Pregenerated sensors for DNTTIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017299Ensembl transcript IDs: ENSMUST00000017443.14, ENSMUST00000109326.10, ENSMUST00000109327.4
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCACCTTGTGCAACATTCCTAAACTGGAACAAGGCCAGGGCAGCCTaGCAGAGAACACAGATGGGGGCGGGTAGGCGGGCAGGTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SPCATFLNWNKARAA*QRTQMGAGRRAGGQ Trigger: CTGCCCACCTGCCCGCCTACCCGCCCCCATCTGTGTTCTCTGCCAGGCTGCCCTGGCCTTGTTCCAGTTTAGGAATGTTGCACAAGGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR CCA 90 bp | CAGATGGGGGCGGGTAGGCGGGCAGGTGGGCAGGTGGTCCTTTTCTaGTGTGCATACTTCTTTGGCAGACATTATAGCAGGCTCACTACC | + |
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Preference number: 1 (lower is better) Translates to: QMGAGRRAGGQVVLF*CAYFFGRHYSRLTT Trigger: GGTAGTGAGCCTGCTATAATGTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCACCTGCCCGCCTACCCGCCCCCATCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR CCA 90 bp | GGCAGAGAACACAGATGGGGGCGGGTAGGCGGGCAGGTGGGCAGGTaGTCCTTTTCTGGTGTGCATACTTCTTTGGCAGACATTATAGCA | + |
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Preference number: 1 (lower is better) Translates to: GREHRWGRVGGQVGR*SFSGVHTSLADIIA Trigger: TGCTATAATGTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCACCTGCCCGCCTACCCGCCCCCATCTGTGTTCTCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR GCA 90 bp | CTTATTCCAATAACTTTAGAAACAGAACCACATGCCAGTCTGGGGTaGTCTGCAGTGAGTCACTACAAACTAGCTCATGTACAGCTTAAT | + |
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Preference number: 1 (lower is better) Translates to: LIPITLETEPHASLG*SAVSHYKLAHVQLN Trigger: ATTAAGCTGTACATGAGCTAGTTTGTAGTGACTCACTGCAGAGCACCCCAGACTGGCATGTGGTTCTGTTTCTAAAGTTATTGGAATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR GCA 90 bp | TGTTTAATTGCTTCTTATTCCAATAACTTTAGAAACAGAACCACATaGCAGTCTGGGGTGCTCTGCAGTGAGTCACTACAAACTAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: CLIASYSNNFRNRTT*QSGVLCSESLQTSS Trigger: TGAGCTAGTTTGTAGTGACTCACTGCAGAGCACCCCAGACTGGCATGTGGTTCTGTTTCTAAAGTTATTGGAATAAGAAGCAATTAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR-3UTR GCA 90 bp | ACAAGGCCAGGGCAGCCTGGCAGAGAACACAGATGGGGGCGGGTAGGCGGGCAGCATGCCAGTCTGGGGTaGTCTGCAGTGAGTCACTAC | + |
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Preference number: 2 (lower is better) Translates to: TRPGQPGREHRWGRVGGQHASLG*SAVSHY Trigger: GTAGTGACTCACTGCAGAGCACCCCAGACTGGCATG...CTGCCCGCCTACCCGCCCCCATCTGTGTTCTCTGCCAGGCTGCCCTGGCCTTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR-3UTR GCA 90 bp | ACAAGGCCAGGGCAGCCTGGCAGAGAACACAGATGGGGGCGGGTAGGCGGGCAGAGAAACAGAACCACATaGCAGTCTGGGGTGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: TRPGQPGREHRWGRVGGQRNRTT*QSGVLC Trigger: GCAGAGCACCCCAGACTGGCATGTGGTTCTGTTTCT...CTGCCCGCCTACCCGCCCCCATCTGTGTTCTCTGCCAGGCTGCCCTGGCCTTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAAAGCACAATGGCCTCAGCCGGGTaGGGAAAGAGGGTCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SRSARVYVRDTVSTPKSTMASAG*GKRVLE Trigger: CTCCAAGACCCTCTTTCCCCACCCGGCTGAGGCCAT...TGTGCTTTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAAGGGCAGGTGGGCAGGTaGTCCTTTTCTGGTGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LSSRSARVYVRDTVSTPKGQVGR*SFSGVH Trigger: ATGCACACCAGAAAAGGACCACCTGCCCACCTGCCC...TTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR CAA 90 bp | GGCGGGCAGGTGGGCAGGTGGTCCTTTTCTGGTGTGCATACTTCTTaGGCAGACATTATAGCAGGCTCACTACCTGTGTTTATTACAAAC | + |
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Preference number: 2 (lower is better) Translates to: GGQVGRWSFSGVHTS*ADIIAGSLPVFITN Trigger: GTTTGTAATAAACACAGGTAGTGAGCCTGCTATAATGTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCACCTGCCCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR-3UTR GCA 90 bp | GGCGAGACCTCTGAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCCCAGTCTTCACCTTGTaGAACATTCCTAAACTGGAA | + |
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Preference number: 2 (lower is better) Translates to: GETSELKVSQGVCKRYCLPVFTL*NIPKLE Trigger: TTCCAGTTTAGGAATGTTGCACAAGGTGAAGACTGG...GAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTCAGAGGTCTCGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR CCA 72 bp | GCAACATTCCTAAACTGGAACAAGGCCAGGGCAGCCTaGCAGAGAACACAGATGGGGGCGGGTAGGCGGGCA | + |
