Pregenerated sensors for DOC2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052301Ensembl transcript IDs: ENSMUST00000064110.14, ENSMUST00000137873.8, ENSMUST00000141805.8, ENSMUST00000152051.8, ENSMUST00000176771.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCTGGAAAGGCCAAGAAAGGAGCTGCAGGATGGGGTGGGGCACTaGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATAT | + |
|
Preference number: 1 (lower is better) Translates to: SLERPRKELQDGVGH*QETPTWPCARVVAY Trigger: ATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCCACCCCATCCTGCAGCTCCTTTCTTGGCCTTTCCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR CCA 90 bp | AAGGAGCTGCAGGATGGGGTGGGGCACTGGCAGGAGACTCCCACGTaGCCCTGTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGG | + |
|
Preference number: 1 (lower is better) Translates to: KELQDGVGHWQETPT*PCARVVAYLQVTAR Trigger: CCTTGCTGTTACCTGCAAATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCCACCCCATCCTGCAGCTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR GCA 90 bp | GGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTaGATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTTTGCA | + |
|
Preference number: 1 (lower is better) Translates to: GALAGDSHVALCTGG*IFAGNSKAGRRKFA Trigger: TGCAAACTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR CCA 90 bp | GCCCTTACATCCCAGCCCCATCCAGGGAACAGTTATTTAAACGAGTaGCCAAAAGGGTCTGCTACATCTTCGGGAGGTAGAGACCTACGG | + |
|
Preference number: 1 (lower is better) Translates to: ALTSQPHPGNSYLNE*PKGSATSSGGRDLR Trigger: CCGTAGGTCTCTACCTCCCGAAGATGTAGCAGACCCTTTTGGCCACTCGTTTAAATAACTGTTCCCTGGATGGGGCTGGGATGTAAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR TCA 90 bp | CCTCAAGAGATGTTTATTGATGCCCAGTTGCCATGCTTCGGCCACTaGCACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGA | + |
|
Preference number: 1 (lower is better) Translates to: PQEMFIDAQLPCFGH*HNQKRRKHAQCPRG Trigger: TCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCGAAGCATGGCAACTGGGCATCAATAAACATCTCTTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCACTCGTGCGAAGGTTaGGTACTGGACCCGGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: IRKGVNMHNVPEEGGRVLHSCEG*VLDPAP Trigger: TGGGGCCGGGTCCAGTACCCAACCTTCGCACGAGTG...CAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR-3UTR CCA 90 bp | AAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTTAATAAGACAGGTAGTGTaGGGCAGGGGCATCCCACCC | + |
|
Preference number: 2 (lower is better) Translates to: KGVNMHNVPEEGGRVLPLIRQVV*GRGIPP Trigger: GGGTGGGATGCCCCTGCCCCACACTACCTGTCTTAT...TAAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR-3UTR CCA 90 bp | CACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTGGGGACCAGGCAGCCTaGAAAGGCCAAGAAAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: HNQKRRKHAQCPRGRWQGGDQAA*KGQERS Trigger: GCTCCTTTCTTGGCCTTTCCAGGCTGCCTGGTCCCC...ACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR-3UTR GCA 90 bp | CCATCCAGGGAACAGTTATTTAAACGAGTGGCCAAAAGGGTCTGCTACATCTTCCGTGCAACACACTCGTaGGAAGGTTGGGTACTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: PSREQLFKRVAKRVCYIFRATHS*EGWVLD Trigger: GTCCAGTACCCAACCTTCGCACGAGTGTGTTGCACG...GAAGATGTAGCAGACCCTTTTGGCCACTCGTTTAAATAACTGTTCCCTGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR-3UTR GCA 90 bp | GCCCTTACATCCCAGCCCCATCCAGGGAACAGTTATTTAAACGAGTGGCCAAAAAGGCAGGAGGAAGTTTaGATATGTGAATATAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ALTSQPHPGNSYLNEWPKRQEEV*ICEYSS Trigger: AGAGCTATATTCACATATGCAAACTTCCTCCTGCCT...TTTTGGCCACTCGTTTAAATAACTGTTCCCTGGATGGGGCTGGGATGTAAGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR GCA 72 bp | GGGCATCCCACCCCATGTAAACGTGCAACACACTCGTaGGAAGGTTGGGTACTGGACCCGGCCCCAGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GHPTPCKRATHS*EGWVLDPAPEG Trigger: GCCCTCTGGGGCCGGGTCCAGTACCCAACCTTCGCACGAGTGTGTTGCACGTTTACATGGGGTGGGATGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR CCA 72 bp | CAGGATGGGGTGGGGCACTGGCAGGAGACTCCCACGTaGCCCTGTGCACGGGTGGTTGCATATTTGCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: QDGVGHWQETPT*PCARVVAYLQV Trigger: TACCTGCAAATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCCACCCCATCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR GCA 72 bp | GCAGGAGACTCCCACGTGGCCCTGTGCACGGGTGGTTaGATATTTGCAGGTAACAGCAAGGCAGGCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AGDSHVALCTGG*IFAGNSKAGRR Trigger: CCTCCTGCCTGCCTTGCTGTTACCTGCAAATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR GCA 72 bp | GGTGGGGCACTGGCAGGAGACTCCCACGTGGCCCTGTaGACGGGTGGTTGCATATTTGCAGGTAACAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GGALAGDSHVAL*TGGCIFAGNSK Trigger: CTTGCTGTTACCTGCAAATATGCAACCACCCGTGCACAGGGCCACGTGGGAGTCTCCTGCCAGTGCCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR CCA 72 bp | GTAAACGTGCAACACACTCGTGCGAAGGTTGGGTACTaGACCCGGCCCCAGAGGGCCTGTGATGGACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VNVQHTRAKVGY*TRPQRACDGQL Trigger: CAGCTGTCCATCACAGGCCCTCTGGGGCCGGGTCCAGTACCCAACCTTCGCACGAGTGTGTTGCACGTTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGACACTCGTGCGAAGGTaGGGTACTGGACCCGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: IRKGVNMHNVPEEGGRVLTLVRR*GTGPGP Trigger: GGGGCCGGGTCCAGTACCCAACCTTCGCACGAGTGT...CAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR GCA 72 bp | ACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTaGCCTTACATCCCAGCCCCATCCAGGGAACAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: TCTMSPRKVAGS*PYIPAPSREQL Trigger: TAACTGTTCCCTGGATGGGGCTGGGATGTAAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR CCA 72 bp | GTCATTCCAGTGTTTCTGGGCCTCTCCCCGGGCTCCTaGCCCCAGAGACACACCACCTATGAAGTCATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VIPVFLGLSPGS*PQRHTTYEVIG Trigger: TCCAATGACTTCATAGGTGGTGTGTCTCTGGGGCCAGGAGCCCGGGGAGAGGCCCAGAAACACTGGAATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTCGGGTGGTTGCATATTaGCAGGTAACAGCAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: NQKRRKHAQCPRGRWQGPRVVAY*QVTARQ Trigger: CTGCCTTGCTGTTACCTGCAAATATGCAACCACCCG...AGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR CCA 72 bp | TCCCAGCCCCATCCAGGGAACAGTTATTTAAACGAGTaGCCAAAAGGGTCTGCTACATCTTCGGGAGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SQPHPGNSYLNE*PKGSATSSGGR Trigger: TCTACCTCCCGAAGATGTAGCAGACCCTTTTGGCCACTCGTTTAAATAACTGTTCCCTGGATGGGGCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTTACTCTGTATTAAAGAGTaGGCTCTTTCTTTCCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KGVNMHNVPEEGGRVLPLLCIKE*ALSFLV Trigger: GACAAGGAAAGAAAGAGCCAACTCTTTAATACAGAG...TAAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR-3UTR CAA 90 bp | GGGAACAGTTATTTAAACGAGTGGCCAAAAGGGTCTGCTACATCTTCGGGAGGTTGTCCTTTCCTCTATTaGGAAACGTCCTCCTCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: GNSYLNEWPKGSATSSGGCPFLY*ETSSSN Trigger: ATTAGAGGAGGACGTTTCCAAATAGAGGAAAGGACA...ACCTCCCGAAGATGTAGCAGACCCTTTTGGCCACTCGTTTAAATAACTGTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR TCA 72 bp | ATGTTTATTGATGCCCAGTTGCCATGCTTCGGCCACTaGCACAATCAGAAAAGGCGTAAACATGCACAATGT | + |
