Pregenerated sensors for DOC2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020848Ensembl transcript IDs: ENSMUST00000021209.8
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCCGAGCTCGGCGGGCGGGCGGGCGGGCGGGCGGGCCACGGAGGTaGAGTTCCTCATTTTTGCCACTAGAGGTCAGGAGGTCACTGACT | + |
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Preference number: 1 (lower is better) Translates to: ARARRAGGRAGGPRR*SSSFLPLEVRRSLT Trigger: AGTCAGTGACCTCCTGACCTCTAGTGGCAAAAATGAGGAACTGCACCTCCGTGGCCCGCCCGCCCGCCCGCCCGCCCGCCGAGCTCGGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | ACAACTTGGATCTTGCCCTTGGCGGCAGCTGAGAAAGCCCAGGGTTaGACCTGTGTGGGCCGGGTGGCAAGGGTGGGTGGCAGCAGATGG | + |
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Preference number: 1 (lower is better) Translates to: TTWILPLAAAEKAQG*TCVGRVARVGGSRW Trigger: CCATCTGCTGCCACCCACCCTTGCCACCCGGCCCACACAGGTCCAACCCTGGGCTTTCTCAGCTGCCGCCAAGGGCAAGATCCAAGTTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | GGGCTGCACTGTCTATGTCCGAGCAGACAACTTGGATCTTGCCCTTaGCGGCAGCTGAGAAAGCCCAGGGTTGGACCTGTGTGGGCCGGG | + |
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Preference number: 1 (lower is better) Translates to: GLHCLCPSRQLGSCP*RQLRKPRVGPVWAG Trigger: CCCGGCCCACACAGGTCCAACCCTGGGCTTTCTCAGCTGCCGCCAAGGGCAAGATCCAAGTTGTCTGCTCGGACATAGACAGTGCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | AGGAGGTCACTGACTCTGGGTTGGAAGACGGGACTGTTCAGGGATTaGCTAACGGTGGTGGAGGGCGGGGCAGAGACCAGGACGCGAGGT | + |
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Preference number: 1 (lower is better) Translates to: RRSLTLGWKTGLFRD*LTVVEGGAETRTRG Trigger: ACCTCGCGTCCTGGTCTCTGCCCCGCCCTCCACCACCGTTAGCCAATCCCTGAACAGTCCCGTCTTCCAACCCAGAGTCAGTGACCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | GGCCTCCTAGCAGGGGCTGCACTGTCTATGTCCGAGCAGACAACTTaGATCTTGCCCTTGGCGGCAGCTGAGAAAGCCCAGGGTTGGACC | + |
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Preference number: 1 (lower is better) Translates to: GLLAGAALSMSEQTT*ILPLAAAEKAQGWT Trigger: GGTCCAACCCTGGGCTTTCTCAGCTGCCGCCAAGGGCAAGATCCAAGTTGTCTGCTCGGACATAGACAGTGCAGCCCCTGCTAGGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR TCA 90 bp | GCCGGTCCCCCAAGTTCCTTGACCTCAGGCTGGGGGTGGGACAGCTaGGTTCCAGGGCTTGGCTGTAGCCTTTGGCAAATCCTAAATGGC | + |
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Preference number: 1 (lower is better) Translates to: AGPPSSLTSGWGWDS*VPGLGCSLWQILNG Trigger: GCCATTTAGGATTTGCCAAAGGCTACAGCCAAGCCCTGGAACTCAGCTGTCCCACCCCCAGCCTGAGGTCAAGGAACTTGGGGGACCGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | GCAAGTTGGAAGCTCTGGCTGGCTACATTGTCTGTCCTGGAGTCCTaGGCTCTGCCTGCCCATTGTCCTCCCTGTAGTCTCCAGGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: ASWKLWLATLSVLES*ALPAHCPPCSLQAA Trigger: GGCTGCCTGGAGACTACAGGGAGGACAATGGGCAGGCAGAGCCCAGGACTCCAGGACAGACAATGTAGCCAGCCAGAGCTTCCAACTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR TCA 90 bp | CTAACGGTGGTGGAGGGCGGGGCAGAGACCAGGACGCGAGGTGGATaGTGGGCATCAAGAGAGGCCCTGGTTACTGACAGTACTTTGGAA | + |
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Preference number: 1 (lower is better) Translates to: LTVVEGGAETRTRGG*WASREALVTDSTLE Trigger: TTCCAAAGTACTGTCAGTAACCAGGGCCTCTCTTGATGCCCATCATCCACCTCGCGTCCTGGTCTCTGCCCCGCCCTCCACCACCGTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | GCTGAGGATTCCCCCAGCTCTGGCCAGCTTGGATGCCCAGGGAGCTaGAACAGGTATCATGTTGTGTTTTCCTGTCCCTCTGAGGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: AEDSPSSGQLGCPGS*NRYHVVFSCPSEGG Trigger: GCCTCCCTCAGAGGGACAGGAAAACACAACATGATACCTGTTCCAGCTCCCTGGGCATCCAAGCTGGCCAGAGCTGGGGGAATCCTCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR GCA 90 bp | GATGGAGCTGAGGCTGAGGATTCCCCCAGCTCTGGCCAGCTTGGATaGCCAGGGAGCTGGAACAGGTATCATGTTGTGTTTTCCTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: DGAEAEDSPSSGQLG*PGSWNRYHVVFSCP Trigger: GGGACAGGAAAACACAACATGATACCTGTTCCAGCTCCCTGGGCATCCAAGCTGGCCAGAGCTGGGGGAATCCTCAGCCTCAGCTCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR GCA 90 bp | TTCCTTGCCCTCCACCCTTCAGCAGTCAGCAGTACCCACAGCCCCTaGAGACAACTGGCTGGTTCTGGTATGCTGCACCCCTTTGTAGCA | + |
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Preference number: 1 (lower is better) Translates to: FLALHPSAVSSTHSP*RQLAGSGMLHPFVA Trigger: TGCTACAAAGGGGTGCAGCATACCAGAACCAGCCAGTTGTCTGCAGGGGCTGTGGGTACTGCTGACTGCTGAAGGGTGGAGGGCAAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR TCA 90 bp | CTGCTTCCCACCCTGCCTGTCCCTGGGATTGGCAAGGATCATCATTaGGTCCCAAACCCACTTACTGCCTGGTGCAACAGGGATCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: LLPTLPVPGIGKDHH*VPNPLTAWCNRDPG Trigger: ACCTGGATCCCTGTTGCACCAGGCAGTAAGTGGGTTTGGGACTCAATGATGATCCTTGCCAATCCCAGGGACAGGCAGGGTGGGAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR GCA 90 bp | ACAGGTATCATGTTGTGTTTTCCTGTCCCTCTGAGGGAGGCTGGGTaGTCTTGGCCTCCTAGCAGGGGCTGCACTGTCTATGTCCGAGCA | + |
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Preference number: 1 (lower is better) Translates to: TGIMLCFPVPLREAG*SWPPSRGCTVYVRA Trigger: TGCTCGGACATAGACAGTGCAGCCCCTGCTAGGAGGCCAAGAGCACCCAGCCTCCCTCAGAGGGACAGGAAAACACAACATGATACCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | ATCATGTTGTGTTTTCCTGTCCCTCTGAGGGAGGCTGGGTGCTCTTaGCCTCCTAGCAGGGGCTGCACTGTCTATGTCCGAGCAGACAAC | + |
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Preference number: 1 (lower is better) Translates to: IMLCFPVPLREAGCS*PPSRGCTVYVRADN Trigger: GTTGTCTGCTCGGACATAGACAGTGCAGCCCCTGCTAGGAGGCCAAGAGCACCCAGCCTCCCTCAGAGGGACAGGAAAACACAACATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | ATGCACAAGCAAGTTGGAAGCTCTGGCTGGCTACATTGTCTGTCCTaGAGTCCTGGGCTCTGCCTGCCCATTGTCCTCCCTGTAGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: MHKQVGSSGWLHCLS*SPGLCLPIVLPVVS Trigger: GGAGACTACAGGGAGGACAATGGGCAGGCAGAGCCCAGGACTCCAGGACAGACAATGTAGCCAGCCAGAGCTTCCAACTTGCTTGTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | CACGGAGTCTATCTGCCCATCAATGCACAAGCAAGTTGGAAGCTCTaGCTGGCTACATTGTCTGTCCTGGAGTCCTGGGCTCTGCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: HGVYLPINAQASWKL*LATLSVLESWALPA Trigger: GGCAGGCAGAGCCCAGGACTCCAGGACAGACAATGTAGCCAGCCAGAGCTTCCAACTTGCTTGTGCATTGATGGGCAGATAGACTCCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | AGCAGTCAGCAGTACCCACAGCCCCTGCAGACAACTGGCTGGTTCTaGTATGCTGCACCCCTTTGTAGCAATATGTGCACCCAGATGCCC | + |
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Preference number: 1 (lower is better) Translates to: SSQQYPQPLQTTGWF*YAAPLCSNMCTQMP Trigger: GGGCATCTGGGTGCACATATTGCTACAAAGGGGTGCAGCATACCAGAACCAGCCAGTTGTCTGCAGGGGCTGTGGGTACTGCTGACTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | CCCTTCAGCAGTCAGCAGTACCCACAGCCCCTGCAGACAACTGGCTaGTTCTGGTATGCTGCACCCCTTTGTAGCAATATGTGCACCCAG | + |
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Preference number: 1 (lower is better) Translates to: PFSSQQYPQPLQTTG*FWYAAPLCSNMCTQ Trigger: CTGGGTGCACATATTGCTACAAAGGGGTGCAGCATACCAGAACCAGCCAGTTGTCTGCAGGGGCTGTGGGTACTGCTGACTGCTGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR TCA 90 bp | CTAGCTTTCAAGCCACAGCTGGGTTTTCAAGACTGTGCTGAGCCCTaGCTCTCATGGGATGCCTTCCTTGCCCTCCACCCTTCAGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: LAFKPQLGFQDCAEP*LSWDAFLALHPSAV Trigger: GACTGCTGAAGGGTGGAGGGCAAGGAAGGCATCCCATGAGAGTCAGGGCTCAGCACAGTCTTGAAAACCCAGCTGTGGCTTGAAAGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR TCA 90 bp | TTGGGAGCTTCAAGACTGACCAGTGTCCTACCCTTTCCTAGAAACTaGGGCCAGAGTTCTCAGCTCCTGAGGGCAGAACCCCCATCCCTC | + |