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Preference number: 3 (lower is better) Translates to: ATFLNWNKARAA*QRTQMGAGRRA Trigger: TGCCCGCCTACCCGCCCCCATCTGTGTTCTCTGCCAGGCTGCCCTGGCCTTGTTCCAGTTTAGGAATGTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR-3UTR CAA 90 bp | AACTGGAACAAGGCCAGGGCAGCCTGGCAGAGAACACAGATGGGGGCGGGTAGGGGTGTGCATACTTCTTaGGCAGACATTATAGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: NWNKARAAWQRTQMGAGRGVHTS*ADIIAG Trigger: GCCTGCTATAATGTCTGCCAAAGAAGTATGCACACC...CCTACCCGCCCCCATCTGTGTTCTCTGCCAGGCTGCCCTGGCCTTGTTCCAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR CCA 72 bp | GCGGGTAGGCGGGCAGGTGGGCAGGTGGTCCTTTTCTaGTGTGCATACTTCTTTGGCAGACATTATAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: AGRRAGGQVVLF*CAYFFGRHYSR Trigger: CCTGCTATAATGTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCACCTGCCCGCCTACCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR GCA 72 bp | TTTAGAAACAGAACCACATGCCAGTCTGGGGTGCTCTaGAGTGAGTCACTACAAACTAGCTCATGTACAGCT | + |
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Preference number: 3 (lower is better) Translates to: FRNRTTCQSGVL*SESLQTSSCTA Trigger: AGCTGTACATGAGCTAGTTTGTAGTGACTCACTGCAGAGCACCCCAGACTGGCATGTGGTTCTGTTTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR GCA 72 bp | ATAACTTTAGAAACAGAACCACATGCCAGTCTGGGGTaGTCTGCAGTGAGTCACTACAAACTAGCTCATGTA | + |
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Preference number: 3 (lower is better) Translates to: ITLETEPHASLG*SAVSHYKLAHV Trigger: TACATGAGCTAGTTTGTAGTGACTCACTGCAGAGCACCCCAGACTGGCATGTGGTTCTGTTTCTAAAGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR TCA 90 bp | ACAAGGCCAGGGCAGCCTGGCAGAGAACACAGATGGGGGCGGGTAGGCGGGCAGAGCTGCGCGGTCATTTaGCAGGACGTGTCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TRPGQPGREHRWGRVGGQSCAVI*QDVSRR Trigger: CCTCCTGGACACGTCCTGTCAAATGACCGCGCAGCT...CTGCCCGCCTACCCGCCCCCATCTGTGTTCTCTGCCAGGCTGCCCTGGCCTTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR TCA 90 bp | AACTGGAACAAGGCCAGGGCAGCCTGGCAGAGAACACAGATGGGGGCGGGTAGGCTGCGGCAGGCCTCCTaGATCAACTGCTCTGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: NWNKARAAWQRTQMGAGRLRQAS*INCSAS Trigger: GGACGCAGAGCAGTTGATTCAGGAGGCCTGCCGCAG...CCTACCCGCCCCCATCTGTGTTCTCTGCCAGGCTGCCCTGGCCTTGTTCCAGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR GCA 90 bp | AACTGGAACAAGGCCAGGGCAGCCTGGCAGAGAACACAGATGGGGGCGGGTAGGCGGCGGCCCCTTCGCTaGACCTGCCGATGTTTTATC | + |
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Preference number: 4 (lower is better) Translates to: NWNKARAAWQRTQMGAGRRRPLR*TCRCFI Trigger: GATAAAACATCGGCAGGTGCAGCGAAGGGGCCGCCG...CCTACCCGCCCCCATCTGTGTTCTCTGCCAGGCTGCCCTGGCCTTGTTCCAGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR TCA 90 bp | GGCGGGCAGGTGGGCAGGTGGTCCTTTTCTGGTGTGCATACTTCTTTGGCAGACCCTGTTGCCCGCATGTaGTGCTGCTCAGCCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GGQVGRWSFSGVHTSLADPVARM*CCSASQ Trigger: CTGGCTGGCTGAGCAGCATCACATGCGGGCAACAGG...GTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCACCTGCCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR GCA 90 bp | GGCGGGCAGGTGGGCAGGTGGTCCTTTTCTGGTGTGCATACTTCTTTGGCAGACCCTGCTCCAGGCAGCTaGGGCAGGCCTCCTGAATCA | + |
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Preference number: 4 (lower is better) Translates to: GGQVGRWSFSGVHTSLADPAPGS*GRPPES Trigger: TGATTCAGGAGGCCTGCCGCAGCTGCCTGGAGCAGG...GTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCACCTGCCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR GCA 90 bp | ACAAGGCCAGGGCAGCCTGGCAGAGAACACAGATGGGGGCGGGTAGGCGGGCAGCCCCTTCGCTGCACCTaGCGATGTTTTATCATTATG | + |
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Preference number: 4 (lower is better) Translates to: TRPGQPGREHRWGRVGGQPLRCT*RCFIIM Trigger: CATAATGATAAAACATCGGCAGGTGCAGCGAAGGGG...CTGCCCGCCTACCCGCCCCCATCTGTGTTCTCTGCCAGGCTGCCCTGGCCTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR CCA 90 bp | GGCGGGCAGGTGGGCAGGTGGTCCTTTTCTGGTGTGCATACTTCTTTGGCAGACGAGCTGGGTCCCACTTaGGGCCTTCTCGGCGAATTG | + |
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Preference number: 4 (lower is better) Translates to: GGQVGRWSFSGVHTSLADELGPT*GLLGEL Trigger: CAATTCGCCGAGAAGGCCCCAAGTGGGACCCAGCTC...GTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCACCTGCCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR CCA 90 bp | GGCGGGCAGGTGGGCAGGTGGTCCTTTTCTGGTGTGCATACTTCTTTGGCAGACCTCTGTAGTCATCGCTaGCAGCCAAGTCCCGGATGT | + |
