Pregenerated sensors for DOCK11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031093Ensembl transcript IDs: ENSMUST00000033419.13, ENSMUST00000115264.2, ENSMUST00000115266.8
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAGCTCCAAATATTCCTaGGAAAGGTCAGTCTCATTG | + |
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Preference number: 2 (lower is better) Translates to: FTDTSTLYESMTILVSGGSSKYS*ERSVSL Trigger: CAATGAGACTGACCTTTCTCAGGAATATTTGGAGCT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| 3UTR-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCTAAATGCTAACAGTTaGACAGCTCCAAATATTCCT | + |
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Preference number: 2 (lower is better) Translates to: FTDTSTLYESMTILVSGGLNANS*TAPNIP Trigger: AGGAATATTTGGAGCTGTGCAACTGTTAGCATTTAG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| 3UTR-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGAAAGGTCAGTCTCATaGCCATTTCCTTCCAAATCT | + |
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Preference number: 3 (lower is better) Translates to: FTDTSTLYESMTILVSGGERSVS*PFPSKS Trigger: AGATTTGGAAGGAAATGGCAATGAGACTGACCTTTC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTGCTCAGCCGCTTGGTaGATTTGCGCACTTCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGCSAAW*ICALRP Trigger: TGGCCGAAGTGCGCAAATTCACCAAGCGGCTGAGCA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033419.13 |
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| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGGACCAGCATTGACCTaGACAGAGACACAGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGGPALT*TETQPC Trigger: GCAGGGCTGTGTCTCTGTGCAGGTCAATGCTGGTCC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGAGACTGGCAGCTGCTaGTCCAATGTGATGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGETGSC*SNVMTL Trigger: GAGGGTCATCACATTGGAGCAGCAGCTGCCAGTCTC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGCTGAGACTGGCAGCTaGTGCTCCAATGTGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGAETGS*CSNVMT Trigger: GGTCATCACATTGGAGCAGCAGCTGCCAGTCTCAGC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAGCCCTGAACATCTTTaGAAATGGGTCTGGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGSPEHL*KWVWLP Trigger: GGGCAGCCAGACCCATTTTCAAAGATGTTCAGGGCT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAGCTTGCATCACCCCTaGTCTGTTTCGAAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGSLHHP*SVSKSW Trigger: CCAGCTCTTCGAAACAGATCAGGGGTGATGCAAGCT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCTAATGGACCAGCATTaGCCTGCACAGAGACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGLMDQH*PAQRHS Trigger: GCTGTGTCTCTGTGCAGGTCAATGCTGGTCCATTAG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGGGGTTCAACTAACTTaGCCTTTTCCAGCACCACGG | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGGVQLT*PFPAPR Trigger: CCGTGGTGCTGGAAAAGGCCAAGTTAGTTGAACCCC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033419.13 |
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| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCGGCCTGCCAGTCGCTaGATATTTTCCAAGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGRPASR*IFSKSS Trigger: ACTGCTCTTGGAAAATATCCAGCGACTGGCAGGCCG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCTGTGTCTTTGTCACTaGCCAGGCTCCCTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGLCLCH*PGSLCL Trigger: CAAACAGAGGGAGCCTGGCCAGTGACAAAGACACAG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCGCATTTTGGGGCACTaGACAACATCAATGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGRILGH*TTSMQA Trigger: TGCCTGCATTGATGTTGTTCAGTGCCCCAAAATGCG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGATGAGAGACTCAGGTaGAAAGCCCTTTGCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGDERLR*KALCIP Trigger: GGGAATGCAAAGGGCTTTTCACCTGAGTCTCTCATC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCCAGGCAAATCCCACTaGAGTTTCCACTGTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGPGKSH*SFHCVL Trigger: CAAGACACAGTGGAAACTCCAGTGGGATTTGCCTGG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTGCTTCTGGTGCAGGTaGATGGGAAGCTCAATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGCFWCR*MGSSIL Trigger: CAAAATTGAGCTTCCCATTCACCTGCACCAGAAGCA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAAGATTGGAATCTACTaGAGTCAAACGGTCCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGKIGIY*SQTVHR Trigger: GCGGTGGACCGTTTGACTTCAGTAGATTCCAATCTT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115266.8 |
