTCACTaGAGCATCTATGACTCCATTGAGGCACATGGTCAA +
Preference number: 6 (lower is better)
Translates to: ECLLIPGDPTVH*SIYDSIEAHGQ
Trigger: TTGACCATGTGCCTCAATGGAGTCATAGATGCTGCAGTGAACGGTGGGGTCTCCAGGTATCAAGAGGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp TGCAGCAGCGGAATTCCTCTTCATTCTGCCCTCCGGTaGCAAGGGAAAACAGCCTTCGGGATTGAACTATAT +
Preference number: 6 (lower is better)
Translates to: CSSGIPLHSALR*QGKTAFGIELY
Trigger: ATATAGTTCAATCCCGAAGGCTGTTTTCCCTTGCCACCGGAGGGCAGAATGAAGAGGAATTCCGCTGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp ATTAAACAGCATCCTCTGAGAAGGCTCCACGGGTGTTaGGTAAATGGCACTGCACGGTCTATCTCTTGGGGA +
Preference number: 6 (lower is better)
Translates to: IKQHPLRRLHGC*VNGTARSISWG
Trigger: TCCCCAAGAGATAGACCGTGCAGTGCCATTTACCCAACACCCGTGGAGCCTTCTCAGAGGATGCTGTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp TGGCGCTCTGCTTCCGTTATCCTGTCCACGTACCACTaGAGCACTTTGATGAGATCTCTGTATGCAAGTGCC +
Preference number: 6 (lower is better)
Translates to: WRSASVILSTYH*STLMRSLYASA
Trigger: GGCACTTGCATACAGAGATCTCATCAAAGTGCTCAAGTGGTACGTGGACAGGATAACGGAAGCAGAGCGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp GAGACCCCACCGTTCACTGCAGCATCTATGACTCCATaGAGGCACATGGTCAAGGGGTTGATATTCTGCATC +
Preference number: 6 (lower is better)
Translates to: ETPPFTAASMTP*RHMVKGLIFCI
Trigger: GATGCAGAATATCAACCCCTTGACCATGTGCCTCAATGGAGTCATAGATGCTGCAGTGAACGGTGGGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp CACGGTCTATCTCTTGGGGACAGGCAAGAGTTTTCTCTGGAATGTTaGTGTTTGTCAGACAACAAAGGCGAAGCTCTGGCACTCGACGGA +
Preference number: 6 (lower is better)
Translates to: HGLSLGDRQEFSLEC*CLSDNKGEALALDG
Trigger: TCCGTCGAGTGCCAGAGCTTCGCCTTTGTTGTCTGACAAACACAAACATTCCAGAGAAAACTCTTGCCTGTCCCCAAGAGATAGACCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp AAGGCTCCACGGGTGTTGGGTAAATGGCACTGCACGGTCTATCTCTaGGGGACAGGCAAGAGTTTTCTCTGGAATGTTTGTGTTTGTCAG +
Preference number: 6 (lower is better)
Translates to: KAPRVLGKWHCTVYL*GTGKSFLWNVCVCQ
Trigger: CTGACAAACACAAACATTCCAGAGAAAACTCTTGCCTGTCCCCAAGAGATAGACCGTGCAGTGCCATTTACCCAACACCCGTGGAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 72 bp AGTCCCTGTAGTCTAACAACCTCTCCATCAGCCGAGTaGCAGTGGCAATTAATGAAACGCCACTTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: SPCSLTTSPSAE*QWQLMKRHFPS
Trigger: GGAGGGAAAGTGGCGTTTCATTAATTGCCACTGTCACTCGGCTGATGGAGAGGTTGTTAGACTACAGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp CCGGTACTGAACACTGCAGGCATTCTTTTTCTCTCCTaGTCCCATTCGACCAATTCGGATAATGTGCACGGT +
Preference number: 6 (lower is better)
Translates to: PVLNTAGILFLS*SHSTNSDNVHG
Trigger: ACCGTGCACATTATCCGAATTGGTCGAATGGGAGCAGGAGAGAAAAAGAATGCCTGCAGTGTTCAGTACCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp AAAATGTACTCTTGTGCCTTCAACACTTCCTGGATATaGTCCTGGCGCTCTGCTTCCGTTATCCTGTCCACG +