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Preference number: 4 (lower is better) Translates to: GGQVGRWSFSGVHTSLADLCSHR*QPSPGC Trigger: ACATCCGGGACTTGGCTGCCAGCGATGACTACAGAG...GTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCACCTGCCCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR TCA 90 bp | AACTGGAACAAGGCCAGGGCAGCCTGGCAGAGAACACAGATGGGGGCGGGTAGGACTTCATGTACTTGTTaGAGACACCCTGGATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: NWNKARAAWQRTQMGAGRTSCTC*RHPGSP Trigger: AGGAGATCCAGGGTGTCTTCAACAAGTACATGAAGT...CCTACCCGCCCCCATCTGTGTTCTCTGCCAGGCTGCCCTGGCCTTGTTCCAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR CCA 90 bp | GGCGGGCAGGTGGGCAGGTGGTCCTTTTCTGGTGTGCATACTTCTTTGGCAGACGACCTTTCCTCTTTTTaGGAATGGGGCTTCCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: GGQVGRWSFSGVHTSLADDLSSF*EWGFLG Trigger: ACCGAGGAAGCCCCATTCCCAAAAAGAGGAAAGGTC...GTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCACCTGCCCGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR GCA 90 bp | GGCGAGACCTCTGAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCCATCTTTCCGCCTGTTaGCCGCATGTGATGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GETSELKVSQGVCKRYCLHLSAC*PHVMLL Trigger: GAGCAGCATCACATGCGGGCAACAGGCGGAAAGATG...GAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTCAGAGGTCTCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR CCA 90 bp | CGGGCAGGTGGGCAGGTGGTCCTTTTCTGGTGTGCATACTTCTTTGGCAGACATTCCTCTTTTTGGGAATaGGGCTTCCTCGGTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: RAGGQVVLFWCAYFFGRHSSFWE*GFLGGT Trigger: AGTCCCACCGAGGAAGCCCCATTCCCAAAAAGAGGA...ATGTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCACCTGCCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR CCA 90 bp | GGCGGGCAGGTGGGCAGGTGGTCCTTTTCTGGTGTGCATACTTCTTTGGCAGACATCCATAGAGATGGCTaGGTCTGTGAAACTTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GGQVGRWSFSGVHTSLADIHRDG*VCETCG Trigger: ACCACAAGTTTCACAGACCCAGCCATCTCTATGGAT...GTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCACCTGCCCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR TCA 90 bp | CTGAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAAAAACTTGTGGTCATCTaGGATCGGCGGCCCCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: LSSRSARVYVRDTVSTPKKLVVI*DRRPLR Trigger: GCGAAGGGGCCGCCGATCTCAGATGACCACAAGTTT...TTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTCAG 52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR TCA 90 bp | GGCGAGACCTCTGAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAGATGGCTGGGTCTGTaGAACTTGTGGTCATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GETSELKVSQGVCKRYCLRWLGL*NLWSSE Trigger: CTCAGATGACCACAAGTTTCACAGACCCAGCCATCT...GAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTCAGAGGTCTCGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR GCA 90 bp | CTGAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAAAGATTCTCCCTCTGGTaGCTCCCATCCCCAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LSSRSARVYVRDTVSTPKRFSLW*LPSPRP Trigger: AGGCCTTGGGGATGGGAGGCACCAGAGGGAGAATCT...TTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR CCA 90 bp | GGCGAGACCTCTGAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCATCCCTGGAAGCTCATaGGCCAATCTGGGTATCACT | + |
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Preference number: 4 (lower is better) Translates to: GETSELKVSQGVCKRYCLIPGSS*ANLGIT Trigger: AGTGATACCCAGATTGGCCCATGAGCTTCCAGGGAT...GAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTCAGAGGTCTCGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR CCA 90 bp | GAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAAAGGCCCCGCTTGATCCCTaGAAGCTCATGGGCCAATCT | + |
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Preference number: 4 (lower is better) Translates to: ELKVSQGVCKRYCLNPKKAPLDP*KLMGQS Trigger: AGATTGGCCCATGAGCTTCCAGGGATCAAGCGGGGC...CTTTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR GCA 90 bp | CTGAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAAAGAAAAGAGCAGCTTTaGCTGCTCCAGGCAGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: LSSRSARVYVRDTVSTPKRKEQL*LLQAAA Trigger: CGCAGCTGCCTGGAGCAGGCAAAGCTGCTCTTTTCT...TTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR CCA 90 bp | TCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAAAGCACATGTAGATTCTCCCTCTaGTGCCTCCCATCCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SRSARVYVRDTVSTPKSTCRFSL*CLPSPR Trigger: CCTTGGGGATGGGAGGCACCAGAGGGAGAATCTACA...TGTGCTTTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR TCA 90 bp | CTGAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAAAGCCAGTGCTTGTCCTaGGGATCTGCTGCATACTTA | + |