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| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAAACTCATCCCTAGATaGAGAACTAGGCATGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGKLIPR*RTRHGC Trigger: GCAGCCATGCCTAGTTCTGCATCTAGGGATGAGTTT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTGTGGGAAAAGCAGTTaGCTTCATAGGTCTGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGCGKSS*LHRSVA Trigger: AGCGACAGACCTATGAAGGCAACTGCTTTTCCCACA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCATGACGGCGCATTTTaGGGCACTGAACAACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGHDGAF*GTEQHQ Trigger: TTGATGTTGTTCAGTGCCCCAAAATGCGCCGTCATG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTTCTCGGCTTTTCCTTaGCTGCTAGTTTCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGFSAFP*LLVSSS Trigger: AGAGGAGGAAACTAGCAGCCAAGGAAAAGCCGAGAA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTTTCCAAACTGGCCATaGTGTTCTCGGCTTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGFPNWP*CSRLFL Trigger: AAGGAAAAGCCGAGAACATCATGGCCAGTTTGGAAA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTTCCGTCTCCTCTACTaGGTTTGTTCAGTTGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGFRLLY*VCSVVL Trigger: CAGAACAACTGAACAAACTCAGTAGAGGAGACGGAA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTCGGATCTGAGTTTTTaGTGTAGGGTTCTGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGSDLSF*CRVLHS Trigger: ACTGTGCAGAACCCTACATCAAAAACTCAGATCCGA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAGATCCAGAGAGCCCTaGACATCTTTGAAAATGGGT | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGRSREP*TSLKMG Trigger: ACCCATTTTCAAAGATGTTCAGGGCTCTCTGGATCT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTGTATCAACTGGGCCTaGAGAGTGCTTGGTTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGCINWA*RVLGFS Trigger: TGAAAAACCAAGCACTCTTCAGGCCCAGTTGATACA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCCCTCTGTTTGTAGGTaGAACAAAGCCACATGGAAA | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGPSVCR*NKATWK Trigger: TTTCCATGTGGCTTTGTTTCACCTACAAACAGAGGG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGATGAAAGATCTCAGTaGGGCAAAGACATGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGDERSQ*GKDMLQ Trigger: CTGAAGCATGTCTTTGCCTCACTGAGATCTTTCATC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCAGGTCTCAAAGACTTaGATGGCAACATCCGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGQVSKT*MATSES Trigger: ACTTTCGGATGTTGCCATGCAAGTCTTTGAGACCTG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033419.13 |
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| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCTGCTCCGTTTCAGCTaGCAGATAATGGCTATACTT | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGLLRFS*QIMAIL Trigger: AAGTATAGCCATTATCTGGCAGCTGAAACGGAGCAG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTGCGCTATTTTGGCTTaGTGGTTCTTGTGCTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGCAILA*WFLCWY Trigger: ATACCAGCACAAGAACCAGCAAGCCAAAATAGCGCA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTACTTCATATCGCTCTaGCTTCCACAAACCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGYFISL*LPQTIH Trigger: GTGGATGGTTTGTGGAAGGCAGAGCGATATGAAGTA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCTTTTCAGCATCCTCTaGTACAGTAGACTGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGLFSIL*YSRLHC Trigger: ACAGTGCAGTCTACTGTACCAGAGGATGCTGAAAAG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033419.13 |
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| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGACTCAGCAATTCCATaGATGAGAGACTCAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGDSAIP*MRDSGE Trigger: TTCACCTGAGTCTCTCATCCATGGAATTGCTGAGTC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTGTCTTGAAGAGCAATaGAGGTTTCCCGCAGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGCLEEQ*RFPAEV Trigger: TACTTCTGCGGGAAACCTCCATTGCTCTTCAAGACA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCACAACTGCGCTATTTTaGCTTGCTGGTTCTTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGTTALF*LAGSCA Trigger: AGCACAAGAACCAGCAAGCCAAAATAGCGCAGTTGT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTACTTCCGCGTATCTTaGGGAACCATAACCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGYFRVS*GTITSV Trigger: AACAGAGGTTATGGTTCCCCAAGATACGCGGAAGTA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCTTCAGGGGCACATATaGAGAGGTAATACAATTTGG | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGLQGHI*RGNTIW Trigger: CCAAATTGTATTACCTCTTCATATGTGCCCCTGAAG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGTACAAGAATGTTTATaGGCTCCTGAGGAGACACTT | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGVQECL*APEETL Trigger: AAGTGTCTCCTCAGGAGCTCATAAACATTCTTGTAC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGTTGTTCTGTTTCTCTaGCATACTTCATCAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGVVLFL*HTSSVP Trigger: CGGAACTGATGAAGTATGGCAGAGAAACAGAACAAC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTGTCCAGGGATAATCTaGAATTTTGTCTTCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGCPGII*NFVFSG Trigger: GCCAGAGAAGACAAAATTGCAGATTATCCCTGGACA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGTCTGCTTCCGTTGTTaGAGAACTGTGATTAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGVCFRC*RTVIKC Trigger: ACACTTAATCACAGTTCTGCAACAACGGAAGCAGAC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTCTCTGCATAGCGAATaGTCACATGGGGAATTATTG | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGSLHSE*SHGELL Trigger: CAATAATTCCCCATGTGACCATTCGCTATGCAGAGA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAGCGCTTCAGAAAGCTaGCTAAGCTATAATTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGSASES*LSYNSH Trigger: ATGGGAATTATAGCTTAGCCAGCTTTCTGAAGCGCT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAGTTTTCCTCAGCTCTaGTGTGCTGGCATAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGSFPQL*CAGIRF Trigger: AAATCTTATGCCAGCACACCAGAGCTGAGGAAAACT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| 3UTR CAA 72 bp | ACAGATACAAGCACCCTGTATGAAAGCATGACGATTTaGGTGTCAGGAGGCAACACTCCACACATATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TDTSTLYESMTI*VSGGNTPHISN Trigger: ATTTGATATGTGTGGAGTGTTGCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGAAAAGTCTAATCTCTaGACCTCTGAGTCGAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGEKSNL*TSESKE Trigger: TTCTTTCGACTCAGAGGTTCAGAGATTAGACTTTTC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTGTCTTTATCGGATCTaGGTTTTTGATGTAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGCLYRI*VFDVGF Trigger: GAACCCTACATCAAAAACTCAGATCCGATAAAGACA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCATGACCATTTTGAAATaGCCCATAGGCTGTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGMTILK*PIGCVF Trigger: AAAGACACAGCCTATGGGTCATTTCAAAATGGTCAT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGTTGTTGCAGAACTGTaGTTAAGTGTGAATGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGVVAEL*LSVNEL Trigger: AAGCTCATTCACACTTAATCACAGTTCTGCAACAAC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTCCTTTGAAAAAGGCTaGGGGAAACTTACTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGSFEKG*GKLTDE Trigger: TTCATCAGTAAGTTTCCCTCAGCCTTTTTCAAAGGA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCACATCAGCTATTAGCTaGCTCACAGCAATGATTATC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGTSAIS*LTAMII Trigger: GATAATCATTGCTGTGAGTCAGCTAATAGCTGATGT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCACAGCAATGATTATCTaGAAGTGTGTCCTCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGTAMII*KCVLRK Trigger: CTTTCTGAGGACACACTTGCAGATAATCATTGCTGT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTATGAATTTTGGCCATaGTGTCAAGCCAAGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGYEFWP*CQAKFS Trigger: GGAAAACTTGGCTTGACAGCATGGCCAAAATTCATA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCATGGACATAACACATTaGAGCCTCAGAAAAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGMDITH*SLRKIS Trigger: GGAGATTTTTCTGAGGCTGCAATGTGTTATGTCCAT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTGCAACCTTGTTTCTTaGCTGATAATGTATATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGCNLVS*LIMYMG Trigger: CCCCATATACATTATCAGGCAAGAAACAAGGTTGCA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTCCAGACGATTATACTaGGATACACTACTCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGSRRLY*DTLLLE Trigger: TTCAAGGAGTAGTGTATCCCAGTATAATCGTCTGGA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCTATTCCAAAGTGTTTaGATAGCCAGGCATCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGLFQSV*IARHHV Trigger: TACATGATGCCTGGCTATCCAAACACTTTGGAATAG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTCAAGATTGGAATCTTaGACTCTCTGTAATTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGSRLES*TLCNLG Trigger: GCCTAAATTACAGAGAGTTCAAGATTCCAATCTTGA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033419.13 |
