RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNTTIP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039756

Ensembl transcript IDs: ENSMUST00000035776.10

Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GTGCTTTCTAGATGTGTCCCAATTCTCCGAGGAGCAGACCTCTTCTaGTGGGAGCTTTCTTGGAGCCTGGTCCGGGAGAGCCCGGACCTG +
Preference number: 5 (lower is better)
Translates to: VLSRCVPILRGADLF*WELSWSLVRESPDL
Trigger: CAGGTCCGGGCTCTCCCGGACCAGGCTCCAAGAAAGCTCCCAGCAGAAGAGGTCTGCTCCTCGGAGAATTGGGACACATCTAGAAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CCA 90 bp CTTTCTAGATGTGTCCCAATTCTCCGAGGAGCAGACCTCTTCTGCTaGGAGCTTTCTTGGAGCCTGGTCCGGGAGAGCCCGGACCTGGTG +
Preference number: 5 (lower is better)
Translates to: LSRCVPILRGADLFC*ELSWSLVRESPDLV
Trigger: CACCAGGTCCGGGCTCTCCCGGACCAGGCTCCAAGAAAGCTCCCAGCAGAAGAGGTCTGCTCCTCGGAGAATTGGGACACATCTAGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS GCA 90 bp CCTGTGGTTCTGCTGCTGCTGCGTGAGTGCTGTTTCTCAGCAGGCTaGGATTCAGCTGTGCTGCCATCGGATCCCGATTCCTTTGTGCTT +
Preference number: 5 (lower is better)
Translates to: PVVLLLLRECCFSAG*DSAVLPSDPDSFVL
Trigger: AAGCACAAAGGAATCGGGATCCGATGGCAGCACAGCTGAATCGCAGCCTGCTGAGAAACAGCACTCACGCAGCAGCAGCAGAACCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CCA 90 bp TCAGACTTGCATGGTTTGGTATCACATTCAAGAGGGACACCACTTTaGCTGCTCTTGTCATCACTGATACCTGCACCCGTGGGCTCGTTG +
Preference number: 5 (lower is better)
Translates to: SDLHGLVSHSRGTPL*LLLSSLIPAPVGSL
Trigger: CAACGAGCCCACGGGTGCAGGTATCAGTGATGACAAGAGCAGCCAAAGTGGTGTCCCTCTTGAATGTGATACCAAACCATGCAAGTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CCA 90 bp CTGTCACAGGCGGCATCTTCCAGGTCCTCAGCTGATGCCTCCTTTTaGCCATTGTTTTCAACAGAACACAAAGTGTCCCTTTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: LSQAASSRSSADASF*PLFSTEHKVSLSFS
Trigger: TGAGAATGAAAGGGACACTTTGTGTTCTGTTGAAAACAATGGCCAAAAGGAGGCATCAGCTGAGGACCTGGAAGATGCCGCCTGTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CCA 90 bp TATTTGGGGTGCTTGAATGATTCTGAGACACTGACTGCTGAAGGCTaGTGTCTTGAGCTTCAGAAAGACTCCGCTGGGAATCTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: YLGCLNDSETLTAEG*CLELQKDSAGNLSH
Trigger: ATGAGAAAGATTCCCAGCGGAGTCTTTCTGAAGCTCAAGACACCAGCCTTCAGCAGTCAGTGTCTCAGAATCATTCAAGCACCCCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS GCA 90 bp TGCCTTTTCCTAACAGTGGACTTTGAGGTGGAAGCAATTACGATCTaGCGTTTCCTAGTTACTCTTACAATGGGCTCTTGGTCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: CLFLTVDFEVEAITI*RFLVTLTMGSWSSN
Trigger: GTTAGAGGACCAAGAGCCCATTGTAAGAGTAACTAGGAAACGGCAGATCGTAATTGCTTCCACCTCAAAGTCCACTGTTAGGAAAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS GCA 90 bp TCAACAGAACACAAAGTGTCCCTTTCATTCTCACTGCTGTCAGACTaGTGGCTTTCATCGCTGCTAAGAAATAATAAGACAGGACTGTCC +
Preference number: 5 (lower is better)
Translates to: STEHKVSLSFSLLSD*WLSSLLRNNKTGLS
Trigger: GGACAGTCCTGTCTTATTATTTCTTAGCAGCGATGAAAGCCAGCAGTCTGACAGCAGTGAGAATGAAAGGGACACTTTGTGTTCTGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CCA 90 bp ACAGAACACAAAGTGTCCCTTTCATTCTCACTGCTGTCAGACTGCTaGCTTTCATCGCTGCTAAGAAATAATAAGACAGGACTGTCCGTA +