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Preference number: 4 (lower is better) Translates to: LSSRSARVYVRDTVSTPKSQCLS*GSAAYL Trigger: TAAGTATGCAGCAGATCCTCAGGACAAGCACTGGCT...TTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| 3UTR CAA 72 bp | GTGGGCAGGTGGTCCTTTTCTGGTGTGCATACTTCTTaGGCAGACATTATAGCAGGCTCACTACCTGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: VGRWSFSGVHTS*ADIIAGSLPVF Trigger: AAACACAGGTAGTGAGCCTGCTATAATGTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR GCA 90 bp | GAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAAAGTCGCACATTCAGCGCTaGCTTCTGGAAGAACTTCAT | + |
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Preference number: 4 (lower is better) Translates to: ELKVSQGVCKRYCLNPKKSHIQR*LLEELH Trigger: ATGAAGTTCTTCCAGAAGGCAGCGCTGAATGTGCGA...CTTTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR TCA 90 bp | TTTATTGTTAACACCTATGCATTGTTTTGTGGACACACTCCATGGCATACAGTGAAACTTGTGGTCATCTaGGATCGGCGGCCCCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: FIVNTYALFCGHTPWHTVKLVVI*DRRPLR Trigger: GCGAAGGGGCCGCCGATCTCAGATGACCACAAGTTT...CACTGTATGCCATGGAGTGTGTCCACAAAACAATGCATAGGTGTTAACAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109326.10 |
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| CDS-3UTR TCA 90 bp | GAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAAAGGGATGTCTTCTTCAATaGGAAGGTACGCCATCTTTC | + |
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Preference number: 4 (lower is better) Translates to: ELKVSQGVCKRYCLNPKKGCLLQ*EGTPSF Trigger: GAAAGATGGCGTACCTTCTCATTGAAGAAGACATCC...CTTTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR GCA 90 bp | TTTTTATTGTTAACACCTATGCATTGTTTTGTGGACACACTCCATGGCATACAGCGGCGGCCCCTTCGCTaGACCTGCCGATGTTTTATC | + |
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Preference number: 4 (lower is better) Translates to: FLLLTPMHCFVDTLHGIQRRPLR*TCRCFI Trigger: GATAAAACATCGGCAGGTGCAGCGAAGGGGCCGCCG...CTGTATGCCATGGAGTGTGTCCACAAAACAATGCATAGGTGTTAACAATAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000109326.10 |
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| CDS-3UTR CCA 90 bp | GAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAAAGCTCAACCATCCAGGATaGCAGAACAAAGGATTTCAG | + |
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Preference number: 4 (lower is better) Translates to: ELKVSQGVCKRYCLNPKKLNHPG*QNKGFQ Trigger: CTGAAATCCTTTGTTCTGCCATCCTGGATGGTTGAG...CTTTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR CCA 90 bp | CTGAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAAGCCTTCTCGGCGAATTaGTTCACAGGATTTTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: LSSRSARVYVRDTVSTPKAFSAN*FTGFLF Trigger: AAACAAAAATCCTGTGAACCAATTCGCCGAGAAGGC...TTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR TCA 90 bp | CACTACAAACTAGCTCATGTACAGCTTAATGCTGTTAAGAGTCAACTAGACCAAAGAGGTGTGGGTGCTTaGTGTAGATTCTCCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: HYKLAHVQLNAVKSQLDQRGVGA*CRFSLW Trigger: CCAGAGGGAGAATCTACATCAAGCACCCACACCTCT...TTGGTCTAGTTGACTCTTAACAGCATTAAGCTGTACATGAGCTAGTTTGTAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR GCA 90 bp | CACTACAAACTAGCTCATGTACAGCTTAATGCTGTTAAGAGTCAACTAGACCAATTTGTTTCCATACCATaGCAGCAGCTGCGCGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: HYKLAHVQLNAVKSQLDQFVSIP*QQLRGH Trigger: ATGACCGCGCAGCTGCTGGCATGGTATGGAAACAAA...TTGGTCTAGTTGACTCTTAACAGCATTAAGCTGTACATGAGCTAGTTTGTAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS-3UTR CCA 90 bp | TCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAAAGCACAATACTTAAAGAGGTGTaGGTGCTTGATGTAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRSARVYVRDTVSTPKSTILKEV*VLDVDS Trigger: AGAATCTACATCAAGCACCCACACCTCTTTAAGTAT...TGTGCTTTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS-3UTR TCA 90 bp | ATTTTTATTGTTAACACCTATGCATTGTTTTGTGGACACACTCCATGGCATACAAGATGGCTGGGTCTGTaGAACTTGTGGTCATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IFIVNTYALFCGHTPWHTRWLGL*NLWSSE Trigger: CTCAGATGACCACAAGTTTCACAGACCCAGCCATCT...TGTATGCCATGGAGTGTGTCCACAAAACAATGCATAGGTGTTAACAATAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109326.10 |
||
| CDS-3UTR GCA 90 bp | TCTTTGGCAGACATTATAGCAGGCTCACTACCTGTGTTTATTACAAACTGTTTAGTCCTGAGGATCTGCTaGATACTTAAAGAGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLADIIAGSLPVFITNCLVLRIC*ILKEVW Trigger: CCACACCTCTTTAAGTATGCAGCAGATCCTCAGGAC...TAAACAGTTTGTAATAAACACAGGTAGTGAGCCTGCTATAATGTCTGCCAAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS-3UTR CCA 90 bp | TTTATTGTTAACACCTATGCATTGTTTTGTGGACACACTCCATGGCATACAGTGATCCATAGAGATGGCTaGGTCTGTGAAACTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FIVNTYALFCGHTPWHTVIHRDG*VCETCG Trigger: ACCACAAGTTTCACAGACCCAGCCATCTCTATGGAT...CACTGTATGCCATGGAGTGTGTCCACAAAACAATGCATAGGTGTTAACAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109326.10 |
