RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DOCK1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058325

Ensembl transcript IDs: ENSMUST00000084488.5, ENSMUST00000210121.2, ENSMUST00000211593.2

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGACCCGCTGGAGTAAGCAAGGGTGACAGACACTCACCGGAGCTCTaGGAACCACCGTATATACAAATATTCTGTACACACAGAGAAGCC +
Preference number: 1 (lower is better)
Translates to: RPAGVSKGDRHSPEL*EPPYIQIFCTHREA
Trigger: GGCTTCTCTGTGTGTACAGAATATTTGTATATACGGTGGTTCTCAGAGCTCCGGTGAGTGTCTGTCACCCTTGCTTACTCCAGCGGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
3UTR TCA 90 bp AAGGAAACAATAACAATACAAAGTATGCCAGTAAACTCAGAGTTTTaGGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAAA +
Preference number: 1 (lower is better)
Translates to: KETITIQSMPVNSEF*VEKRMVIGQSHSGK
Trigger: TTTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAGTTTACTGGCATACTTTGTATTGTTATTGTTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
3UTR-3UTR TCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGTCCCTCCCGCTTGGCTaGCTCACACTGGACAAGCTC +
Preference number: 2 (lower is better)
Translates to: VTLHPRSHTADISRIGVESLPLG*LTLDKL
Trigger: GAGCTTGTCCAGTGTGAGTCAGCCAAGCGGGAGGGA...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
3UTR-3UTR TCA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTCCATTCCCACTGTGCTaGGACACTTCAGGCCTCTGG +
Preference number: 2 (lower is better)
Translates to: KGKSFRARLRLSERLTCSPFPLC*DTSGLW
Trigger: CCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGG...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
3UTR-3UTR TCA 90 bp GGGCTGCGATGTGACAGGGAGCAGCATCCATACATCAGCTTCATCGAACATAAGAGTCACAGTGGAAAATaGTTGCAAACATCGGAGAAT +
Preference number: 2 (lower is better)
Translates to: GLRCDREQHPYISFIEHKSHSGK*LQTSEN
Trigger: ATTCTCCGATGTTTGCAATCATTTTCCACTGTGACT...CTTATGTTCGATGAAGCTGATGTATGGATGCTGCTCCCTGTCACATCGCAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
3UTR-3UTR TCA 90 bp GGCTGCGATGTGACAGGGAGCAGCATCCATACATCAGCTTCATCGAACATAAGCGATAAATGGAAGGTGTaGAGGAGAACGTGGATTTAT +
Preference number: 2 (lower is better)
Translates to: GCDVTGSSIHTSASSNISDKWKV*RRTWIY
Trigger: ATAAATCCACGTTCTCCTTCACACCTTCCATTTATC...GCTTATGTTCGATGAAGCTGATGTATGGATGCTGCTCCCTGTCACATCGCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210121.2
ENSMUST00000211593.2
3UTR CAA 90 bp GAAGGAAACAATAACAATACAAAGTATGCCAGTAAACTCAGAGTTTaGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: EGNNNNTKYASKLRV*SGETYGHRPKSQWK
Trigger: TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAGTTTACTGGCATACTTTGTATTGTTATTGTTTCCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
3UTR-3UTR GCA 90 bp TCAAAGATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGACAGTGGAAAATGATTaGAAACATCGGAGAATAAAG +
Preference number: 2 (lower is better)
Translates to: SKINGRCEGERGFIPKCKTVEND*KHRRIK
Trigger: CTTTATTCTCCGATGTTTGCAATCATTTTCCACTGT...CTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTATCTTTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
3UTR-3UTR CAA 90 bp CTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGGCTGACTCAGACTATGTATGACTaGGCTCCATTCCCACTGTGC +
Preference number: 3 (lower is better)
Translates to: LLTGVGLGVCLIPPAWLTQTMYD*APFPLC
Trigger: GCACAGTGGGAATGGAGCCAAGTCATACATAGTCTG...AGTCAGCCAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
3UTR CCA 72 bp CCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTaGCTAGGATGGACCTCTTTCCAAGAAAAGCCAATC +
Preference number: 3 (lower is better)
Translates to: PTVLRHFRPLVP*LGWTSFQEKPI
Trigger: GATTGGCTTTTCTTGGAAAGAGGTCCATCCTAGCCACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
3UTR CCA 72 bp GGTTTGCCTCATCCCTCCCGCTTGGCTGACTCACACTaGACAAGCTCTCTGCAAATGAATATAAGTCATTTG +
Preference number: 3 (lower is better)
Translates to: GLPHPSRLADSH*TSSLQMNISHL
Trigger: CAAATGACTTATATTCATTTGCAGAGAGCTTGTCCAGTGTGAGTCAGCCAAGCGGGAGGGATGAGGCAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
3UTR TCA 72 bp GGAGTAAGCAAGGGTGACAGACACTCACCGGAGCTCTaGGAACCACCGTATATACAAATATTCTGTACACAC +
Preference number: 3 (lower is better)
Translates to: GVSKGDRHSPEL*EPPYIQIFCTH
Trigger: GTGTGTACAGAATATTTGTATATACGGTGGTTCTCAGAGCTCCGGTGAGTGTCTGTCACCCTTGCTTACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
3UTR CCA 72 bp AACAAATATTTCCAGCAGTTAAACATGAAGACACACTaGAGCTCGTTTTCAGAGACCCGCTGGAGTAAGCAA +
Preference number: 3 (lower is better)
Translates to: NKYFQQLNMKTH*SSFSETRWSKQ
Trigger: TTGCTTACTCCAGCGGGTCTCTGAAAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp ACTAAGGCGAAGCATCCCAGGGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATAGGCCAGCGATGGGGTaGCTGCAAACTTGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: TKAKHPRARRRSSAGTADRPAMG*LQTWLV
Trigger: GACAAGCCAAGTTTGCAGCCACCCCATCGCTGGCCT...ATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCCCTGGGATGCTTCGCCTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp ACTAAGGCGAAGCATCCCAGGGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATCATCAGAGCCTGGCCTaGAAGGAGTGCTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TKAKHPRARRRSSAGTADHQSLA*KECCQR
Trigger: CCTCTGACAGCACTCCTTCCAGGCCAGGCTCTGATG...ATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCCCTGGGATGCTTCGCCTTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp GGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTTCAGCTTCCTCGTGTTaGTGTCCCTCAGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: GPEEVIGRHGRCRREAGGSASSC*CPSAPC
Trigger: GCATGGAGCTGAGGGACAGCAACACGAGGAAGCTGA...ACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp GGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTTTGAACGTGGACGGCTaGCTCTCCTGTCATCCAAGC +
Preference number: 4 (lower is better)
Translates to: GPEEVIGRHGRCRREAGGLNVDG*LSCHPS
Trigger: GCTTGGATGACAGGAGAGGCAGCCGTCCACGTTCAA...ACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp CTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGGCTAGGATGACAGCCTCAGACTGCTaGAGGGAGCTGTCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: LHSHCAETLQASGPVARMTASDC*RELSAG
Trigger: GCCCGCTGACAGCTCCCTGCAGCAGTCTGAGGCTGT...CATCCTAGCCACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp TGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGACTGGAGGGGGCGTCTaGTGGGAGGACGGTGATGCT +
Preference number: 4 (lower is better)
Translates to: CIASHGSRARGLPHPSRLTGGGV*WEDGDA
Trigger: AGCATCACCGTCCTCCCAGCAGACGCCCCCTCCAGT...CAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp ACTAAGGCGAAGCATCCCAGGGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATATCTATGGCGGAAGGTaGATCGAAGGTGACTCCGGT +
Preference number: 4 (lower is better)
Translates to: TKAKHPRARRRSSAGTADIYGGR*IEGDSG
Trigger: ACCGGAGTCACCTTCGATTCACCTTCCGCCATAGAT...ATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCCCTGGGATGCTTCGCCTTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp CTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGGCTAGGATGTGTACAGCTGCTCGTTaGCTCCCGGCTTCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: LHSHCAETLQASGPVARMCTAAR*LPASLR
Trigger: GCGCAGAGAAGCCGGGAGTCAACGAGCAGCTGTACA...CATCCTAGCCACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp ACTAAGGCGAAGCATCCCAGGGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATTGGCAAAACCACCCATaGCAGCAGGATCCACAATGC +
Preference number: 4 (lower is better)
Translates to: TKAKHPRARRRSSAGTADWQNHP*QQDPQC
Trigger: GCATTGTGGATCCTGCTGTCATGGGTGGTTTTGCCA...ATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCCCTGGGATGCTTCGCCTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp ATGACTTGGCTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGGCTTGGCTCTTGGTGTaGCTGGAGGGGGCGTCTGCT +
Preference number: 4 (lower is better)
Translates to: MTWLHSHCAETLQASGPVAWLLV*LEGASA
Trigger: AGCAGACGCCCCCTCCAGTCACACCAAGAGCCAAGC...CACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAGCCAAGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp ACTAAGGCGAAGCATCCCAGGGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATTTGAGCTTCTCAATCTaGCCATGGGCCTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: TKAKHPRARRRSSAGTADLSFSI*PWASGC
Trigger: GCATCCTGAGGCCCATGGGCAGATTGAGAAGCTCAA...ATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCCCTGGGATGCTTCGCCTTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp CTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGGCTGACTTGGCTCTTGGGTCTTTaGGGCCGCAGGGGACTTATC +
Preference number: 4 (lower is better)
Translates to: LLTGVGLGVCLIPPAWLTWLLGL*GRRGLI
Trigger: GATAAGTCCCCTGCGGCCCCAAAGACCCAAGAGCCA...AGTCAGCCAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp AGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTTAGCCTTGAGGGGCAGAGGGGGTaGGACATCGGCCACATCCAT +
Preference number: 4 (lower is better)
Translates to: RRSSAGTADVGEKQEVSLEGQRG*DIGHIH
Trigger: ATGGATGTGGCCGATGTCCCACCCCCTCTGCCCCTC...AAGGCTAACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp GGCTACTGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCAGTTGCAGGGACTCTTaGGTGAGGAAAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: GYCIASHGSRARGLPHPSSCRDS*VRKATA
Trigger: GGCCGTGGCTTTCCTCACTCAAGAGTCCCTGCAACT...GGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCAGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp CTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGGCTGACTGACTCTGCATTCCTTTaGCTGTGGCTGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLTGVGLGVCLIPPAWLTDSAFL*LWLSGP
Trigger: AGGGCCACTCAGCCACAGGCAAAGGAATGCAGAGTC...AGTCAGCCAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp GGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTTTGGCGAGGTATTTATaGTTCCTGCAGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPEEVIGRHGRCRREAGGLARYL*FLQCSR
Trigger: CCTGGAGCACTGCAGGAAGCATAAATACCTCGCCAA...ACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp AGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTTAGCCTTTGCGGGCCACAGCTGTaGTCCTGTCCACCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: RRSSAGTADVGEKQEVSLCGPQL*SCPPSE
Trigger: CTCACTTGGTGGACAGGACCACAGCTGTGGCCCGCA...AAGGCTAACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp ACTAAGGCGAAGCATCCCAGGGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATTTGTCTAGCTTGTCCTaGGACCTGGAGTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: TKAKHPRARRRSSAGTADLSSLS*DLECIF
Trigger: GAAGATGCACTCCAGGTCCCAGGACAAGCTAGACAA...ATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCCCTGGGATGCTTCGCCTTAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp ACTAAGGCGAAGCATCCCAGGGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATAACTCCTTCCGAATCTaGTGGATGTCTCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TKAKHPRARRRSSAGTADNSFRI*WMSPGS
Trigger: ACTTCCTGGAGACATCCATCAGATTCGGAAGGAGTT...ATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCCCTGGGATGCTTCGCCTTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp TGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGCCTGACTGTGAGCTCTaGCAGGCTGCTCATCATGTC +
Preference number: 4 (lower is better)
Translates to: CIASHGSRARGLPHPSRLPDCEL*QAAHHV
Trigger: GACATGATGAGCAGCCTGTCAGAGCTCACAGTCAGG...CAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp AGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTTAGCCTTCTGCTGGGAGGACGGTaGTGCTGGAGACACAGAGAA +
Preference number: 4 (lower is better)
Translates to: RRSSAGTADVGEKQEVSLLLGGR*CWRHRE
Trigger: TTCTCTGTGTCTCCAGCATCACCGTCCTCCCAGCAG...AAGGCTAACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp GGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTCCATCTGCCGTAAAATaGCTGTCATGCAAGCCACAA +
Preference number: 4 (lower is better)
Translates to: GPEEVIGRHGRCRREAGGPSAVK*LSCKPQ
Trigger: TTGTGGCTTGCATGACAGCCATTTTACGGCAGATGG...ACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp CTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGGCTAGGATGGCTTGTCCTGGGACCTaGAGTGCATCTTCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: LHSHCAETLQASGPVARMACPGT*SASSSA
Trigger: TGCCGAAGAAGATGCACTCCAGGTCCCAGGACAAGC...CATCCTAGCCACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
3UTR CAA 72 bp TACTGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTaGCCTCATCCCTCCCGCTTGGCTGACTCACACTGG +
Preference number: 4 (lower is better)
Translates to: YCIASHGSRARG*PHPSRLADSHW
Trigger: CCAGTGTGAGTCAGCCAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
3UTR CAA 72 bp GAGCAGTCAGCCCTTGGGGGTGAGCTAGAGTCTGGGTaGGAGAGGCCGAGTGAGGATCCTTACAAGGCTACT +
Preference number: 4 (lower is better)
Translates to: EQSALGGELESG*ERPSEDPYKAT
Trigger: AGTAGCCTTGTAAGGATCCTCACTCGGCCTCTCCAACCCAGACTCTAGCTCACCCCCAAGGGCTGACTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp GGCTACTGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCTCCTTTGCCTGTGGCTaGGTGGCCCTTTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: GYCIASHGSRARGLPHPSSFACG*VALFFQ
Trigger: TTGGAAGAAAAGGGCCACTCAGCCACAGGCAAAGGA...GGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCAGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp CTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGGCTGACTGCATCCAAGGTGTCCTaGAGGAACTTCACCACTTCA +
Preference number: 4 (lower is better)
Translates to: LLTGVGLGVCLIPPAWLTASKVS*RNFTTS
Trigger: TGAAGTGGTGAAGTTCCTTCAGGACACCTTGGATGC...AGTCAGCCAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp CTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGGCTAGGATGTCTCCAGGTGGTACTTaGGCTGGTCTGTCATCATGG +
Preference number: 4 (lower is better)
Translates to: LHSHCAETLQASGPVARMSPGGT*AGLSSW