|
Preference number: 3 (lower is better) Translates to: MFIDAQLPCFGH*HNQKRRKHAQC Trigger: ACATTGTGCATGTTTACGCCTTTTCTGATTGTGTCAGTGGCCGAAGCATGGCAACTGGGCATCAATAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CCA 90 bp | GTGCAACACACTCGTGCGAAGGTTGGGTACTGGACCCGGCCCCAGAGGGCCTGTCTCTCCCCGGGCTCCTaGCCCCAGAGACACACCACC | + |
|
Preference number: 4 (lower is better) Translates to: VQHTRAKVGYWTRPQRACLSPGS*PQRHTT Trigger: GGTGGTGTGTCTCTGGGGCCAGGAGCCCGGGGAGAG...ACAGGCCCTCTGGGGCCGGGTCCAGTACCCAACCTTCGCACGAGTGTGTTGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR GCA 90 bp | CGTGCAACACACTCGTGCGAAGGTTGGGTACTGGACCCGGCCCCAGAGGGCCTGCTGGTCCTGGCCCCCTaGGAGGGAAGTAGTCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RATHSCEGWVLDPAPEGLLVLAP*EGSSRR Trigger: TCTCCGACTACTTCCCTCGCAGGGGGCCAGGACCAG...CAGGCCCTCTGGGGCCGGGTCCAGTACCCAACCTTCGCACGAGTGTGTTGCACG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGATCTTCTGTGAAGGCTTaGGGCGGCGGAGGGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PCARVVAYLQVTARQAGGSSVKA*GGGGAL Trigger: GAGTGCCCCTCCGCCGCCTCAAGCCTTCACAGAAGA...TCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATGCAACCACCCGTGCACAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR GCA 90 bp | CACACTCGTGCGAAGGTTGGGTACTGGACCCGGCCCCAGAGGGCCTGTGATGGATTAGCTTATTGGCCTTaGAGGCTCCTGGCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HTRAKVGYWTRPQRACDGLAYWP*RLLAGG Trigger: ACCTCCTGCCAGGAGCCTGCAAGGCCAATAAGCTAA...TCCATCACAGGCCCTCTGGGGCCGGGTCCAGTACCCAACCTTCGCACGAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR GCA 90 bp | AAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTTAAGCAGCCCAGGTCCCTaGTCTGCCTGCTCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGVNMHNVPEEGGRVLPLSSPGP*SACSSS Trigger: GGAGCTGGAGCAGGCAGAGCAGGGACCTGGGCTGCT...TAAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CCA 90 bp | CGTGCAACACACTCGTGCGAAGGTTGGGTACTGGACCCGGCCCCAGAGGGCCTGTGGTTTTTAGCTTATTaGCCTTGCAGGCTCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RATHSCEGWVLDPAPEGLWFLAY*PCRLLA Trigger: TGCCAGGAGCCTGCAAGGCCAATAAGCTAAAAACCA...CAGGCCCTCTGGGGCCGGGTCCAGTACCCAACCTTCGCACGAGTGTGTTGCACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR GCA 90 bp | ACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCAGGGTAAGCCCCTGCTaGAGGGGGCAGCTCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TIRKGVNMHNVPEEGGRVRVSPC*RGQLAG Trigger: ACCAGCGAGCTGCCCCCTGCAGCAGGGGCTTACCCT...GACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CCA 90 bp | GCCCTTACATCCCAGCCCCATCCAGGGAACAGTTATTTAAACGAGTGGCCAAAAAGGGGCCAGATGAGCTaGGGCTTCCCCGCAGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ALTSQPHPGNSYLNEWPKRGQMS*GFPAAR Trigger: ACGGGCTGCGGGGAAGCCCCAGCTCATCTGGCCCCT...TTTTGGCCACTCGTTTAAATAACTGTTCCCTGGATGGGGCTGGGATGTAAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR TCA 90 bp | GCCCTTACATCCCAGCCCCATCCAGGGAACAGTTATTTAAACGAGTGGCCAAAAGCCGAGAGCTGTAGCTaGGGCTCAGCAGGATGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALTSQPHPGNSYLNEWPKAESCS*GSAGCA Trigger: GGCGCATCCTGCTGAGCCTCAGCTACAGCTCTCGGC...TTTTGGCCACTCGTTTAAATAACTGTTCCCTGGATGGGGCTGGGATGTAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR GCA 90 bp | GACTGTGACCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAAGCAGCCCAGGTCCCTaGTCTGCCTGCTCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DCDLQGLSGQSGEFNLIESSPGP*SACSSS Trigger: GGAGCTGGAGCAGGCAGAGCAGGGACCTGGGCTGCT...TTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCTGGAGGTCACAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR CCA 90 bp | GCCCTTACATCCCAGCCCCATCCAGGGAACAGTTATTTAAACGAGTGGCCAAAAGCCACCCTCTGGTCCTaGCCCCCTGCGAGGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALTSQPHPGNSYLNEWPKATLWS*PPAREV Trigger: TACTTCCCTCGCAGGGGGCCAGGACCAGAGGGTGGC...TTTTGGCCACTCGTTTAAATAACTGTTCCCTGGATGGGGCTGGGATGTAAGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| 3UTR CAA 72 bp | ACTCCCACGTGGCCCTGTGCACGGGTGGTTGCATATTaGCAGGTAACAGCAAGGCAGGCAGGAGGAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPTWPCARVVAY*QVTARQAGGSL Trigger: CAAACTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATGCAACCACCCGTGCACAGGGCCACGTGGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR TCA 90 bp | GACCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCGCCGAGAGCTGTAGCTaGGGCTCAGCAGGATGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DLQGLSGQSGEFNLIEEFAESCS*GSAGCA Trigger: GGCGCATCCTGCTGAGCCTCAGCTACAGCTCTCGGC...GAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCTGGAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATAGCTCTCCACAGTCCCGTCCAGGGCACACGTTaGTGGCCATGTGCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKAGRRKFAYVNIALHSPVQGTR*WPCAPG Trigger: TCCAGGAGCACATGGCCATCAACGTGTGCCCTGGAC...GGGACTGTGGAGAGCTATATTCACATATGCAAACTTCCTCCTGCCTGCCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR TCA 90 bp | GAGTATGCCAGCGCTCCAGGGCTGTGTCCGGCTGATGTAGACAGTCATTCCAGTCTCGGATCTCCCCAATaGATTCATTGTGGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EYASAPGLCPADVDSHSSLGSPQ*IHCGSA Trigger: AGCTGAGCCACAATGAATTCATTGGGGAGATCCGAG...ACTGGAATGACTGTCTACATCAGCCGGACACAGCCCTGGAGCGCTGGCATACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR TCA 90 bp | CTGTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGAAAATGCTTCTTCTGTaGAGGCTTGAGGCGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCTGGCIFAGNSKAGRRKKMLLL*RLEAAE Trigger: CTCCGCCGCCTCAAGCCTTCACAGAAGAAGCATTTT...CTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATGCAACCACCCGTGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR GCA 90 bp | CTGTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGGGTCAAATTCCAGTGTaGCCAGGGCGGTGGTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCTGGCIFAGNSKAGRRKGQIPV*PGRWYH Trigger: ATGATACCACCGCCCTGGGCACACTGGAATTTGACC...CTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATGCAACCACCCGTGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR GCA 90 bp | GCCCTTACATCCCAGCCCCATCCAGGGAACAGTTATTTAAACGAGTGGCCAAAATCGCTGGTCAGAGTATaGCAGCGCTCCAGGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALTSQPHPGNSYLNEWPKSLVRV*QRSRAV Trigger: CACAGCCCTGGAGCGCTGGCATACTCTGACCAGCGA...TTTTGGCCACTCGTTTAAATAACTGTTCCCTGGATGGGGCTGGGATGTAAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR TCA 90 bp | GCCCTTACATCCCAGCCCCATCCAGGGAACAGTTATTTAAACGAGTGGCCAAAATGTGCTCCTGGATGTTaGTGGTCATGCGATCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALTSQPHPGNSYLNEWPKCAPGC*WSCDRP Trigger: GGGGCGATCGCATGACCATCAACATCCAGGAGCACA...TTTTGGCCACTCGTTTAAATAACTGTTCCCTGGATGGGGCTGGGATGTAAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR TCA 90 bp | AAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGCCCTTACTCGGATCTCCCCAATaGATTCATTGTGGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGVNMHNVPEEGGRVLPLLGSPQ*IHCGSA Trigger: AGCTGAGCCACAATGAATTCATTGGGGAGATCCGAG...TAAGGGCAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR GCA 90 bp | ATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGACGTTGATGGCCATGTaGTCCTGGATGTTGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IRKGVNMHNVPEEGGRVLTLMAM*SWMLMV Trigger: GACCATCAACATCCAGGAGCACATGGCCATCAACGT...CAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGCAGGCAGGAGGAAGTTTGCATATGTGAATATAGCTCTCCACAGTCCCGAAGGAAGCGGGACCTaGCGCTCAAGGCAGATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SKAGRRKFAYVNIALHSPEGSGT*RSRQML Trigger: TAACATCTGCCTTGAGCGCCAGGTCCCGCTTCCTTC...GGGACTGTGGAGAGCTATATTCACATATGCAAACTTCCTCCTGCCTGCCTTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR GCA 90 bp | GGGAACAGTTATTTAAACGAGTGGCCAAAAGGGTCTGCTACATCTTCGGGAGGTTCAGGTAACAGGATATaGCCCTCAGCGCCGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GNSYLNEWPKGSATSSGGSGNRI*PSAPQT Trigger: TGTCTGCGGCGCTGAGGGGCATATCCTGTTACCTGA...ACCTCCCGAAGATGTAGCAGACCCTTTTGGCCACTCGTTTAAATAACTGTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CCA 90 bp | AATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTATGGCCATGTGCTCCTaGATGTTGATGGTCATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NQKRRKHAQCPRGRWQGPMAMCS*MLMVMR Trigger: TCGCATGACCATCAACATCCAGGAGCACATGGCCAT...AGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CCA 90 bp | TGTGACCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAAGAAGGAAGCGGGACCTaGCGCTCAAGGCAGATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CDLQGLSGQSGEFNLIEEEGSGT*RSRQML Trigger: TAACATCTGCCTTGAGCGCCAGGTCCCGCTTCCTTC...TTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCTGGAGGTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR TCA 90 bp | GACCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCAAAATGCTTCTTCTGTaGAGGCTTGAGGCGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLQGLSGQSGEFNLIEEFKMLLL*RLEAAE Trigger: CTCCGCCGCCTCAAGCCTTCACAGAAGAAGCATTTT...GAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCTGGAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR GCA 90 bp | TGTGACCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAAGGTCAAATTCCAGTGTaGCCAGGGCGGTGGTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: CDLQGLSGQSGEFNLIEEGQIPV*PGRWYH Trigger: ATGATACCACCGCCCTGGGCACACTGGAATTTGACC...TTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCTGGAGGTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR GCA 90 bp | GACCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCTTAGCTTATTGGCCTTaGAGGCTCCTGGCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DLQGLSGQSGEFNLIEEFLAYWP*RLLAGG Trigger: ACCTCCTGCCAGGAGCCTGCAAGGCCAATAAGCTAA...GAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCTGGAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR CCA 90 bp | GACTGTGACCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAATGGTTTTTAGCTTATTaGCCTTGCAGGCTCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DCDLQGLSGQSGEFNLIEWFLAY*PCRLLA Trigger: TGCCAGGAGCCTGCAAGGCCAATAAGCTAAAAACCA...TTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCTGGAGGTCACAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR GCA 90 bp | GGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTCATTAAATTCCGGATTTCAGGTAACAGGATATaGCCCTCAGCGCCGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GQSGEFNLIEEFLIKFRISGNRI*PSAPQT Trigger: TGTCTGCGGCGCTGAGGGGCATATCCTGTTACCTGA...AATCCGGAATTTAATGAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR TCA 90 bp | TATTTAAACGAGTGGCCAAAAGGGTCTGCTACATCTTCGGGAGGTAGAGACCTAGAGACACACCACCTATaGAGTCATTGGATTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YLNEWPKGSATSSGGRDLETHHL*SHWICQ Trigger: TTGGCAAATCCAATGACTTCATAGGTGGTGTGTCTC...TAGGTCTCTACCTCCCGAAGATGTAGCAGACCCTTTTGGCCACTCGTTTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR GCA 90 bp | TATTTAAACGAGTGGCCAAAAGGGTCTGCTACATCTTCGGGAGGTAGAGACCTATTCTACAGTGCAGCATaGAGGAAGCCTGATCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: YLNEWPKGSATSSGGRDLFYSAA*RKPDHR Trigger: TCTATGATCAGGCTTCCTGCATGCTGCACTGTAGAA...TAGGTCTCTACCTCCCGAAGATGTAGCAGACCCTTTTGGCCACTCGTTTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR GCA 90 bp | GACTGTGACCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAAGGCAGATGTTAAAATaGTTCTTCTGTGAAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DCDLQGLSGQSGEFNLIERQMLK*FFCEGL Trigger: CAAGCCTTCACAGAAGAAGCATTTTAACATCTGCCT...TTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCTGGAGGTCACAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR GCA 90 bp | ATATGTGAATATAGCTCTCCACAGTCCCTCACAAGAAGACAGGCCCGTCACAGAAGGCAGATGTTAAAATaGTTCTTCTGTGAAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ICEYSSPQSLTRRQARHRRQMLK*FFCEGL Trigger: CAAGCCTTCACAGAAGAAGCATTTTAACATCTGCCT...TCTGTGACGGGCCTGTCTTCTTGTGAGGGACTGTGGAGAGCTATATTCACATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CCA 90 bp | GGGAACAGTTATTTAAACGAGTGGCCAAAAGGGTCTGCTACATCTTCGGGAGGTCACATGTTTTGTGCTTaGATTTCTTATCCACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GNSYLNEWPKGSATSSGGHMFCA*ISYPHL Trigger: CAGATGTGGATAAGAAATCCAAGCACAAAACATGTG...ACCTCCCGAAGATGTAGCAGACCCTTTTGGCCACTCGTTTAAATAACTGTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS TCA 90 bp | AGCGAACAATGCCCACCAGCAGCCCATGCCGCCGAGAGCTGTAGCTaGGGCTCAGCAGGATGCGCCCGCGCTCTTCCAGCAGCCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SEQCPPAAHAAESCS*GSAGCARALPAAQV Trigger: GACCTGGGCTGCTGGAAGAGCGCGGGCGCATCCTGCTGAGCCTCAGCTACAGCTCTCGGCGGCATGGGCTGCTGGTGGGCATTGTTCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS TCA 90 bp | ATCTGGTCTCAAGTACCAGCAGCCCATGCCGCCGAGAGCTGTAGCTaGGGCTCAGCAGGATGCGCCCGCGCTCTTCCAGCAGCCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: IWSQVPAAHAAESCS*GSAGCARALPAAQV Trigger: GACCTGGGCTGCTGGAAGAGCGCGGGCGCATCCTGCTGAGCCTCAGCTACAGCTCTCGGCGGCATGGGCTGCTGGTACTTGAGACCAGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR CAA 90 bp | CGTGCAACACACTCGTGCGAAGGTTGGGTACTGGACCCGGCCCCAGAGGGCCTGTTCTTCTGTGAAGGCTaGAGGCGGCGGAGGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: RATHSCEGWVLDPAPEGLFFCEG*RRRRGT Trigger: AGTGCCCCTCCGCCGCCTCAAGCCTTCACAGAAGAA...CAGGCCCTCTGGGGCCGGGTCCAGTACCCAACCTTCGCACGAGTGTGTTGCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CAA 90 bp | CACACTCGTGCGAAGGTTGGGTACTGGACCCGGCCCCAGAGGGCCTGTGATGGAGAGATCCTGAGCACCTaGTGGGTGATGTCATCATCC | + |
|
Preference number: 5 (lower is better) Translates to: HTRAKVGYWTRPQRACDGEILST*WVMSSS Trigger: GGATGATGACATCACCCACAAGGTGCTCAGGATCTC...TCCATCACAGGCCCTCTGGGGCCGGGTCCAGTACCCAACCTTCGCACGAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS GCA 90 bp | GAGGGTGAAGGAAGCGGGACCTGGCGCTCAAGGCAGATGTTAAAATaGTTCTTCTGTGAAGGCTTGAGGCGGCGGAGGGGCACTCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: EGEGSGTWRSRQMLK*FFCEGLRRRRGTRI Trigger: GATCCGAGTGCCCCTCCGCCGCCTCAAGCCTTCACAGAAGAAGCATTTTAACATCTGCCTTGAGCGCCAGGTCCCGCTTCCTTCACCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064110.14 ENSMUST00000152051.8 ENSMUST00000176771.2 |
||