||
| CDS-3UTR CCA 90 bp | TTTATTGTTAACACCTATGCATTGTTTTGTGGACACACTCCATGGCATACAGTGCGCTTAGCCATCTTCTaGTCCTGGAATATCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: FIVNTYALFCGHTPWHTVRLAIF*SWNIFM Trigger: CATGAAGATATTCCAGGACCAGAAGATGGCTAAGCG...CACTGTATGCCATGGAGTGTGTCCACAAAACAATGCATAGGTGTTAACAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109326.10 |
||
| CDS-3UTR TCA 90 bp | TTTTTATTGTTAACACCTATGCATTGTTTTGTGGACACACTCCATGGCATACAGTCTTCATGTACTTGTTaGAGACACCCTGGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLLLTPMHCFVDTLHGIQSSCTC*RHPGSP Trigger: AGGAGATCCAGGGTGTCTTCAACAAGTACATGAAGA...CTGTATGCCATGGAGTGTGTCCACAAAACAATGCATAGGTGTTAACAATAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109326.10 |
||
| CDS-3UTR GCA 90 bp | ATTTTTATTGTTAACACCTATGCATTGTTTTGTGGACACACTCCATGGCATACACCCCTTCGCTGCACCTaGCGATGTTTTATCATTATG | + |
|
Preference number: 4 (lower is better) Translates to: IFIVNTYALFCGHTPWHTPLRCT*RCFIIM Trigger: CATAATGATAAAACATCGGCAGGTGCAGCGAAGGGG...TGTATGCCATGGAGTGTGTCCACAAAACAATGCATAGGTGTTAACAATAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000109326.10 |
||
| CDS-3UTR CCA 90 bp | TCTTTGGCAGACATTATAGCAGGCTCACTACCTGTGTTTATTACAAACTGTTTATTCAGCGCTGCCTTCTaGAAGAACTTCATGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLADIIAGSLPVFITNCLFSAAF*KNFMYL Trigger: CAAGTACATGAAGTTCTTCCAGAAGGCAGCGCTGAA...TAAACAGTTTGTAATAAACACAGGTAGTGAGCCTGCTATAATGTCTGCCAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS-3UTR CCA 90 bp | TTTATTGTTAACACCTATGCATTGTTTTGTGGACACACTCCATGGCATACAGTGGCCATCTTCTGGTCCTaGAATATCTTCATGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FIVNTYALFCGHTPWHTVAIFWS*NIFMYL Trigger: CAAGTACATGAAGATATTCCAGGACCAGAAGATGGC...CACTGTATGCCATGGAGTGTGTCCACAAAACAATGCATAGGTGTTAACAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109326.10 |
||
| CDS CCA 90 bp | TGCCGATGTTTTATCATTATGTTCCAAGGGTTCGTGAGAACCGGCTaGCCCGCCGCGCCCGCGTCGCCCAGCTCCAGGCCACCTCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CRCFIIMFQGFVRTG*PAAPASPSSRPPRS Trigger: GGAGCGAGGTGGCCTGGAGCTGGGCGACGCGGGCGCGGCGGGCCAGCCGGTTCTCACGAACCCTTGGAACATAATGATAAAACATCGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017443.14 ENSMUST00000109326.10 ENSMUST00000109327.4 |
||
| CDS TCA 90 bp | TTCGCTGCACCTGCCGATGTTTTATCATTATGTTCCAAGGGTTCGTaGGAACCGGCTGGCCCGCCGCGCCCGCGTCGCCCAGCTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FAAPADVLSLCSKGS*EPAGPPRPRRPAPG Trigger: GCCTGGAGCTGGGCGACGCGGGCGCGGCGGGCCAGCCGGTTCTCACGAACCCTTGGAACATAATGATAAAACATCGGCAGGTGCAGCGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017443.14 ENSMUST00000109326.10 ENSMUST00000109327.4 |
||
| CDS-3UTR CAA 90 bp | ACAAGGCCAGGGCAGCCTGGCAGAGAACACAGATGGGGGCGGGTAGGCGGGCAGCCCTGGATCTCCTCATaGATGCTAGGCTGCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: TRPGQPGREHRWGRVGGQPWISS*MLGCRT Trigger: TGTCCTGCAGCCTAGCATCAATGAGGAGATCCAGGG...CTGCCCGCCTACCCGCCCCCATCTGTGTTCTCTGCCAGGCTGCCCTGGCCTTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS-3UTR CAA 90 bp | ACAAGGCCAGGGCAGCCTGGCAGAGAACACAGATGGGGGCGGGTAGGCGGGCAGCGACCTTTCCTCTTTTaGGGAATGGGGCTTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TRPGQPGREHRWGRVGGQRPFLF*GMGLPR Trigger: CCGAGGAAGCCCCATTCCCAAAAAGAGGAAAGGTCG...CTGCCCGCCTACCCGCCCCCATCTGTGTTCTCTGCCAGGCTGCCCTGGCCTTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS CCA 90 bp | TCCTCGGTGGGACTCCTCTTCTGCTTGCCGGCCCCGCTTGATCCCTaGAAGCTCATGGGCCAATCTGGGTATCACTTTCTCTCCATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSVGLLFCLPAPLDP*KLMGQSGYHFLSIR Trigger: TCTGATGGAGAGAAAGTGATACCCAGATTGGCCCATGAGCTTCCAGGGATCAAGCGGGGCCGGCAAGCAGAAGAGGAGTCCCACCGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
||
| CDS-3UTR CAA 90 bp | CGGGCAGGTGGGCAGGTGGTCCTTTTCTGGTGTGCATACTTCTTTGGCAGACATCCCATCCCCAAGGCCTaGTTGGCTCGAGACCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RAGGQVVLFWCAYFFGRHPIPKA*LARDPK Trigger: TTTGGGGTCTCGAGCCAACAAGGCCTTGGGGATGGG...ATGTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCACCTGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS GCA 90 bp | CCGGATGTCTTCTTCAATGAGAAGGTACGCCATCTTTCCGCCTGTTaGCCGCATGTGATGCTGCTCAGCCAGCCAGTGCTTGTCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PDVFFNEKVRHLSAC*PHVMLLSQPVLVLR Trigger: CCTCAGGACAAGCACTGGCTGGCTGAGCAGCATCACATGCGGGCAACAGGCGGAAAGATGGCGTACCTTCTCATTGAAGAAGACATCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS-3UTR CAA 90 bp | GGCGAGACCTCTGAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCCAGCTGCGCGGTCATTaGACAGGACGTGTCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GETSELKVSQGVCKRYCLQLRGH*TGRVQE Trigger: CTCCTGGACACGTCCTGTCAAATGACCGCGCAGCTG...GAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTCAGAGGTCTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS CCA 90 bp | GACTCCTCTTCTGCTTGCCGGCCCCGCTTGATCCCTGGAAGCTCATaGGCCAATCTGGGTATCACTTTCTCTCCATCAGAAAAGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DSSSACRPRLIPGSS*ANLGITFSPSEKSS Trigger: GCTGCTCTTTTCTGATGGAGAGAAAGTGATACCCAGATTGGCCCATGAGCTTCCAGGGATCAAGCGGGGCCGGCAAGCAGAAGAGGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