Trigger: CCATGATGACAGACCAGCTCAAGTACCACCTGGAGA...CATCCTAGCCACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp AGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTTAGCCTTAGCTCCAGACTGGGCTaGATGCTGAAGCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RRSSAGTADVGEKQEVSLSSRLG*MLKLSL
Trigger: CAAGCTCAGCTTCAGCATTCAGCCCAGTCTGGAGCT...AAGGCTAACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp CTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGGCTAGGATGATGGCTTTGTACAGCTaGTCGTTGACTCCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: LHSHCAETLQASGPVARMMALYS*SLTPGF
Trigger: GAAGCCGGGAGTCAACGAGCAGCTGTACAAAGCCAT...CATCCTAGCCACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp GGCTACTGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCGCCTCAGGATGCTCCTaGAGGTATCTGTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GYCIASHGSRARGLPHPSASGCS*RYLSVK
Trigger: CTTCACAGACAGATACCTGCAGGAGCATCCTGAGGC...GGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCAGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp TGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGAGGCTATCAGGTCCTTaGGCTTCTCAATCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: CIASHGSRARGLPHPSRLRLSGP*ASQSAH
Trigger: ATGGGCAGATTGAGAAGCTCAAGGACCTGATAGCCT...CAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp CTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGGCTGACTTCCACCTTCATCAACTaGCTCAAGTTCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LLTGVGLGVCLIPPAWLTSTFIN*LKFCCR
Trigger: TCTGCAGCAGAACTTGAGGCAGTTGATGAAGGTGGA...AGTCAGCCAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp ATGACTTGGCTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGTCATCCAGGTGCTGCTaGACCATGCTGCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: MTWLHSHCAETLQASGPVSSRCC*TMLLIL
Trigger: CAAGATCAGCAGCATGGTCCAGCAGCACCTGGATGA...CACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAGCCAAGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGGGAGGTCCCCAGGGATaGCGGTTTCATGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVEGGPQG*RFHVAL
Trigger: AAGGGCAACATGAAACCGTCATCCCTGGGGACCTCC...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp ACTAAGGCGAAGCATCCCAGGGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATACTTGGCTTGTCTGTTaGTATCCATGTTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TKAKHPRARRRSSAGTADTWLVC*YPCSAF
Trigger: AAAAGCAGAACATGGATATCAACAGACAAGCCAAGT...ATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCCCTGGGATGCTTCGCCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGATCTGGACGTGCCTCTaGGTCGGTCCCACATCCTTC +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVEIWTCL*VGPTSF
Trigger: GAAGGATGTGGGACCGACTCAGAGGCACGTCCAGAT...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp ATGACTTGGCTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGGTGACTTTGTCTCCATaGATCCTGATCCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: MTWLHSHCAETLQASGPVVTLSP*ILIPSA
Trigger: GGCTGAAGGGATCAGGATTCATGGAGACAAAGTCAC...CACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAGCCAAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp CTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGGCTAGGATGGTTCCAGAAAGGATCTaGGACCGCCATTCAATAAGG +
Preference number: 4 (lower is better)
Translates to: LHSHCAETLQASGPVARMVPERI*DRHSIR
Trigger: CCTTATTGAATGGCGGTCGCAGATCCTTTCTGGAAC...CATCCTAGCCACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp GGCTACTGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCATCTCTCTGCAGTCATaGTGTGTGAAGAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: GYCIASHGSRARGLPHPSISLQS*CVKRSL
Trigger: CAGTGACCTCTTCACACAGCATGACTGCAGAGAGAT...GGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCAGTAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp TGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGATTGCTCGTCTCCTCTaGCTCCTTCCACTTCATGAT +
Preference number: 4 (lower is better)
Translates to: CIASHGSRARGLPHPSRLIARLL*LLPLHD
Trigger: ATCATGAAGTGGAAGGAGGCAGAGGAGACGAGCAAT...CAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGGAGGAGGTGGTGTTTTaGTGGGCAGTGGAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVEEEVVF*WAVEVA
Trigger: AGCCACCTCCACTGCCCAGCAAAACACCACCTCCTC...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp ATGACTTGGCTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGTCTTTGAGCTCATCCTaGGGCAGAGTTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: MTWLHSHCAETLQASGPVSLSSS*GRVPER
Trigger: CCTTTCTGGAACTCTGCCCCAGGATGAGCTCAAAGA...CACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAGCCAAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp GGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTTTTCAGATTTATCCTTaGAGTCCTGCGAGGATCTAT +
Preference number: 4 (lower is better)
Translates to: GPEEVIGRHGRCRREAGGFQIYP*SPARIY
Trigger: ATAGATCCTCGCAGGACTCCAAGGATAAATCTGAAA...ACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp CTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGGCTGACTACTCCAAGGCTTTTATaGCTTTGTACAGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: LLTGVGLGVCLIPPAWLTTPRLL*LCTAAR
Trigger: ACGAGCAGCTGTACAAAGCCATAAAAGCCTTGGAGT...AGTCAGCCAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp CTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGGCTGACTTCCATGTTCTGCTTTTaGGATTTCTCCTCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LLTGVGLGVCLIPPAWLTSMFCF*DFSSCS
Trigger: ACTGCAAGAGGAGAAATCTCAAAAGCAGAACATGGA...AGTCAGCCAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp GGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTCAACCATTTCTGGGATaGATTTTATCTTGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: GPEEVIGRHGRCRREAGGQPFLG*ILSCVD
Trigger: GTCAACACAAGATAAAATTCATCCCAGAAATGGTTG...ACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp CTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGGCTAGGATGTCATTTTCAAACATTTaGAAGCTCCGGGTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LHSHCAETLQASGPVARMSFSNI*KLRVEW
Trigger: CCACTCCACCCGGAGCTTTCAAATGTTTGAAAATGA...CATCCTAGCCACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp TGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGTCAGCATTTGGAAACTaGGTTAACAGCCGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: CIASHGSRARGLPHPSRLSAFGN*VNSRAS
Trigger: TGAAGCTCGGCTGTTAACTCAGTTTCCAAATGCTGA...CAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp AGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTTAGCCTTAGAAGCAACTTCGTGTaGTCGGAAGAGACTGATGGT +
Preference number: 4 (lower is better)
Translates to: RRSSAGTADVGEKQEVSLRSNFV*SEETDG
Trigger: ACCATCAGTCTCTTCCGAGCACACGAAGTTGCTTCT...AAGGCTAACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTCCCGGGTCATCCAGGTaGTGCTGGACCATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KGKSFRARLRLSERLTCSPGSSR*CWTMLL
Trigger: CAGCAGCATGGTCCAGCAGCACCTGGATGACCCGGG...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGTCCTGGGACCTGGAGTaGATCTTCTTCGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVESWDLE*IFFGSR
Trigger: TCTGCTGCCGAAGAAGATGCACTCCAGGTCCCAGGA...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGCCCCGTCTCTCAGGGTaGTCCCATCGTATCTCATCA +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVEPRLSG*SHRISS
Trigger: TGATGAGATACGATGGGACCACCCTGAGAGACGGGG...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp GGGCTGCGATGTGACAGGGAGCAGCATCCATACATCAGCTTCATCGAACATAAGCCCCGTCTCTCAGGGTaGTCCCATCGTATCTCATCA +
Preference number: 4 (lower is better)
Translates to: GLRCDREQHPYISFIEHKPRLSG*SHRISS
Trigger: TGATGAGATACGATGGGACCACCCTGAGAGACGGGG...CTTATGTTCGATGAAGCTGATGTATGGATGCTGCTCCCTGTCACATCGCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp GGCTGCGATGTGACAGGGAGCAGCATCCATACATCAGCTTCATCGAACATAAGCGTCCTGTCCACCAAGTaGGGAAACTCCTTCCGAATC +
Preference number: 4 (lower is better)
Translates to: GCDVTGSSIHTSASSNISVLSTK*GNSFRI
Trigger: GATTCGGAAGGAGTTTCCTCACTTGGTGGACAGGAC...GCTTATGTTCGATGAAGCTGATGTATGGATGCTGCTCCCTGTCACATCGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp GGCTGCGATGTGACAGGGAGCAGCATCCATACATCAGCTTCATCGAACATAAGCATCTATGGCGGAAGGTaGATCGAAGGTGACTCCGGT +
Preference number: 4 (lower is better)
Translates to: GCDVTGSSIHTSASSNISIYGGR*IEGDSG
Trigger: ACCGGAGTCACCTTCGATTCACCTTCCGCCATAGAT...GCTTATGTTCGATGAAGCTGATGTATGGATGCTGCTCCCTGTCACATCGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTGCAGGGACTCTTGAGTaGGGAAAGCCACGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KGKSFRARLRLSERLTCSAGTLE*GKPRPG
Trigger: ACCTGGCCGTGGCTTTCCTCACTCAAGAGTCCCTGC...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp CTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGGCTAGGATGGGTCTTGATCAGGTGTaGATAATGGTAGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LHSHCAETLQASGPVARMGLDQV*IMVVFH
Trigger: ATGGAAGACTACCATTATGCACACCTGATCAAGACC...CATCCTAGCCACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp AGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTTAGCCTTCAGATTTCCATAATCTaGCATGTTGCCTTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: RRSSAGTADVGEKQEVSLQISII*HVAFEG
Trigger: CCCCTCAAAGGCAACATGGCAGATTATGGAAATCTG...AAGGCTAACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp CAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTATAGGGGGCTCATATTTTACTTCTCCTCTCGCTTaGTGGGGACCCAGCGCGTCA +
Preference number: 4 (lower is better)
Translates to: QRSHPIKTTSGGIGGSYFTSPLA*WGPSAS
Trigger: TGACGCGCTGGGTCCCCACCAAGCGAGAGGAGAAGT...AAAATATGAGCCCCCTATACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp ATGACTTGGCTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGACCAGAGTGGAGATCTaGAAAGAGTCTTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: MTWLHSHCAETLQASGPVTRVEI*KESLLM
Trigger: CATCAGCAAAGACTCTTTCCAGATCTCCACTCTGGT...CACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAGCCAAGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp GGCTACTGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCTTGTTTATGACAGTTTaGAGGAAGTCATTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GYCIASHGSRARGLPHPSLFMTV*RKSFSP
Trigger: AGGGGAGAATGACTTCCTTCAAACTGTCATAAACAA...GGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCAGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp GGCTGCGATGTGACAGGGAGCAGCATCCATACATCAGCTTCATCGAACATAAGCGCATCCAAGGTGTCCTaGAGGAACTTCACCACTTCA +
Preference number: 4 (lower is better)
Translates to: GCDVTGSSIHTSASSNISASKVS*RNFTTS
Trigger: TGAAGTGGTGAAGTTCCTTCAGGACACCTTGGATGC...GCTTATGTTCGATGAAGCTGATGTATGGATGCTGCTCCCTGTCACATCGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210121.2
ENSMUST00000211593.2
CDS-3UTR CCA 90 bp CAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTATAGGGGGCTCATATTTTTCCCCTGCCACCGCCTaGAAGGGGATGAAATGCTGT +
Preference number: 4 (lower is better)
Translates to: QRSHPIKTTSGGIGGSYFSPATA*KGMKCC
Trigger: ACAGCATTTCATCCCCTTCCAGGCGGTGGCAGGGGA...AAAATATGAGCCCCCTATACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp TGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGTGTCATTTCCAATATTaGGCCAACCATTTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: CIASHGSRARGLPHPSRLCHFQY*ANHFWD
Trigger: ATCCCAGAAATGGTTGGCCCAATATTGGAAATGACA...CAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp AGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTTAGCCTTAAGTTTCTCCTGTCTTaGCGAGGTATTTATGCTTCC +
Preference number: 4 (lower is better)
Translates to: RRSSAGTADVGEKQEVSLKFLLS*RGIYAS
Trigger: GGAAGCATAAATACCTCGCCAAGACAGGAGAAACTT...AAGGCTAACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGACGGTGTCTCCAATTTaGAGGGACAGTTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVETVSPI*RDSSSA
Trigger: AGCAGATGAACTGTCCCTTCAAATTGGAGACACCGT...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp GGGCTGCGATGTGACAGGGAGCAGCATCCATACATCAGCTTCATCGAACATAAGACGGTGTCTCCAATTTaGAGGGACAGTTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GLRCDREQHPYISFIEHKTVSPI*RDSSSA
Trigger: AGCAGATGAACTGTCCCTTCAAATTGGAGACACCGT...CTTATGTTCGATGAAGCTGATGTATGGATGCTGCTCCCTGTCACATCGCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp AAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTTCAGAGACCACCCGTCCCGCTGAGTaGGGTGAGCTGCACACACGT +
Preference number: 4 (lower is better)
Translates to: KYFQQLNMKTHWSSFSETTRPAE*GELHTR
Trigger: ACGTGTGTGCAGCTCACCTCACTCAGCGGGACGGGT...GGTCTCTGAAAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp CTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGGCTAGGATGTTTTCAGCAATTCACTaGGCTGCTCATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: LHSHCAETLQASGPVARMFSAIH*AAHNQT
Trigger: TGTTTGATTATGAGCAGCTCAGTGAATTGCTGAAAA...CATCCTAGCCACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTGCTTGGGCTTCACTGTaGAGCACTGGATGTACTGGC +
Preference number: 4 (lower is better)
Translates to: KGKSFRARLRLSERLTCSAWASL*STGCTG
Trigger: GCCAGTACATCCAGTGCTTCACAGTGAAGCCCAAGC...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp AAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTTCAGAGACCCCTGTCATCCAAGCCTaGGGGCATGGTCCTGACGCC +
Preference number: 4 (lower is better)
Translates to: KYFQQLNMKTHWSSFSETPVIQA*GHGPDA
Trigger: GGCGTCAGGACCATGCCCTCAGGCTTGGATGACAGG...GGTCTCTGAAAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp AGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAAATGCAGGAAACCCTGTCTTaGGGGCCACAGCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: RVLSGETYGHRPKSQWKMQETLS*GPQLWS
Trigger: GGACCACAGCTGTGGCCCGCAAGACAGGGTTTCCTG...CATTTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR GCA 90 bp GGGCTGCGATGTGACAGGGAGCAGCATCCATACATCAGCTTCATCGAACATAAGTCCACCTTCATCAACTaGCTCAAGTTCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GLRCDREQHPYISFIEHKSTFIN*LKFCCR