||
| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCCCATATATCGGAAGTaGAACAAACATACTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGPIYRK*NKHTSR Trigger: TCTAGAAGTATGTTTGTTTCACTTCCGATATATGGG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR TCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGGCATTTACCTTGTCTaGATCCTGAATTATTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGGIYLV*ILNYFD Trigger: GTCAAAATAATTCAGGATTCAGACAAGGTAAATGCC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCATATCCGCATTTGATTaGCTTCTTGATTCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGISAFD*LLDSAS Trigger: TGATGCTGAATCAAGAAGGCAATCAAATGCGGATAT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAACCTCATAGCAAAATaGAGCACACATGTTTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGNLIAK*STHVYS Trigger: AGAGTAAACATGTGTGCTGCATTTTGCTATGAGGTT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR GCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTCTTCTTGTAGTATCTaGTCATGGATAATGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGSSCSI*SWIMSD Trigger: GTCTGACATTATCCATGAGCAGATACTACAAGAAGA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTTGGATCAAGCTCTTTaGCATTTACCTTGTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGLDQAL*HLPCLN Trigger: ATTCAGACAAGGTAAATGCCAAAGAGCTTGATCCAA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTGTAGTATCTGCTCATaGATAATGTCAGACAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGCSICS*IMSDSS Trigger: AGAACTGTCTGACATTATCCATGAGCAGATACTACA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CCA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTTTTTATATGAATTTTaGCCATGCTGTCAAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTDTSTLYESMTILVSGGFLYEF*PCCQAK Trigger: CTTGGCTTGACAGCATGGCCAAAATTCATATAAAAA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGGCTTGCTCAGCCGCTaGGTGAATTTGCGCACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGGLLSR*VNLRTS Trigger: CGAAGTGCGCAAATTCACCAAGCGGCTGAGCAAGCC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033419.13 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCGCCTCAGGAAACCTTaGGCCCCTGGGGAGCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGRLRKP*APGELN Trigger: ATTAAGCTCCCCAGGGGCCAAAGGTTTCCTGAGGCG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAGGGGTTCAACTAACTaGGCCTTTTCCAGCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGRGSTN*AFSSTT Trigger: CGTGGTGCTGGAAAAGGCCAAGTTAGTTGAACCCCT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033419.13 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGTTCTCGGCTTTTCCTaGGCTGCTAGTTTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGVLGFS*AASFLL Trigger: GAGGAGGAAACTAGCAGCCAAGGAAAAGCCGAGAAC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGCTAATGGACCAGCATaGACCTGCACAGAGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGANGPA*TCTETQ Trigger: CTGTGTCTCTGTGCAGGTCAATGCTGGTCCATTAGC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS CCA 90 bp | AAACAAATCCTCTGTCCATCAGGGTCAAGCAGCGCTTCAGAAAGCTaGCTAAGCTATAATTCCCATTTCGGGACTCATCAGGAATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KQILCPSGSSSASES*LSYNSHFGTHQESL Trigger: CAGAGATTCCTGATGAGTCCCGAAATGGGAATTATAGCTTAGCCAGCTTTCTGAAGCGCTGCTTGACCCTGATGGACAGAGGATTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGCTAGTTTCCTCCTCTaGTATTGCCTCGACTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGASFLL*YCLDCV Trigger: GACACAGTCGAGGCAATACAAGAGGAGGAAACTAGC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGCAATGTTCCTAGCCTaGGCAAACGATTTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGAMFLA*ANDFWL Trigger: CAGCCAGAAATCGTTTGCCAAGGCTAGGAACATTGC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCTGCGCTATTTTGGCTaGCTGGTTCTTGTGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGLRYFG*LVLVLV Trigger: TACCAGCACAAGAACCAGCAAGCCAAAATAGCGCAG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCAGGTGAAAAGCCCTTaGCATTCCCATCATTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGQVKSP*HSHHWT