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Preference number: 1 (lower is better) Translates to: LGASRLTSVLPFPRN*GQSSQLLRAEPPSL Trigger: GAGGGATGGGGGTTCTGCCCTCAGGAGCTGAGAACTCTGGCCTCAGTTTCTAGGAAAGGGTAGGACACTGGTCAGTCTTGAAGCTCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR GCA 90 bp | GGGAATCCCCGTCCCAGAGGCTCACGGAGTCTATCTGCCCATCAATaGACAAGCAAGTTGGAAGCTCTGGCTGGCTACATTGTCTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: GNPRPRGSRSLSAHQ*TSKLEALAGYIVCP Trigger: AGGACAGACAATGTAGCCAGCCAGAGCTTCCAACTTGCTTGTGCATTGATGGGCAGATAGACTCCGTGAGCCTCTGGGACGGGGATTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR GCA 90 bp | CTGCTAGAGTGGGAATCCCCGTCCCAGAGGCTCACGGAGTCTATCTaGCCATCAATGCACAAGCAAGTTGGAAGCTCTGGCTGGCTACAT | + |
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Preference number: 1 (lower is better) Translates to: LLEWESPSQRLTESI*PSMHKQVGSSGWLH Trigger: ATGTAGCCAGCCAGAGCTTCCAACTTGCTTGTGCATTGATGGGCAGATAGACTCCGTGAGCCTCTGGGACGGGGATTCCCACTCTAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | TCCTCATTTTTGCCACTAGAGGTCAGGAGGTCACTGACTCTGGGTTaGAAGACGGGACTGTTCAGGGATTGGCTAACGGTGGTGGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: SSFLPLEVRRSLTLG*KTGLFRDWLTVVEG Trigger: GCCCTCCACCACCGTTAGCCAATCCCTGAACAGTCCCGTCTTCCAACCCAGAGTCAGTGACCTCCTGACCTCTAGTGGCAAAAATGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR TCA 90 bp | GCTCCTGAATCCCAGTTGGCAGGAGGCAGTTGGGAGCTTCAAGACTaGCCAGTGTCCTACCCTTTCCTAGAAACTGAGGCCAGAGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: APESQLAGGSWELQD*PVSYPFLETEARVL Trigger: GAGAACTCTGGCCTCAGTTTCTAGGAAAGGGTAGGACACTGGTCAGTCTTGAAGCTCCCAACTGCCTCCTGCCAACTGGGATTCAGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | GAGTCTATCTGCCCATCAATGCACAAGCAAGTTGGAAGCTCTGGCTaGCTACATTGTCTGTCCTGGAGTCCTGGGCTCTGCCTGCCCATT | + |
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Preference number: 1 (lower is better) Translates to: ESICPSMHKQVGSSG*LHCLSWSPGLCLPI Trigger: AATGGGCAGGCAGAGCCCAGGACTCCAGGACAGACAATGTAGCCAGCCAGAGCTTCCAACTTGCTTGTGCATTGATGGGCAGATAGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR TCA 90 bp | TTTTCTCCTAGCTTTCAAGCCACAGCTGGGTTTTCAAGACTGTGCTaGGCCCTGACTCTCATGGGATGCCTTCCTTGCCCTCCACCCTTC | + |
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Preference number: 1 (lower is better) Translates to: FSPSFQATAGFSRLC*ALTLMGCLPCPPPF Trigger: GAAGGGTGGAGGGCAAGGAAGGCATCCCATGAGAGTCAGGGCTCAGCACAGTCTTGAAAACCCAGCTGTGGCTTGAAAGCTAGGAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR GCA 90 bp | AACATTGTTTCCCAAGTGCTTGTACACATCCCTAAGCCTAGCTCCTaGCTAAAAGCCCAATGCTGCCCTAGCGCAACCCTAGGCCCCCAT | + |
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Preference number: 1 (lower is better) Translates to: NIVSQVLVHIPKPSS*LKAQCCPSATLGPH Trigger: ATGGGGGCCTAGGGTTGCGCTAGGGCAGCATTGGGCTTTTAGGCAGGAGCTAGGCTTAGGGATGTGTACAAGCACTTGGGAAACAATGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR GCA 90 bp | CAACAGGTGGCTTGGTGCTGTGGAGAGCTAGAGACCTATTTTCCCTaGCAACTAGGGAAGGCTGGTGAGCACTGTGGATTGGAATCATGT | + |
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Preference number: 1 (lower is better) Translates to: QQVAWCCGELETYFP*QLGKAGEHCGLESC Trigger: ACATGATTCCAATCCACAGTGCTCACCAGCCTTCCCTAGTTGGCAGGGAAAATAGGTCTCTAGCTCTCCACAGCACCAAGCCACCTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | GCTCAACCAGGTGCACTTAAATATCTGCTCCTGTTTCTAGCTGTATaGGGAAAACATCAGGCCGGTCCCCCAAGTTCCTTGACCTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: AQPGALKYLLLFLAV*GKHQAGPPSSLTSG Trigger: GCCTGAGGTCAAGGAACTTGGGGGACCGGCCTGATGTTTTCCCCATACAGCTAGAAACAGGAGCAGATATTTAAGTGCACCTGGTTGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | GAACAGGAGCAGTGTGCATTGAGACCCCTTGGGAGCAAGATCAAATaGGAGAGCTTGGGTTTGAACATTGTTTCCCAAGTGCTTGTACAC | + |
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Preference number: 1 (lower is better) Translates to: EQEQCALRPLGSKIK*ESLGLNIVSQVLVH Trigger: GTGTACAAGCACTTGGGAAACAATGTTCAAACCCAAGCTCTCCCATTTGATCTTGCTCCCAAGGGGTCTCAATGCACACTGCTCCTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | TGGGAATTTACGCTGAGAACAGGAGCAGTGTGCATTGAGACCCCTTaGGAGCAAGATCAAATGGGAGAGCTTGGGTTTGAACATTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: WEFTLRTGAVCIETP*EQDQMGELGFEHCF Trigger: GAAACAATGTTCAAACCCAAGCTCTCCCATTTGATCTTGCTCCCAAGGGGTCTCAATGCACACTGCTCCTGTTCTCAGCGTAAATTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CCA 90 bp | GTGGATGATGGGCATCAAGAGAGGCCCTGGTTACTGACAGTACTTTaGAATGACCTTTGTTTTTGGTATCAAATTTCCTCTTTGCAACGC | + |
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Preference number: 1 (lower is better) Translates to: VDDGHQERPWLLTVL*NDLCFWYQISSLQR Trigger: GCGTTGCAAAGAGGAAATTTGATACCAAAAACAAAGGTCATTCCAAAGTACTGTCAGTAACCAGGGCCTCTCTTGATGCCCATCATCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR TCA 90 bp | CTCTTTGCAACGCTGATGAGCCAGAAGGAAGATACTCGTTTGGAATaGAAGACTGAACTGATTCTGAAACTTCTCAAAGGACCTTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: LFATLMSQKEDTRLE*KTELILKLLKGPFP Trigger: GGGAAAAGGTCCTTTGAGAAGTTTCAGAATCAGTTCAGTCTTTCATTCCAAACGAGTATCTTCCTTCTGGCTCATCAGCGTTGCAAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR GCA 90 bp | CAGTACTTTGGAATGACCTTTGTTTTTGGTATCAAATTTCCTCTTTaGAACGCTGATGAGCCAGAAGGAAGATACTCGTTTGGAATGAAA | + |
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Preference number: 1 (lower is better) Translates to: QYFGMTFVFGIKFPL*NADEPEGRYSFGMK Trigger: TTTCATTCCAAACGAGTATCTTCCTTCTGGCTCATCAGCGTTGCAAAGAGGAAATTTGATACCAAAAACAAAGGTCATTCCAAAGTACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGAGGCTGAGGATTCCCCCAGCTCTGGCCAGCTTGGATGCCCAGGGAGCTGCCCTTGGCGGCAGCTaGGAAAGCCCAGGGTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: ELRLRIPPALASLDAQGAALGGS*ESPGLD Trigger: GTCCAACCCTGGGCTTTCTCAGCTGCCGCCAAGGGC...AGCTCCCTGGGCATCCAAGCTGGCCAGAGCTGGGGGAATCCTCAGCCTCAGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CAA 90 bp | CAGGAGGTCACTGACTCTGGGTTGGAAGACGGGACTGTTCAGGGATaGGCTAACGGTGGTGGAGGGCGGGGCAGAGACCAGGACGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: QEVTDSGLEDGTVQG*ANGGGGRGRDQDAR Trigger: CCTCGCGTCCTGGTCTCTGCCCCGCCCTCCACCACCGTTAGCCAATCCCTGAACAGTCCCGTCTTCCAACCCAGAGTCAGTGACCTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CAA 90 bp | GGGGCTGCACTGTCTATGTCCGAGCAGACAACTTGGATCTTGCCCTaGGCGGCAGCTGAGAAAGCCCAGGGTTGGACCTGTGTGGGCCGG | + |