Trigger: TCTGCAGCAGAACTTGAGGCAGTTGATGAAGGTGGA...CTTATGTTCGATGAAGCTGATGTATGGATGCTGCTCCCTGTCACATCGCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR GCA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTCCATGGGCCTCAGGATaGTCCTGCAGGTATCTGTCT +
Preference number: 4 (lower is better)
Translates to: KGKSFRARLRLSERLTCSPWASG*SCRYLS
Trigger: AGACAGATACCTGCAGGAGCATCCTGAGGCCCATGG...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGAATGTCATCGCCCGGTaGAGACGTCGTCTTCATTTT +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVENVIAR*RRRLHF
Trigger: AAAATGAAGACGACGTCTCCACCGGGCGATGACATT...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp CAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTAGCTGAGCTTGGCTCTTaGTGTGACTGGAGGGGGCGT +
Preference number: 4 (lower is better)
Translates to: QIFCTHREATQLKPPLVVAELGS*CDWRGR
Trigger: ACGCCCCCTCCAGTCACACCAAGAGCCAAGCTCAGC...TACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTTCTTCTTCAGCTCTTTaGGCTCATCCTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KGKSFRARLRLSERLTCSSSSAL*AHPGAE
Trigger: CTCTGCCCCAGGATGAGCTCAAAGAGCTGAAGAAGA...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp CAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTATAGGGGGCTCATATTTTTGCTCATCATGTCGTTaGTGGACCGGAACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QRSHPIKTTSGGIGGSYFCSSCR*WTGTAA
Trigger: TGCAGCTGTTCCGGTCCATCAACGACATGATGAGCA...AAAATATGAGCCCCCTATACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp CAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTATAGGGGGCTCATATTTTCAGCGATGGGGTGGCTaGAAACTTGGCTTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: QRSHPIKTTSGGIGGSYFQRWGG*KLGLSV
Trigger: AACAGACAAGCCAAGTTTGCAGCCACCCCATCGCTG...AAAATATGAGCCCCCTATACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp AAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTTCAGAGACCCAGGAAACCCTGTCTTaGGGGCCACAGCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: KYFQQLNMKTHWSSFSETQETLS*GPQLWS
Trigger: GGACCACAGCTGTGGCCCGCAAGACAGGGTTTCCTG...GGTCTCTGAAAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp ACAAAGTATGCCAGTAAACTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGACTTCTCCTCTCGCTTaGTGGGGACCCAGCGCGTCA +
Preference number: 4 (lower is better)
Translates to: TKYASKLRVLSGETYGHRTSPLA*WGPSAS
Trigger: TGACGCGCTGGGTCCCCACCAAGCGAGAGGAGAAGT...CCTATGACCATACGTTTCTCCACTCAAAACTCTGAGTTTACTGGCATACTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CCA 90 bp ACAAAGTATGCCAGTAAACTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGTGCGGGCCACAGCTGTaGTCCTGTCCACCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: TKYASKLRVLSGETYGHRCGPQL*SCPPSE
Trigger: CTCACTTGGTGGACAGGACCACAGCTGTGGCCCGCA...CCTATGACCATACGTTTCTCCACTCAAAACTCTGAGTTTACTGGCATACTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGGCTGCAGCTCAAAGTTaGCTTGATCCAGAAATCTCT +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVEAAAQS*LDPEIS
Trigger: AGAGATTTCTGGATCAAGCCAACTTTGAGCTGCAGC...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGAGCTCAAAGTTGGCTTaGTCCAGAAATCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVESSKLA*SRNLLF
Trigger: GAACAAGAGATTTCTGGATCAAGCCAACTTTGAGCT...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp CAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTATAGGGGGCTCATATTTTAAGGGACAGTTCATCTaGTCCCCTGGCATCGTAGTT +
Preference number: 4 (lower is better)
Translates to: QRSHPIKTTSGGIGGSYFKGQFI*SPGIVV
Trigger: AACTACGATGCCAGGGGAGCAGATGAACTGTCCCTT...AAAATATGAGCCCCCTATACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp CTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAACAGCGATGGGGTGGCTaGAAACTTGGCTTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LRVLSGETYGHRPKSQWKQRWGG*KLGLSV
Trigger: AACAGACAAGCCAAGTTTGCAGCCACCCCATCGCTG...TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR GCA 90 bp AGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAAATGGACTCTGCATTCCTTTaGCTGTGGCTGAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: RVLSGETYGHRPKSQWKMDSAFL*LWLSGP
Trigger: AGGGCCACTCAGCCACAGGCAAAGGAATGCAGAGTC...CATTTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR GCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGCTTGTTCAGCATATCTaGATACTGATTAATCGCCCG +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVELVQHI*ILINRP
Trigger: CGGGCGATTAATCAGTATGCAGATATGCTGAACAAG...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGTTGTCACACTCTTTGTaGAGGTCACAGAGCTTATAC +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVELSHSL*RSQSLY
Trigger: GTATAAGCTCTGTGACCTGCACAAAGAGTGTGACAA...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp AAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTTCAGAGACCGGGTCATCCAGGTGCTaGTGGACCATGCTGCTGATC +
Preference number: 4 (lower is better)
Translates to: KYFQQLNMKTHWSSFSETGSSRC*WTMLLI
Trigger: GATCAGCAGCATGGTCCAGCAGCACCTGGATGACCC...GGTCTCTGAAAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGGTCCTGACGCCATATTaGTTTTCCACTTTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVEVLTPY*FSTFSF
Trigger: GAAGGAAAAAGTGGAAAAGCAATATGGCGTCAGGAC...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp AGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAAATGAAACAAGGCCAGCGATaGGGTGGCTGCAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: RVLSGETYGHRPKSQWKMKQGQR*GGCKLG
Trigger: GCCAAGTTTGCAGCCACCCCATCGCTGGCCTTGTTT...CATTTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CCA 90 bp CAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTATAGGGGGCTCATATTTTGCATTCCTTTGCCTGTaGCTGAGTGGCCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QRSHPIKTTSGGIGGSYFAFLCL*LSGPFL
Trigger: AAGAAAAGGGCCACTCAGCCACAGGCAAAGGAATGC...AAAATATGAGCCCCCTATACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp CAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTATAGGGGGCTCATATTTTAAGCTCCGGGTGGAGTaGAATTCACACTGCATCATG +
Preference number: 4 (lower is better)
Translates to: QRSHPIKTTSGGIGGSYFKLRVE*NSHCIM
Trigger: CATGATGCAGTGTGAATTCCACTCCACCCGGAGCTT...AAAATATGAGCCCCCTATACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp CAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTATAGGGGGCTCATATTTTGAGGAGGTGGAGATGTaGGTGAGACCATCATATCCT +
Preference number: 4 (lower is better)
Translates to: QRSHPIKTTSGGIGGSYFEEVEM*VRPSYP
Trigger: AGGATATGATGGTCTCACCCACATCTCCACCTCCTC...AAAATATGAGCCCCCTATACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTCCTCCTTCCACTTCATaGTCCAGCTTAGTGATGATC +
Preference number: 4 (lower is better)
Translates to: KGKSFRARLRLSERLTCSPPSTS*SSLVMI
Trigger: GATCATCACTAAGCTGGATCATGAAGTGGAAGGAGG...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGATGACGGTTTCATGTTaGCCTTTTCCTTCAACAATG +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVEMTVSC*PFPSTM
Trigger: CATTGTTGAAGGAAAAGGGCAACATGAAACCGTCAT...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGTGGAAGGGGATGAAATaGTGTTTATCTTCATCATCG +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVEWKGMK*CLSSSS
Trigger: CGATGATGAAGATAAACAGCATTTCATCCCCTTCCA...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTGCCAAAAATGGAATCTaGCAGGCTATCAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: KGKSFRARLRLSERLTCSAKNGI*QAIRSL
Trigger: CAAGGACCTGATAGCCTGGCAGATTCCATTTTTGGC...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp CAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTATAGGGGGCTCATATTTTTTTGAAAGCTCCGGGTaGAGTGGAATTCACACTGCA +
Preference number: 4 (lower is better)
Translates to: QRSHPIKTTSGGIGGSYFFESSG*SGIHTA
Trigger: TGCAGTGTGAATTCCACTCCACCCGGAGCTTTCAAA...AAAATATGAGCCCCCTATACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp CTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAAAACTCCTTCCGAATCTaGTGGATGTCTCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LRVLSGETYGHRPKSQWKNSFRI*WMSPGS
Trigger: ACTTCCTGGAGACATCCATCAGATTCGGAAGGAGTT...TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp GGCTGCGATGTGACAGGGAGCAGCATCCATACATCAGCTTCATCGAACATAAGCACAGGATTAAAATGCTaGAATTTCCTATCCGCGATT +
Preference number: 4 (lower is better)
Translates to: GCDVTGSSIHTSASSNISTGLKC*NFLSAI
Trigger: AATCGCGGATAGGAAATTTCAGCATTTTAATCCTGT...GCTTATGTTCGATGAAGCTGATGTATGGATGCTGCTCCCTGTCACATCGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210121.2
ENSMUST00000211593.2
CDS-3UTR GCA 90 bp CTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAATGCCTCAAGTTCTGCTaGAGAAGGTTGGTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: LRVLSGETYGHRPKSQWKCLKFC*RRLVLD
Trigger: ATCCAACACCAACCTTCTGCAGCAGAACTTGAGGCA...TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CCA 90 bp AGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAAATGGCATTCCTTTGCCTGTaGCTGAGTGGCCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RVLSGETYGHRPKSQWKMAFLCL*LSGPFL
Trigger: AAGAAAAGGGCCACTCAGCCACAGGCAAAGGAATGC...CATTTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp ATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGGCTAATGGAGGTCCCCAGGGATaGCGGTTTCATGTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: INGRCEGERGFIPKCKANGGPQG*RFHVAL
Trigger: AAGGGCAACATGAAACCGTCATCCCTGGGGACCTCC...ATTAGCCTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp ACAAAGTATGCCAGTAAACTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGGCATCCAAGGTGTCCTaGAGGAACTTCACCACTTCA +
Preference number: 4 (lower is better)
Translates to: TKYASKLRVLSGETYGHRASKVS*RNFTTS
Trigger: TGAAGTGGTGAAGTTCCTTCAGGACACCTTGGATGC...CCTATGACCATACGTTTCTCCACTCAAAACTCTGAGTTTACTGGCATACTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp CAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTAGTGAAGAGGTCACTGTaGACAATCTCAATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QIFCTHREATQLKPPLVVVKRSL*TISIRQ
Trigger: CTGCCTGATTGAGATTGTTCACAGTGACCTCTTCAC...TACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp ACCGTATATACAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCCCTTGCCTCGGTAAATaGACACTTTGCCCCGAAGGA +
Preference number: 4 (lower is better)
Translates to: TVYTNILYTQRSHPIKTTPCLGK*TLCPEG
Trigger: TCCTTCGGGGCAAAGTGTTCATTTACCGAGGCAAGG...GGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTGTATATACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp ACAAAGTATGCCAGTAAACTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGAAGGGACAGTTCATCTaGTCCCCTGGCATCGTAGTT +
Preference number: 4 (lower is better)
Translates to: TKYASKLRVLSGETYGHRKGQFI*SPGIVV
Trigger: AACTACGATGCCAGGGGAGCAGATGAACTGTCCCTT...CCTATGACCATACGTTTCTCCACTCAAAACTCTGAGTTTACTGGCATACTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR GCA 90 bp AAGATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGGCTTCAGCTTCCTCGTGTTaGTGTCCCTCAGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: KINGRCEGERGFIPKCKASASSC*CPSAPC
Trigger: GCATGGAGCTGAGGGACAGCAACACGAGGAAGCTGA...AGCCTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR GCA 90 bp CAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTATGCCTCAAGTTCTGCTaGAGAAGGTTGGTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: QIFCTHREATQLKPPLVVCLKFC*RRLVLD
Trigger: ATCCAACACCAACCTTCTGCAGCAGAACTTGAGGCA...TACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp TTAGAAAACAAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTATCACAGCCTCAGACTaGTGCAGGGAGCTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: LENKYFQQLNMKTHWSSFITASD*CRELSA
Trigger: CGCTGACAGCTCCCTGCAGCAGTCTGAGGCTGTGAT...AAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTTGTTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp ATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGGCTAATTCCCCTGCCACCGCCTaGAAGGGGATGAAATGCTGT +
Preference number: 4 (lower is better)
Translates to: INGRCEGERGFIPKCKANSPATA*KGMKCC
Trigger: ACAGCATTTCATCCCCTTCCAGGCGGTGGCAGGGGA...ATTAGCCTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CCA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGATTTCGAACATCACCTaGCATAATAATCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: VTLHPRSHTADISRIGVEISNIT*HNNLRK
Trigger: TTTCCTGAGATTATTATGCCAGGTGATGTTCGAAAT...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp GGGCTGCGATGTGACAGGGAGCAGCATCCATACATCAGCTTCATCGAACATAAGATTTCGAACATCACCTaGCATAATAATCTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: GLRCDREQHPYISFIEHKISNIT*HNNLRK
Trigger: TTTCCTGAGATTATTATGCCAGGTGATGTTCGAAAT...CTTATGTTCGATGAAGCTGATGTATGGATGCTGCTCCCTGTCACATCGCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CCA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTCATCTTCGAGCTTTTTaGCTTCAGCCTTGTAGACAA +
Preference number: 4 (lower is better)
Translates to: KGKSFRARLRLSERLTCSHLRAF*LQPCRQ
Trigger: TTGTCTACAAGGCTGAAGCCAAAAAGCTCGAAGATG...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp AAGATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGGCTTCCTTTGCCTGTGGCTaGGTGGCCCTTTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: KINGRCEGERGFIPKCKASFACG*VALFFQ
Trigger: TTGGAAGAAAAGGGCCACTCAGCCACAGGCAAAGGA...AGCCTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp ACCGTATATACAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTTTCATACAGCTGGTTaGACAGTACCCGTGAGCGCA +
Preference number: 4 (lower is better)
Translates to: TVYTNILYTQRSHPIKTTFHTAG*TVPVSA
Trigger: TGCGCTCACGGGTACTGTTCAACCAGCTGTATGAAA...GGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTGTATATACGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp CAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTAAGCATATCTGCATACTaGTTAATCGCCCGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: QIFCTHREATQLKPPLVVSISAY*LIARRK
Trigger: CTTTCTGCGGGCGATTAATCAGTATGCAGATATGCT...TACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTCTTCACAAAGGCCAGTaGGAAGATCTTTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: KGKSFRARLRLSERLTCSLHKGQ*EDLFRF
Trigger: AAATCTGAAAAGATCTTCGCACTGGCCTTTGTGAAG...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp TTAGAAAACAAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTAAACAAGGCCAGCGATaGGGTGGCTGCAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: LENKYFQQLNMKTHWSSFKQGQR*GGCKLG
Trigger: GCCAAGTTTGCAGCCACCCCATCGCTGGCCTTGTTT...AAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTTGTTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp CAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTACCGACACGGACAATCTaGCAGACGAAACTAATTTTC +
Preference number: 4 (lower is better)
Translates to: QIFCTHREATQLKPPLVVPTRTI*QTKLIF
Trigger: GAAAATTAGTTTCGTCTGCCAGATTGTCCGTGTCGG...TACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp CTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAACATCTTCGAGCTTTTTaGCTTCAGCCTTGTAGACAA +
Preference number: 4 (lower is better)
Translates to: LRVLSGETYGHRPKSQWKHLRAF*LQPCRQ
Trigger: TTGTCTACAAGGCTGAAGCCAAAAAGCTCGAAGATG...TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CCA 90 bp TTAGAAAACAAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTTTCTCAATCTGCCCATaGGCCTCAGGATGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LENKYFQQLNMKTHWSSFFSICP*ASGCSC
Trigger: GCAGGAGCATCCTGAGGCCCATGGGCAGATTGAGAA...AAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTTGTTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp TTAGAAAACAAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTTGTTTTGCTGGGCAGTaGAGGTGGCTGTTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: LENKYFQQLNMKTHWSSFCFAGQ*RWLLPL
Trigger: CAACGGCAACAGCCACCTCCACTGCCCAGCAAAACA...AAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTTGTTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp TTAGAAAACAAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTGTCCTGTCCACCAAGTaGGGAAACTCCTTCCGAATC +
Preference number: 4 (lower is better)
Translates to: LENKYFQQLNMKTHWSSFVLSTK*GNSFRI
Trigger: GATTCGGAAGGAGTTTCCTCACTTGGTGGACAGGAC...AAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTTGTTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp ACCGTATATACAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTGTACCACATGTCTCTaGTCTCAAAGCCAATCTGCC +
Preference number: 4 (lower is better)
Translates to: TVYTNILYTQRSHPIKTTCTTCL*SQSQSA
Trigger: GGCAGATTGGCTTTGAGATCAGAGACATGTGGTACA...GGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTGTATATACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp CTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAATGGAAGGGGATGAAATaGTGTTTATCTTCATCATCG +
Preference number: 4 (lower is better)
Translates to: LRVLSGETYGHRPKSQWKWKGMK*CLSSSS
Trigger: CGATGATGAAGATAAACAGCATTTCATCCCCTTCCA...TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR GCA 90 bp CTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAACTTCACAAAGGCCAGTaGGAAGATCTTTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: LRVLSGETYGHRPKSQWKLHKGQ*EDLFRF
Trigger: AAATCTGAAAAGATCTTCGCACTGGCCTTTGTGAAG...TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR GCA 90 bp AAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTTCAGAGACCATCTCAAAGCCAATCTaGCTCCTCATGTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: KYFQQLNMKTHWSSFSETISKPI*LLMSPY
Trigger: GTATGGAGACATGAGGAGGCAGATTGGCTTTGAGAT...GGTCTCTGAAAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp ACCGTATATACAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCCCTCCTCCCACATCTTaGCTTTGTCAAAGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: TVYTNILYTQRSHPIKTTPPPTS*LCQSSG
Trigger: TCCACTACTTTGACAAAGGCAAGATGTGGGAGGAGG...GGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTGTATATACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp ACCGTATATACAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCCCCTTCAGCCAAAAATaGAATCTGCCAGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: TVYTNILYTQRSHPIKTTPFSQK*NLPGYQ
Trigger: CTGATAGCCTGGCAGATTCCATTTTTGGCTGAAGGG...GGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTGTATATACGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp AGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAAATGACTTGGCTTGTCTGTTaGTATCCATGTTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: RVLSGETYGHRPKSQWKMTWLVC*YPCSAF
Trigger: AAAAGCAGAACATGGATATCAACAGACAAGCCAAGT...CATTTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp AAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTTCAGAGACCGCAGGTATCTGTCTGTaGAGAAAGCCTTCTCATAAT +
Preference number: 4 (lower is better)
Translates to: KYFQQLNMKTHWSSFSETAGICL*RKPSHN
Trigger: ATTATGAGAAGGCTTTCTTCACAGACAGATACCTGC...GGTCTCTGAAAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp TCAAAGATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGTCTTTGAGCTCATCCTaGGGCAGAGTTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SKINGRCEGERGFIPKCKSLSSS*GRVPER
Trigger: CCTTTCTGGAACTCTGCCCCAGGATGAGCTCAAAGA...CTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTATCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CCA 90 bp ACCGTATATACAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCAAACCTTGTCCCTTGTaGTTGACTTCTTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TVYTNILYTQRSHPIKTTKPCPL*LTSLAA
Trigger: TGCAGCCAAAGAAGTCAACCACAAGGGACAAGGTTT...GGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTGTATATACGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp TTAGAAAACAAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTCCGCCTGGAAGGGGATaGAATGCTGTTTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: LENKYFQQLNMKTHWSSFPPGRG*NAVYLH
Trigger: ATGAAGATAAACAGCATTTCATCCCCTTCCAGGCGG...AAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTTGTTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR TCA 90 bp ATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGGCTAATCCGCCTGGAAGGGGATaGAATGCTGTTTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: INGRCEGERGFIPKCKANPPGRG*NAVYLH
Trigger: ATGAAGATAAACAGCATTTCATCCCCTTCCAGGCGG...ATTAGCCTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp ACCGTATATACAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCAGCTGTCAGCGGGCTTaGATTCCTTATCAAATATCT +
Preference number: 4 (lower is better)
Translates to: TVYTNILYTQRSHPIKTTSCQRA*IPYQIS
Trigger: AGATATTTGATAAGGAATTCAAGCCCGCTGACAGCT...GGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTGTATATACGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp TCAAAGATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGAGAAGCAACTTCGTGTaGTCGGAAGAGACTGATGGT +
Preference number: 4 (lower is better)
Translates to: SKINGRCEGERGFIPKCKRSNFV*SEETDG
Trigger: ACCATCAGTCTCTTCCGAGCACACGAAGTTGCTTCT...CTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTATCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CCA 90 bp AAGATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGGCTAAACCTTGTCCCTTGTaGTTGACTTCTTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: KINGRCEGERGFIPKCKAKPCPL*LTSLAA
Trigger: TGCAGCCAAAGAAGTCAACCACAAGGGACAAGGTTT...AGCCTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp AAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTTCAGAGACCACAGGATTAAAATGCTaGAATTTCCTATCCGCGATT +
Preference number: 4 (lower is better)
Translates to: KYFQQLNMKTHWSSFSETTGLKC*NFLSAI
Trigger: AATCGCGGATAGGAAATTTCAGCATTTTAATCCTGT...GGTCTCTGAAAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR GCA 90 bp ACAAAGTATGCCAGTAAACTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGGTTGACTTCTTTGGCTaGAATGACTTTGTTTATGAC +
Preference number: 4 (lower is better)
Translates to: TKYASKLRVLSGETYGHRVDFFG*NDFVYD
Trigger: GTCATAAACAAAGTCATTGCAGCCAAAGAAGTCAAC...CCTATGACCATACGTTTCTCCACTCAAAACTCTGAGTTTACTGGCATACTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CCA 90 bp TCAAAGATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGCCGACACGGACAATCTaGCAGACGAAACTAATTTTC +
Preference number: 4 (lower is better)
Translates to: SKINGRCEGERGFIPKCKPTRTI*QTKLIF
Trigger: GAAAATTAGTTTCGTCTGCCAGATTGTCCGTGTCGG...CTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTATCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CCA 90 bp TCAAAGATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGACCAGAGTGGAGATCTaGAAAGAGTCTTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SKINGRCEGERGFIPKCKTRVEI*KESLLM
Trigger: CATCAGCAAAGACTCTTTCCAGATCTCCACTCTGGT...CTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTATCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp TCAAAGATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGTCCATGTTCTGCTTTTaGGATTTCTCCTCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: SKINGRCEGERGFIPKCKSMFCF*DFSSCS
Trigger: ACTGCAAGAGGAGAAATCTCAAAAGCAGAACATGGA...CTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTATCTTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR GCA 90 bp AAGATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGGCTATGACGGTTTCATGTTaGCCTTTTCCTTCAACAATG +
Preference number: 4 (lower is better)
Translates to: KINGRCEGERGFIPKCKAMTVSC*PFPSTM
Trigger: CATTGTTGAAGGAAAAGGGCAACATGAAACCGTCAT...AGCCTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR GCA 90 bp TTAGAAAACAAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTTTGTCATTGGTCAACTaGATTGTCTCGATGGCATTC +
Preference number: 4 (lower is better)
Translates to: LENKYFQQLNMKTHWSSFLSLVN*IVSMAF
Trigger: GAATGCCATCGAGACAATGCAGTTGACCAATGACAA...AAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTTGTTTTCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CCA 90 bp TTAGAAAACAAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTCAAAATAGTCAGGCTTaGGTCTTATCACCTTCACGA +
Preference number: 4 (lower is better)
Translates to: LENKYFQQLNMKTHWSSFQNSQA*VLSPSR
Trigger: TCGTGAAGGTGATAAGACCCAAGCCTGACTATTTTG...AAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTTGTTTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
3UTR CAA 72 bp AATAACAATACAAAGTATGCCAGTAAACTCAGAGTTTaGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: NNNTKYASKLRV*SGETYGHRPKS
Trigger: TGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAGTTTACTGGCATACTTTGTATTGTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp TCAAAGATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGTTGTTTATGACAGTTTaGAGGAAGTCATTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SKINGRCEGERGFIPKCKLFMTV*RKSFSP
Trigger: AGGGGAGAATGACTTCCTTCAAACTGTCATAAACAA...CTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTATCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CCA 90 bp ATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGGCTAATTTTCAGATTTATCCTTaGAGTCCTGCGAGGATCTAT +
Preference number: 4 (lower is better)
Translates to: INGRCEGERGFIPKCKANFQIYP*SPARIY
Trigger: ATAGATCCTCGCAGGACTCCAAGGATAAATCTGAAA...ATTAGCCTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR TCA 90 bp TCAAAGATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGACAGGATTAAAATGCTaGAATTTCCTATCCGCGATT +
Preference number: 4 (lower is better)
Translates to: SKINGRCEGERGFIPKCKTGLKC*NFLSAI
Trigger: AATCGCGGATAGGAAATTTCAGCATTTTAATCCTGT...CTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTATCTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000210121.2
ENSMUST00000211593.2
CDS-3UTR GCA 90 bp TTAGAAAACAAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTGTTGACTTCTTTGGCTaGAATGACTTTGTTTATGAC +
Preference number: 4 (lower is better)
Translates to: LENKYFQQLNMKTHWSSFVDFFG*NDFVYD
Trigger: GTCATAAACAAAGTCATTGCAGCCAAAGAAGTCAAC...AAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTTGTTTTCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp GGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTCAGTGGAGGTGGCTGTaGCCGTTGTGGGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GPEEVIGRHGRCRREAGGQWRWL*PLWGRR
Trigger: CCTCCTCCCCCACAACGGCAACAGCCACCTCCACTG...ACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp ACTAAGGCGAAGCATCCCAGGGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATTACTTCTCCTCTCGCTaGGTGGGGACCCAGCGCGTC +
Preference number: 5 (lower is better)
Translates to: TKAKHPRARRRSSAGTADYFSSR*VGTQRV
Trigger: GACGCGCTGGGTCCCCACCAAGCGAGAGGAGAAGTA...ATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCCCTGGGATGCTTCGCCTTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp CTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGGCTGACTTCTGCCATGTTGCCTTaGAGGGGCAGAGGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: LLTGVGLGVCLIPPAWLTSAMLP*RGRGGG
Trigger: CCCACCCCCTCTGCCCCTCAAAGGCAACATGGCAGA...AGTCAGCCAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp CTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGGCTGACTGGAGGAGGTGGTGTTTaGCTGGGCAGTGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: LLTGVGLGVCLIPPAWLTGGGGV*LGSGGG
Trigger: GCCACCTCCACTGCCCAGCAAAACACCACCTCCTCC...AGTCAGCCAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp ATGACTTGGCTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGAGGTGGCTGTTGCCGTaGTGGGGGAGGAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: MTWLHSHCAETLQASGPVRWLLP*WGRRRW
Trigger: CCACCTCCTCCTCCCCCACAACGGCAACAGCCACCT...CACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAGCCAAGTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 90 bp ATGCTGAAGCTGAGCTTGGCTCTTGGTGTGACTGGAGGGGGCGTCTaGTGGGAGGACGGTGATGCTGGAGACACAGAGAAGCGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: MLKLSLALGVTGGGV*WEDGDAGDTEKRLS