Preference number: 5 (lower is better)
Translates to: TEHKVSLSFSLLSDC*LSSLLRNNKTGLSV
Trigger: TACGGACAGTCCTGTCTTATTATTTCTTAGCAGCGATGAAAGCCAGCAGTCTGACAGCAGTGAGAATGAAAGGGACACTTTGTGTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS TCA 90 bp ATTTCTGCTGCTTCTCTCTGTGGAAGGTACAACCATAGAAACCCCTaGAACATGAGACTCTGCTTCAGAAACAACAACTTCATCAGCAGA +
Preference number: 5 (lower is better)
Translates to: ISAASLCGRYNHRNP*NMRLCFRNNNFISR
Trigger: TCTGCTGATGAAGTTGTTGTTTCTGAAGCAGAGTCTCATGTTTCAGGGGTTTCTATGGTTGTACCTTCCACAGAGAGAAGCAGCAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS GCA 90 bp CCTCTCTTGTCATTCCACCTTTCTACATTCACAACTGCAAACTTGTaGTCTAATGATTTCATTAGAGCCTTCCGATCTGGACTTGAAAGC +
Preference number: 5 (lower is better)
Translates to: PLLSFHLSTFTTANL*SNDFIRAFRSGLES
Trigger: GCTTTCAAGTCCAGATCGGAAGGCTCTAATGAAATCATTAGAGCACAAGTTTGCAGTTGTGAATGTAGAAAGGTGGAATGACAAGAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CCA 72 bp CTCCGAGGAGCAGACCTCTTCTGCTGGGAGCTTTCTTaGAGCCTGGTCCGGGAGAGCCCGGACCTGGTGACC +
Preference number: 6 (lower is better)
Translates to: LRGADLFCWELS*SLVRESPDLVT
Trigger: GGTCACCAGGTCCGGGCTCTCCCGGACCAGGCTCCAAGAAAGCTCCCAGCAGAAGAGGTCTGCTCCTCGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CAA 72 bp TCTCCGAGGAGCAGACCTCTTCTGCTGGGAGCTTTCTaGGAGCCTGGTCCGGGAGAGCCCGGACCTGGTGAC +
Preference number: 6 (lower is better)
Translates to: SPRSRPLLLGAF*EPGPGEPGPGD
Trigger: GTCACCAGGTCCGGGCTCTCCCGGACCAGGCTCCAAGAAAGCTCCCAGCAGAAGAGGTCTGCTCCTCGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CCA 72 bp TGTGTCCCAATTCTCCGAGGAGCAGACCTCTTCTGCTaGGAGCTTTCTTGGAGCCTGGTCCGGGAGAGCCCG +
Preference number: 6 (lower is better)
Translates to: CVPILRGADLFC*ELSWSLVRESP
Trigger: CGGGCTCTCCCGGACCAGGCTCCAAGAAAGCTCCCAGCAGAAGAGGTCTGCTCCTCGGAGAATTGGGACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS GCA 72 bp CTGCTGCTGCTGCGTGAGTGCTGTTTCTCAGCAGGCTaGGATTCAGCTGTGCTGCCATCGGATCCCGATTCC +
Preference number: 6 (lower is better)
Translates to: LLLLRECCFSAG*DSAVLPSDPDS
Trigger: GGAATCGGGATCCGATGGCAGCACAGCTGAATCGCAGCCTGCTGAGAAACAGCACTCACGCAGCAGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CAA 90 bp CTTTGGCTGCTCTTGTCATCACTGATACCTGCACCCGTGGGCTCGTaGTCATCACCACCACCACCACCACCACCGAGCTGTGCCAAGTCA +
Preference number: 6 (lower is better)
Translates to: LWLLLSSLIPAPVGS*SSPPPPPPPSCAKS
Trigger: TGACTTGGCACAGCTCGGTGGTGGTGGTGGTGGTGGTGATGACAACGAGCCCACGGGTGCAGGTATCAGTGATGACAAGAGCAGCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS GCA 72 bp AGATGTGTCCCAATTCTCCGAGGAGCAGACCTCTTCTaGTGGGAGCTTTCTTGGAGCCTGGTCCGGGAGAGC +
Preference number: 6 (lower is better)
Translates to: RCVPILRGADLF*WELSWSLVRES
Trigger: GCTCTCCCGGACCAGGCTCCAAGAAAGCTCCCAGCAGAAGAGGTCTGCTCCTCGGAGAATTGGGACACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CAA 72 bp CTCTTGTCATCACTGATACCTGCACCCGTGGGCTCGTaGTCATCACCACCACCACCACCACCACCGAGCTGT +
Preference number: 6 (lower is better)
Translates to: LLSSLIPAPVGS*SSPPPPPPPSC