||
| CDS CCA 90 bp | TTCGGAAGACCTGGTCCTGAAGTCCTTGGGGCCTTCTCGGCGAATTaGTTCACAGGATTTTTGTTTCCATACCATGCCAGCAGCTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: FGRPGPEVLGAFSAN*FTGFLFPYHASSCA Trigger: CGCGCAGCTGCTGGCATGGTATGGAAACAAAAATCCTGTGAACCAATTCGCCGAGAAGGCCCCAAGGACTTCAGGACCAGGTCTTCCGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109327.4 |
||
| CDS GCA 90 bp | ATGTACTTGTTGAAGACACCCTGGATCTCCTCATTGATGCTAGGCTaGAGGACAGCACGGAGGAGATCCATAGAGATGGCTGGGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MYLLKTPWISSLMLG*RTARRRSIEMAGSV Trigger: CACAGACCCAGCCATCTCTATGGATCTCCTCCGTGCTGTCCTGCAGCCTAGCATCAATGAGGAGATCCAGGGTGTCTTCAACAAGTACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017443.14 ENSMUST00000109326.10 ENSMUST00000109327.4 |
||
| CDS CCA 90 bp | AGCGCTGCCTTCTGGAAGAACTTCATGTACTTGTTGAAGACACCCTaGATCTCCTCATTGATGCTAGGCTGCAGGACAGCACGGAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SAAFWKNFMYLLKTP*ISSLMLGCRTARRR Trigger: TCTCCTCCGTGCTGTCCTGCAGCCTAGCATCAATGAGGAGATCCAGGGTGTCTTCAACAAGTACATGAAGTTCTTCCAGAAGGCAGCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
||
| CDS-3UTR CAA 90 bp | CTGAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAACCATCTTTCCGCCTGTaGCCCGCATGTGATGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSRSARVYVRDTVSTPKPSFRL*PACDAA Trigger: AGCAGCATCACATGCGGGCAACAGGCGGAAAGATGG...TTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS TCA 90 bp | ACAGGATTTTTGTTTCCATACCATGCCAGCAGCTGCGCGGTCATTTaGCAGGACGTGTCCAGGAGGCCGACCTTTCCTCTTTTTGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TGFLFPYHASSCAVI*QDVSRRPTFPLFGN Trigger: ATTCCCAAAAAGAGGAAAGGTCGGCCTCCTGGACACGTCCTGTCAAATGACCGCGCAGCTGCTGGCATGGTATGGAAACAAAAATCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
||
| CDS-3UTR CAA 90 bp | CGGGCAGGTGGGCAGGTGGTCCTTTTCTGGTGTGCATACTTCTTTGGCAGACATAACTTCATGTACTTGTaGAAGACACCCTGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RAGGQVVLFWCAYFFGRHNFMYL*KTPWIS Trigger: GGAGATCCAGGGTGTCTTCAACAAGTACATGAAGTT...ATGTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCACCTGCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS-3UTR CAA 90 bp | CGGGCAGGTGGGCAGGTGGTCCTTTTCTGGTGTGCATACTTCTTTGGCAGACATTGGTTCACAGGATTTTaGTTTCCATACCATGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAGGQVVLFWCAYFFGRHWFTGF*FPYHAS Trigger: GCTGGCATGGTATGGAAACAAAAATCCTGTGAACCA...ATGTCTGCCAAAGAAGTATGCACACCAGAAAAGGACCACCTGCCCACCTGCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS-3UTR CAA 90 bp | GAGCTCAAGGTCAGCCAGGGTGTATGTAAGAGATACTGTCTCAACCCCAAAAAGGGCCTTCTCGGCGAATaGGTTCACAGGATTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ELKVSQGVCKRYCLNPKKGLLGE*VHRIFV Trigger: AACAAAAATCCTGTGAACCAATTCGCCGAGAAGGCC...CTTTTTGGGGTTGAGACAGTATCTCTTACATACACCCTGGCTGACCTTGAGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS-3UTR CAA 90 bp | ATTTTTATTGTTAACACCTATGCATTGTTTTGTGGACACACTCCATGGCATACACCCTGGATCTCCTCATaGATGCTAGGCTGCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: IFIVNTYALFCGHTPWHTPWISS*MLGCRT Trigger: TGTCCTGCAGCCTAGCATCAATGAGGAGATCCAGGG...TGTATGCCATGGAGTGTGTCCACAAAACAATGCATAGGTGTTAACAATAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109326.10 |
||
| CDS-3UTR CAA 90 bp | TTTATTGTTAACACCTATGCATTGTTTTGTGGACACACTCCATGGCATACAGTGATCTTCATGTACTTGTaGAAGACACCCTGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FIVNTYALFCGHTPWHTVIFMYL*KTPWIS Trigger: GGAGATCCAGGGTGTCTTCAACAAGTACATGAAGAT...CACTGTATGCCATGGAGTGTGTCCACAAAACAATGCATAGGTGTTAACAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109326.10 |
||
| CDS-3UTR CAA 90 bp | ATTTTTATTGTTAACACCTATGCATTGTTTTGTGGACACACTCCATGGCATACAAATATCTTCATGTACTaGTTGAAGACACCCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: IFIVNTYALFCGHTPWHTNIFMY*LKTPWI Trigger: GATCCAGGGTGTCTTCAACAAGTACATGAAGATATT...TGTATGCCATGGAGTGTGTCCACAAAACAATGCATAGGTGTTAACAATAAAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109326.10 |
||