| CDS-3UTR CAA 90 bp | CTGTGCACGGGTGGTTGCATATTTGCAGGTAACAGCAAGGCAGGCAGGAGGAAGATGGGCTTGAGGCCCTaGGCCCTGAGGATTCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: LCTGGCIFAGNSKAGRRKMGLRP*ALRILQ Trigger: CTGTAGAATCCTCAGGGCCAAGGGCCTCAAGCCCAT...CTTCCTCCTGCCTGCCTTGCTGTTACCTGCAAATATGCAACCACCCGTGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS GCA 90 bp | CAAGTACGTCTTCACATAAGGGTCAGAGTAGCCGTTAACATCCATTaGAGCCAGGTGCGCACAGCGAACAATGCCCACCAGCAGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: QVRLHIRVRVAVNIH*SQVRTANNAHQQPM Trigger: CATGGGCTGCTGGTGGGCATTGTTCGCTGTGCGCACCTGGCTGCAATGGATGTTAACGGCTACTCTGACCCTTATGTGAAGACGTACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CAA 90 bp | ACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCGGGTCAGCCAGGCCATaGAAATCCATGGGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TIRKGVNMHNVPEEGGRVGSARP*KSMGLR Trigger: CCTCAAGCCCATGGATTTCAATGGCCTGGCTGACCC...GACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CAA 90 bp | CACAATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTATGTGCTCCTGGATGTaGATGGTCATGCGATCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HNQKRRKHAQCPRGRWQGMCSWM*MVMRSP Trigger: GGGCGATCGCATGACCATCAACATCCAGGAGCACAT...ACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGATTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CAA 90 bp | GACTGTGACCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAATCAGCGCCGCAGACATaGAAGAGGGTGAAGGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: DCDLQGLSGQSGEFNLIESAPQT*KRVKEA Trigger: CGCTTCCTTCACCCTCTTCAATGTCTGCGGCGCTGA...TTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCTGGAGGTCACAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR CAA 90 bp | GACCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCATGGGCTTGAGGCCCTaGGCCCTGAGGATTCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: DLQGLSGQSGEFNLIEEFMGLRP*ALRILQ Trigger: CTGTAGAATCCTCAGGGCCAAGGGCCTCAAGCCCAT...GAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCTGGAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR CAA 90 bp | GGGAACAGTTATTTAAACGAGTGGCCAAAAGGGTCTGCTACATCTTCGGGAGGTTTGAAATCCATGGGCTaGAGGCCCTTGGCCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GNSYLNEWPKGSATSSGGLKSMG*RPLALR Trigger: CCTCAGGGCCAAGGGCCTCAAGCCCATGGATTTCAA...ACCTCCCGAAGATGTAGCAGACCCTTTTGGCCACTCGTTTAAATAACTGTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CAA 90 bp | GACCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCTTGAAATCCATGGGCTaGAGGCCCTTGGCCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DLQGLSGQSGEFNLIEEFLKSMG*RPLALR Trigger: CCTCAGGGCCAAGGGCCTCAAGCCCATGGATTTCAA...GAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCTGGAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR CAA 90 bp | ATCAGAAAAGGCGTAAACATGCACAATGTCCCCGAGGAAGGTGGCAGGGTCCTGTCCCCAATGAATTCATaGTGGCTCAGCTTGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IRKGVNMHNVPEEGGRVLSPMNS*WLSLSS Trigger: TGAGGACAAGCTGAGCCACAATGAATTCATTGGGGA...CAGGACCCTGCCACCTTCCTCGGGGACATTGTGCATGTTTACGCCTTTTCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CAA 90 bp | GCAGGGCTGGGATTTAGTGAAGGCTCTGTATTAAAGAGTTGGCTCTTTCTTTCCTCAGCGCCGCAGACATaGAAGAGGGTGAAGGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: AGLGFSEGSVLKSWLFLSSAPQT*KRVKEA Trigger: CGCTTCCTTCACCCTCTTCAATGTCTGCGGCGCTGA...GGAAAGAAAGAGCCAACTCTTTAATACAGAGCCTTCACTAAATCCCAGCCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CAA 90 bp | CAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTCATTGGGTCAGCCAGGCCATaGAAATCCATGGGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QGLSGQSGEFNLIEEFLIGSARP*KSMGLR Trigger: CCTCAAGCCCATGGATTTCAATGGCCTGGCTGACCC...AATGAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR CAA 90 bp | TGTGACCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAAGAGATCCTGAGCACCTaGTGGGTGATGTCATCATCC | + |