Trigger: ACAGCTCGGTGGTGGTGGTGGTGGTGGTGATGACAACGAGCCCACGGGTGCAGGTATCAGTGATGACAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CAA 72 bp GCGATTCAGCTGTGCTGCCATCGGATCCCGATTCCTTaGTGCTTTCTAGATGTGTCCCAATTCTCCGAGGAG +
Preference number: 6 (lower is better)
Translates to: AIQLCCHRIPIP*CFLDVSQFSEE
Trigger: CTCCTCGGAGAATTGGGACACATCTAGAAAGCACAAAGGAATCGGGATCCGATGGCAGCACAGCTGAATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CAA 90 bp CATGGTTTGGTATCACATTCAAGAGGGACACCACTTTGGCTGCTCTaGTCATCACTGATACCTGCACCCGTGGGCTCGTTGTCATCACCA +
Preference number: 6 (lower is better)
Translates to: HGLVSHSRGTPLWLL*SSLIPAPVGSLSSP
Trigger: TGGTGATGACAACGAGCCCACGGGTGCAGGTATCAGTGATGACAAGAGCAGCCAAAGTGGTGTCCCTCTTGAATGTGATACCAAACCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS TCA 72 bp TGCACTGTCACAGGCGGCATCTTCCAGGTCCTCAGCTaGTGCCTCCTTTTGGCCATTGTTTTCAACAGAACA +
Preference number: 6 (lower is better)
Translates to: CTVTGGIFQVLS*CLLLAIVFNRT
Trigger: TGTTCTGTTGAAAACAATGGCCAAAAGGAGGCATCAGCTGAGGACCTGGAAGATGCCGCCTGTGACAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS GCA 72 bp ATTCAGCTGTGCTGCCATCGGATCCCGATTCCTTTGTaGTTTCTAGATGTGTCCCAATTCTCCGAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: IQLCCHRIPIPL*FLDVSQFSEEQ
Trigger: CTGCTCCTCGGAGAATTGGGACACATCTAGAAAGCACAAAGGAATCGGGATCCGATGGCAGCACAGCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CAA 90 bp TTCAGACTTGCATGGTTTGGTATCACATTCAAGAGGGACACCACTTaGGCTGCTCTTGTCATCACTGATACCTGCACCCGTGGGCTCGTT +
Preference number: 6 (lower is better)
Translates to: FRLAWFGITFKRDTT*AALVITDTCTRGLV
Trigger: AACGAGCCCACGGGTGCAGGTATCAGTGATGACAAGAGCAGCCAAAGTGGTGTCCCTCTTGAATGTGATACCAAACCATGCAAGTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CAA 90 bp CAGGCGGCATCTTCCAGGTCCTCAGCTGATGCCTCCTTTTGGCCATaGTTTTCAACAGAACACAAAGTGTCCCTTTCATTCTCACTGCTG +
Preference number: 6 (lower is better)
Translates to: QAASSRSSADASFWP*FSTEHKVSLSFSLL
Trigger: CAGCAGTGAGAATGAAAGGGACACTTTGTGTTCTGTTGAAAACAATGGCCAAAAGGAGGCATCAGCTGAGGACCTGGAAGATGCCGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CAA 72 bp GCATGGTTTGGTATCACATTCAAGAGGGACACCACTTaGGCTGCTCTTGTCATCACTGATACCTGCACCCGT +
Preference number: 6 (lower is better)
Translates to: AWFGITFKRDTT*AALVITDTCTR
Trigger: ACGGGTGCAGGTATCAGTGATGACAAGAGCAGCCAAAGTGGTGTCCCTCTTGAATGTGATACCAAACCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CCA 72 bp TGCTTGAATGATTCTGAGACACTGACTGCTGAAGGCTaGTGTCTTGAGCTTCAGAAAGACTCCGCTGGGAAT +
Preference number: 6 (lower is better)
Translates to: CLNDSETLTAEG*CLELQKDSAGN
Trigger: ATTCCCAGCGGAGTCTTTCTGAAGCTCAAGACACCAGCCTTCAGCAGTCAGTGTCTCAGAATCATTCAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS TCA 72 bp GCTTCAGAAACAACAACTTCATCAGCAGATGCATGCTaGGGGGCTACTTTCTGCCTTTTCCTAACAGTGGAC +
Preference number: 6 (lower is better)
Translates to: ASETTTSSADAC*GATFCLFLTVD
Trigger: GTCCACTGTTAGGAAAAGGCAGAAAGTAGCCCCTCAGCATGCATCTGCTGATGAAGTTGTTGTTTCTGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS GCA 72 bp TGGCTGTTGTTCTCGGCAAGATCTCTAACGATGAAATaGCTGAGCAGGACAACTCAGCATCAGATACAGTTC +