| CDS CAA 72 bp | GGGAATGGGGCTTCCTCGGTGGGACTCCTCTTCTGCTaGCCGGCCCCGCTTGATCCCTGGAAGCTCATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GNGASSVGLLFC*PAPLDPWKLMG Trigger: GCCCATGAGCTTCCAGGGATCAAGCGGGGCCGGCAAGCAGAAGAGGAGTCCCACCGAGGAAGCCCCATTCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
||
| CDS CCA 72 bp | TTTATCATTATGTTCCAAGGGTTCGTGAGAACCGGCTaGCCCGCCGCGCCCGCGTCGCCCAGCTCCAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FIIMFQGFVRTG*PAAPASPSSRP Trigger: TGGCCTGGAGCTGGGCGACGCGGGCGCGGCGGGCCAGCCGGTTCTCACGAACCCTTGGAACATAATGATAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017443.14 ENSMUST00000109326.10 ENSMUST00000109327.4 |
||
| CDS TCA 72 bp | CCTGCCGATGTTTTATCATTATGTTCCAAGGGTTCGTaGGAACCGGCTGGCCCGCCGCGCCCGCGTCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PADVLSLCSKGS*EPAGPPRPRRP Trigger: TGGGCGACGCGGGCGCGGCGGGCCAGCCGGTTCTCACGAACCCTTGGAACATAATGATAAAACATCGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017443.14 ENSMUST00000109326.10 ENSMUST00000109327.4 |
||
| CDS CAA 72 bp | CCTCGGTGGGACTCCTCTTCTGCTTGCCGGCCCCGCTaGATCCCTGGAAGCTCATGGGCCAATCTGGGTATC | + |
|
Preference number: 6 (lower is better) Translates to: PRWDSSSACRPR*IPGSSWANLGI Trigger: GATACCCAGATTGGCCCATGAGCTTCCAGGGATCAAGCGGGGCCGGCAAGCAGAAGAGGAGTCCCACCGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
||
| CDS TCA 72 bp | CTCGGTGGGACTCCTCTTCTGCTTGCCGGCCCCGCTTaGTCCCTGGAAGCTCATGGGCCAATCTGGGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: LGGTPLLLAGPA*SLEAHGPIWVS Trigger: TGATACCCAGATTGGCCCATGAGCTTCCAGGGATCAAGCGGGGCCGGCAAGCAGAAGAGGAGTCCCACCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
||
| CDS GCA 72 bp | TTTGGGAATGGGGCTTCCTCGGTGGGACTCCTCTTCTaGTTGCCGGCCCCGCTTGATCCCTGGAAGCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: FGNGASSVGLLF*LPAPLDPWKLM Trigger: CATGAGCTTCCAGGGATCAAGCGGGGCCGGCAAGCAGAAGAGGAGTCCCACCGAGGAAGCCCCATTCCCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
||
| CDS CCA 72 bp | GGACTCCTCTTCTGCTTGCCGGCCCCGCTTGATCCCTaGAAGCTCATGGGCCAATCTGGGTATCACTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GLLFCLPAPLDP*KLMGQSGYHFL Trigger: GAGAAAGTGATACCCAGATTGGCCCATGAGCTTCCAGGGATCAAGCGGGGCCGGCAAGCAGAAGAGGAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
||
| CDS CAA 72 bp | GACAGGACGTGTCCAGGAGGCCGACCTTTCCTCTTTTaGGGAATGGGGCTTCCTCGGTGGGACTCCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: DRTCPGGRPFLF*GMGLPRWDSSS Trigger: AGAAGAGGAGTCCCACCGAGGAAGCCCCATTCCCAAAAAGAGGAAAGGTCGGCCTCCTGGACACGTCCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
||
| CDS TCA 72 bp | ATAGAGATGGCTGGGTCTGTGAAACTTGTGGTCATCTaGGATCGGCGGCCCCTTCGCTGCACCTGCCGATGT | + |
|
Preference number: 6 (lower is better) Translates to: IEMAGSVKLVVI*DRRPLRCTCRC Trigger: ACATCGGCAGGTGCAGCGAAGGGGCCGCCGATCTCAGATGACCACAAGTTTCACAGACCCAGCCATCTCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017443.14 ENSMUST00000109326.10 ENSMUST00000109327.4 |
||
| CDS TCA 72 bp | CATCGCTGGCAGCCAAGTCCCGGATGTCTTCTTCAATaGGAAGGTACGCCATCTTTCCGCCTGTTGCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: HRWQPSPGCLLQ*EGTPSFRLLPA Trigger: TGCGGGCAACAGGCGGAAAGATGGCGTACCTTCTCATTGAAGAAGACATCCGGGACTTGGCTGCCAGCGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS GCA 72 bp | CAGGCAGCTGCGGCAGGCCTCCTGAATCAACTGCTCTaGGTCCACTTCTTCCCCAACATTGTCTCGCACATT | + |
|
Preference number: 6 (lower is better) Translates to: QAAAAGLLNQLL*VHFFPNIVSHI Trigger: AATGTGCGAGACAATGTTGGGGAAGAAGTGGACGCAGAGCAGTTGATTCAGGAGGCCTGCCGCAGCTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
||
| CDS TCA 72 bp | TTGTTTCCATACCATGCCAGCAGCTGCGCGGTCATTTaGCAGGACGTGTCCAGGAGGCCGACCTTTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFPYHASSCAVI*QDVSRRPTFPL Trigger: AAGAGGAAAGGTCGGCCTCCTGGACACGTCCTGTCAAATGACCGCGCAGCTGCTGGCATGGTATGGAAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
||
| CDS CCA 72 bp | TCTGCTTGCCGGCCCCGCTTGATCCCTGGAAGCTCATaGGCCAATCTGGGTATCACTTTCTCTCCATCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SACRPRLIPGSS*ANLGITFSPSE Trigger: TTCTGATGGAGAGAAAGTGATACCCAGATTGGCCCATGAGCTTCCAGGGATCAAGCGGGGCCGGCAAGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
||
| CDS CCA 72 bp | CCGAGCTGGGTCCCACTTGGGGCCTTCTCGGCGAATTaGTTCACAGGATTTTTGTTTCCATACCATGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PSWVPLGAFSAN*FTGFLFPYHAS Trigger: GCTGGCATGGTATGGAAACAAAAATCCTGTGAACCAATTCGCCGAGAAGGCCCCAAGTGGGACCCAGCTCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS CAA 72 bp | TTTGTTTCCATACCATGCCAGCAGCTGCGCGGTCATTaGACAGGACGTGTCCAGGAGGCCGACCTTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FVSIPCQQLRGH*TGRVQEADLSS Trigger: AGAGGAAAGGTCGGCCTCCTGGACACGTCCTGTCAAATGACCGCGCAGCTGCTGGCATGGTATGGAAACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