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Preference number: 2 (lower is better) Translates to: GAALSMSEQTTWILP*AAAEKAQGWTCVGR Trigger: CCGGCCCACACAGGTCCAACCCTGGGCTTTCTCAGCTGCCGCCAAGGGCAAGATCCAAGTTGTCTGCTCGGACATAGACAGTGCAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CAA 90 bp | CTAGCAGGGGCTGCACTGTCTATGTCCGAGCAGACAACTTGGATCTaGCCCTTGGCGGCAGCTGAGAAAGCCCAGGGTTGGACCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LAGAALSMSEQTTWI*PLAAAEKAQGWTCV Trigger: CACACAGGTCCAACCCTGGGCTTTCTCAGCTGCCGCCAAGGGCAAGATCCAAGTTGTCTGCTCGGACATAGACAGTGCAGCCCCTGCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CAA 90 bp | GTTTTCAAGACTGTGCTGAGCCCTGACTCTCATGGGATGCCTTCCTaGCCCTCCACCCTTCAGCAGTCAGCAGTACCCACAGCCCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: VFKTVLSPDSHGMPS*PSTLQQSAVPTAPA Trigger: TGCAGGGGCTGTGGGTACTGCTGACTGCTGAAGGGTGGAGGGCAAGGAAGGCATCCCATGAGAGTCAGGGCTCAGCACAGTCTTGAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGACGGGACTGTTCAGGGATTGGCTAACGGTGGTGGAGGGCGGGGCAGAGACGGGAGAGCTTGGGTTTaGACATTGTTTCCCAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: EDGTVQGLANGGGGRGRDGRAWV*TLFPKC Trigger: GCACTTGGGAAACAATGTTCAAACCCAAGCTCTCCC...GTCTCTGCCCCGCCCTCCACCACCGTTAGCCAATCCCTGAACAGTCCCGTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGACGGGACTGTTCAGGGATTGGCTAACGGTGGTGGAGGGCGGGGCAGAGACGAGACCTATTTTCCCTaGCAACTAGGGAAGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: EDGTVQGLANGGGGRGRDETYFP*QLGKAG Trigger: ACCAGCCTTCCCTAGTTGGCAGGGAAAATAGGTCTC...GTCTCTGCCCCGCCCTCCACCACCGTTAGCCAATCCCTGAACAGTCCCGTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCCAAACAAGGCTTTCTATTTTCCACTGCTGGTCCTGACTGTCTTGATAGGGCCTGTGTGGGCCGGGTaGCAAGGGTGGGTGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PPNKAFYFPLLVLTVLIGPVWAG*QGWVAA Trigger: TGCTGCCACCCACCCTTGCCACCCGGCCCACACAGG...CCCTATCAAGACAGTCAGGACCAGCAGTGGAAAATAGAAAGCCTTGTTTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR-3UTR CCA 90 bp | TCACTAAGCCCCATTAACTCCGGAGAGAGGGACCTGAGAGTCCTTGTCCTCAGAAACCCTAGGCCCCCATaGCTCCCTGTCCCCTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: SLSPINSGERDLRVLVLRNPRPP*LPVPWY Trigger: GTACCAGGGGACAGGGAGCCATGGGGGCCTAGGGTT...TCTGAGGACAAGGACTCTCAGGTCCCTCTCTCCGGAGTTAATGGGGCTTAGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CAA 90 bp | CTCTGGATGGAGCTGAGGCTGAGGATTCCCCCAGCTCTGGCCAGCTaGGATGCCCAGGGAGCTGGAACAGGTATCATGTTGTGTTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LWMELRLRIPPALAS*DAQGAGTGIMLCFP Trigger: AGGAAAACACAACATGATACCTGTTCCAGCTCCCTGGGCATCCAAGCTGGCCAGAGCTGGGGGAATCCTCAGCCTCAGCTCCATCCAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGACGGGACTGTTCAGGGATTGGCTAACGGTGGTGGAGGGCGGGGCAGAGACCTTTCAAGCCACAGCTaGGTTTTCAAGACTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: EDGTVQGLANGGGGRGRDLSSHS*VFKTVL Trigger: CAGCACAGTCTTGAAAACCCAGCTGTGGCTTGAAAG...GTCTCTGCCCCGCCCTCCACCACCGTTAGCCAATCCCTGAACAGTCCCGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR-3UTR CCA 90 bp | TCACTAAGCCCCATTAACTCCGGAGAGAGGGACCTGAGAGTCCTTGTCCTCAGAGAAGGGAGGGACAGGTaGGCAGGAGGGATGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: SLSPINSGERDLRVLVLREGRDR*AGGMLA Trigger: AGCAAGCATCCCTCCTGCCCACCTGTCCCTCCCTTC...TCTGAGGACAAGGACTCTCAGGTCCCTCTCTCCGGAGTTAATGGGGCTTAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGACGGGACTGTTCAGGGATTGGCTAACGGTGGTGGAGGGCGGGGCAGAGACCTATCTGCCCATCAATaGACAAGCAAGTTGGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: EDGTVQGLANGGGGRGRDLSAHQ*TSKLEA Trigger: AGCTTCCAACTTGCTTGTGCATTGATGGGCAGATAG...GTCTCTGCCCCGCCCTCCACCACCGTTAGCCAATCCCTGAACAGTCCCGTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGACCCCTTGGGAGCAAGATCAAATGGGAGAGCTTGGGTTTGAACATTGTTTCAGGGTTGGACCTGTGTaGGCCGGGTGGCAAGGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: ETPWEQDQMGELGFEHCFRVGPV*AGWQGW Trigger: CCACCCTTGCCACCCGGCCCACACAGGTCCAACCCT...GAAACAATGTTCAAACCCAAGCTCTCCCATTTGATCTTGCTCCCAAGGGGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CAA 90 bp | TTCCTCATTTTTGCCACTAGAGGTCAGGAGGTCACTGACTCTGGGTaGGAAGACGGGACTGTTCAGGGATTGGCTAACGGTGGTGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: FLIFATRGQEVTDSG*EDGTVQGLANGGGG Trigger: CCCTCCACCACCGTTAGCCAATCCCTGAACAGTCCCGTCTTCCAACCCAGAGTCAGTGACCTCCTGACCTCTAGTGGCAAAAATGAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGGCTTGGAGTTTTTGCTTCAGCCCTTCACACCGTGGTGGCCCTGGAAGTTCTTGGATCTTGCCCTTaGCGGCAGCTGAGAAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: KRLGVFASALHTVVALEVLGSCP*RQLRKP Trigger: GGGCTTTCTCAGCTGCCGCCAAGGGCAAGATCCAAG...AACTTCCAGGGCCACCACGGTGTGAAGGGCTGAAGCAAAAACTCCAAGCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACAAGGCTTTCTATTTTCCACTGCTGGTCCTGACTGTCTTGATAGGGCCAGGGGATTCCCCCAGCTCTaGCCAGCTTGGATGCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: KQGFLFSTAGPDCLDRARGFPQL*PAWMPR Trigger: CCTGGGCATCCAAGCTGGCCAGAGCTGGGGGAATCC...CCTGGCCCTATCAAGACAGTCAGGACCAGCAGTGGAAAATAGAAAGCCTTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGAGCCATCTCATTTATAAAATGGGTTGACCATGCCTCCCACCACACAGGAAGAGTTCTCAGCTCCTaGGGGCAGAACCCCCATCCC | + |
|
Preference number: 2 (lower is better) Translates to: SGAISFIKWVDHASHHTGRVLSS*GQNPHP Trigger: GGGATGGGGGTTCTGCCCTCAGGAGCTGAGAACTCT...TCCTGTGTGGTGGGAGGCATGGTCAACCCATTTTATAAATGAGATGGCTCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCCACCACACAGGATGGTGAAGATTCAATAAGAAGGCGTTTGCCAATTCAGCAGCTCTGGCCAGCTTaGATGCCCAGGGAGCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PPTTQDGEDSIRRRLPIQQLWPA*MPRELE Trigger: TTCCAGCTCCCTGGGCATCCAAGCTGGCCAGAGCTG...CTGAATTGGCAAACGCCTTCTTATTGAATCTTCACCATCCTGTGTGGTGGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCCCAAACAAGGCTTTCTATTTTCCACTGCTGGTCCTGACTGTCTTGATAGGGAGGAGCAGTGTGCATTaGGACCCCTTGGGAGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: PPNKAFYFPLLVLTVLIGRSSVH*DPLGAR Trigger: TCTTGCTCCCAAGGGGTCTCAATGCACACTGCTCCT...CCCTATCAAGACAGTCAGGACCAGCAGTGGAAAATAGAAAGCCTTGTTTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGAGCCATCTCATTTATAAAATGGGTTGACCATGCCTCCCACCACACAGGAGAGTACCCCCATTTCTaGGCTTGCAGCAGGGCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: SGAISFIKWVDHASHHTGEYPHF*ACSRAP Trigger: TGGAGCCCTGCTGCAAGCCCAGAAATGGGGGTACTC...TCCTGTGTGGTGGGAGGCATGGTCAACCCATTTTATAAATGAGATGGCTCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCCACCACACAGGATGGTGAAGATTCAATAAGAAGGCGTTTGCCAATTCAGCTCCTGAATCCCAGTTaGCAGGAGGCAGTTGGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PPTTQDGEDSIRRRLPIQLLNPS*QEAVGS Trigger: GCTCCCAACTGCCTCCTGCCAACTGGGATTCAGGAG...CTGAATTGGCAAACGCCTTCTTATTGAATCTTCACCATCCTGTGTGGTGGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGACGGGACTGTTCAGGGATTGGCTAACGGTGGTGGAGGGCGGGGCAGAGACAGAGATGTAATGTACTaGGGATTTAGAAACGTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: EDGTVQGLANGGGGRGRDRDVMY*GFRNVP Trigger: TGGAACGTTTCTAAATCCCCAGTACATTACATCTCT...GTCTCTGCCCCGCCCTCCACCACCGTTAGCCAATCCCTGAACAGTCCCGTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACAAGGCTTTCTATTTTCCACTGCTGGTCCTGACTGTCTTGATAGGGCCAGGATGGGATGCCTTCCTTaGCCTCCACCCTTCAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: KQGFLFSTAGPDCLDRARMGCLP*PPPFSS Trigger: ACTGCTGAAGGGTGGAGGGCAAGGAAGGCATCCCAT...CCTGGCCCTATCAAGACAGTCAGGACCAGCAGTGGAAAATAGAAAGCCTTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGAGCCATCTCATTTATAAAATGGGTTGACCATGCCTCCCACCACACAGGACTACATTGTCTGTCCTaGAGTCCTGGGCTCTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SGAISFIKWVDHASHHTGLHCLS*SPGLCL Trigger: CAGGCAGAGCCCAGGACTCCAGGACAGACAATGTAG...TCCTGTGTGGTGGGAGGCATGGTCAACCCATTTTATAAATGAGATGGCTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCCAAACAAGGCTTTCTATTTTCCACTGCTGGTCCTGACTGTCTTGATAGGGGTTGGAAGCTCTGGCTaGCTACATTGTCTGTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PPNKAFYFPLLVLTVLIGVGSSG*LHCLSW Trigger: CCAGGACAGACAATGTAGCCAGCCAGAGCTTCCAAC...CCCTATCAAGACAGTCAGGACCAGCAGTGGAAAATAGAAAGCCTTGTTTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CAA 90 bp | ACCTATTTTCCCTGCCAACTAGGGAAGGCTGGTGAGCACTGTGGATaGGAATCATGTTCTGGGACCCCGAGTTCTTATTTCAGCTGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: TYFPCQLGKAGEHCG*ESCSGTPSSYFSCR Trigger: CCTACAGCTGAAATAAGAACTCGGGGTCCCAGAACATGATTCCAATCCACAGTGCTCACCAGCCTTCCCTAGTTGGCAGGGAAAATAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGGCTTGGAGTTTTTGCTTCAGCCCTTCACACCGTGGTGGCCCTGGAAGTTCTCACGGAGTCTATCTaGCCATCAATGCACAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: KRLGVFASALHTVVALEVLTESI*PSMHKQ Trigger: TTGCTTGTGCATTGATGGGCAGATAGACTCCGTGAG...AACTTCCAGGGCCACCACGGTGTGAAGGGCTGAAGCAAAAACTCCAAGCCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCCAAACAAGGCTTTCTATTTTCCACTGCTGGTCCTGACTGTCTTGATAGGGACAACTGGCTGGTTCTaGTATGCTGCACCCCTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: PPNKAFYFPLLVLTVLIGTTGWF*YAAPLC Trigger: ACAAAGGGGTGCAGCATACCAGAACCAGCCAGTTGT...CCCTATCAAGACAGTCAGGACCAGCAGTGGAAAATAGAAAGCCTTGTTTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTGTTTTTGGTATCAAATTTCCTCTTTGCAACGCTGATGAGCCAGAAGGAATCTGGCCAGCTTGGATaGCCAGGGAGCTGGAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: PLFLVSNFLFATLMSQKESGQLG*PGSWNR Trigger: CCTGTTCCAGCTCCCTGGGCATCCAAGCTGGCCAGA...TTCCTTCTGGCTCATCAGCGTTGCAAAGAGGAAATTTGATACCAAAAACAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTTTGTTTTTGGTATCAAATTTCCTCTTTGCAACGCTGATGAGCCAGAAGGAAAACACCAGCTTGAGCTaGGGGGATGAAGAAGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: PLFLVSNFLFATLMSQKENTSLS*GDEEGR Trigger: CCTCCCTTCTTCATCCCCTCAGCTCAAGCTGGTGTT...TTCCTTCTGGCTCATCAGCGTTGCAAAGAGGAAATTTGATACCAAAAACAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTGTTTTTGGTATCAAATTTCCTCTTTGCAACGCTGATGAGCCAGAAGGAATCCGAGCAGACAACTTaGATCTTGCCCTTGGCGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PLFLVSNFLFATLMSQKESEQTT*ILPLAA Trigger: TGCCGCCAAGGGCAAGATCCAAGTTGTCTGCTCGGA...TTCCTTCTGGCTCATCAGCGTTGCAAAGAGGAAATTTGATACCAAAAACAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAATGACCTTTGTTTTTGGTATCAAATTTCCTCTTTGCAACGCTGATGAGCCAGGCAAGGATCATCATTaGGTCCCAAACCCACTTACT | + |
|
Preference number: 2 (lower is better) Translates to: GMTFVFGIKFPLCNADEPGKDHH*VPNPLT Trigger: AGTAAGTGGGTTTGGGACTCAATGATGATCCTTGCC...TGGCTCATCAGCGTTGCAAAGAGGAAATTTGATACCAAAAACAAAGGTCATTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | TTCACTTGGCTGGAGAAGGACGGAGGGCAGGACGCTTaGCCCGAGCTCGGCGGGCGGGCGGGCGGGCGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: FTWLEKDGGQDA*PELGGRAGGRA Trigger: CGCCCGCCCGCCCGCCCGCCCGCCGAGCTCGGGCCAAGCGTCCTGCCCTCCGTCCTTCTCCAGCCAAGTGAA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR GCA 72 bp | CGGCGGGCGGGCGGGCGGGCGGGCGGGCCACGGAGGTaGAGTTCCTCATTTTTGCCACTAGAGGTCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RRAGGRAGGPRR*SSSFLPLEVRR Trigger: CCTCCTGACCTCTAGTGGCAAAAATGAGGAACTGCACCTCCGTGGCCCGCCCGCCCGCCCGCCCGCCCGCCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | TGGCGGCAGCTGAGAAAGCCCAGGGTTGGACCTGTGTaGGCCGGGTGGCAAGGGTGGGTGGCAGCAGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: WRQLRKPRVGPV*AGWQGWVAADG Trigger: CCCATCTGCTGCCACCCACCCTTGCCACCCGGCCCACACAGGTCCAACCCTGGGCTTTCTCAGCTGCCGCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | CTGACTCTGGGTTGGAAGACGGGACTGTTCAGGGATTaGCTAACGGTGGTGGAGGGCGGGGCAGAGACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LTLGWKTGLFRD*LTVVEGGAETR Trigger: CCTGGTCTCTGCCCCGCCCTCCACCACCGTTAGCCAATCCCTGAACAGTCCCGTCTTCCAACCCAGAGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR GCA 72 bp | CTCCACCCTTCAGCAGTCAGCAGTACCCACAGCCCCTaGAGACAACTGGCTGGTTCTGGTATGCTGCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: LHPSAVSSTHSP*RQLAGSGMLHP Trigger: GGGGTGCAGCATACCAGAACCAGCCAGTTGTCTGCAGGGGCTGTGGGTACTGCTGACTGCTGAAGGGTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR GCA 72 bp | ATCCCTAAGCCTAGCTCCTGCCTAAAAGCCCAATGCTaGCCTAGCGCAACCCTAGGCCCCCATGGCTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: IPKPSSCLKAQC*PSATLGPHGSL Trigger: CAGGGAGCCATGGGGGCCTAGGGTTGCGCTAGGGCAGCATTGGGCTTTTAGGCAGGAGCTAGGCTTAGGGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR GCA 72 bp | CACATCCCTAAGCCTAGCTCCTGCCTAAAAGCCCAATaGTGCCCTAGCGCAACCCTAGGCCCCCATGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HIPKPSSCLKAQ*CPSATLGPHGS Trigger: GGAGCCATGGGGGCCTAGGGTTGCGCTAGGGCAGCATTGGGCTTTTAGGCAGGAGCTAGGCTTAGGGATGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | TGTTTTCCTGTCCCTCTGAGGGAGGCTGGGTGCTCTTaGCCTCCTAGCAGGGGCTGCACTGTCTATGTCCGA | + |
|
Preference number: 3 (lower is better) Translates to: CFPVPLREAGCS*PPSRGCTVYVR Trigger: TCGGACATAGACAGTGCAGCCCCTGCTAGGAGGCCAAGAGCACCCAGCCTCCCTCAGAGGGACAGGAAAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR TCA 72 bp | GTGGAACTCCTTGGTTCCCTGTTCCCCCTGTGCTCCTaGATCCCAGTTGGCAGGAGGCAGTTGGGAGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VELLGSLFPLCS*IPVGRRQLGAS Trigger: TGAAGCTCCCAACTGCCTCCTGCCAACTGGGATTCAGGAGCACAGGGGGAACAGGGAACCAAGGAGTTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | TGGTTCCCTGTTCCCCCTGTGCTCCTGAATCCCAGTTaGCAGGAGGCAGTTGGGAGCTTCAAGACTGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: WFPVPPVLLNPS*QEAVGSFKTDQ Trigger: CTGGTCAGTCTTGAAGCTCCCAACTGCCTCCTGCCAACTGGGATTCAGGAGCACAGGGGGAACAGGGAACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR TCA 72 bp | AAGCCACAGCTGGGTTTTCAAGACTGTGCTGAGCCCTaGCTCTCATGGGATGCCTTCCTTGCCCTCCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: KPQLGFQDCAEP*LSWDAFLALHP Trigger: AGGGTGGAGGGCAAGGAAGGCATCCCATGAGAGTCAGGGCTCAGCACAGTCTTGAAAACCCAGCTGTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR GCA 72 bp | CTGCACTGTCTATGTCCGAGCAGACAACTTGGATCTTaGCCTTGGCGGCAGCTGAGAAAGCCCAGGGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LHCLCPSRQLGS*PWRQLRKPRVG Trigger: TCCAACCCTGGGCTTTCTCAGCTGCCGCCAAGGGCAAGATCCAAGTTGTCTGCTCGGACATAGACAGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR GCA 72 bp | ATGTTGTGTTTTCCTGTCCCTCTGAGGGAGGCTGGGTaGTCTTGGCCTCCTAGCAGGGGCTGCACTGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: MLCFPVPLREAG*SWPPSRGCTVY Trigger: ATAGACAGTGCAGCCCCTGCTAGGAGGCCAAGAGCACCCAGCCTCCCTCAGAGGGACAGGAAAACACAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR GCA 72 bp | GAGGCTGAGGATTCCCCCAGCTCTGGCCAGCTTGGATaGCCAGGGAGCTGGAACAGGTATCATGTTGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: EAEDSPSSGQLG*PGSWNRYHVVF Trigger: AAACACAACATGATACCTGTTCCAGCTCCCTGGGCATCCAAGCTGGCCAGAGCTGGGGGAATCCTCAGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR GCA 72 bp | ATGCTGCACCCCTTTGTAGCAATATGTGCACCCAGATaGCCTGCTAGAGTGGGAATCCCCGTCCCAGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: MLHPFVAICAPR*PARVGIPVPEA Trigger: AGCCTCTGGGACGGGGATTCCCACTCTAGCAGGGCATCTGGGTGCACATATTGCTACAAAGGGGTGCAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | TGTCTATGTCCGAGCAGACAACTTGGATCTTGCCCTTaGCGGCAGCTGAGAAAGCCCAGGGTTGGACCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CLCPSRQLGSCP*RQLRKPRVGPV Trigger: CACAGGTCCAACCCTGGGCTTTCTCAGCTGCCGCCAAGGGCAAGATCCAAGTTGTCTGCTCGGACATAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | TCCCCCAGCTCTGGCCAGCTTGGATGCCCAGGGAGCTaGAACAGGTATCATGTTGTGTTTTCCTGTCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SPSSGQLGCPGS*NRYHVVFSCPS Trigger: AGAGGGACAGGAAAACACAACATGATACCTGTTCCAGCTCCCTGGGCATCCAAGCTGGCCAGAGCTGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGACCCCTTGGGAGCAAGATCAAATGGGAGAGCTTGGGTTTGAACATTGTTTCCCAGCTCTGGCCAGCTaGGATGCCCAGGGAGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ETPWEQDQMGELGFEHCFPALAS*DAQGAG Trigger: TCCAGCTCCCTGGGCATCCAAGCTGGCCAGAGCTGG...GAAACAATGTTCAAACCCAAGCTCTCCCATTTGATCTTGCTCCCAAGGGGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | TGCCCATCAATGCACAAGCAAGTTGGAAGCTCTGGCTaGCTACATTGTCTGTCCTGGAGTCCTGGGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CPSMHKQVGSSG*LHCLSWSPGLC