Trigger: TGTCCAATGATGGGAATGCAAAGGGCTTTTCACCTG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAAGGCGACTACACACTaGTTTAGCTGTCCTGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGKATTH*FSCPVY Trigger: GTACACAGGACAGCTAAACAAGTGTGTAGTCGCCTT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCATAGAACTCCGGATTTaGGTTGTGATGCGAGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGIELRI*VVMRDH Trigger: GTGGTCTCGCATCACAACCAAAATCCGGAGTTCTAT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGCACCATCTACCCACTaGATATCCGCATTTGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGAPSTH*ISAFDC Trigger: GCAATCAAATGCGGATATCAAGTGGGTAGATGGTGC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTACAACTGCGCTATTTaGGCTTGCTGGTTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGYNCAI*ACWFLC Trigger: GCACAAGAACCAGCAAGCCAAAATAGCGCAGTTGTA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAAAAGGGCTCAACATTaGTGGGTGGTCCTTTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGKRAQH*WVVLLH Trigger: ATGCAAAAGGACCACCCACAAATGTTGAGCCCTTTT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTTGGCTTGCTGGTTCTaGTGCTGGTATCTAGTATCA | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGLACWF*CWYLVS Trigger: TGATACTAGATACCAGCACAAGAACCAGCAAGCCAA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAGGCATCATGTACCCTaGCTATGTTTCTTTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGRHHVP*LCFFSP Trigger: TGGGGAAAAGAAACATAGCAAGGGTACATGATGCCT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS CCA 90 bp | TATAATTCCCATTTCGGGACTCATCAGGAATCTCTGCATAGCGAATaGTCACATGGGGAATTATTGCAAGGAGCAGAGAATGTAAGACGT | + |
|
Preference number: 5 (lower is better) Translates to: YNSHFGTHQESLHSE*SHGELLQGAENVRR Trigger: ACGTCTTACATTCTCTGCTCCTTGCAATAATTCCCCATGTGACCATTCGCTATGCAGAGATTCCTGATGAGTCCCGAAATGGGAATTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTCAAATAAGGCGAGGTaGATGAAAAAGGGCTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGSNKAR*MKKGST Trigger: TGTTGAGCCCTTTTTCATCAACCTCGCCTTATTTGA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
||
| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGTCTTCTCTGGCTTTTaGTATTCTGAGAGCAACTTG | + |
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Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGVFSGF*YSESNL Trigger: CAAGTTGCTCTCAGAATACAAAAAGCCAGAGAAGAC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTCACATGGGGAATTATaGCAAGGAGCAGAGAATGTA | + |
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Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGSHGEL*QGAENV Trigger: TACATTCTCTGCTCCTTGCAATAATTCCCCATGTGA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGATCTCATAGTTGTCTaGAAGAGCAATGGAGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGDLIVV*KSNGGF Trigger: GAAACCTCCATTGCTCTTCAAGACAACTATGAGATC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTCTATTCCAAAGTGTTaGGATAGCCAGGCATCATGT | + |
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Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGSIPKC*DSQASC Trigger: ACATGATGCCTGGCTATCCAAACACTTTGGAATAGA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAAGATAGTACGACGCTaGCACTGTTCTTCAATGCAA | + |
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Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGKIVRR*HCSSMQ Trigger: TTGCATTGAAGAACAGTGCAAGCGTCGTACTATCTT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGTCTTAATACACTCTTaGACAAATAAACTCTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGVLIHS*TNKLWA Trigger: GGCCCAGAGTTTATTTGTCAAAGAGTGTATTAAGAC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033419.13 |
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| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCTTTGGATCAAGCTCTTaGGCATTTACCTTGTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGFGSSS*AFTLSE Trigger: TTCAGACAAGGTAAATGCCAAAGAGCTTGATCCAAA...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGTATATGAGCGAATTTaGGATCAAGCTCTTTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGVYERI*DQALWH Trigger: ATGCCAAAGAGCTTGATCCAAAATTCGCTCATATAC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCGATCTGGGTTTTCCGTaGAGTGATAACATTTTCATA | + |