Trigger: TGAAAGGCGCTTCTCTGTGTCTCCAGCATCACCGTCCTCCCAGCAGACGCCCCCTCCAGTCACACCAAGAGCCAAGCTCAGCTTCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp CTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGGCTAGGATGGTCAGCTTCCTCGTGTaGCTGTCCCTCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: LHSHCAETLQASGPVARMVSFLV*LSLSSM
Trigger: CATGGAGCTGAGGGACAGCAACACGAGGAAGCTGAC...CATCCTAGCCACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp GGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTCCTTGTCCCTTGTGGTaGACTTCTTTGGCTGCAATG +
Preference number: 5 (lower is better)
Translates to: GPEEVIGRHGRCRREAGGPCPLW*TSLAAM
Trigger: CATTGCAGCCAAAGAAGTCAACCACAAGGGACAAGG...ACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp AGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTTAGCCTTTCAGGAAACCCTGTCTaGCGGGCCACAGCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: RRSSAGTADVGEKQEVSLSGNPV*RATAVV
Trigger: GACCACAGCTGTGGCCCGCAAGACAGGGTTTCCTGA...AAGGCTAACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 90 bp CGGCAAGTACTTCAGGGCTGCCCCCTTCACCCTGACTGTGAGCTCTaGCAGGCTGCTCATCATGTCGTTGATGGACCGGAACAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: RQVLQGCPLHPDCEL*QAAHHVVDGPEQLQ
Trigger: TTGCAGCTGTTCCGGTCCATCAACGACATGATGAGCAGCCTGTCAGAGCTCACAGTCAGGGTGAAGGGGGCAGCCCTGAAGTACTTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 90 bp AAGAGACGGAAGCCACTGACAGGGGCCGGGAGGATGATGGCATGGTaGAAGATCGCACCATTGAACGTGGACGGCTGCCTCTCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: KRRKPLTGAGRMMAW*KIAPLNVDGCLSCH
Trigger: ATGACAGGAGAGGCAGCCGTCCACGTTCAATGGTGCGATCTTTCACCATGCCATCATCCTCCCGGCCCCTGTCAGTGGCTTCCGTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 90 bp CTGAAGCTGAGCTTGGCTCTTGGTGTGACTGGAGGGGGCGTCTGCTaGGAGGACGGTGATGCTGGAGACACAGAGAAGCGCCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: LKLSLALGVTGGGVC*EDGDAGDTEKRLSF
Trigger: AAATGAAAGGCGCTTCTCTGTGTCTCCAGCATCACCGTCCTCCCAGCAGACGCCCCCTCCAGTCACACCAAGAGCCAAGCTCAGCTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp CTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGGCTGACTGGGGTGGCTGCAAACTaGGCTTGTCTGTTGATATCC +
Preference number: 5 (lower is better)
Translates to: LLTGVGLGVCLIPPAWLTGVAAN*ACLLIS
Trigger: GGATATCAACAGACAAGCCAAGTTTGCAGCCACCCC...AGTCAGCCAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp TGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGCTGCTCATCATGTCGTaGATGGACCGGAACAGCTGC +
Preference number: 5 (lower is better)
Translates to: CIASHGSRARGLPHPSRLLLIMS*MDRNSC
Trigger: GCAGCTGTTCCGGTCCATCAACGACATGATGAGCAG...CAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 90 bp TCCTTGGAGTCCTGCGAGGATCTATGGCGGAAGGTGAATCGAAGGTaGCTCCGGTTCACGTCCTCAATGGGGATGGCCACCTTAAGGGTC +
Preference number: 5 (lower is better)
Translates to: SLESCEDLWRKVNRR*LRFTSSMGMATLRV
Trigger: GACCCTTAAGGTGGCCATCCCCATTGAGGACGTGAACCGGAGTCACCTTCGATTCACCTTCCGCCATAGATCCTCGCAGGACTCCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS TCA 90 bp CTTTCAGCTGTCCCTGTGTTGTCGCCTGGAACCCGTCCCGCTGAGTaGGGTGAGCTGCACACACGTCCTCTGACCACTTTAGAAGTTTCG +
Preference number: 5 (lower is better)
Translates to: LSAVPVLSPGTRPAE*GELHTRPLTTLEVS
Trigger: CGAAACTTCTAAAGTGGTCAGAGGACGTGTGTGCAGCTCACCTCACTCAGCGGGACGGGTTCCAGGCGACAACACAGGGACAGCTGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 90 bp AGCATGGACAGGGGGTTGATAGGCAGGCCCGGGTCATCCAGGTGCTaGTGGACCATGCTGCTGATCTTGTCATTGGTCAACTGCATTGTC +
Preference number: 5 (lower is better)
Translates to: SMDRGLIGRPGSSRC*WTMLLILSLVNCIV
Trigger: GACAATGCAGTTGACCAATGACAAGATCAGCAGCATGGTCCAGCAGCACCTGGATGACCCGGGCCTGCCTATCAACCCCCTGTCCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 90 bp ATGGACAGGGGGTTGATAGGCAGGCCCGGGTCATCCAGGTGCTGCTaGACCATGCTGCTGATCTTGTCATTGGTCAACTGCATTGTCTCG +
Preference number: 5 (lower is better)
Translates to: MDRGLIGRPGSSRCC*TMLLILSLVNCIVS
Trigger: CGAGACAATGCAGTTGACCAATGACAAGATCAGCAGCATGGTCCAGCAGCACCTGGATGACCCGGGCCTGCCTATCAACCCCCTGTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp GGCTACTGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCTCTCCAGGTGGTACTaGAGCTGGTCTGTCATCATG +
Preference number: 5 (lower is better)
Translates to: GYCIASHGSRARGLPHPSLSRWY*SWSVIM
Trigger: CATGATGACAGACCAGCTCAAGTACCACCTGGAGAG...GGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCAGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 90 bp GGAGGTAAGTCTAGCTTGGGCTTCACTGTGAAGCACTGGATGTACTaGCCGGGAGAAGTCTTAATGTCATCGCCCGGTGGAGACGTCGTC +
Preference number: 5 (lower is better)
Translates to: GGKSSLGFTVKHWMY*PGEVLMSSPGGDVV
Trigger: GACGACGTCTCCACCGGGCGATGACATTAAGACTTCTCCCGGCCAGTACATCCAGTGCTTCACAGTGAAGCCCAAGCTAGACTTACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 90 bp CAGATTTCCATAATCTGCCATGTTGCCTTTGAGGGGCAGAGGGGGTaGGACATCGGCCACATCCATTCCCATCATGCCGTTCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: QISIICHVAFEGQRG*DIGHIHSHHAVQLQ
Trigger: CTGGAGCTGAACGGCATGATGGGAATGGATGTGGCCGATGTCCCACCCCCTCTGCCCCTCAAAGGCAACATGGCAGATTATGGAAATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 90 bp GCTGATGGTACAACTCCCAAGACTCTGCATTCCTTTGCCTGTGGCTaGGTGGCCCTTTTCTTCCAACTCCCCCTTGGTACTAGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: ADGTTPKTLHSFACG*VALFFQLPLGTREA
Trigger: AGCCTCCCTAGTACCAAGGGGGAGTTGGAAGAAAAGGGCCACTCAGCCACAGGCAAAGGAATGCAGAGTCTTGGGAGTTGTACCATCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS GCA 90 bp ACCACTTCACCACCGTCCACCTTCATCAACTGCCTCAAGTTCTGCTaGAGAAGGTTGGTGTTGGATCTCCACTTCAACAGCCCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: TTSPPSTFINCLKFC*RRLVLDLHFNSPRR
Trigger: CCTCCTGGGGCTGTTGAAGTGGAGATCCAACACCAACCTTCTGCAGCAGAACTTGAGGCAGTTGATGAAGGTGGACGGTGGTGAAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CCA 90 bp CCACCTTCATCAACTGCCTCAAGTTCTGCTGCAGAAGGTTGGTGTTaGATCTCCACTTCAACAGCCCCAGGAGGTCCACGTTCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: PPSSTASSSAAEGWC*ISTSTAPGGPRSGS
Trigger: TGACCCAGAACGTGGACCTCCTGGGGCTGTTGAAGTGGAGATCCAACACCAACCTTCTGCAGCAGAACTTGAGGCAGTTGATGAAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CCA 90 bp CACCGTCCACCTTCATCAACTGCCTCAAGTTCTGCTGCAGAAGGTTaGTGTTGGATCTCCACTTCAACAGCCCCAGGAGGTCCACGTTCT +
Preference number: 5 (lower is better)
Translates to: HRPPSSTASSSAAEG*CWISTSTAPGGPRS
Trigger: AGAACGTGGACCTCCTGGGGCTGTTGAAGTGGAGATCCAACACCAACCTTCTGCAGCAGAACTTGAGGCAGTTGATGAAGGTGGACGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp ACTAAGGCGAAGCATCCCAGGGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATACCGATCAATATCTTTaGGTAATCCTGAACTTGACC +
Preference number: 5 (lower is better)
Translates to: TKAKHPRARRRSSAGTADTDQYL*VILNLT
Trigger: GGTCAAGTTCAGGATTACCAAAAGATATTGATCGGT...ATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCCCTGGGATGCTTCGCCTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp TGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGCACAAACCTTGTCCCTaGTGGTTGACTTCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: CIASHGSRARGLPHPSRLHKPCP*WLTSLA
Trigger: AGCCAAAGAAGTCAACCACAAGGGACAAGGTTTGTG...CAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp GGGCTGCGATGTGACAGGGAGCAGCATCCATACATCAGCTTCATCGAACATAAGAGACTCTGCATTCCTTaGCCTGTGGCTGAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: GLRCDREQHPYISFIEHKRLCIP*PVAEWP
Trigger: GGGCCACTCAGCCACAGGCAAAGGAATGCAGAGTCT...CTTATGTTCGATGAAGCTGATGTATGGATGCTGCTCCCTGTCACATCGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp ATGACTTGGCTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGTTTTCATACAGCTGGTaGAACAGTACCCGTGAGCGC +
Preference number: 5 (lower is better)
Translates to: MTWLHSHCAETLQASGPVFSYSW*NSTRER
Trigger: GCGCTCACGGGTACTGTTCAACCAGCTGTATGAAAA...CACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAGCCAAGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp GGCTACTGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCAAGTCAGCTTCCCCCTaGTTTTCATACAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GYCIASHGSRARGLPHPSKSASP*FSYSWL
Trigger: CAACCAGCTGTATGAAAACAAGGGGGAAGCTGACTT...GGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCAGTAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp GTGACACTCCACCCCAGGAGTCACACTGCAGATATATCAAGGATAGGGGTTGAGTCGTCCTTGTCTAGCTaGTCCTGGGACCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: VTLHPRSHTADISRIGVESSLSS*SWDLEC
Trigger: GCACTCCAGGTCCCAGGACAAGCTAGACAAGGACGA...CTCAACCCCTATCCTTGATATATCTGCAGTGTGACTCCTGGGGTGGAGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp ATGACTTGGCTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGTTATCTGGATCGTCCTaGTCTAGCTTGTCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: MTWLHSHCAETLQASGPVLSGSS*SSLSWD
Trigger: GTCCCAGGACAAGCTAGACAAGGACGATCCAGATAA...CACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAGCCAAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 90 bp TTCACCACTTCACCACCGTCCACCTTCATCAACTGCCTCAAGTTCTaGTGCAGAAGGTTGGTGTTGGATCTCCACTTCAACAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: FTTSPPSTFINCLKF*CRRLVLDLHFNSPR
Trigger: CCTGGGGCTGTTGAAGTGGAGATCCAACACCAACCTTCTGCAGCAGAACTTGAGGCAGTTGATGAAGGTGGACGGTGGTGAAGTGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CCA 90 bp TGTGCACGGTGTCTCCAATTTGAAGGGACAGTTCATCTGCTCCCCTaGCATCGTAGTTGTAAAAGGCCACGCCGTACTTCTCCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: CARCLQFEGTVHLLP*HRSCKRPRRTSPLA
Trigger: AGCGAGAGGAGAAGTACGGCGTGGCCTTTTACAACTACGATGCCAGGGGAGCAGATGAACTGTCCCTTCAAATTGGAGACACCGTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CCA 90 bp ATGGTACAACTCCCAAGACTCTGCATTCCTTTGCCTGTGGCTGAGTaGCCCTTTTCTTCCAACTCCCCCTTGGTACTAGGGAGGCTCAAG +
Preference number: 5 (lower is better)
Translates to: MVQLPRLCIPLPVAE*PFSSNSPLVLGRLK
Trigger: CTTGAGCCTCCCTAGTACCAAGGGGGAGTTGGAAGAAAAGGGCCACTCAGCCACAGGCAAAGGAATGCAGAGTCTTGGGAGTTGTACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CCA 90 bp TTGGTGTTGGATCTCCACTTCAACAGCCCCAGGAGGTCCACGTTCTaGGTCAGTTTCGTGGAACACACCAGAGTGGAGATCTGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: LVLDLHFNSPRRSTF*VSFVEHTRVEIWKE
Trigger: CTCTTTCCAGATCTCCACTCTGGTGTGTTCCACGAAACTGACCCAGAACGTGGACCTCCTGGGGCTGTTGAAGTGGAGATCCAACACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp CTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGGCTGACTGATGACGGTTTCATGTaGCCCTTTTCCTTCAACAAT +
Preference number: 5 (lower is better)
Translates to: LLTGVGLGVCLIPPAWLTDDGFM*PFSFNN
Trigger: ATTGTTGAAGGAAAAGGGCAACATGAAACCGTCATC...AGTCAGCCAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp ACTAAGGCGAAGCATCCCAGGGCCCGGAGGAGGTCATCGGCAGGCACGGCAGATTTATCAAATAACACTTaGTATTGCTCGTCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: TKAKHPRARRRSSAGTADLSNNT*YCSSPL
Trigger: CAGAGGAGACGAGCAATACAAAGTGTTATTTGATAA...ATCTGCCGTGCCTGCCGATGACCTCCTCCGGGCCCTGGGATGCTTCGCCTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 90 bp TTTCAGATTTATCCTTGGAGTCCTGCGAGGATCTATGGCGGAAGGTaGATCGAAGGTGACTCCGGTTCACGTCCTCAATGGGGATGGCCA +
Preference number: 5 (lower is better)
Translates to: FQIYPWSPARIYGGR*IEGDSGSRPQWGWP
Trigger: TGGCCATCCCCATTGAGGACGTGAACCGGAGTCACCTTCGATTCACCTTCCGCCATAGATCCTCGCAGGACTCCAAGGATAAATCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS TCA 90 bp ATGCGCTCGTGGAATGGCCTCAGGGCCTCTGTGACTTTGTCTCCATaGATCCTGATCCCTTCAGCCAAAAATGGAATCTGCCAGGCTATC +
Preference number: 5 (lower is better)
Translates to: MRSWNGLRASVTLSP*ILIPSAKNGICQAI
Trigger: GATAGCCTGGCAGATTCCATTTTTGGCTGAAGGGATCAGGATTCATGGAGACAAAGTCACAGAGGCCCTGAGGCCATTCCACGAGCGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 90 bp GGCCGCAGGGGACTTATCGTTTCAGAAAGGATCACAGCCTCAGACTaGTGCAGGGAGCTGTCAGCGGGCTTGAATTCCTTATCAAATATC +
Preference number: 5 (lower is better)
Translates to: GRRGLIVSERITASD*CRELSAGLNSLSNI
Trigger: GATATTTGATAAGGAATTCAAGCCCGCTGACAGCTCCCTGCAGCAGTCTGAGGCTGTGATCCTTTCTGAAACGATAAGTCCCCTGCGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 90 bp CTCGTGTTGCTGTCCCTCAGCTCCATGCGACCGACACGGACAATCTaGCAGACGAAACTAATTTTCTCCCTTTTCAAGTCTTTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: LVLLSLSSMRPTRTI*QTKLIFSLFKSLLP
Trigger: GGGGAGCAAAGACTTGAAAAGGGAGAAAATTAGTTTCGTCTGCCAGATTGTCCGTGTCGGTCGCATGGAGCTGAGGGACAGCAACACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CCA 90 bp TTTTTCCTTCAGTTGCTTGAAGCAGGCTTCCATGCGCTCGTGGAATaGCCTCAGGGCCTCTGTGACTTTGTCTCCATGAATCCTGATCCC +
Preference number: 5 (lower is better)
Translates to: FFLQLLEAGFHALVE*PQGLCDFVSMNPDP
Trigger: GGGATCAGGATTCATGGAGACAAAGTCACAGAGGCCCTGAGGCCATTCCACGAGCGCATGGAAGCCTGCTTCAAGCAACTGAAGGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp CTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAATACTTCTCCTCTCGCTaGGTGGGGACCCAGCGCGTC +
Preference number: 5 (lower is better)
Translates to: LRVLSGETYGHRPKSQWKYFSSR*VGTQRV
Trigger: GACGCGCTGGGTCCCCACCAAGCGAGAGGAGAAGTA...TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp GGCTACTGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCCACGTTCTTCGCAGTaGTTTTACTGCCTTTATCAA +
Preference number: 5 (lower is better)
Translates to: GYCIASHGSRARGLPHPSPRSSQ*FYCLYQ
Trigger: TTGATAAAGGCAGTAAAACAACTGCGAAGAACGTGG...GGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCAGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp AGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTTAGCCTTATTTTGCTGAGCTCCTaGGGATCAAACACCAACTTC +
Preference number: 5 (lower is better)
Translates to: RRSSAGTADVGEKQEVSLILLSS*GSNTNF
Trigger: GAAGTTGGTGTTTGATCCCAAGGAGCTCAGCAAAAT...AAGGCTAACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp TGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGATGTCATTTCCAATATaGGGCCAACCATTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: CIASHGSRARGLPHPSRLMSFPI*GQPFLG