Trigger: GCAGAGCCCAGGACTCCAGGACAGACAATGTAGCCAGCCAGAGCTTCCAACTTGCTTGTGCATTGATGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGCCCTGACTCTCATGGGATGCCTTCCTTGCCCTCCACCCTTCAGCAGTCAGGAACAGGTATCATGTaGTGTTTTCCTGTCCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSPDSHGMPSLPSTLQQSGTGIM*CFPVPL Trigger: CAGAGGGACAGGAAAACACAACATGATACCTGTTCC...TGACTGCTGAAGGGTGGAGGGCAAGGAAGGCATCCCATGAGAGTCAGGGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACTAAGCCCCATTAACTCCGGAGAGAGGGACCTGAGAGTCCTTGTCCTCAGACAAGCAACAGGTGGCTaGGTGCTGTGGAGAGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLSPINSGERDLRVLVLRQATGG*VLWRAR Trigger: TCTAGCTCTCCACAGCACCAAGCCACCTGTTGCTTG...TCTGAGGACAAGGACTCTCAGGTCCCTCTCTCCGGAGTTAATGGGGCTTAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR TCA 72 bp | TCAAGACTGACCAGTGTCCTACCCTTTCCTAGAAACTaGGGCCAGAGTTCTCAGCTCCTGAGGGCAGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: SRLTSVLPFPRN*GQSSQLLRAEP Trigger: GGGTTCTGCCCTCAGGAGCTGAGAACTCTGGCCTCAGTTTCTAGGAAAGGGTAGGACACTGGTCAGTCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR GCA 72 bp | CGTCCCAGAGGCTCACGGAGTCTATCTGCCCATCAATaGACAAGCAAGTTGGAAGCTCTGGCTGGCTACATT | + |
|
Preference number: 3 (lower is better) Translates to: RPRGSRSLSAHQ*TSKLEALAGYI Trigger: AATGTAGCCAGCCAGAGCTTCCAACTTGCTTGTGCATTGATGGGCAGATAGACTCCGTGAGCCTCTGGGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR GCA 72 bp | GCTTGGTGCTGTGGAGAGCTAGAGACCTATTTTCCCTaGCAACTAGGGAAGGCTGGTGAGCACTGTGGATTG | + |
|
Preference number: 3 (lower is better) Translates to: AWCCGELETYFP*QLGKAGEHCGL Trigger: CAATCCACAGTGCTCACCAGCCTTCCCTAGTTGGCAGGGAAAATAGGTCTCTAGCTCTCCACAGCACCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCACCACACAGGATGGTGAAGATTCAATAAGAAGGCGTTTGCCAATTCAGCATGGGATGCCTTCCTaGCCCTCCACCCTTCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PPTTQDGEDSIRRRLPIQHGMPS*PSTLQQ Trigger: CTGCTGAAGGGTGGAGGGCAAGGAAGGCATCCCATG...CTGAATTGGCAAACGCCTTCTTATTGAATCTTCACCATCCTGTGTGGTGGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | TATCTGCCCATCAATGCACAAGCAAGTTGGAAGCTCTaGCTGGCTACATTGTCTGTCCTGGAGTCCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: YLPINAQASWKL*LATLSVLESWA Trigger: AGCCCAGGACTCCAGGACAGACAATGTAGCCAGCCAGAGCTTCCAACTTGCTTGTGCATTGATGGGCAGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | GAGGGAAACCCAGTCTCTTACAAGCAACAGGTGGCTTaGTGCTGTGGAGAGCTAGAGACCTATTTTCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EGNPVSYKQQVA*CCGELETYFPC Trigger: GCAGGGAAAATAGGTCTCTAGCTCTCCACAGCACCAAGCCACCTGTTGCTTGTAAGAGACTGGGTTTCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | GGCTTGGAGTTTTTGCTTCAGCCCTTCACACCGTGGTaGCCCTGGAAGTTTATCAACAACTCTGGAGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: GLEFLLQPFTPW*PWKFINNSGAI Trigger: GATGGCTCCAGAGTTGTTGATAAACTTCCAGGGCCACCACGGTGTGAAGGGCTGAAGCAAAAACTCCAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGAGCCATCTCATTTATAAAATGGGTTGACCATGCCTCCCACCACACAGGACAGGAGCAGTGTGCATaGAGACCCCTTGGGAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SGAISFIKWVDHASHHTGQEQCA*RPLGSK Trigger: CTTGCTCCCAAGGGGTCTCAATGCACACTGCTCCTG...TCCTGTGTGGTGGGAGGCATGGTCAACCCATTTTATAAATGAGATGGCTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGGCTTGGAGTTTTTGCTTCAGCCCTTCACACCGTGGTGGCCCTGGAAGTTGGGCAGGAGGGATGCTaGCTTCTTTCCACATTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: KRLGVFASALHTVVALEVGQEGC*LLSTLV Trigger: TACTAATGTGGAAAGAAGCAAGCATCCCTCCTGCCC...AACTTCCAGGGCCACCACGGTGTGAAGGGCTGAAGCAAAAACTCCAAGCCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR TCA 72 bp | CTGGGAATTTACGCTGAGAACAGGAGCAGTGTGCATTaGGACCCCTTGGGAGCAAGATCAAATGGGAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGIYAENRSSVH*DPLGARSNGRA Trigger: AGCTCTCCCATTTGATCTTGCTCCCAAGGGGTCTCAATGCACACTGCTCCTGTTCTCAGCGTAAATTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR GCA 72 bp | GGAAACCCAGTCTCTTACAAGCAACAGGTGGCTTGGTaGTGTGGAGAGCTAGAGACCTATTTTCCCTGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GNPVSYKQQVAW*CGELETYFPCQ Trigger: TTGGCAGGGAAAATAGGTCTCTAGCTCTCCACAGCACCAAGCCACCTGTTGCTTGTAAGAGACTGGGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | AAAGGCTTGGAGTTTTTGCTTCAGCCCTTCACACCGTaGTGGCCCTGGAAGTTTATCAACAACTCTGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: KGLEFLLQPFTP*WPWKFINNSGA Trigger: GGCTCCAGAGTTGTTGATAAACTTCCAGGGCCACCACGGTGTGAAGGGCTGAAGCAAAAACTCCAAGCCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGACCCCTTGGGAGCAAGATCAAATGGGAGAGCTTGGGTTTGAACATTGTTTCCAATGCACAAGCAAGTaGGAAGCTCTGGCTGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: ETPWEQDQMGELGFEHCFQCTSK*EALAGY Trigger: GTAGCCAGCCAGAGCTTCCAACTTGCTTGTGCATTG...GAAACAATGTTCAAACCCAAGCTCTCCCATTTGATCTTGCTCCCAAGGGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGGCTTGGAGTTTTTGCTTCAGCCCTTCACACCGTGGTGGCCCTGGAAGTTTGGGAGAGCTTGGGTTaGAACATTGTTTCCCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: KRLGVFASALHTVVALEVWESLG*NIVSQV Trigger: CACTTGGGAAACAATGTTCAAACCCAAGCTCTCCCA...AACTTCCAGGGCCACCACGGTGTGAAGGGCTGAAGCAAAAACTCCAAGCCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | GGTGCACTTAAATATCTGCTCCTGTTTCTAGCTGTATaGGGAAAACATCAGGCCGGTCCCCCAAGTTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GALKYLLLFLAV*GKHQAGPPSSL Trigger: CAAGGAACTTGGGGGACCGGCCTGATGTTTTCCCCATACAGCTAGAAACAGGAGCAGATATTTAAGTGCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR TCA 72 bp | TTATCACTCAGTGATGGATTGAGGAAAATGGGGCTCTaGGATGATGGTGGAACTCCTTGGTTCCCTGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LSLSDGLRKMGL*DDGGTPWFPVP Trigger: GGGAACAGGGAACCAAGGAGTTCCACCATCATCTCAGAGCCCCATTTTCCTCAATCCATCACTGAGTGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | CAGTGTGCATTGAGACCCCTTGGGAGCAAGATCAAATaGGAGAGCTTGGGTTTGAACATTGTTTCCCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QCALRPLGSKIK*ESLGLNIVSQV Trigger: CACTTGGGAAACAATGTTCAAACCCAAGCTCTCCCATTTGATCTTGCTCCCAAGGGGTCTCAATGCACACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | GAGTTTTTGCTTCAGCCCTTCACACCGTGGTGGCCCTaGAAGTTTATCAACAACTCTGGAGCCATCTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: EFLLQPFTPWWP*KFINNSGAISF Trigger: AAATGAGATGGCTCCAGAGTTGTTGATAAACTTCCAGGGCCACCACGGTGTGAAGGGCTGAAGCAAAAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCCACCACACAGGATGGTGAAGATTCAATAAGAAGGCGTTTGCCAATTCAGTTGTTTCCCAAGTGCTaGTACACATCCCTAAGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: PPTTQDGEDSIRRRLPIQLFPKC*YTSLSL Trigger: TAGGCTTAGGGATGTGTACAAGCACTTGGGAAACAA...CTGAATTGGCAAACGCCTTCTTATTGAATCTTCACCATCCTGTGTGGTGGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR TCA 72 bp | CCCTTGGGAGCAAGATCAAATGGGAGAGCTTGGGTTTaGACATTGTTTCCCAAGTGCTTGTACACATCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: PLGARSNGRAWV*TLFPKCLYTSL Trigger: TAGGGATGTGTACAAGCACTTGGGAAACAATGTTCAAACCCAAGCTCTCCCATTTGATCTTGCTCCCAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | TTAGTAGGATCCCTTTCTCATTCCCCTGAAGCTGACTaGGAATTTACGCTGAGAACAGGAGCAGTGTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: LVGSLSHSPEAD*EFTLRTGAVCI Trigger: AATGCACACTGCTCCTGTTCTCAGCGTAAATTCCCAGTCAGCTTCAGGGGAATGAGAAAGGGATCCTACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGAGCCATCTCATTTATAAAATGGGTTGACCATGCCTCCCACCACACAGGAATCAAATGGGAGAGCTaGGGTTTGAACATTGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SGAISFIKWVDHASHHTGIKWES*GLNIVS Trigger: GGAAACAATGTTCAAACCCAAGCTCTCCCATTTGAT...TCCTGTGTGGTGGGAGGCATGGTCAACCCATTTTATAAATGAGATGGCTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR TCA 72 bp | AAATGGGTTGACCATGCCTCCCACCACACAGGATGGTaGAGATTCAATAAGAAGGCGTTTGCCAATTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: KWVDHASHHTGW*RFNKKAFANSV Trigger: TACTGAATTGGCAAACGCCTTCTTATTGAATCTTCACCATCCTGTGTGGTGGGAGGCATGGTCAACCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR TCA 72 bp | AGGTGGATGATGGGCATCAAGAGAGGCCCTGGTTACTaGCAGTACTTTGGAATGACCTTTGTTTTTGGTATC | + |