||
| CDS CAA 72 bp | GCCGAGCTGGGTCCCACTTGGGGCCTTCTCGGCGAATaGGTTCACAGGATTTTTGTTTCCATACCATGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AELGPTWGLLGE*VHRIFVSIPCQ Trigger: CTGGCATGGTATGGAAACAAAAATCCTGTGAACCAATTCGCCGAGAAGGCCCCAAGTGGGACCCAGCTCGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS GCA 72 bp | TTCTTCAATGAGAAGGTACGCCATCTTTCCGCCTGTTaGCCGCATGTGATGCTGCTCAGCCAGCCAGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FFNEKVRHLSAC*PHVMLLSQPVL Trigger: AAGCACTGGCTGGCTGAGCAGCATCACATGCGGGCAACAGGCGGAAAGATGGCGTACCTTCTCATTGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
||
| CDS GCA 72 bp | TTGAAGACACCCTGGATCTCCTCATTGATGCTAGGCTaGAGGACAGCACGGAGGAGATCCATAGAGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: LKTPWISSLMLG*RTARRRSIEMA Trigger: AGCCATCTCTATGGATCTCCTCCGTGCTGTCCTGCAGCCTAGCATCAATGAGGAGATCCAGGGTGTCTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017443.14 ENSMUST00000109326.10 ENSMUST00000109327.4 |
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| CDS CCA 72 bp | CCTGGTCCTGAAGTCCTTGGGGCCTTCTCGGCGAATTaGTTCACAGGATTTTTGTTTCCATACCATGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PGPEVLGAFSAN*FTGFLFPYHAS Trigger: GCTGGCATGGTATGGAAACAAAAATCCTGTGAACCAATTCGCCGAGAAGGCCCCAAGGACTTCAGGACCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109327.4 |
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| CDS CAA 72 bp | CTTGGGGCCTTCTCGGCGAATTGGTTCACAGGATTTTaGTTTCCATACCATGCCAGCAGCTGCGCGGTCATT | + |
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Preference number: 6 (lower is better) Translates to: LGAFSANWFTGF*FPYHASSCAVI Trigger: AATGACCGCGCAGCTGCTGGCATGGTATGGAAACAAAAATCCTGTGAACCAATTCGCCGAGAAGGCCCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
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| CDS CAA 90 bp | CACAGGATTTTTGTTTCCATACCATGCCAGCAGCTGCGCGGTCATTaGACAGGACGTGTCCAGGAGGCCGACCTTTCCTCTTTTTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: HRIFVSIPCQQLRGH*TGRVQEADLSSFWE Trigger: TTCCCAAAAAGAGGAAAGGTCGGCCTCCTGGACACGTCCTGTCAAATGACCGCGCAGCTGCTGGCATGGTATGGAAACAAAAATCCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
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| CDS CCA 72 bp | CTTGTCCTGAGGATCTGCTGCATACTTAAAGAGGTGTaGGTGCTTGATGTAGATTCTCCCTCTGGTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LVLRICCILKEV*VLDVDSPSGAS Trigger: GGAGGCACCAGAGGGAGAATCTACATCAAGCACCCACACCTCTTTAAGTATGCAGCAGATCCTCAGGACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017443.14 |
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| CDS CAA 72 bp | TTCATGTACTTGTTGAAGACACCCTGGATCTCCTCATaGATGCTAGGCTGCAGGACAGCACGGAGGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: FMYLLKTPWISS*MLGCRTARRRS Trigger: GGATCTCCTCCGTGCTGTCCTGCAGCCTAGCATCAATGAGGAGATCCAGGGTGTCTTCAACAAGTACATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017443.14 ENSMUST00000109326.10 ENSMUST00000109327.4 |
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| CDS CAA 90 bp | TGGAAGAACTTCATGTACTTGTTGAAGACACCCTGGATCTCCTCATaGATGCTAGGCTGCAGGACAGCACGGAGGAGATCCATAGAGATG | + |
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Preference number: 6 (lower is better) Translates to: WKNFMYLLKTPWISS*MLGCRTARRRSIEM Trigger: CATCTCTATGGATCTCCTCCGTGCTGTCCTGCAGCCTAGCATCAATGAGGAGATCCAGGGTGTCTTCAACAAGTACATGAAGTTCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
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| CDS CAA 72 bp | TTCAGCGCTGCCTTCTGGAAGAACTTCATGTACTTGTaGAAGACACCCTGGATCTCCTCATTGATGCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: FSAAFWKNFMYL*KTPWISSLMLG Trigger: GCCTAGCATCAATGAGGAGATCCAGGGTGTCTTCAACAAGTACATGAAGTTCTTCCAGAAGGCAGCGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
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| CDS CCA 72 bp | TTCTGGAAGAACTTCATGTACTTGTTGAAGACACCCTaGATCTCCTCATTGATGCTAGGCTGCAGGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: FWKNFMYLLKTP*ISSLMLGCRTA Trigger: TGCTGTCCTGCAGCCTAGCATCAATGAGGAGATCCAGGGTGTCTTCAACAAGTACATGAAGTTCTTCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017443.14 ENSMUST00000109327.4 |
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| CDS CCA 72 bp | TTGGTGGGAAGGGCCTTCACTCGCTTAGCCATCTTCTaGTCCTGGAATATCTTCATGTACTTGTTGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: LVGRAFTRLAIF*SWNIFMYLLKT Trigger: TGTCTTCAACAAGTACATGAAGATATTCCAGGACCAGAAGATGGCTAAGCGAGTGAAGGCCCTTCCCACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109326.10 |
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