Trigger: TCCCAGAAATGGTTGGCCCAATATTGGAAATGACAT...CAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTCTGGCTCTTGGGTCTTaGGGGCCGCAGGGGACTTAT +
Preference number: 5 (lower is better)
Translates to: KGKSFRARLRLSERLTCSLALGS*GPQGTY
Trigger: ATAAGTCCCCTGCGGCCCCAAAGACCCAAGAGCCAG...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTTTGATCACCTGGCTCTaGGGTCTTTGGGGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: KGKSFRARLRLSERLTCSLITWL*GLWGRR
Trigger: CCTGCGGCCCCAAAGACCCAAGAGCCAGGTGATCAA...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 90 bp GCTCATAATCAAACATCTCTGTTTCGTACTGCTCCGCAAGTTCCTTaGCCAGGGCGATGGCCTCCTCCCACATCTTGCCTTTGTCAAAGT +
Preference number: 5 (lower is better)
Translates to: AHNQTSLFRTAPQVP*PGRWPPPTSCLCQS
Trigger: ACTTTGACAAAGGCAAGATGTGGGAGGAGGCCATCGCCCTGGGCAAGGAACTTGCGGAGCAGTACGAAACAGAGATGTTTGATTATGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 90 bp TCTTTATCTGGATCGTCCTTGTCTAGCTTGTCCTGGGACCTGGAGTaGATCTTCTTCGGCAGCAGAGGCTCTAGAGCAAATCCATCAGAG +
Preference number: 5 (lower is better)
Translates to: SLSGSSLSSLSWDLE*IFFGSRGSRANPSE
Trigger: CTCTGATGGATTTGCTCTAGAGCCTCTGCTGCCGAAGAAGATGCACTCCAGGTCCCAGGACAAGCTAGACAAGGACGATCCAGATAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 90 bp TTGTCCTTCTTCTCTTTATCTGGATCGTCCTTGTCTAGCTTGTCCTaGGACCTGGAGTGCATCTTCTTCGGCAGCAGAGGCTCTAGAGCA +
Preference number: 5 (lower is better)
Translates to: LSFFSLSGSSLSSLS*DLECIFFGSRGSRA
Trigger: TGCTCTAGAGCCTCTGCTGCCGAAGAAGATGCACTCCAGGTCCCAGGACAAGCTAGACAAGGACGATCCAGATAAAGAGAAGAAGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 90 bp GGAGACACAGAGAAGCGCCTTTCATTTCCAATGACATTGATCACCTaGCTCTTGGGTCTTTGGGGCCGCAGGGGACTTATCGTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: GDTEKRLSFPMTLIT*LLGLWGRRGLIVSE
Trigger: TTCTGAAACGATAAGTCCCCTGCGGCCCCAAAGACCCAAGAGCCAGGTGATCAATGTCATTGGAAATGAAAGGCGCTTCTCTGTGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp ATGACTTGGCTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGATCCATGTTCTGCTTTaGAGATTTCTCCTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: MTWLHSHCAETLQASGPVIHVLL*RFLLLQ
Trigger: CTGCAAGAGGAGAAATCTCAAAAGCAGAACATGGAT...CACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAGCCAAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp GGCTACTGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCAACTTGGCTTGTCTGTaGATATCCATGTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: GYCIASHGSRARGLPHPSNLACL*ISMFCF
Trigger: AAAGCAGAACATGGATATCAACAGACAAGCCAAGTT...GGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCAGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp CTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAATCAGGAAACCCTGTCTaGCGGGCCACAGCTGTGGTC +
Preference number: 5 (lower is better)
Translates to: LRVLSGETYGHRPKSQWKSGNPV*RATAVV
Trigger: GACCACAGCTGTGGCCCGCAAGACAGGGTTTCCTGA...TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp GGGCTGCGATGTGACAGGGAGCAGCATCCATACATCAGCTTCATCGAACATAAGTTCTGCTGCAGAAGGTaGGTGTTGGATCTCCACTTC +
Preference number: 5 (lower is better)
Translates to: GLRCDREQHPYISFIEHKFCCRR*VLDLHF
Trigger: GAAGTGGAGATCCAACACCAACCTTCTGCAGCAGAA...CTTATGTTCGATGAAGCTGATGTATGGATGCTGCTCCCTGTCACATCGCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTTTGTACAGCTGCTCGTaGACTCCCGGCTTCTCTGCG +
Preference number: 5 (lower is better)
Translates to: KGKSFRARLRLSERLTCSLYSCS*TPGFSA
Trigger: CGCAGAGAAGCCGGGAGTCAACGAGCAGCTGTACAA...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp CAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTATAGGGGGCTCATATTTTCAGTTGCAGGGACTCTaGAGTGAGGAAAGCCACGGC +
Preference number: 5 (lower is better)
Translates to: QRSHPIKTTSGGIGGSYFQLQGL*SEESHG
Trigger: GCCGTGGCTTTCCTCACTCAAGAGTCCCTGCAACTG...AAAATATGAGCCCCCTATACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp TGCATAGCTTCTCACGGGAGTAGGGCTAGGGGTTTGCCTCATCCCTCCCGCTTGGAATTTTATCTTGTGTaGACCCAGGTTGTACCACAT +
Preference number: 5 (lower is better)
Translates to: CIASHGSRARGLPHPSRLEFYLV*TQVVPH
Trigger: ATGTGGTACAACCTGGGTCAACACAAGATAAAATTC...CAAGCGGGAGGGATGAGGCAAACCCCTAGCCCTACTCCCGTGAGAAGCTATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 90 bp GAGATCTGGAAAGAGTCTTTGCTGATGGTACAACTCCCAAGACTCTaGATTCCTTTGCCTGTGGCTGAGTGGCCCTTTTCTTCCAACTCC +
Preference number: 5 (lower is better)
Translates to: EIWKESLLMVQLPRL*IPLPVAEWPFSSNS
Trigger: GGAGTTGGAAGAAAAGGGCCACTCAGCCACAGGCAAAGGAATGCAGAGTCTTGGGAGTTGTACCATCAGCAAAGACTCTTTCCAGATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS GCA 90 bp CGCAGGGGACTTATCGTTTCAGAAAGGATCACAGCCTCAGACTGCTaGAGGGAGCTGTCAGCGGGCTTGAATTCCTTATCAAATATCTCT +
Preference number: 5 (lower is better)
Translates to: RRGLIVSERITASDC*RELSAGLNSLSNIS
Trigger: AGAGATATTTGATAAGGAATTCAAGCCCGCTGACAGCTCCCTGCAGCAGTCTGAGGCTGTGATCCTTTCTGAAACGATAAGTCCCCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 90 bp TCTTCTCTTTATCTGGATCGTCCTTGTCTAGCTTGTCCTGGGACCTaGAGTGCATCTTCTTCGGCAGCAGAGGCTCTAGAGCAAATCCAT +
Preference number: 5 (lower is better)
Translates to: SSLYLDRPCLACPGT*SASSSAAEALEQIH
Trigger: ATGGATTTGCTCTAGAGCCTCTGCTGCCGAAGAAGATGCACTCCAGGTCCCAGGACAAGCTAGACAAGGACGATCCAGATAAAGAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp GGCTGCGATGTGACAGGGAGCAGCATCCATACATCAGCTTCATCGAACATAAGCTTGGTAATCCTGAACTaGACCAGCGGACCAGATAGT +
Preference number: 5 (lower is better)
Translates to: GCDVTGSSIHTSASSNISLVILN*TSGPDS
Trigger: ACTATCTGGTCCGCTGGTCAAGTTCAGGATTACCAA...GCTTATGTTCGATGAAGCTGATGTATGGATGCTGCTCCCTGTCACATCGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp AGGAGGTCATCGGCAGGCACGGCAGATGTAGGAGAGAAGCAGGAGGTTAGCCTTTTTGTTTATGACAGTTaGAAGGAAGTCATTCTCCCC +
Preference number: 5 (lower is better)
Translates to: RRSSAGTADVGEKQEVSLFVYDS*KEVILP
Trigger: GGGGAGAATGACTTCCTTCAAACTGTCATAAACAAA...AAGGCTAACCTCCTGCTTCTCTCCTACATCTGCCGTGCCTGCCGATGACCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp ATGACTTGGCTCCATTCCCACTGTGCTGAGACACTTCAGGCCTCTGGTCCCGTGCTCATGTCTCCATACTaGTTAAGGATTTTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: MTWLHSHCAETLQASGPVLMSPY*LRILAL
Trigger: GAGAGCTAAAATCCTTAACAAGTATGGAGACATGAG...CACGGGACCAGAGGCCTGAAGTGTCTCAGCACAGTGGGAATGGAGCCAAGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 90 bp TTCTTCCAACTCCCCCTTGGTACTAGGGAGGCTCAAGTATGTGGCTaGATCTTCGAGCTTTTTGGCTTCAGCCTTGTAGACAATAAGGTC +
Preference number: 5 (lower is better)
Translates to: FFQLPLGTREAQVCG*IFELFGFSLVDNKV
Trigger: GACCTTATTGTCTACAAGGCTGAAGCCAAAAAGCTCGAAGATGCAGCCACATACTTGAGCCTCCCTAGTACCAAGGGGGAGTTGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp CTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAATCTTCCAACTCCCCCTaGGTACTAGGGAGGCTCAAG +
Preference number: 5 (lower is better)
Translates to: LRVLSGETYGHRPKSQWKSSNSP*VLGRLK
Trigger: CTTGAGCCTCCCTAGTACCAAGGGGGAGTTGGAAGA...TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp CAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTAAGACTCTGCATTCCTTaGCCTGTGGCTGAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: QIFCTHREATQLKPPLVVRLCIP*PVAEWP
Trigger: GGGCCACTCAGCCACAGGCAAAGGAATGCAGAGTCT...TACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp CAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTATAGGGGGCTCATATTTTCAGGCTATCAGGTCCTaGAGCTTCTCAATCTGCCCA +
Preference number: 5 (lower is better)
Translates to: QRSHPIKTTSGGIGGSYFQAIRS*SFSICP
Trigger: TGGGCAGATTGAGAAGCTCAAGGACCTGATAGCCTG...AAAATATGAGCCCCCTATACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp ACAAAGTATGCCAGTAAACTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGGTCAGCTTCCTCGTGTaGCTGTCCCTCAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: TKYASKLRVLSGETYGHRVSFLV*LSLSSM
Trigger: CATGGAGCTGAGGGACAGCAACACGAGGAAGCTGAC...CCTATGACCATACGTTTCTCCACTCAAAACTCTGAGTTTACTGGCATACTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTTTTTCCTTCAGTTGCTaGAAGCAGGCTTCCATGCGC +
Preference number: 5 (lower is better)
Translates to: KGKSFRARLRLSERLTCSFSFSC*KQASMR
Trigger: GCGCATGGAAGCCTGCTTCAAGCAACTGAAGGAAAA...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp AGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAAATGGGGGTGGCTGCAAACTaGGCTTGTCTGTTGATATCC +
Preference number: 5 (lower is better)
Translates to: RVLSGETYGHRPKSQWKMGVAAN*ACLLIS
Trigger: GGATATCAACAGACAAGCCAAGTTTGCAGCCACCCC...CATTTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp GGCTGCGATGTGACAGGGAGCAGCATCCATACATCAGCTTCATCGAACATAAGCTTTGTTTATGACAGTTaGAAGGAAGTCATTCTCCCC +
Preference number: 5 (lower is better)
Translates to: GCDVTGSSIHTSASSNISFVYDS*KEVILP
Trigger: GGGGAGAATGACTTCCTTCAAACTGTCATAAACAAA...GCTTATGTTCGATGAAGCTGATGTATGGATGCTGCTCCCTGTCACATCGCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp CTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAATTGAGATTTCTCCTCTaGCAGTCTCTCCTCCACTTG +
Preference number: 5 (lower is better)
Translates to: LRVLSGETYGHRPKSQWKLRFLL*QSLLHL
Trigger: CAAGTGGAGGAGAGACTGCAAGAGGAGAAATCTCAA...TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp CTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAACACAAACCTTGTCCCTaGTGGTTGACTTCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: LRVLSGETYGHRPKSQWKHKPCP*WLTSLA
Trigger: AGCCAAAGAAGTCAACCACAAGGGACAAGGTTTGTG...TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp ACCGTATATACAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTCTTCCAACTCCCCCTaGGTACTAGGGAGGCTCAAG +
Preference number: 5 (lower is better)
Translates to: TVYTNILYTQRSHPIKTTSSNSP*VLGRLK
Trigger: CTTGAGCCTCCCTAGTACCAAGGGGGAGTTGGAAGA...GGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTGTATATACGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp ACAAAGTATGCCAGTAAACTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCTTGTCCCTTGTGGTaGACTTCTTTGGCTGCAATG +
Preference number: 5 (lower is better)
Translates to: TKYASKLRVLSGETYGHRPCPLW*TSLAAM
Trigger: CATTGCAGCCAAAGAAGTCAACCACAAGGGACAAGG...CCTATGACCATACGTTTCTCCACTCAAAACTCTGAGTTTACTGGCATACTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTTTTTCAGATTTATCCTaGGAGTCCTGCGAGGATCTA +
Preference number: 5 (lower is better)
Translates to: KGKSFRARLRLSERLTCSFSDLS*ESCEDL
Trigger: TAGATCCTCGCAGGACTCCAAGGATAAATCTGAAAA...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp CAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTAGAGCGCACTATGAACTaGAAGATGTACTCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: QIFCTHREATQLKPPLVVERTMN*KMYSKA
Trigger: AGCCTTGGAGTACATCTTCAAGTTCATAGTGCGCTC...TACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp AAAGGAAAGAGTTTCAGGGCAAGACTGAGGCTATCAGAAAGGCTGACATGCTCTCAGCTCAAAGTTGGCTaGATCCAGAAATCTCTTGTT +
Preference number: 5 (lower is better)
Translates to: KGKSFRARLRLSERLTCSQLKVG*IQKSLV
Trigger: AACAAGAGATTTCTGGATCAAGCCAACTTTGAGCTG...AGAGCATGTCAGCCTTTCTGATAGCCTCAGTCTTGCCCTGAAACTCTTTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp ACCGTATATACAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCGGAGGTAAGTCTAGCTaGGGCTTCACTGTGAAGCAC +
Preference number: 5 (lower is better)
Translates to: TVYTNILYTQRSHPIKTTGGKSS*GFTVKH
Trigger: GTGCTTCACAGTGAAGCCCAAGCTAGACTTACCTCC...GGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTGTATATACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 90 bp CAGCTCAAAGTTGGCTTGATCCAGAAATCTCTTGTTCAGCATATCTaGATACTGATTAATCGCCCGCAGAAAGACTTTGTTCTGCATCGT +
Preference number: 5 (lower is better)
Translates to: QLKVGLIQKSLVQHI*ILINRPQKDFVLHR
Trigger: ACGATGCAGAACAAAGTCTTTCTGCGGGCGATTAATCAGTATGCAGATATGCTGAACAAGAGATTTCTGGATCAAGCCAACTTTGAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp AAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTTCAGAGACCTTGAGATTTCTCCTCTaGCAGTCTCTCCTCCACTTG +
Preference number: 5 (lower is better)
Translates to: KYFQQLNMKTHWSSFSETLRFLL*QSLLHL
Trigger: CAAGTGGAGGAGAGACTGCAAGAGGAGAAATCTCAA...GGTCTCTGAAAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp CTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAAATCCATGTTCTGCTTTaGAGATTTCTCCTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LRVLSGETYGHRPKSQWKIHVLL*RFLLLQ
Trigger: CTGCAAGAGGAGAAATCTCAAAAGCAGAACATGGAT...TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp AAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTTCAGAGACCTTGGTAATCCTGAACTaGACCAGCGGACCAGATAGT +
Preference number: 5 (lower is better)
Translates to: KYFQQLNMKTHWSSFSETLVILN*TSGPDS
Trigger: ACTATCTGGTCCGCTGGTCAAGTTCAGGATTACCAA...GGTCTCTGAAAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp ACCGTATATACAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTTCTGCTGCAGAAGGTaGGTGTTGGATCTCCACTTC +
Preference number: 5 (lower is better)
Translates to: TVYTNILYTQRSHPIKTTFCCRR*VLDLHF
Trigger: GAAGTGGAGATCCAACACCAACCTTCTGCAGCAGAA...GGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTGTATATACGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp CAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTAAATTCCGTGAACATTTaGCTGAGCTCCTTGGGATCA +
Preference number: 5 (lower is better)
Translates to: QIFCTHREATQLKPPLVVNSVNI*LSSLGS
Trigger: TGATCCCAAGGAGCTCAGCAAAATGTTCACGGAATT...TACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp AAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTTCAGAGACCGTGCAGCTCATCCGATaGTCTTTGTTTTCGTCATGC +
Preference number: 5 (lower is better)
Translates to: KYFQQLNMKTHWSSFSETVQLIR*SLFSSC
Trigger: GCATGACGAAAACAAAGACAATCGGATGAGCTGCAC...GGTCTCTGAAAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp CAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTATCATTTCCAATGACATaGATCACCTGGCTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: QIFCTHREATQLKPPLVVSFPMT*ITWLLG