|
Preference number: 5 (lower is better) Translates to: CDLQGLSGQSGEFNLIEEEILST*WVMSSS Trigger: GGATGATGACATCACCCACAAGGTGCTCAGGATCTC...TTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCTGGAGGTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR CAA 90 bp | GGGAACAGTTATTTAAACGAGTGGCCAAAAGGGTCTGCTACATCTTCGGGAGGTTTGGTTTTTAGCTTATaGGCCTTGCAGGCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GNSYLNEWPKGSATSSGGLVFSL*ALQAPG Trigger: GCCAGGAGCCTGCAAGGCCAATAAGCTAAAAACCAA...ACCTCCCGAAGATGTAGCAGACCCTTTTGGCCACTCGTTTAAATAACTGTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS-3UTR CAA 90 bp | TGTGACCTCCAGGGTCTTAGTGGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTGGTTTTTAGCTTATaGGCCTTGCAGGCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CDLQGLSGQSGEFNLIEELVFSL*ALQAPG Trigger: GCCAGGAGCCTGCAAGGCCAATAAGCTAAAAACCAA...TTCTTCTATGAGATTGAACTCTCCACTCTGGCCACTAAGACCCTGGAGGTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR CAA 90 bp | GGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTCATTAAATTCCGGATTTTCTTCTGTGAAGGCTaGAGGCGGCGGAGGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GQSGEFNLIEEFLIKFRIFFCEG*RRRRGT Trigger: AGTGCCCCTCCGCCGCCTCAAGCCTTCACAGAAGAA...AATCCGGAATTTAATGAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS-3UTR CAA 90 bp | GGCCAGAGTGGAGAGTTCAATCTCATAGAAGAATTCCTCATTAAATTCCGGATTTCCCCAATGAATTCATaGTGGCTCAGCTTGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GQSGEFNLIEEFLIKFRISPMNS*WLSLSS Trigger: TGAGGACAAGCTGAGCCACAATGAATTCATTGGGGA...AATCCGGAATTTAATGAGGAATTCTTCTATGAGATTGAACTCTCCACTCTGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS TCA 72 bp | TGCCCACCAGCAGCCCATGCCGCCGAGAGCTGTAGCTaGGGCTCAGCAGGATGCGCCCGCGCTCTTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CPPAAHAAESCS*GSAGCARALPA Trigger: TGCTGGAAGAGCGCGGGCGCATCCTGCTGAGCCTCAGCTACAGCTCTCGGCGGCATGGGCTGCTGGTGGGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS TCA 72 bp | CAAGTACCAGCAGCCCATGCCGCCGAGAGCTGTAGCTaGGGCTCAGCAGGATGCGCCCGCGCTCTTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QVPAAHAAESCS*GSAGCARALPA Trigger: TGCTGGAAGAGCGCGGGCGCATCCTGCTGAGCCTCAGCTACAGCTCTCGGCGGCATGGGCTGCTGGTACTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176771.2 |
||
| CDS CAA 72 bp | TCAGGTAACAGGATATGCCCCTCAGCGCCGCAGACATaGAAGAGGGTGAAGGAAGCGGGACCTGGCGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: SGNRICPSAPQT*KRVKEAGPGAQ Trigger: TTGAGCGCCAGGTCCCGCTTCCTTCACCCTCTTCAATGTCTGCGGCGCTGAGGGGCATATCCTGTTACCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064110.14 ENSMUST00000152051.8 ENSMUST00000176771.2 |
||
| CDS GCA 72 bp | CTTCACATAAGGGTCAGAGTAGCCGTTAACATCCATTaGAGCCAGGTGCGCACAGCGAACAATGCCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LHIRVRVAVNIH*SQVRTANNAHQ Trigger: CTGGTGGGCATTGTTCGCTGTGCGCACCTGGCTGCAATGGATGTTAACGGCTACTCTGACCCTTATGTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064110.14 |
||
| CDS GCA 72 bp | AGGAAGCCTGATCATAGAGAAGGTCAAATTCCAGTGTaGCCAGGGCGGTGGTATCATCCGAGTCGTAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RKPDHREGQIPV*PGRWYHPSRSC Trigger: ACAGCTACGACTCGGATGATACCACCGCCCTGGGCACACTGGAATTTGACCTTCTCTATGATCAGGCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064110.14 ENSMUST00000137873.8 ENSMUST00000141805.8 ENSMUST00000152051.8 ENSMUST00000176771.2 |
||