Preference number: 6 (lower is better)
Translates to: KMYSCAFNTSWI*SWRSASVILST
Trigger: CGTGGACAGGATAACGGAAGCAGAGCGCCAGGAGCATATCCAGGAAGTGTTGAAGGCACAAGAGTACATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp AGCCAATCTTCTTGCCATCCACCTCTCCTATCTTCATaGAGTCCCTGTAGTCTAACAACCTCTCCATCAGCC +
Preference number: 6 (lower is better)
Translates to: SQSSCHPPLLSS*SPCSLTTSPSA
Trigger: GGCTGATGGAGAGGTTGTTAGACTACAGGGACTGCATGAAGATAGGAGAGGTGGATGGCAAGAAGATTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp CACCCAGAGACTCTTGAATTCGTTCTCCTTGTCTTTTaGGCCTTTGTGGAATGGCCTGTCGTAGCGGAACTT +
Preference number: 6 (lower is better)
Translates to: HPETLEFVLLVF*AFVEWPVVAEL
Trigger: AAGTTCCGCTACGACAGGCCATTCCACAAAGGCGCAAAAGACAAGGAGAACGAATTCAAGAGTCTCTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp AGTTGTTCATTTCCCCAATCCAGTCGGGCAGTAATGTaGCGCTTCACATCCTTCATCCTGTCATGGGTGAGA +
Preference number: 6 (lower is better)
Translates to: SCSFPQSSRAVM*RFTSFILSWVR
Trigger: TCTCACCCATGACAGGATGAAGGATGTGAAGCGCCACATTACTGCCCGACTGGATTGGGGAAATGAACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp GCTTCCGTTATCCTGTCCACGTACCACTTGAGCACTTaGATGAGATCTCTGTATGCAAGTGCCCCAGCAAAG +
Preference number: 6 (lower is better)
Translates to: ASVILSTYHLST*MRSLYASAPAK
Trigger: CTTTGCTGGGGCACTTGCATACAGAGATCTCATCAAAGTGCTCAAGTGGTACGTGGACAGGATAACGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp CACGTTGCTAAGGATACGTGCACACATGATCAAGTCCTTCTGTTCTaGCAAGTGGATGTGGAGGTGATGCAGTACGACAGGCAGGAGAAT +
Preference number: 6 (lower is better)
Translates to: HVAKDTCTHDQVLLF*QVDVEVMQYDRQEN
Trigger: ATTCTCCTGCCTGTCGTACTGCATCACCTCCACATCCACTTGCAAGAACAGAAGGACTTGATCATGTGTGCACGTATCCTTAGCAACGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp CCAACTCTGAAGAATTCAGGTTCCAGGCGCTGCTGGTCCATGATTTaGTCATACAAGGAGGCTTCCATCATCCTCATCTTGCTCAGGTTC +
Preference number: 6 (lower is better)
Translates to: PTLKNSGSRRCWSMI*SYKEASIILILLRF
Trigger: GAACCTGAGCAAGATGAGGATGATGGAAGCCTCCTTGTATGACAAAATCATGGACCAGCAGCGCCTGGAACCTGAATTCTTCAGAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp CTATCTCTTGGGGACAGGCAAGAGTTTTCTCTGGAATGTTTGTGTTaGTCAGACAACAAAGGCGAAGCTCTGGCACTCGACGGAGCAGAA +
Preference number: 6 (lower is better)
Translates to: LSLGDRQEFSLECLC*SDNKGEALALDGAE
Trigger: TTCTGCTCCGTCGAGTGCCAGAGCTTCGCCTTTGTTGTCTGACAAACACAAACATTCCAGAGAAAACTCTTGCCTGTCCCCAAGAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp GCTCTCGACAGTTTTGCCAATGCACTGAAGCTTAATTaGCTGCAGAGAATCGTCCACATGCATGATGGTAGG +
Preference number: 6 (lower is better)
Translates to: ALDSFANALKLN*LQRIVHMHDGR
Trigger: CCTACCATCATGCATGTGGACGATTCTCTGCAGGCAATTAAGCTTCAGTGCATTGGCAAAACTGTCGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp AGTGGAATTATACTGTTGAAGAGCTCACGGTACGTTTCATCACCTTaGCCCTCCGACATCAGGCTGTCCAATTTGTCAATTAGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SGIILLKSSRYVSSP*PSDIRLSNLSISLA