|
Preference number: 3 (lower is better) Translates to: RWMMGIKRGPGY*QYFGMTFVFGI Trigger: GATACCAAAAACAAAGGTCATTCCAAAGTACTGTCAGTAACCAGGGCCTCTCTTGATGCCCATCATCCACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR GCA 72 bp | AGGTCAGACAAGATTACAAAAATTGTTTCGTGGCGCTaGAGTTTGAGGATGTATTCTGCAGTCGTCACGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RSDKITKIVSWR*SLRMYSAVVTW Trigger: CCACGTGACGACTGCAGAATACATCCTCAAACTGCAGCGCCACGAAACAATTTTTGTAATCTTGTCTGACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR TCA 72 bp | ACAAGATTACAAAAATTGTTTCGTGGCGCTGCAGTTTaGGGATGTATTCTGCAGTCGTCACGTGGCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TRLQKLFRGAAV*GCILQSSRGSK Trigger: TTTGCTGCCACGTGACGACTGCAGAATACATCCTCAAACTGCAGCGCCACGAAACAATTTTTGTAATCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR TCA 72 bp | ACGCTGATGAGCCAGAAGGAAGATACTCGTTTGGAATaGAAGACTGAACTGATTCTGAAACTTCTCAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TLMSQKEDTRLE*KTELILKLLKG Trigger: TCCTTTGAGAAGTTTCAGAATCAGTTCAGTCTTTCATTCCAAACGAGTATCTTCCTTCTGGCTCATCAGCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CCA 72 bp | AAAGGACCTTTTCCCTTTAGTAGAGATGTAATGTACTaGGGATTTAGAAACGTTCCAGGATCCGGGAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KGPFPFSRDVMY*GFRNVPGSGKV Trigger: AACTTTCCCGGATCCTGGAACGTTTCTAAATCCCCAGTACATTACATCTCTACTAAAGGGAAAAGGTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR GCA 72 bp | GGAATGACCTTTGTTTTTGGTATCAAATTTCCTCTTTaGAACGCTGATGAGCCAGAAGGAAGATACTCGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GMTFVFGIKFPL*NADEPEGRYSF Trigger: AAACGAGTATCTTCCTTCTGGCTCATCAGCGTTGCAAAGAGGAAATTTGATACCAAAAACAAAGGTCATTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CAA 72 bp | ATTCACTTGGCTGGAGAAGGACGGAGGGCAGGACGCTaGGCCCGAGCTCGGCGGGCGGGCGGGCGGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IHLAGEGRRAGR*ARARRAGGRAG Trigger: GCCCGCCCGCCCGCCCGCCCGCCGAGCTCGGGCCAAGCGTCCTGCCCTCCGTCCTTCTCCAGCCAAGTGAAT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CAA 72 bp | CGGGCGGGCGGGCCACGGAGGTGCAGTTCCTCATTTTaGCCACTAGAGGTCAGGAGGTCACTGACTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RAGGPRRCSSSF*PLEVRRSLTLG Trigger: ACCCAGAGTCAGTGACCTCCTGACCTCTAGTGGCAAAAATGAGGAACTGCACCTCCGTGGCCCGCCCGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| CDS-3UTR TCA 90 bp | GGATCTTGCCCTTGGCGGCAGCTGAGAAAGCCCAGGGTTGGACCTGTGTGGGCCCAGGCCCTGCTTCTGTaGGCTGTACTTGAGGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSCPWRQLRKPRVGPVWAQALLL*AVLEGD Trigger: ATCTCCCTCAAGTACAGCTCACAGAAGCAGGGCCTG...GGCCCACACAGGTCCAACCCTGGGCTTTCTCAGCTGCCGCCAAGGGCAAGATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTGAGGCTGAGGATTCCCCCAGCTCTGGCCAGCTTGGATGCCCAGGGAGCTAAGCAGTCAAACCAGTaGTTCAGGCGCTCGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELRLRIPPALASLDAQGAKQSNQ*FRRSPL Trigger: CAAGGGCGAGCGCCTGAAGCACTGGTTTGACTGCTT...AGCTCCCTGGGCATCCAAGCTGGCCAGAGCTGGGGGAATCCTCAGCCTCAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CAA 72 bp | ACTGACTCTGGGTTGGAAGACGGGACTGTTCAGGGATaGGCTAACGGTGGTGGAGGGCGGGGCAGAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TDSGLEDGTVQG*ANGGGGRGRDQ Trigger: CTGGTCTCTGCCCCGCCCTCCACCACCGTTAGCCAATCCCTGAACAGTCCCGTCTTCCAACCCAGAGTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CAA 72 bp | GAGCTGAGGCTGAGGATTCCCCCAGCTCTGGCCAGCTaGGATGCCCAGGGAGCTGGAACAGGTATCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ELRLRIPPALAS*DAQGAGTGIML Trigger: CAACATGATACCTGTTCCAGCTCCCTGGGCATCCAAGCTGGCCAGAGCTGGGGGAATCCTCAGCCTCAGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGCCCTGACTCTCATGGGATGCCTTCCTTGCCCTCCACCCTTCAGCAGTCATTGTCCACCGGCAGCTaGTTCTCCAGGCAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSPDSHGMPSLPSTLQQSLSTGS*FSRQML Trigger: CAGCATCTGCCTGGAGAAGCAGCTGCCGGTGGACAA...TGACTGCTGAAGGGTGGAGGGCAAGGAAGGCATCCCATGAGAGTCAGGGCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGAACAGGAGCAGTGTGCATTGAGACCCCTTGGGAGCAAGATCAAATGGGAGGCGGTGCAGTCGTCTaGCTCGTAGCCGTCGACGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRTGAVCIETPWEQDQMGGGAVV*LVAVDV Trigger: GACGTCGACGGCTACGAGTCAGACGACTGCACCGCC...TCCCATTTGATCTTGCTCCCAAGGGGTCTCAATGCACACTGCTCCTGTTCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| CDS-3UTR TCA 90 bp | GAAGACGGGACTGTTCAGGGATTGGCTAACGGTGGTGGAGGGCGGGGCAGAGACTCTCCAGGCAGATGCTaGATGTCTTGGTGTGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: EDGTVQGLANGGGGRGRDSPGRC*MSWCDW Trigger: CCAATCACACCAAGACATTCAGCATCTGCCTGGAGA...GTCTCTGCCCCGCCCTCCACCACCGTTAGCCAATCCCTGAACAGTCCCGTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CAA 72 bp | GCTGCACTGTCTATGTCCGAGCAGACAACTTGGATCTaGCCCTTGGCGGCAGCTGAGAAAGCCCAGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AALSMSEQTTWI*PLAAAEKAQGW Trigger: CCAACCCTGGGCTTTCTCAGCTGCCGCCAAGGGCAAGATCCAAGTTGTCTGCTCGGACATAGACAGTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CAA 72 bp | ACTGTGCTGAGCCCTGACTCTCATGGGATGCCTTCCTaGCCCTCCACCCTTCAGCAGTCAGCAGTACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TVLSPDSHGMPS*PSTLQQSAVPT Trigger: TGTGGGTACTGCTGACTGCTGAAGGGTGGAGGGCAAGGAAGGCATCCCATGAGAGTCAGGGCTCAGCACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGAACAGGAGCAGTGTGCATTGAGACCCCTTGGGAGCAAGATCAAATGGGAGGCCCTTGGCCTTGCTaGTGGTGCAGTGCAGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LRTGAVCIETPWEQDQMGGPWPC*WCSAVR Trigger: ACGCACTGCACTGCACCATCAGCAAGGCCAAGGGCC...TCCCATTTGATCTTGCTCCCAAGGGGTCTCAATGCACACTGCTCCTGTTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CAA 72 bp | CTGTCTATGTCCGAGCAGACAACTTGGATCTTGCCCTaGGCGGCAGCTGAGAAAGCCCAGGGTTGGACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSMSEQTTWILP*AAAEKAQGWTC Trigger: ACAGGTCCAACCCTGGGCTTTCTCAGCTGCCGCCAAGGGCAAGATCCAAGTTGTCTGCTCGGACATAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CAA 72 bp | AGCTTGGATGCCCAGGGAGCTGGAACAGGTATCATGTaGTGTTTTCCTGTCCCTCTGAGGGAGGCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLDAQGAGTGIM*CFPVPLREAGC Trigger: GCACCCAGCCTCCCTCAGAGGGACAGGAAAACACAACATGATACCTGTTCCAGCTCCCTGGGCATCCAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGGAGGCAGTTGGGAGCTTCAAGACTGACCAGTGTCCTACCCTTTCCTAGAGCAGCAGGTGTAGTTTaGCGTAGGGATCAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRRQLGASRLTSVLPFPRAAGVV*RRDQPV Trigger: GACTGGCTGATCCCTACGTCAAACTACACCTGCTGC...TCTAGGAAAGGGTAGGACACTGGTCAGTCTTGAAGCTCCCAACTGCCTCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCCACCACACAGGATGGTGAAGATTCAATAAGAAGGCGTTTGCCAATTCAGGTGCACAGCGCACGATaGCCACCAGCAGGCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPTTQDGEDSIRRRLPIQVHSAR*PPAGPA Trigger: AGCAGGGCCTGCTGGTGGGCATCGTGCGCTGTGCAC...CTGAATTGGCAAACGCCTTCTTATTGAATCTTCACCATCCTGTGTGGTGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CAA 72 bp | CACCCTGCCTGTCCCTGGGATTGGCAAGGATCATCATaGAGTCCCAAACCCACTTACTGCCTGGTGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: HPACPWDWQGSS*SPKPTYCLVQQ Trigger: CTGTTGCACCAGGCAGTAAGTGGGTTTGGGACTCAATGATGATCCTTGCCAATCCCAGGGACAGGCAGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCCACCACACAGGATGGTGAAGATTCAATAAGAAGGCGTTTGCCAATTCAGGCTCGCCCTTGGCGTTaGTGCCCAGAACCACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPTTQDGEDSIRRRLPIQARPWR*CPEPHH Trigger: GTGGTGTGGTTCTGGGCATCAACGCCAAGGGCGAGC...CTGAATTGGCAAACGCCTTCTTATTGAATCTTCACCATCCTGTGTGGTGGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGGCTTGGAGTTTTTGCTTCAGCCCTTCACACCGTGGTGGCCCTGGAAGTTCTGGGAGCTCATTGGTaGGCGTGTGCCAACGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KRLGVFASALHTVVALEVLGAHW*ACANAQ Trigger: TTGAGCGTTGGCACACGCTCACCAATGAGCTCCCAG...AACTTCCAGGGCCACCACGGTGTGAAGGGCTGAAGCAAAAACTCCAAGCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CAA 72 bp | CCCTGCCAACTAGGGAAGGCTGGTGAGCACTGTGGATaGGAATCATGTTCTGGGACCCCGAGTTCTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PCQLGKAGEHCG*ESCSGTPSSYF Trigger: GAAATAAGAACTCGGGGTCCCAGAACATGATTCCAATCCACAGTGCTCACCAGCCTTCCCTAGTTGGCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| CDS-3UTR TCA 90 bp | AGGTATCATGTTGTGTTTTCCTGTCCCTCTGAGGGAGGCTGGGTGCTCTTGGCCCCAGGTCTCCATGCTTaGTCTCGTAACAGAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RYHVVFSCPSEGGWVLLAPGLHA*SRNRIP Trigger: AGGAATTCTGTTACGAGATCAAGCATGGAGACCTGG...GGCCAAGAGCACCCAGCCTCCCTCAGAGGGACAGGAAAACACAACATGATACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGGCTTGGAGTTTTTGCTTCAGCCCTTCACACCGTGGTGGCCCTGGAAGTTTTGCTGATGGTGCAGTaGAGTGCGTTGTTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KRLGVFASALHTVVALEVLLMVQ*SALFSW Trigger: CCAGGAGAACAACGCACTGCACTGCACCATCAGCAA...AACTTCCAGGGCCACCACGGTGTGAAGGGCTGAAGCAAAAACTCCAAGCCTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCCACCACACAGGATGGTGAAGATTCAATAAGAAGGCGTTTGCCAATTCAGCCCACCAGCAGGCCCTaGTTCTGTGAGCTGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPTTQDGEDSIRRRLPIQPTSRP*FCELYL Trigger: CAAGTACAGCTCACAGAAGCAGGGCCTGCTGGTGGG...CTGAATTGGCAAACGCCTTCTTATTGAATCTTCACCATCCTGTGTGGTGGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| CDS-3UTR TCA 90 bp | TCACTAAGCCCCATTAACTCCGGAGAGAGGGACCTGAGAGTCCTTGTCCTCAGACTGAATGTCTTGGTGTaGTTGGGCTTCAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSPINSGERDLRVLVLRLNVLV*LGFSFF Trigger: GAAGAAGCTGAAGCCCAATCACACCAAGACATTCAG...TCTGAGGACAAGGACTCTCAGGTCCCTCTCTCCGGAGTTAATGGGGCTTAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CAA 72 bp | TCACGGAGTCTATCTGCCCATCAATGCACAAGCAAGTaGGAAGCTCTGGCTGGCTACATTGTCTGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRSLSAHQCTSK*EALAGYIVCPG Trigger: TCCAGGACAGACAATGTAGCCAGCCAGAGCTTCCAACTTGCTTGTGCATTGATGGGCAGATAGACTCCGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
||
| 3UTR CAA 72 bp | AGAGGGAAACCCAGTCTCTTACAAGCAACAGGTGGCTaGGTGCTGTGGAGAGCTAGAGACCTATTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGKPSLLQATGG*VLWRARDLFSL Trigger: CAGGGAAAATAGGTCTCTAGCTCTCCACAGCACCAAGCCACCTGTTGCTTGTAAGAGACTGGGTTTCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR GCA 90 bp | GGAATGACCTTTGTTTTTGGTATCAAATTTCCTCTTTGCAACGCTGATGAGCCACATGGCAGCCAGGTGTaGACAGCGCACGATGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GMTFVFGIKFPLCNADEPHGSQV*TAHDAH Trigger: GTGGGCATCGTGCGCTGTGCACACCTGGCTGCCATG...TGGCTCATCAGCGTTGCAAAGAGGAAATTTGATACCAAAAACAAAGGTCATTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR TCA 90 bp | TCACTAAGCCCCATTAACTCCGGAGAGAGGGACCTGAGAGTCCTTGTCCTCAGAGAACCACACCACCGATaGAATCATTGGATTTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: SLSPINSGERDLRVLVLREPHHR*NHWIFQ Trigger: TTGGAAAATCCAATGATTTCATCGGTGGTGTGGTTC...TCTGAGGACAAGGACTCTCAGGTCCCTCTCTCCGGAGTTAATGGGGCTTAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR GCA 90 bp | CCTCCCACCACACAGGATGGTGAAGATTCAATAAGAAGGCGTTTGCCAATTCAGTGTTCTGAGCTTATTTaGCTTGCTGGCTCCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PPTTQDGEDSIRRRLPIQCSELI*LAGSRQ Trigger: CTGCCTGGAGCCAGCAAGGCAAATAAGCTCAGAACA...CTGAATTGGCAAACGCCTTCTTATTGAATCTTCACCATCCTGTGTGGTGGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CAA 72 bp | CCCCTTGGGAGCAAGATCAAATGGGAGAGCTTGGGTTaGAACATTGTTTCCCAAGTGCTTGTACACATCCCT | + |
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Preference number: 4 (lower is better) Translates to: PLGSKIKWESLG*NIVSQVLVHIP Trigger: AGGGATGTGTACAAGCACTTGGGAAACAATGTTCAAACCCAAGCTCTCCCATTTGATCTTGCTCCCAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| 3UTR CAA 72 bp | GACAAGATTACAAAAATTGTTTCGTGGCGCTGCAGTTaGAGGATGTATTCTGCAGTCGTCACGTGGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: DKITKIVSWRCS*RMYSAVVTWQQ Trigger: TTGCTGCCACGTGACGACTGCAGAATACATCCTCAAACTGCAGCGCCACGAAACAATTTTTGTAATCTTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR TCA 90 bp | CCTTTGTTTTTGGTATCAAATTTCCTCTTTGCAACGCTGATGAGCCAGAAGGAACATAATCCCAGACAGTaGCCTCCAGAGTCTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLFLVSNFLFATLMSQKEHNPRQ*PPESFW Trigger: CCAAAAAGACTCTGGAGGTCACTGTCTGGGATTATG...TTCCTTCTGGCTCATCAGCGTTGCAAAGAGGAAATTTGATACCAAAAACAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR GCA 90 bp | AAACAAGGCTTTCTATTTTCCACTGCTGGTCCTGACTGTCTTGATAGGGCCAGGTTCACTGCTGTCTTATaGTTGGATTTCTTGTCTACA | + |
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Preference number: 4 (lower is better) Translates to: KQGFLFSTAGPDCLDRARFTAVL*LDFLST Trigger: TGTAGACAAGAAATCCAAGCATAAGACAGCAGTGAA...CCTGGCCCTATCAAGACAGTCAGGACCAGCAGTGGAAAATAGAAAGCCTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR CCA 90 bp | CCTTTGTTTTTGGTATCAAATTTCCTCTTTGCAACGCTGATGAGCCAGAAGGAAATGTCTTGGTGTGATTaGGCTTCAGCTTCTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PLFLVSNFLFATLMSQKEMSWCD*ASASSG Trigger: CCCTGAAGAAGCTGAAGCCCAATCACACCAAGACAT...TTCCTTCTGGCTCATCAGCGTTGCAAAGAGGAAATTTGATACCAAAAACAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR CCA 90 bp | CCTCCCACCACACAGGATGGTGAAGATTCAATAAGAAGGCGTTTGCCAATTCAGTTTCTTGTCTACATCTaGCTTCAGATATGTTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPTTQDGEDSIRRRLPIQFLVYI*LQICFH Trigger: GTGAAAACATATCTGAAGCCAGATGTAGACAAGAAA...CTGAATTGGCAAACGCCTTCTTATTGAATCTTCACCATCCTGTGTGGTGGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR CAA 90 bp | GGATCTTGCCCTTGGCGGCAGCTGAGAAAGCCCAGGGTTGGACCTGTGTGGGCCATCGGCTTCAGGCCCTaGGCCTTGCTGATGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: GSCPWRQLRKPRVGPVWAIGFRP*ALLMVQ Trigger: CTGCACCATCAGCAAGGCCAAGGGCCTGAAGCCGAT...GGCCCACACAGGTCCAACCCTGGGCTTTCTCAGCTGCCGCCAAGGGCAAGATCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR CAA 90 bp | AGGTATCATGTTGTGTTTTCCTGTCCCTCTGAGGGAGGCTGGGTGCTCTTGGCCGCCCCTGGGAGCTCATaGGTGAGCGTGTGCCAACGC | + |
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Preference number: 5 (lower is better) Translates to: RYHVVFSCPSEGGWVLLAAPGSS*VSVCQR Trigger: GCGTTGGCACACGCTCACCAATGAGCTCCCAGGGGC...GGCCAAGAGCACCCAGCCTCCCTCAGAGGGACAGGAAAACACAACATGATACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR CAA 90 bp | GAGCTGAGGCTGAGGATTCCCCCAGCTCTGGCCAGCTTGGATGCCCAGGGAGCTTCATTGTGGCGGAATTaGTCCTCATCACACACGGAG | + |
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Preference number: 5 (lower is better) Translates to: ELRLRIPPALASLDAQGASLWRN*SSSHTE Trigger: CTCCGTGTGTGATGAGGACAAATTCCGCCACAATGA...AGCTCCCTGGGCATCCAAGCTGGCCAGAGCTGGGGGAATCCTCAGCCTCAGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR CAA 90 bp | CTGAGCCCTGACTCTCATGGGATGCCTTCCTTGCCCTCCACCCTTCAGCAGTCACGCTCTTCCAGAGACTaGTCCTCTGCCTTGTCCACC | + |