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Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGDLGFP*SDNIFI Trigger: TATGAAAATGTTATCACTCAACGGAAAACCCAGATC...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033419.13 |
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| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCAAGCTTGCTACTGTCTaGTTTATACAAAGGGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGKLATV*FIQRGK Trigger: TTTTCCCCTTTGTATAAACAAGACAGTAGCAAGCTT...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS-3UTR CAA 90 bp | TTTACAGATACAAGCACCCTGTATGAAAGCATGACGATTTTGGTGTCAGGAGGCCATTTGATTGCCTTCTaGATTCAGCATCATTCACAT | + |
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Preference number: 5 (lower is better) Translates to: FTDTSTLYESMTILVSGGHLIAF*IQHHSH Trigger: ATGTGAATGATGCTGAATCAAGAAGGCAATCAAATG...GCCTCCTGACACCAAAATCGTCATGCTTTCATACAGGGTGCTTGTATCTGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS CCA 72 bp | AGCACCACGGAGCCCCGCACGGCCTCCGACACGCTCTaGCGGAGCTCGGCTGCCGTGCCTGGCTTGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: STTEPRTASDTL*RSSAAVPGLLS Trigger: GCTGAGCAAGCCAGGCACGGCAGCCGAGCTCCGCCAGAGCGTGTCGGAGGCCGTGCGGGGCTCCGTGGTGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033419.13 |
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| CDS TCA 72 bp | GGAATTATTGCAAGGAGCAGAGAATGTAAGACGTGGTaGTACGCCTCAGGAAACCTTTGGCCCCTGGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GIIARSRECKTW*YASGNLWPLGS Trigger: GCTCCCCAGGGGCCAAAGGTTTCCTGAGGCGTATCACCACGTCTTACATTCTCTGCTCCTTGCAATAATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS CCA 72 bp | CTCTGTCCATCAGGGTCAAGCAGCGCTTCAGAAAGCTaGCTAAGCTATAATTCCCATTTCGGGACTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: LCPSGSSSASES*LSYNSHFGTHQ Trigger: CTGATGAGTCCCGAAATGGGAATTATAGCTTAGCCAGCTTTCTGAAGCGCTGCTTGACCCTGATGGACAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS CAA 72 bp | GTTCTCGGCTTTTCCTTGGCTGCTAGTTTCCTCCTCTaGTATTGCCTCGACTGTGTCCTTTTTCTCTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: VLGFSLAASFLL*YCLDCVLFLLH Trigger: GTGCAAGAGAAAAAGGACACAGTCGAGGCAATACAAGAGGAGGAAACTAGCAGCCAAGGAAAAGCCGAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS CAA 90 bp | ACTCATCAGGAATCTCTGCATAGCGAATGGTCACATGGGGAATTATaGCAAGGAGCAGAGAATGTAAGACGTGGTGATACGCCTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: THQESLHSEWSHGEL*QGAENVRRGDTPQE Trigger: TTCCTGAGGCGTATCACCACGTCTTACATTCTCTGCTCCTTGCAATAATTCCCCATGTGACCATTCGCTATGCAGAGATTCCTGATGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS CCA 72 bp | CATTTCGGGACTCATCAGGAATCTCTGCATAGCGAATaGTCACATGGGGAATTATTGCAAGGAGCAGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: HFGTHQESLHSE*SHGELLQGAEN Trigger: ATTCTCTGCTCCTTGCAATAATTCCCCATGTGACCATTCGCTATGCAGAGATTCCTGATGAGTCCCGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS CAA 72 bp | GAATCTCTGCATAGCGAATGGTCACATGGGGAATTATaGCAAGGAGCAGAGAATGTAAGACGTGGTGATACG | + |
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Preference number: 6 (lower is better) Translates to: ESLHSEWSHGEL*QGAENVRRGDT Trigger: CGTATCACCACGTCTTACATTCTCTGCTCCTTGCAATAATTCCCCATGTGACCATTCGCTATGCAGAGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS GCA 72 bp | GCTATAATTCCCATTTCGGGACTCATCAGGAATCTCTaGATAGCGAATGGTCACATGGGGAATTATTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: AIIPISGLIRNL*IANGHMGNYCK Trigger: CTTGCAATAATTCCCCATGTGACCATTCGCTATGCAGAGATTCCTGATGAGTCCCGAAATGGGAATTATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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| CDS TCA 72 bp | TTAGTGCTACATCAGCTATTAGCTGACTCACAGCAATaGTTATCTGCAAGTGTGTCCTCAGAAAGGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LVLHQLLADSQQ*LSASVSSERFS Trigger: GGAAAACCTTTCTGAGGACACACTTGCAGATAATCATTGCTGTGAGTCAGCTAATAGCTGATGTAGCACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033419.13 ENSMUST00000115264.2 ENSMUST00000115266.8 |
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| CDS GCA 72 bp | CATTCCACTGTGATACTCAGCTGTCCAGGGATAATCTaGAATTTTGTCTTCTCTGGCTTTTTGTATTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: HSTVILSCPGII*NFVFSGFLYSE Trigger: CTCAGAATACAAAAAGCCAGAGAAGACAAAATTGCAGATTATCCCTGGACAGCTGAGTATCACAGTGGAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033419.13 ENSMUST00000115266.8 |
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