Trigger: ACCCAAGAGCCAGGTGATCAATGTCATTGGAAATGA...TACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 90 bp ACTACGAGCTTCACAAAAGTTTCTCCTGTCTTGGCGAGGTATTTATaGTTCCTGCAGTGCTCCAGGAGGATTTTATCAAATAACACTTTG +
Preference number: 5 (lower is better)
Translates to: TTSFTKVSPVLARYL*FLQCSRRILSNNTL
Trigger: CAAAGTGTTATTTGATAAAATCCTCCTGGAGCACTGCAGGAAGCATAAATACCTCGCCAAGACAGGAGAAACTTTTGTGAAGCTCGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 90 bp TATTTTACAAACCACATTTTTGAGGTTAACAAACAAGGCCAGCGATaGGGTGGCTGCAAACTTGGCTTGTCTGTTGATATCCATGTTCTG +
Preference number: 5 (lower is better)
Translates to: YFTNHIFEVNKQGQR*GGCKLGLSVDIHVL
Trigger: CAGAACATGGATATCAACAGACAAGCCAAGTTTGCAGCCACCCCATCGCTGGCCTTGTTTGTTAACCTCAAAAATGTGGTTTGTAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp CTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAAAACTTGGCTTGTCTGTaGATATCCATGTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LRVLSGETYGHRPKSQWKNLACL*ISMFCF
Trigger: AAAGCAGAACATGGATATCAACAGACAAGCCAAGTT...TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp CTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAAACCGATCAATATCTTTaGGTAATCCTGAACTTGACC +
Preference number: 5 (lower is better)
Translates to: LRVLSGETYGHRPKSQWKTDQYL*VILNLT
Trigger: GGTCAAGTTCAGGATTACCAAAAGATATTGATCGGT...TTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp AGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAAATGCCACGTTCTTCGCAGTaGTTTTACTGCCTTTATCAA +
Preference number: 5 (lower is better)
Translates to: RVLSGETYGHRPKSQWKMPRSSQ*FYCLYQ
Trigger: TTGATAAAGGCAGTAAAACAACTGCGAAGAACGTGG...CATTTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp AGAGTTTTGAGTGGAGAAACGTATGGTCATAGGCCAAAGTCACAGTGGAAAATGTTTTCAGATTTATCCTaGGAGTCCTGCGAGGATCTA +
Preference number: 5 (lower is better)
Translates to: RVLSGETYGHRPKSQWKMFSDLS*ESCEDL
Trigger: TAGATCCTCGCAGGACTCCAAGGATAAATCTGAAAA...CATTTTCCACTGTGACTTTGGCCTATGACCATACGTTTCTCCACTCAAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp CAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTCTGGTGGTACATCTCTCTATTATCTaGCACATAAAGTTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: QIFCTHREATQLKPPLVVHLSII*HIKLPP
Trigger: TGGAGGCAACTTTATGTGCAAGATAATAGAGAGATG...TACCACCAGAGGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp ACAAAGTATGCCAGTAAACTCAGAGTTTTGAGTGGAGAAACGTATGGTCATAGGTTGTGGTTGACTTCTTaGGCTGCAATGACTTTGTTT +
Preference number: 5 (lower is better)
Translates to: TKYASKLRVLSGETYGHRLWLTS*AAMTLF
Trigger: AAACAAAGTCATTGCAGCCAAAGAAGTCAACCACAA...CCTATGACCATACGTTTCTCCACTCAAAACTCTGAGTTTACTGGCATACTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp AAGATAAATGGAAGGTGTGAAGGAGAACGTGGATTTATTCCAAAATGTAAGGCTGATGACGGTTTCATGTaGCCCTTTTCCTTCAACAAT +
Preference number: 5 (lower is better)
Translates to: KINGRCEGERGFIPKCKADDGFM*PFSFNN
Trigger: ATTGTTGAAGGAAAAGGGCAACATGAAACCGTCATC...AGCCTTACATTTTGGAATAAATCCACGTTCTCCTTCACACCTTCCATTTATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211593.2
CDS-3UTR CAA 90 bp ACCGTATATACAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCTTGTGGTTGACTTCTTaGGCTGCAATGACTTTGTTT +
Preference number: 5 (lower is better)
Translates to: TVYTNILYTQRSHPIKTTLWLTS*AAMTLF
Trigger: AAACAAAGTCATTGCAGCCAAAGAAGTCAACCACAA...GGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTGTATATACGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp TTAGAAAACAAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTAAGGCTTTTATGGCTTaGTACAGCTGCTCGTTGACT +
Preference number: 5 (lower is better)
Translates to: LENKYFQQLNMKTHWSSFKAFMA*YSCSLT
Trigger: AGTCAACGAGCAGCTGTACAAAGCCATAAAAGCCTT...AAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTTGTTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp AAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTTCAGAGACCACCATGAAGACAGATTaGACTTCAAACCACCTTAAA +
Preference number: 5 (lower is better)
Translates to: KYFQQLNMKTHWSSFSETTMKTD*TSNHLK
Trigger: TTTAAGGTGGTTTGAAGTCAAATCTGTCTTCATGGT...GGTCTCTGAAAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp TTAGAAAACAAATATTTCCAGCAGTTAAACATGAAGACACACTGGAGCTCGTTTAAAGTTTCTCCTGTCTaGGCGAGGTATTTATGCTTC +
Preference number: 5 (lower is better)
Translates to: LENKYFQQLNMKTHWSSFKVSPV*ARYLCF
Trigger: GAAGCATAAATACCTCGCCAAGACAGGAGAAACTTT...AAACGAGCTCCAGTGTGTCTTCATGTTTAACTGCTGGAAATATTTGTTTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS-3UTR CAA 90 bp ACCGTATATACAAATATTCTGTACACACAGAGAAGCCACCCAATTAAAACCACCATATTCGCAAATTCATaGTCTGGGTTTTTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: TVYTNILYTQRSHPIKTTIFANS*SGFFSP
Trigger: AGGAGAGAAAAACCCAGACAATGAATTTGCGAATAT...GGTGGTTTTAATTGGGTGGCTTCTCTGTGTGTACAGAATATTTGTATATACGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 90 bp GAGGTCTGCTTTCGGGTCGTCTTCGGAGGGGGAGGAGGTGGTGTTTaGCTGGGCAGTGGAGGTGGCTGTTGCCGTTGTGGGGGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: EVCFRVVFGGGGGGV*LGSGGGCCRCGGGG
Trigger: TCCTCCTCCCCCACAACGGCAACAGCCACCTCCACTGCCCAGCAAAACACCACCTCCTCCCCCTCCGAAGACGACCCGAAAGCAGACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 72 bp AAGGTCGCCGCAGCCCCGAAGTCAGCTTCCTCGTGTTaGTGTCCCTCAGCTCCATGCGACCGACACGGACAA +
Preference number: 6 (lower is better)
Translates to: KVAAAPKSASSC*CPSAPCDRHGQ
Trigger: TTGTCCGTGTCGGTCGCATGGAGCTGAGGGACAGCAACACGAGGAAGCTGACTTCGGGGCTGCGGCGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CCA 72 bp CAGACTGGGCTGAATGCTGAAGCTGAGCTTGGCTCTTaGTGTGACTGGAGGGGGCGTCTGCTGGGAGGACGG +
Preference number: 6 (lower is better)
Translates to: QTGLNAEAELGS*CDWRGRLLGGR
Trigger: CCGTCCTCCCAGCAGACGCCCCCTCCAGTCACACCAAGAGCCAAGCTCAGCTTCAGCATTCAGCCCAGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 72 bp AAAGGTCGCCGCAGCCCCGAAGTCAGCTTCCTCGTGTaGCTGTCCCTCAGCTCCATGCGACCGACACGGACA +
Preference number: 6 (lower is better)
Translates to: KGRRSPEVSFLV*LSLSSMRPTRT
Trigger: TGTCCGTGTCGGTCGCATGGAGCTGAGGGACAGCAACACGAGGAAGCTGACTTCGGGGCTGCGGCGACCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS TCA 72 bp GTCCCTGTGTTGTCGCCTGGAACCCGTCCCGCTGAGTaGGGTGAGCTGCACACACGTCCTCTGACCACTTTA +
Preference number: 6 (lower is better)
Translates to: VPVLSPGTRPAE*GELHTRPLTTL
Trigger: TAAAGTGGTCAGAGGACGTGTGTGCAGCTCACCTCACTCAGCGGGACGGGTTCCAGGCGACAACACAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 72 bp AAGCCACTGACAGGGGCCGGGAGGATGATGGCATGGTaGAAGATCGCACCATTGAACGTGGACGGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: KPLTGAGRMMAW*KIAPLNVDGCL
Trigger: GAGGCAGCCGTCCACGTTCAATGGTGCGATCTTTCACCATGCCATCATCCTCCCGGCCCCTGTCAGTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 72 bp GACAGGGGGTTGATAGGCAGGCCCGGGTCATCCAGGTaGTGCTGGACCATGCTGCTGATCTTGTCATTGGTC +
Preference number: 6 (lower is better)
Translates to: DRGLIGRPGSSR*CWTMLLILSLV
Trigger: GACCAATGACAAGATCAGCAGCATGGTCCAGCAGCACCTGGATGACCCGGGCCTGCCTATCAACCCCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 72 bp TCCTGCGAGGATCTATGGCGGAAGGTGAATCGAAGGTaGCTCCGGTTCACGTCCTCAATGGGGATGGCCACC +
Preference number: 6 (lower is better)
Translates to: SCEDLWRKVNRR*LRFTSSMGMAT
Trigger: GGTGGCCATCCCCATTGAGGACGTGAACCGGAGTCACCTTCGATTCACCTTCCGCCATAGATCCTCGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS TCA 72 bp CTTCAGGGCTGCCCCCTTCACCCTGACTGTGAGCTCTaGCAGGCTGCTCATCATGTCGTTGATGGACCGGAA +
Preference number: 6 (lower is better)
Translates to: LQGCPLHPDCEL*QAAHHVVDGPE
Trigger: TTCCGGTCCATCAACGACATGATGAGCAGCCTGTCAGAGCTCACAGTCAGGGTGAAGGGGGCAGCCCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 72 bp AGGGGGTTGATAGGCAGGCCCGGGTCATCCAGGTGCTaGTGGACCATGCTGCTGATCTTGTCATTGGTCAAC +
Preference number: 6 (lower is better)
Translates to: RGLIGRPGSSRC*WTMLLILSLVN
Trigger: GTTGACCAATGACAAGATCAGCAGCATGGTCCAGCAGCACCTGGATGACCCGGGCCTGCCTATCAACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 72 bp ACTCCAAGGCTTTTATGGCTTTGTACAGCTGCTCGTTaGCTCCCGGCTTCTCTGCGCTGGCCACGTAGGTCC +
Preference number: 6 (lower is better)
Translates to: TPRLLWLCTAAR*LPASLRWPRRS
Trigger: GGACCTACGTGGCCAGCGCAGAGAAGCCGGGAGTCAACGAGCAGCTGTACAAAGCCATAAAAGCCTTGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 72 bp CTAAGCAGCGTCTCCATGATGATCTGGACGTGCCTCTaGGTCGGTCCCACATCCTTCCGGTATAGCACCTCC +
Preference number: 6 (lower is better)
Translates to: LSSVSMMIWTCL*VGPTSFRYSTS
Trigger: GGAGGTGCTATACCGGAAGGATGTGGGACCGACTCAGAGGCACGTCCAGATCATCATGGAGACGCTGCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 72 bp GGCCCGGGTCATCCAGGTGCTGCTGGACCATGCTGCTaGTCTTGTCATTGGTCAACTGCATTGTCTCGATGG +
Preference number: 6 (lower is better)
Translates to: GPGHPGAAGPCC*SCHWSTALSRW
Trigger: CCATCGAGACAATGCAGTTGACCAATGACAAGATCAGCAGCATGGTCCAGCAGCACCTGGATGACCCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 90 bp CCACCGTCCACCTTCATCAACTGCCTCAAGTTCTGCTGCAGAAGGTaGGTGTTGGATCTCCACTTCAACAGCCCCAGGAGGTCCACGTTC +
Preference number: 6 (lower is better)
Translates to: PPSTFINCLKFCCRR*VLDLHFNSPRRSTF
Trigger: GAACGTGGACCTCCTGGGGCTGTTGAAGTGGAGATCCAACACCAACCTTCTGCAGCAGAACTTGAGGCAGTTGATGAAGGTGGACGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CAA 90 bp CCCTTCACCCTGACTGTGAGCTCTGACAGGCTGCTCATCATGTCGTaGATGGACCGGAACAGCTGCAACAAGGACTCCACGAAGTCAGCT +
Preference number: 6 (lower is better)
Translates to: PFTLTVSSDRLLIMS*MDRNSCNKDSTKSA
Trigger: AGCTGACTTCGTGGAGTCCTTGTTGCAGCTGTTCCGGTCCATCAACGACATGATGAGCAGCCTGTCAGAGCTCACAGTCAGGGTGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 72 bp CTCCCAAGACTCTGCATTCCTTTGCCTGTGGCTGAGTaGCCCTTTTCTTCCAACTCCCCCTTGGTACTAGGG +
Preference number: 6 (lower is better)
Translates to: LPRLCIPLPVAE*PFSSNSPLVLG
Trigger: CCCTAGTACCAAGGGGGAGTTGGAAGAAAAGGGCCACTCAGCCACAGGCAAAGGAATGCAGAGTCTTGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CCA 72 bp GATCTCCACTTCAACAGCCCCAGGAGGTCCACGTTCTaGGTCAGTTTCGTGGAACACACCAGAGTGGAGATC +
Preference number: 6 (lower is better)
Translates to: DLHFNSPRRSTF*VSFVEHTRVEI
Trigger: GATCTCCACTCTGGTGTGTTCCACGAAACTGACCCAGAACGTGGACCTCCTGGGGCTGTTGAAGTGGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CCA 72 bp TCCTTCAGTTGCTTGAAGCAGGCTTCCATGCGCTCGTaGAATGGCCTCAGGGCCTCTGTGACTTTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: SFSCLKQASMRS*NGLRASVTLSP
Trigger: TGGAGACAAAGTCACAGAGGCCCTGAGGCCATTCCACGAGCGCATGGAAGCCTGCTTCAAGCAACTGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 72 bp ATAATCTGCCATGTTGCCTTTGAGGGGCAGAGGGGGTaGGACATCGGCCACATCCATTCCCATCATGCCGTT +
Preference number: 6 (lower is better)
Translates to: IICHVAFEGQRG*DIGHIHSHHAV
Trigger: AACGGCATGATGGGAATGGATGTGGCCGATGTCCCACCCCCTCTGCCCCTCAAAGGCAACATGGCAGATTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 72 bp CCTGTGGCTGAGTGGCCCTTTTCTTCCAACTCCCCCTaGGTACTAGGGAGGCTCAAGTATGTGGCTGCATCT +
Preference number: 6 (lower is better)
Translates to: PVAEWPFSSNSP*VLGRLKYVAAS
Trigger: AGATGCAGCCACATACTTGAGCCTCCCTAGTACCAAGGGGGAGTTGGAAGAAAAGGGCCACTCAGCCACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CAA 90 bp TCCACCTTCATCAACTGCCTCAAGTTCTGCTGCAGAAGGTTGGTGTaGGATCTCCACTTCAACAGCCCCAGGAGGTCCACGTTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: STFINCLKFCCRRLV*DLHFNSPRRSTFWV
Trigger: GACCCAGAACGTGGACCTCCTGGGGCTGTTGAAGTGGAGATCCAACACCAACCTTCTGCAGCAGAACTTGAGGCAGTTGATGAAGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS TCA 72 bp TATCCTTGGAGTCCTGCGAGGATCTATGGCGGAAGGTaGATCGAAGGTGACTCCGGTTCACGTCCTCAATGG +
Preference number: 6 (lower is better)
Translates to: YPWSPARIYGGR*IEGDSGSRPQW
Trigger: CCATTGAGGACGTGAACCGGAGTCACCTTCGATTCACCTTCCGCCATAGATCCTCGCAGGACTCCAAGGATA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS GCA 72 bp AAGATGTACTCCAAGGCTTTTATGGCTTTGTACAGCTaGTCGTTGACTCCCGGCTTCTCTGCGCTGGCCACG +
Preference number: 6 (lower is better)
Translates to: KMYSKAFMALYS*SLTPGFSALAT
Trigger: CGTGGCCAGCGCAGAGAAGCCGGGAGTCAACGAGCAGCTGTACAAAGCCATAAAAGCCTTGGAGTACATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 72 bp GGATCGTCCTTGTCTAGCTTGTCCTGGGACCTGGAGTaGATCTTCTTCGGCAGCAGAGGCTCTAGAGCAAAT +
Preference number: 6 (lower is better)
Translates to: GSSLSSLSWDLE*IFFGSRGSRAN
Trigger: ATTTGCTCTAGAGCCTCTGCTGCCGAAGAAGATGCACTCCAGGTCCCAGGACAAGCTAGACAAGGACGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 72 bp TGGTACAACTCCCAAGACTCTGCATTCCTTTGCCTGTaGCTGAGTGGCCCTTTTCTTCCAACTCCCCCTTGG +
Preference number: 6 (lower is better)
Translates to: WYNSQDSAFLCL*LSGPFLPTPPW
Trigger: CCAAGGGGGAGTTGGAAGAAAAGGGCCACTCAGCCACAGGCAAAGGAATGCAGAGTCTTGGGAGTTGTACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CCA 72 bp TCTAGCTTGGGCTTCACTGTGAAGCACTGGATGTACTaGCCGGGAGAAGTCTTAATGTCATCGCCCGGTGGA +
Preference number: 6 (lower is better)
Translates to: SSLGFTVKHWMY*PGEVLMSSPGG
Trigger: TCCACCGGGCGATGACATTAAGACTTCTCCCGGCCAGTACATCCAGTGCTTCACAGTGAAGCCCAAGCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 72 bp CAGTTGCTTGAAGCAGGCTTCCATGCGCTCGTGGAATaGCCTCAGGGCCTCTGTGACTTTGTCTCCATGAAT +
Preference number: 6 (lower is better)
Translates to: QLLEAGFHALVE*PQGLCDFVSMN
Trigger: ATTCATGGAGACAAAGTCACAGAGGCCCTGAGGCCATTCCACGAGCGCATGGAAGCCTGCTTCAAGCAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 72 bp TATCTGGATCGTCCTTGTCTAGCTTGTCCTGGGACCTaGAGTGCATCTTCTTCGGCAGCAGAGGCTCTAGAG +
Preference number: 6 (lower is better)
Translates to: YLDRPCLACPGT*SASSSAAEALE
Trigger: CTCTAGAGCCTCTGCTGCCGAAGAAGATGCACTCCAGGTCCCAGGACAAGCTAGACAAGGACGATCCAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 72 bp CTGAGCTCCTTGGGATCAAACACCAACTTCACATCATaGACGATCGTCGGCAAGTACTTCAGGGCTGCCCCC +
Preference number: 6 (lower is better)
Translates to: LSSLGSNTNFTS*TIVGKYFRAAP