Preference number: 6 (lower is better)
Translates to: WLLFSARSLTMK*LSRTTQHQIQF
Trigger: GAACTGTATCTGATGCTGAGTTGTCCTGCTCAGGCATTTCATCGTTAGAGATCTTGCCGAGAACAACAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS GCA 72 bp AGACTCTGCTTCAGAAACAACAACTTCATCAGCAGATaGATGCTGAGGGGCTACTTTCTGCCTTTTCCTAAC +
Preference number: 6 (lower is better)
Translates to: RLCFRNNNFISR*MLRGYFLPFPN
Trigger: GTTAGGAAAAGGCAGAAAGTAGCCCCTCAGCATGCATCTGCTGATGAAGTTGTTGTTTCTGAAGCAGAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CAA 90 bp CCCCCTCTCTTGTCATTCCACCTTTCTACATTCACAACTGCAAACTaGTGCTCTAATGATTTCATTAGAGCCTTCCGATCTGGACTTGAA +
Preference number: 6 (lower is better)
Translates to: PPLLSFHLSTFTTAN*CSNDFIRAFRSGLE
Trigger: TTCAAGTCCAGATCGGAAGGCTCTAATGAAATCATTAGAGCACAAGTTTGCAGTTGTGAATGTAGAAAGGTGGAATGACAAGAGAGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CCA 72 bp AAAGTGTCCCTTTCATTCTCACTGCTGTCAGACTGCTaGCTTTCATCGCTGCTAAGAAATAATAAGACAGGA +
Preference number: 6 (lower is better)
Translates to: KVSLSFSLLSDC*LSSLLRNNKTG
Trigger: TCCTGTCTTATTATTTCTTAGCAGCGATGAAAGCCAGCAGTCTGACAGCAGTGAGAATGAAAGGGACACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS TCA 72 bp CACAATCGTCTTTTTCCTCTGTTTCTTGGGAATTCGTaGATGGTAGAAGTCGGCTGGATTATCAACAATGGT +
Preference number: 6 (lower is better)
Translates to: HNRLFPLFLGNS*MVEVGWIINNG
Trigger: ACCATTGTTGATAATCCAGCCGACTTCTACCATTCACGAATTCCCAAGAAACAGAGGAAAAAGACGATTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CAA 72 bp TCTACATTGAAATTAATATACAGACCACCCAACTGCTaGATGTTCAGTCCAGGGTCTATGCTGCTACTTGTC +
Preference number: 6 (lower is better)
Translates to: STLKLIYRPPNC*MFSPGSMLLLV
Trigger: GACAAGTAGCAGCATAGACCCTGGACTGAACATCAAGCAGTTGGGTGGTCTGTATATTAATTTCAATGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS GCA 72 bp TCATTCCACCTTTCTACATTCACAACTGCAAACTTGTaGTCTAATGATTTCATTAGAGCCTTCCGATCTGGA +
Preference number: 6 (lower is better)
Translates to: SFHLSTFTTANL*SNDFIRAFRSG
Trigger: TCCAGATCGGAAGGCTCTAATGAAATCATTAGAGCACAAGTTTGCAGTTGTGAATGTAGAAAGGTGGAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS GCA 72 bp TTGTCTACATTGAAATTAATATACAGACCACCCAACTaGTTGATGTTCAGTCCAGGGTCTATGCTGCTACTT +
Preference number: 6 (lower is better)
Translates to: LSTLKLIYRPPN*LMFSPGSMLLL
Trigger: AAGTAGCAGCATAGACCCTGGACTGAACATCAAGCAGTTGGGTGGTCTGTATATTAATTTCAATGTAGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CAA 72 bp TTGTCATTCCACCTTTCTACATTCACAACTGCAAACTaGTGCTCTAATGATTTCATTAGAGCCTTCCGATCT +
Preference number: 6 (lower is better)
Translates to: LSFHLSTFTTAN*CSNDFIRAFRS
Trigger: AGATCGGAAGGCTCTAATGAAATCATTAGAGCACAAGTTTGCAGTTGTGAATGTAGAAAGGTGGAATGACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10
CDS CAA 72 bp CAAAGTCACTGTTGTAAGTTTCACTATCAGAAACATTaGGCATATTTCTCTGAGAAAGTGGTCTTGCTGATA +
Preference number: 6 (lower is better)
Translates to: QSHCCKFHYQKH*AYFSEKVVLLI
Trigger: TATCAGCAAGACCACTTTCTCAGAGAAATATGCCAAATGTTTCTGATAGTGAAACTTACAACAGTGACTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000035776.10