Trigger: GGCCAAGCTAATTGACAAATTGGACAGCCTGATGTCGGAGGGCAAAGGTGATGAAACGTACCGTGAGCTCTTCAACAGTATAATTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp ATCGTGAAAAATAGGAATCATGACATTCCGGAGATCTaGCTGGGGTATCAAGGTTACTTCCAGAAAGGGCCC +
Preference number: 6 (lower is better)
Translates to: IVKNRNHDIPEI*LGYQGYFQKGP
Trigger: GGGCCCTTTCTGGAAGTAACCTTGATACCCCAGCCAGATCTCCGGAATGTCATGATTCCTATTTTTCACGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp AATCCAACTCTGAAGAATTCAGGTTCCAGGCGCTGCTaGTCCATGATTTTGTCATACAAGGAGGCTTCCATC +
Preference number: 6 (lower is better)
Translates to: NPTLKNSGSRRC*SMILSYKEASI
Trigger: GATGGAAGCCTCCTTGTATGACAAAATCATGGACCAGCAGCGCCTGGAACCTGAATTCTTCAGAGTTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp ACATTGTTAGCAACCAGGCGCATGACAGTCCAGTCCTaGGGAAACATCTCTGGGCGTATCAATATTCGGAAA +
Preference number: 6 (lower is better)
Translates to: TLLATRRMTVQS*GNISGRINIRK
Trigger: TTTCCGAATATTGATACGCCCAGAGATGTTTCCCAAGGACTGGACTGTCATGCGCCTGGTTGCTAACAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp AAGAATTCAGGTTCCAGGCGCTGCTGGTCCATGATTTaGTCATACAAGGAGGCTTCCATCATCCTCATCTTG +
Preference number: 6 (lower is better)
Translates to: KNSGSRRCWSMI*SYKEASIILIL
Trigger: CAAGATGAGGATGATGGAAGCCTCCTTGTATGACAAAATCATGGACCAGCAGCGCCTGGAACCTGAATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp TCTCTTGGGGACAGGCAAGAGTTTTCTCTGGAATGTTaGTGTTTGTCAGACAACAAAGGCGAAGCTCTGGCA +
Preference number: 6 (lower is better)
Translates to: SLGDRQEFSLEC*CLSDNKGEALA
Trigger: TGCCAGAGCTTCGCCTTTGTTGTCTGACAAACACAAACATTCCAGAGAAAACTCTTGCCTGTCCCCAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp CTGCCCTCCGGTGGCAAGGGAAAACAGCCTTCGGGATaGAACTATATACTTAAAAATGTACTCTTGTGCCTT +
Preference number: 6 (lower is better)
Translates to: LPSGGKGKQPSG*NYILKNVLLCL
Trigger: AAGGCACAAGAGTACATTTTTAAGTATATAGTTCAATCCCGAAGGCTGTTTTCCCTTGCCACCGGAGGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp ATACTGTTGAAGAGCTCACGGTACGTTTCATCACCTTaGCCCTCCGACATCAGGCTGTCCAATTTGTCAATT +
Preference number: 6 (lower is better)
Translates to: ILLKSSRYVSSP*PSDIRLSNLSI
Trigger: AATTGACAAATTGGACAGCCTGATGTCGGAGGGCAAAGGTGATGAAACGTACCGTGAGCTCTTCAACAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp AAGTCCACAAAGAGAGAACAGTGTCTTTCAGGCTTATCCGGGGCTTaGGGAAGCCCATTTCTATTCAGTCTCAAGAAAAATCTCTCACTG +
Preference number: 6 (lower is better)
Translates to: KSTKREQCLSGLSGA*GSPFLFSLKKNLSL
Trigger: CAGTGAGAGATTTTTCTTGAGACTGAATAGAAATGGGCTTCCCAAAGCCCCGGATAAGCCTGAAAGACACTGTTCTCTCTTTGTGGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp CTCTTCATTCTGCCCTCCGGTGGCAAGGGAAAACAGCCTTCGGGATaGAACTATATACTTAAAAATGTACTCTTGTGCCTTCAACACTTC +