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Preference number: 5 (lower is better) Translates to: LSPDSHGMPSLPSTLQQSRSSRD*SSALST Trigger: GGTGGACAAGGCAGAGGACAAGTCTCTGGAAGAGCG...TGACTGCTGAAGGGTGGAGGGCAAGGAAGGCATCCCATGAGAGTCAGGGCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR CAA 90 bp | AAAAGGCTTGGAGTTTTTGCTTCAGCCCTTCACACCGTGGTGGCCCTGGAAGTTTTCAGGCGCTCGCCCTaGGCGTTGATGCCCAGAACC | + |
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Preference number: 5 (lower is better) Translates to: KRLGVFASALHTVVALEVFRRSP*ALMPRT Trigger: GGTTCTGGGCATCAACGCCAAGGGCGAGCGCCTGAA...AACTTCCAGGGCCACCACGGTGTGAAGGGCTGAAGCAAAAACTCCAAGCCTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS GCA 90 bp | CAACGCTCAATCCTCTTGTCCTTGTTCTTCAAGCAGTCAAACCAGTaGTTCAGGCGCTCGCCCTTGGCGTTGATGCCCAGAACCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: QRSILLSLFFKQSNQ*FRRSPLALMPRTTP Trigger: TGGTGTGGTTCTGGGCATCAACGCCAAGGGCGAGCGCCTGAAGCACTGGTTTGACTGCTTGAAGAACAAGGACAAGAGGATTGAGCGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR CAA 90 bp | AAAAGGCTTGGAGTTTTTGCTTCAGCCCTTCACACCGTGGTGGCCCTGGAAGTTTTCAGGCCCTTGGCCTaGCTGATGGTGCAGTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: KRLGVFASALHTVVALEVFRPLA*LMVQCS Trigger: ACTGCACTGCACCATCAGCAAGGCCAAGGGCCTGAA...AACTTCCAGGGCCACCACGGTGTGAAGGGCTGAAGCAAAAACTCCAAGCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR CAA 90 bp | CCTCCCACCACACAGGATGGTGAAGATTCAATAAGAAGGCGTTTGCCAATTCAGGACTTGTCCTCTGCCTaGTCCACCGGCAGCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: PPTTQDGEDSIRRRLPIQDLSSA*STGSCF Trigger: GAAGCAGCTGCCGGTGGACAAGGCAGAGGACAAGTC...CTGAATTGGCAAACGCCTTCTTATTGAATCTTCACCATCCTGTGTGGTGGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR CAA 90 bp | TCTGGAGCCATCTCATTTATAAAATGGGTTGACCATGCCTCCCACCACACAGGACTGAGCTTATTTGCCTaGCTGGCTCCAGGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGAISFIKWVDHASHHTGLSLFA*LAPGSR Trigger: CCTGCTGCCTGGAGCCAGCAAGGCAAATAAGCTCAG...TCCTGTGTGGTGGGAGGCATGGTCAACCCATTTTATAAATGAGATGGCTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR CAA 90 bp | GAGACCCCTTGGGAGCAAGATCAAATGGGAGAGCTTGGGTTTGAACATTGTTTCACCTCCAGAGTCTTTTaGGCCAGGTCTCCATGCTTG | + |
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Preference number: 5 (lower is better) Translates to: ETPWEQDQMGELGFEHCFTSRVF*ARSPCL Trigger: CAAGCATGGAGACCTGGCCAAAAAGACTCTGGAGGT...GAAACAATGTTCAAACCCAAGCTCTCCCATTTGATCTTGCTCCCAAGGGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR CAA 90 bp | GGAATGACCTTTGTTTTTGGTATCAAATTTCCTCTTTGCAACGCTGATGAGCCACGCTCGCCCTTGGCGTaGATGCCCAGAACCACACCA | + |
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Preference number: 5 (lower is better) Translates to: GMTFVFGIKFPLCNADEPRSPLA*MPRTTP Trigger: TGGTGTGGTTCTGGGCATCAACGCCAAGGGCGAGCG...TGGCTCATCAGCGTTGCAAAGAGGAAATTTGATACCAAAAACAAAGGTCATTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR CAA 90 bp | TCTGGAGCCATCTCATTTATAAAATGGGTTGACCATGCCTCCCACCACACAGGATTATGCTTGGATTTCTaGTCTACATCTGGCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGAISFIKWVDHASHHTGLCLDF*STSGFR Trigger: TCTGAAGCCAGATGTAGACAAGAAATCCAAGCATAA...TCCTGTGTGGTGGGAGGCATGGTCAACCCATTTTATAAATGAGATGGCTCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS-3UTR CAA 90 bp | GGAATGACCTTTGTTTTTGGTATCAAATTTCCTCTTTGCAACGCTGATGAGCCACAACGCTCAATCCTCTaGTCCTTGTTCTTCAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: GMTFVFGIKFPLCNADEPQRSIL*SLFFKQ Trigger: CTGCTTGAAGAACAAGGACAAGAGGATTGAGCGTTG...TGGCTCATCAGCGTTGCAAAGAGGAAATTTGATACCAAAAACAAAGGTCATTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS CAA 72 bp | AGGGAGATGAGGATGCGGCCTCGCTCTTCCAGAGACTaGTCCTCTGCCTTGTCCACCGGCAGCTGCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: REMRMRPRSSRD*SSALSTGSCFS Trigger: GGAGAAGCAGCTGCCGGTGGACAAGGCAGAGGACAAGTCTCTGGAAGAGCGAGGCCGCATCCTCATCTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS GCA 72 bp | AGGTGTGCACAGCGCACGATGCCCACCAGCAGGCCCTaGTTCTGTGAGCTGTACTTGAGGGAGATGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: RCAQRTMPTSRP*FCELYLREMRM Trigger: CATCCTCATCTCCCTCAAGTACAGCTCACAGAAGCAGGGCCTGCTGGTGGGCATCGTGCGCTGTGCACACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS CAA 90 bp | GCCCCTGGGAGCTCATTGGTGAGCGTGTGCCAACGCTCAATCCTCTaGTCCTTGTTCTTCAAGCAGTCAAACCAGTGCTTCAGGCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: APGSSLVSVCQRSIL*SLFFKQSNQCFRRS Trigger: CGAGCGCCTGAAGCACTGGTTTGACTGCTTGAAGAACAAGGACAAGAGGATTGAGCGTTGGCACACGCTCACCAATGAGCTCCCAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS CAA 90 bp | GGGAGCTCATTGGTGAGCGTGTGCCAACGCTCAATCCTCTTGTCCTaGTTCTTCAAGCAGTCAAACCAGTGCTTCAGGCGCTCGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: GSSLVSVCQRSILLS*FFKQSNQCFRRSPL Trigger: CAAGGGCGAGCGCCTGAAGCACTGGTTTGACTGCTTGAAGAACAAGGACAAGAGGATTGAGCGTTGGCACACGCTCACCAATGAGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS CAA 72 bp | CAGTCAAACCAGTGCTTCAGGCGCTCGCCCTTGGCGTaGATGCCCAGAACCACACCACCGATGAAATCATTG | + |
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Preference number: 6 (lower is better) Translates to: QSNQCFRRSPLA*MPRTTPPMKSL Trigger: CAATGATTTCATCGGTGGTGTGGTTCTGGGCATCAACGCCAAGGGCGAGCGCCTGAAGCACTGGTTTGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS CAA 72 bp | TTCAAGCAGTCAAACCAGTGCTTCAGGCGCTCGCCCTaGGCGTTGATGCCCAGAACCACACCACCGATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: FKQSNQCFRRSP*ALMPRTTPPMK Trigger: TTTCATCGGTGGTGTGGTTCTGGGCATCAACGCCAAGGGCGAGCGCCTGAAGCACTGGTTTGACTGCTTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS GCA 72 bp | CTGAGTACAGCCCCTGGGAGCTCATTGGTGAGCGTGTaGCAACGCTCAATCCTCTTGTCCTTGTTCTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSTAPGSSLVSV*QRSILLSLFFK Trigger: CTTGAAGAACAAGGACAAGAGGATTGAGCGTTGGCACACGCTCACCAATGAGCTCCCAGGGGCTGTACTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS CAA 72 bp | TTGGTGAGCGTGTGCCAACGCTCAATCCTCTTGTCCTaGTTCTTCAAGCAGTCAAACCAGTGCTTCAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LVSVCQRSILLS*FFKQSNQCFRR Trigger: GCGCCTGAAGCACTGGTTTGACTGCTTGAAGAACAAGGACAAGAGGATTGAGCGTTGGCACACGCTCACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS CAA 90 bp | TCCTTGTTCTTCAAGCAGTCAAACCAGTGCTTCAGGCGCTCGCCCTaGGCGTTGATGCCCAGAACCACACCACCGATGAAATCATTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLFFKQSNQCFRRSP*ALMPRTTPPMKSLD Trigger: ATCCAATGATTTCATCGGTGGTGTGGTTCTGGGCATCAACGCCAAGGGCGAGCGCCTGAAGCACTGGTTTGACTGCTTGAAGAACAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS CAA 90 bp | TTCTTCAAGCAGTCAAACCAGTGCTTCAGGCGCTCGCCCTTGGCGTaGATGCCCAGAACCACACCACCGATGAAATCATTGGATTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FFKQSNQCFRRSPLA*MPRTTPPMKSLDFP Trigger: TGGAAAATCCAATGATTTCATCGGTGGTGTGGTTCTGGGCATCAACGCCAAGGGCGAGCGCCTGAAGCACTGGTTTGACTGCTTGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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| CDS CAA 72 bp | AGCTCATTGGTGAGCGTGTGCCAACGCTCAATCCTCTaGTCCTTGTTCTTCAAGCAGTCAAACCAGTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSLVSVCQRSIL*SLFFKQSNQCF Trigger: GAAGCACTGGTTTGACTGCTTGAAGAACAAGGACAAGAGGATTGAGCGTTGGCACACGCTCACCAATGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021209.8 |
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