Trigger: GGGGGCAGCCCTGAAGTACTTGCCGACGATCGTCAATGATGTGAAGTTGGTGTTTGATCCCAAGGAGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 90 bp GGGGATGGCCACCTTAAGGGTCTCAAACCAGCGAGGCTGCTTCACTaGATAATAAATCACCGATTTGTACTCGGAGATCGCCTCGTCGCC +
Preference number: 6 (lower is better)
Translates to: GDGHLKGLKPARLLH*IINHRFVLGDRLVA
Trigger: GGCGACGAGGCGATCTCCGAGTACAAATCGGTGATTTATTATCAAGTGAAGCAGCCTCGCTGGTTTGAGACCCTTAAGGTGGCCATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CAA 90 bp GACCGGAACAGCTGCAACAAGGACTCCACGAAGTCAGCTTCCCCCTaGTTTTCATACAGCTGGTTGAACAGTACCCGTGAGCGCACTATG +
Preference number: 6 (lower is better)
Translates to: DRNSCNKDSTKSASP*FSYSWLNSTRERTM
Trigger: CATAGTGCGCTCACGGGTACTGTTCAACCAGCTGTATGAAAACAAGGGGGAAGCTGACTTCGTGGAGTCCTTGTTGCAGCTGTTCCGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 72 bp ACAACTCCCAAGACTCTGCATTCCTTTGCCTGTGGCTaGGTGGCCCTTTTCTTCCAACTCCCCCTTGGTACT +
Preference number: 6 (lower is better)
Translates to: TTPKTLHSFACG*VALFFQLPLGT
Trigger: AGTACCAAGGGGGAGTTGGAAGAAAAGGGCCACTCAGCCACAGGCAAAGGAATGCAGAGTCTTGGGAGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS TCA 72 bp CAGCCAAAAATGGAATCTGCCAGGCTATCAGGTCCTTaGGCTTCTCAATCTGCCCATGGGCCTCAGGATGCT +
Preference number: 6 (lower is better)
Translates to: QPKMESARLSGP*ASQSAHGPQDA
Trigger: AGCATCCTGAGGCCCATGGGCAGATTGAGAAGCTCAAGGACCTGATAGCCTGGCAGATTCCATTTTTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 72 bp TTCTCTTTATCTGGATCGTCCTTGTCTAGCTTGTCCTaGGACCTGGAGTGCATCTTCTTCGGCAGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: FSLSGSSLSSLS*DLECIFFGSRG
Trigger: GCCTCTGCTGCCGAAGAAGATGCACTCCAGGTCCCAGGACAAGCTAGACAAGGACGATCCAGATAAAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 72 bp GAGAAGCGCCTTTCATTTCCAATGACATTGATCACCTaGCTCTTGGGTCTTTGGGGCCGCAGGGGACTTATC +
Preference number: 6 (lower is better)
Translates to: EKRLSFPMTLIT*LLGLWGRRGLI
Trigger: GATAAGTCCCCTGCGGCCCCAAAGACCCAAGAGCCAGGTGATCAATGTCATTGGAAATGAAAGGCGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 72 bp TCAGCCAAAAATGGAATCTGCCAGGCTATCAGGTCCTaGAGCTTCTCAATCTGCCCATGGGCCTCAGGATGC +
Preference number: 6 (lower is better)
Translates to: SAKNGICQAIRS*SFSICPWASGC
Trigger: GCATCCTGAGGCCCATGGGCAGATTGAGAAGCTCAAGGACCTGATAGCCTGGCAGATTCCATTTTTGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 90 bp ATTCCTTTGCCTGTGGCTGAGTGGCCCTTTTCTTCCAACTCCCCCTaGGTACTAGGGAGGCTCAAGTATGTGGCTGCATCTTCGAGCTTT +
Preference number: 6 (lower is better)
Translates to: IPLPVAEWPFSSNSP*VLGRLKYVAASSSF
Trigger: AAAGCTCGAAGATGCAGCCACATACTTGAGCCTCCCTAGTACCAAGGGGGAGTTGGAAGAAAAGGGCCACTCAGCCACAGGCAAAGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CAA 90 bp ATGGTCCTGACGCCATATTGCTTTTCCACTTTTTCCTTCAGTTGCTaGAAGCAGGCTTCCATGCGCTCGTGGAATGGCCTCAGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: MVLTPYCFSTFSFSC*KQASMRSWNGLRAS
Trigger: AGAGGCCCTGAGGCCATTCCACGAGCGCATGGAAGCCTGCTTCAAGCAACTGAAGGAAAAAGTGGAAAAGCAATATGGCGTCAGGACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 90 bp AACATTTTGCTGAGCTCCTTGGGATCAAACACCAACTTCACATCATaGACGATCGTCGGCAAGTACTTCAGGGCTGCCCCCTTCACCCTG +
Preference number: 6 (lower is better)
Translates to: NILLSSLGSNTNFTS*TIVGKYFRAAPFTL
Trigger: CAGGGTGAAGGGGGCAGCCCTGAAGTACTTGCCGACGATCGTCAATGATGTGAAGTTGGTGTTTGATCCCAAGGAGCTCAGCAAAATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 72 bp TCCTTCTTCTCTTTATCTGGATCGTCCTTGTCTAGCTaGTCCTGGGACCTGGAGTGCATCTTCTTCGGCAGC +
Preference number: 6 (lower is better)
Translates to: SFFSLSGSSLSS*SWDLECIFFGS
Trigger: GCTGCCGAAGAAGATGCACTCCAGGTCCCAGGACAAGCTAGACAAGGACGATCCAGATAAAGAGAAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 72 bp CGCCTTTCATTTCCAATGACATTGATCACCTGGCTCTaGGGTCTTTGGGGCCGCAGGGGACTTATCGTTTCA +
Preference number: 6 (lower is better)
Translates to: RLSFPMTLITWL*GLWGRRGLIVS
Trigger: TGAAACGATAAGTCCCCTGCGGCCCCAAAGACCCAAGAGCCAGGTGATCAATGTCATTGGAAATGAAAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 90 bp AAAGAGTCTTTGCTGATGGTACAACTCCCAAGACTCTGCATTCCTTaGCCTGTGGCTGAGTGGCCCTTTTCTTCCAACTCCCCCTTGGTA +
Preference number: 6 (lower is better)
Translates to: KESLLMVQLPRLCIP*PVAEWPFSSNSPLV
Trigger: TACCAAGGGGGAGTTGGAAGAAAAGGGCCACTCAGCCACAGGCAAAGGAATGCAGAGTCTTGGGAGTTGTACCATCAGCAAAGACTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CAA 90 bp ACAGAGAAGCGCCTTTCATTTCCAATGACATTGATCACCTGGCTCTaGGGTCTTTGGGGCCGCAGGGGACTTATCGTTTCAGAAAGGATC +
Preference number: 6 (lower is better)
Translates to: TEKRLSFPMTLITWL*GLWGRRGLIVSERI
Trigger: GATCCTTTCTGAAACGATAAGTCCCCTGCGGCCCCAAAGACCCAAGAGCCAGGTGATCAATGTCATTGGAAATGAAAGGCGCTTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 72 bp TGCAGCTCATCCGATTGTCTTTGTTTTCGTCATGCATaGTGGTCCTGTAGTCCAGGAGCCTCTCCATCAACC +
Preference number: 6 (lower is better)
Translates to: CSSSDCLCFRHA*WSCSPGASPST
Trigger: GGTTGATGGAGAGGCTCCTGGACTACAGGACCATCATGCATGACGAAAACAAAGACAATCGGATGAGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 72 bp TGGAATGGCCTCAGGGCCTCTGTGACTTTGTCTCCATaGATCCTGATCCCTTCAGCCAAAAATGGAATCTGC +
Preference number: 6 (lower is better)
Translates to: WNGLRASVTLSP*ILIPSAKNGIC
Trigger: GCAGATTCCATTTTTGGCTGAAGGGATCAGGATTCATGGAGACAAAGTCACAGAGGCCCTGAGGCCATTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 72 bp AACTTCACCACTTCACCACCGTCCACCTTCATCAACTaGCTCAAGTTCTGCTGCAGAAGGTTGGTGTTGGAT +
Preference number: 6 (lower is better)
Translates to: NFTTSPPSTFIN*LKFCCRRLVLD
Trigger: ATCCAACACCAACCTTCTGCAGCAGAACTTGAGGCAGTTGATGAAGGTGGACGGTGGTGAAGTGGTGAAGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS GCA 72 bp CTTATCGTTTCAGAAAGGATCACAGCCTCAGACTGCTaGAGGGAGCTGTCAGCGGGCTTGAATTCCTTATCA +
Preference number: 6 (lower is better)
Translates to: LIVSERITASDC*RELSAGLNSLS
Trigger: TGATAAGGAATTCAAGCCCGCTGACAGCTCCCTGCAGCAGTCTGAGGCTGTGATCCTTTCTGAAACGATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 72 bp CTGTCCCTCAGCTCCATGCGACCGACACGGACAATCTaGCAGACGAAACTAATTTTCTCCCTTTTCAAGTCT +
Preference number: 6 (lower is better)
Translates to: LSLSSMRPTRTI*QTKLIFSLFKS
Trigger: AGACTTGAAAAGGGAGAAAATTAGTTTCGTCTGCCAGATTGTCCGTGTCGGTCGCATGGAGCTGAGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CCA 72 bp TCCACGAAGTCAGCTTCCCCCTTGTTTTCATACAGCTaGTTGAACAGTACCCGTGAGCGCACTATGAACTTG +
Preference number: 6 (lower is better)
Translates to: STKSASPLFSYS*LNSTRERTMNL
Trigger: CAAGTTCATAGTGCGCTCACGGGTACTGTTCAACCAGCTGTATGAAAACAAGGGGGAAGCTGACTTCGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 72 bp ACCGCACTACGAGCTTCACAAAAGTTTCTCCTGTCTTaGCGAGGTATTTATGCTTCCTGCAGTGCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: TALRASQKFLLS*RGIYASCSAPG
Trigger: TCCTGGAGCACTGCAGGAAGCATAAATACCTCGCCAAGACAGGAGAAACTTTTGTGAAGCTCGTAGTGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 72 bp AACCGCACTACGAGCTTCACAAAAGTTTCTCCTGTCTaGGCGAGGTATTTATGCTTCCTGCAGTGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: NRTTSFTKVSPV*ARYLCFLQCSR
Trigger: CCTGGAGCACTGCAGGAAGCATAAATACCTCGCCAAGACAGGAGAAACTTTTGTGAAGCTCGTAGTGCGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 72 bp ACGCCATATTGCTTTTCCACTTTTTCCTTCAGTTGCTaGAAGCAGGCTTCCATGCGCTCGTGGAATGGCCTC +
Preference number: 6 (lower is better)
Translates to: TPYCFSTFSFSC*KQASMRSWNGL
Trigger: GAGGCCATTCCACGAGCGCATGGAAGCCTGCTTCAAGCAACTGAAGGAAAAAGTGGAAAAGCAATATGGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 72 bp CACTTGAAAAATTCTCCAGTTGCAGGGACTCTTGAGTaGGGAAAGCCACGGCCAGGTGAAAGTAGTTGTTCC +
Preference number: 6 (lower is better)
Translates to: HLKNSPVAGTLE*GKPRPGESSCS
Trigger: GGAACAACTACTTTCACCTGGCCGTGGCTTTCCTCACTCAAGAGTCCCTGCAACTGGAGAATTTTTCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 72 bp AAAGAGTCTTTGCTGATGGTACAACTCCCAAGACTCTaGATTCCTTTGCCTGTGGCTGAGTGGCCCTTTTCT +
Preference number: 6 (lower is better)
Translates to: KESLLMVQLPRL*IPLPVAEWPFS
Trigger: AGAAAAGGGCCACTCAGCCACAGGCAAAGGAATGCAGAGTCTTGGGAGTTGTACCATCAGCAAAGACTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CCA 72 bp TGGGTCAGTTTCGTGGAACACACCAGAGTGGAGATCTaGAAAGAGTCTTTGCTGATGGTACAACTCCCAAGA +
Preference number: 6 (lower is better)
Translates to: WVSFVEHTRVEI*KESLLMVQLPR
Trigger: TCTTGGGAGTTGTACCATCAGCAAAGACTCTTTCCAGATCTCCACTCTGGTGTGTTCCACGAAACTGACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CAA 72 bp ATTTCCAATGACATTGATCACCTGGCTCTTGGGTCTTaGGGGCCGCAGGGGACTTATCGTTTCAGAAAGGAT +
Preference number: 6 (lower is better)
Translates to: ISNDIDHLALGS*GPQGTYRFRKD
Trigger: ATCCTTTCTGAAACGATAAGTCCCCTGCGGCCCCAAAGACCCAAGAGCCAGGTGATCAATGTCATTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 90 bp CTCTCCATCAACCGCACTACGAGCTTCACAAAAGTTTCTCCTGTCTaGGCGAGGTATTTATGCTTCCTGCAGTGCTCCAGGAGGATTTTA +
Preference number: 6 (lower is better)
Translates to: LSINRTTSFTKVSPV*ARYLCFLQCSRRIL
Trigger: TAAAATCCTCCTGGAGCACTGCAGGAAGCATAAATACCTCGCCAAGACAGGAGAAACTTTTGTGAAGCTCGTAGTGCGGTTGATGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 72 bp CCAGCGATGGGGTGGCTGCAAACTTGGCTTGTCTGTTaGTATCCATGTTCTGCTTTTGAGATTTCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: PAMGWLQTWLVC*YPCSAFEISPL
Trigger: AAGAGGAGAAATCTCAAAAGCAGAACATGGATATCAACAGACAAGCCAAGTTTGCAGCCACCCCATCGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS GCA 72 bp TTTGAGGTTAACAAACAAGGCCAGCGATGGGGTGGCTaGAAACTTGGCTTGTCTGTTGATATCCATGTTCTG +
Preference number: 6 (lower is better)
Translates to: FEVNKQGQRWGG*KLGLSVDIHVL
Trigger: CAGAACATGGATATCAACAGACAAGCCAAGTTTGCAGCCACCCCATCGCTGGCCTTGTTTGTTAACCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CAA 72 bp CACCTTAAGGGTCTCAAACCAGCGAGGCTGCTTCACTaGATAATAAATCACCGATTTGTACTCGGAGATCGC +
Preference number: 6 (lower is better)
Translates to: HLKGLKPARLLH*IINHRFVLGDR
Trigger: GCGATCTCCGAGTACAAATCGGTGATTTATTATCAAGTGAAGCAGCCTCGCTGGTTTGAGACCCTTAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS TCA 72 bp AATCCACGACATCTGTCCTCATTTTCCCAAAGGTCTTaGTCAGGTGTGCATAATGGTAGTCTTCCATCTGCC +
Preference number: 6 (lower is better)
Translates to: NPRHLSSFSQRS*SGVHNGSLPSA
Trigger: GGCAGATGGAAGACTACCATTATGCACACCTGATCAAGACCTTTGGGAAAATGAGGACAGATGTCGTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CCA 72 bp AACCACATTTTTGAGGTTAACAAACAAGGCCAGCGATaGGGTGGCTGCAAACTTGGCTTGTCTGTTGATATC +
Preference number: 6 (lower is better)
Translates to: NHIFEVNKQGQR*GGCKLGLSVDI
Trigger: GATATCAACAGACAAGCCAAGTTTGCAGCCACCCCATCGCTGGCCTTGTTTGTTAACCTCAAAAATGTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS TCA 72 bp AACTTGGCTTGTCTGTTGATATCCATGTTCTGCTTTTaGGATTTCTCCTCTTGCAGTCTCTCCTCCACTTGT +
Preference number: 6 (lower is better)
Translates to: NLACLLISMFCF*DFSSCSLSSTC
Trigger: ACAAGTGGAGGAGAGACTGCAAGAGGAGAAATCTCAAAAGCAGAACATGGATATCAACAGACAAGCCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CAA 72 bp AAACTTGGCTTGTCTGTTGATATCCATGTTCTGCTTTaGAGATTTCTCCTCTTGCAGTCTCTCCTCCACTTG +
Preference number: 6 (lower is better)
Translates to: KLGLSVDIHVLL*RFLLLQSLLHL
Trigger: CAAGTGGAGGAGAGACTGCAAGAGGAGAAATCTCAAAAGCAGAACATGGATATCAACAGACAAGCCAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CAA 72 bp ACACAGCTCGCAAGTTATGTAACCGATCAATATCTTTaGGTAATCCTGAACTTGACCAGCGGACCAGATAGT +
Preference number: 6 (lower is better)
Translates to: TQLASYVTDQYL*VILNLTSGPDS
Trigger: ACTATCTGGTCCGCTGGTCAAGTTCAGGATTACCAAAAGATATTGATCGGTTACATAACTTGCGAGCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS GCA 72 bp GTTGGCTTGATCCAGAAATCTCTTGTTCAGCATATCTaGATACTGATTAATCGCCCGCAGAAAGACTTTGTT +
Preference number: 6 (lower is better)
Translates to: VGLIQKSLVQHI*ILINRPQKDFV
Trigger: AACAAAGTCTTTCTGCGGGCGATTAATCAGTATGCAGATATGCTGAACAAGAGATTTCTGGATCAAGCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 72 bp TCTCCTGTCTTGGCGAGGTATTTATGCTTCCTGCAGTaGTCCAGGAGGATTTTATCAAATAACACTTTGTAT +
Preference number: 6 (lower is better)
Translates to: SPVLARYLCFLQ*SRRILSNNTLY
Trigger: ATACAAAGTGTTATTTGATAAAATCCTCCTGGAGCACTGCAGGAAGCATAAATACCTCGCCAAGACAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 72 bp AAGTTTCTCCTGTCTTGGCGAGGTATTTATGCTTCCTaGAGTGCTCCAGGAGGATTTTATCAAATAACACTT +
Preference number: 6 (lower is better)
Translates to: KFLLSWRGIYAS*SAPGGFYQITL
Trigger: AAGTGTTATTTGATAAAATCCTCCTGGAGCACTGCAGGAAGCATAAATACCTCGCCAAGACAGGAGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS GCA 72 bp TTCACAAAAGTTTCTCCTGTCTTGGCGAGGTATTTATaGTTCCTGCAGTGCTCCAGGAGGATTTTATCAAAT +
Preference number: 6 (lower is better)
Translates to: FTKVSPVLARYL*FLQCSRRILSN
Trigger: ATTTGATAAAATCCTCCTGGAGCACTGCAGGAAGCATAAATACCTCGCCAAGACAGGAGAAACTTTTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 72 bp AAAGTAGTTGTTCCACAGCTGCAGCTCAAAGTTGGCTaGATCCAGAAATCTCTTGTTCAGCATATCTGCATA +
Preference number: 6 (lower is better)
Translates to: KVVVPQLQLKVG*IQKSLVQHICI
Trigger: TATGCAGATATGCTGAACAAGAGATTTCTGGATCAAGCCAACTTTGAGCTGCAGCTGTGGAACAACTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS TCA 72 bp ATGTCATTTCCAATATTGGGCCAACCATTTCTGGGATaGATTTTATCTTGTGTTGACCCAGGTTGTACCACA +
Preference number: 6 (lower is better)
Translates to: MSFPILGQPFLG*ILSCVDPGCTT
Trigger: TGTGGTACAACCTGGGTCAACACAAGATAAAATTCATCCCAGAAATGGTTGGCCCAATATTGGAAATGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5
CDS CAA 72 bp AATTTCAAGGTTACCCACAAACCTTGTCCCTTGTGGTaGACTTCTTTGGCTGCAATGACTTTGTTTATGACA +
Preference number: 6 (lower is better)
Translates to: NFKVTHKPCPLW*TSLAAMTLFMT
Trigger: TGTCATAAACAAAGTCATTGCAGCCAAAGAAGTCAACCACAAGGGACAAGGTTTGTGGGTAACCTTGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084488.5
ENSMUST00000211593.2
CDS CCA 72 bp AAGCTCTGTCTCAGGAATCAATGTCATTTCCAATATTaGGCCAACCATTTCTGGGATGAATTTTATCTTGTG +
Preference number: 6 (lower is better)
Translates to: KLCLRNQCHFQY*ANHFWDEFYLV
Trigger: CACAAGATAAAATTCATCCCAGAAATGGTTGGCCCAATATTGGAAATGACATTGATTCCTGAGACAGAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000084488.5