Preference number: 6 (lower is better)
Translates to: LFILPSGGKGKQPSG*NYILKNVLLCLQHF
Trigger: GAAGTGTTGAAGGCACAAGAGTACATTTTTAAGTATATAGTTCAATCCCGAAGGCTGTTTTCCCTTGCCACCGGAGGGCAGAATGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp GTGATGATAACATTGTTAGCAACCAGGCGCATGACAGTCCAGTCCTaGGGAAACATCTCTGGGCGTATCAATATTCGGAAAACGGTAAAA +
Preference number: 6 (lower is better)
Translates to: VMITLLATRRMTVQS*GNISGRINIRKTVK
Trigger: TTTTACCGTTTTCCGAATATTGATACGCCCAGAGATGTTTCCCAAGGACTGGACTGTCATGCGCCTGGTTGCTAACAATGTTATCATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp CATCCTCATCTTGCTCAGGTTCCTGTAGTCATAGTAACTCTCATATaGCTCTGCAATCTTCCGGCACAAGATAATGCCATTCTCCCAACA +
Preference number: 6 (lower is better)
Translates to: HPHLAQVPVVIVTLI*LCNLPAQDNAILPT
Trigger: TGTTGGGAGAATGGCATTATCTTGTGCCGGAAGATTGCAGAGCAATATGAGAGTTACTATGACTACAGGAACCTGAGCAAGATGAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS TCA 72 bp GAATTTGTCCACAGGAATAGGAAGTTTCAGCAGCTCTaGCCACCTGGGACTGTTGTTATGATAGAGCACAAA +
Preference number: 6 (lower is better)
Translates to: EFVHRNRKFQQL*PPGTVVMIEHK
Trigger: TTTGTGCTCTATCATAACAACAGTCCCAGGTGGTCAGAGCTGCTGAAACTTCCTATTCCTGTGGACAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp CAGGTTCCTGTAGTCATAGTAACTCTCATATTGCTCTaGAATCTTCCGGCACAAGATAATGCCATTCTCCCA +
Preference number: 6 (lower is better)
Translates to: QVPVVIVTLILL*NLPAQDNAILP
Trigger: TGGGAGAATGGCATTATCTTGTGCCGGAAGATTGCAGAGCAATATGAGAGTTACTATGACTACAGGAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp GGCTGCATGTTAAAGACTTCATCAGAGCTTTCTGATTaGCCTGTAATATTGCTTACTTCAGCAGAGGCCTGT +
Preference number: 6 (lower is better)
Translates to: GCMLKTSSELSD*PVILLTSAEAC
Trigger: ACAGGCCTCTGCTGAAGTAAGCAATATTACAGGGCAATCAGAAAGCTCTGATGAAGTCTTTAACATGCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp AGAGAGAACAGTGTCTTTCAGGCTTATCCGGGGCTTTaGGAAGCCCATTTCTATTCAGTCTCAAGAAAAATC +
Preference number: 6 (lower is better)
Translates to: RENSVFQAYPGL*EAHFYSVSRKI
Trigger: GATTTTTCTTGAGACTGAATAGAAATGGGCTTCCCAAAGCCCCGGATAAGCCTGAAAGACACTGTTCTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp TTGATTATTGTTCCCAAGGAAGATGACCTTGGAAAATaGGAGCTTGAGGTAGCGGGTAGTATCCTGAAGGTT +
Preference number: 6 (lower is better)
Translates to: LIIVPKEDDLGK*ELEVAGSILKV
Trigger: AACCTTCAGGATACTACCCGCTACCTCAAGCTCCCATTTTCCAAGGTCATCTTCCTTGGGAACAATAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp CTCAAGAAAAATCTCTCACTGATTGGGCGATTCTCTTaGCTGTCAAAGAGTGAGAAGATGACCTCTAGCTCC +
Preference number: 6 (lower is better)
Translates to: LKKNLSLIGRFS*LSKSEKMTSSS
Trigger: GGAGCTAGAGGTCATCTTCTCACTCTTTGACAGCAAAGAGAATCGCCCAATCAGTGAGAGATTTTTCTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS GCA 72 bp TCTGGGCGTATCAATATTCGGAAAACGGTAAAAATCTaGAGCAAGAAATCCCTCAGCTCCTCTTTAGTACTG +
Preference number: 6 (lower is better)
Translates to: SGRINIRKTVKI*SKKSLSSSLVL
Trigger: CAGTACTAAAGAGGAGCTGAGGGATTTCTTGCTGCAGATTTTTACCGTTTTCCGAATATTGATACGCCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp AAGAGAGAACAGTGTCTTTCAGGCTTATCCGGGGCTTaGGGAAGCCCATTTCTATTCAGTCTCAAGAAAAAT +
Preference number: 6 (lower is better)
Translates to: KREQCLSGLSGA*GSPFLFSLKKN
Trigger: ATTTTTCTTGAGACTGAATAGAAATGGGCTTCCCAAAGCCCCGGATAAGCCTGAAAGACACTGTTCTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp CTTGCTCAGGTTCCTGTAGTCATAGTAACTCTCATATaGCTCTGCAATCTTCCGGCACAAGATAATGCCATT +
Preference number: 6 (lower is better)
Translates to: LAQVPVVIVTLI*LCNLPAQDNAI
Trigger: AATGGCATTATCTTGTGCCGGAAGATTGCAGAGCAATATGAGAGTTACTATGACTACAGGAACCTGAGCAAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 90 bp AGCACAGACTTTTCTGAGCTATTTTTCTTGATGAGACAGAACACGTaGCTAAGGATACGTGCACACATGATCAAGTCCTTCTGTTCTTGC +
Preference number: 6 (lower is better)
Translates to: STDFSELFFLMRQNT*LRIRAHMIKSFCSC
Trigger: GCAAGAACAGAAGGACTTGATCATGTGTGCACGTATCCTTAGCAACGTGTTCTGTCTCATCAAGAAAAATAGCTCAGAAAAGTCTGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp ATTTCCTCCAGCACAGACTTTTCTGAGCTATTTTTCTaGATGAGACAGAACACGTTGCTAAGGATACGTGCA +
Preference number: 6 (lower is better)
Translates to: ISSSTDFSELFF*MRQNTLLRIRA
Trigger: TGCACGTATCCTTAGCAACGTGTTCTGTCTCATCAAGAAAAATAGCTCAGAAAAGTCTGTGCTGGAGGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp TTTTCTGAGCTATTTTTCTTGATGAGACAGAACACGTaGCTAAGGATACGTGCACACATGATCAAGTCCTTC +
Preference number: 6 (lower is better)
Translates to: FSELFFLMRQNT*LRIRAHMIKSF
Trigger: GAAGGACTTGATCATGTGTGCACGTATCCTTAGCAACGTGTTCTGTCTCATCAAGAAAAATAGCTCAGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp TGTTATCCAAAAGGATTCCTTTGTGGCCTTCATGGTTaGATTATTGTTCCCAAGGAAGATGACCTTGGAAAA +
Preference number: 6 (lower is better)
Translates to: CYPKGFLCGLHG*IIVPKEDDLGK
Trigger: TTTTCCAAGGTCATCTTCCTTGGGAACAATAATCAAACCATGAAGGCCACAAAGGAATCCTTTTGGATAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CAA 72 bp TGGAACAGAGAAATGATGTTATCCAAAAGGATTCCTTaGTGGCCTTCATGGTTTGATTATTGTTCCCAAGGA +
Preference number: 6 (lower is better)
Translates to: WNREMMLSKRIP*WPSWFDYCSQG
Trigger: TCCTTGGGAACAATAATCAAACCATGAAGGCCACAAAGGAATCCTTTTGGATAACATCATTTCTCTGTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2
CDS CCA 72 bp AACAGAGAAATGATGTTATCCAAAAGGATTCCTTTGTaGCCTTCATGGTTTGATTATTGTTCCCAAGGAAGA +
Preference number: 6 (lower is better)
Translates to: NREMMLSKRIPL*PSWFDYCSQGR
Trigger: TCTTCCTTGGGAACAATAATCAAACCATGAAGGCCACAAAGGAATCCTTTTGGATAACATCATTTCTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037488.8
ENSMUST00000220912.2