Pregenerated sensors for DNTT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025014Ensembl transcript IDs: ENSMUST00000051806.12, ENSMUST00000112200.3
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGGCAATACACAGAGATTCAGACACACAGGAGTCAGGTGGGCATTaGTGCGCTTCTCTAGATGATGCTGCAATGACAAGACCATTTTTA | + |
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Preference number: 1 (lower is better) Translates to: LAIHRDSDTQESGGH*CASLDDAAMTRPFL Trigger: TAAAAATGGTCTTGTCATTGCAGCATCATCTAGAGAAGCGCATCAATGCCCACCTGACTCCTGTGTGTCTGAATCTCTGTGTATTGCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| 3UTR TCA 90 bp | TTCAGACACACAGGAGTCAGGTGGGCATTGATGCGCTTCTCTAGATaGTGCTGCAATGACAAGACCATTTTTATTCAAACAAAGCAGACA | + |
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Preference number: 1 (lower is better) Translates to: FRHTGVRWALMRFSR*CCNDKTIFIQTKQT Trigger: TGTCTGCTTTGTTTGAATAAAAATGGTCTTGTCATTGCAGCATCATCTAGAGAAGCGCATCAATGCCCACCTGACTCCTGTGTGTCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| 3UTR GCA 90 bp | GAATGTGAACCATGGCTGCATCCTGGTTTATCAAGACTTCAAAGTTaGCTTAGAATATTCTCTCTGCATAGTATACTTATGATCCACTTG | + |
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Preference number: 1 (lower is better) Translates to: ECEPWLHPGLSRLQS*LRIFSLHSILMIHL Trigger: CAAGTGGATCATAAGTATACTATGCAGAGAGAATATTCTAAGGCAACTTTGAAGTCTTGATAAACCAGGATGCAGCCATGGTTCACATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| 3UTR-3UTR TCA 90 bp | GCTTCTCTAGATGATGCTGCAATGACAAGACCATTTTTATTCAAACAAAGCAGAGATGGCCCAAGAATGTaGACCATGGCTGCATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ASLDDAAMTRPFLFKQSRDGPRM*TMAASW Trigger: CCAGGATGCAGCCATGGTTCACATTCTTGGGCCATC...TCTGCTTTGTTTGAATAAAAATGGTCTTGTCATTGCAGCATCATCTAGAGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| 3UTR CAA 90 bp | AGTTGCCTTAGAATATTCTCTCTGCATAGTATACTTATGATCCACTaGCTGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: SCLRIFSLHSILMIH*LPASSEVKESQTFP Trigger: TGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAATATTCTAAGGCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| 3UTR-3UTR TCA 90 bp | CTATTTTTATTGGCAATACACAGAGATTCAGACACACAGGAGTCAGGTGGGCATTGCATAGTATACTTATaGTCCACTTGCTGCCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LFLLAIHRDSDTQESGGHCIVYL*STCCQH Trigger: ATGCTGGCAGCAAGTGGATCATAAGTATACTATGCA...ATGCCCACCTGACTCCTGTGTGTCTGAATCTCTGTGTATTGCCAATAAAAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGTTTCCTATTTTTATTGGCAATACACAGAGATTCAGACACACAGGAGTCAATGTGAACCATGGCTaGATCCTGGTTTATCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: LLFPIFIGNTQRFRHTGVNVNHG*ILVYQD Trigger: GTCTTGATAAACCAGGATGCAGCCATGGTTCACATT...GACTCCTGTGTGTCTGAATCTCTGTGTATTGCCAATAAAAATAGGAAACAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051806.12 |
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| 3UTR-3UTR CCA 90 bp | ATTCAAACAAAGCAGACAAAAGACTATGAATTCTATGCAACAGTAGGACAGATGACCATGGCTGCATCCTaGTTTATCAAGACTTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: IQTKQTKDYEFYATVGQMTMAAS*FIKTSK Trigger: CTTTGAAGTCTTGATAAACCAGGATGCAGCCATGGT...CATCTGTCCTACTGTTGCATAGAATTCATAGTCTTTTGTCTGCTTTGTTTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| 3UTR TCA 72 bp | GTTGCCTTAGAATATTCTCTCTGCATAGTATACTTATaGTCCACTTGCTGCCAGCATCCTCTGAGGTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: VALEYSLCIVYL*STCCQHPLRSK Trigger: CTTTGACCTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAATATTCTAAGGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| 3UTR TCA 72 bp | ACAGGAGTCAGGTGGGCATTGATGCGCTTCTCTAGATaGTGCTGCAATGACAAGACCATTTTTATTCAAACA | + |
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Preference number: 3 (lower is better) Translates to: TGVRWALMRFSR*CCNDKTIFIQT Trigger: TGTTTGAATAAAAATGGTCTTGTCATTGCAGCATCATCTAGAGAAGCGCATCAATGCCCACCTGACTCCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| 3UTR-3UTR CAA 90 bp | CATGGCTGCATCCTGGTTTATCAAGACTTCAAAGTTGCCTTAGAATATTCTCTCAACACAGAGCACAGCTaGTCTAAACCGAAAAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: HGCILVYQDFKVALEYSLNTEHS*SKPKRK Trigger: TTTTCTTTTCGGTTTAGACAAGCTGTGCTCTGTGTT...GAGAGAATATTCTAAGGCAACTTTGAAGTCTTGATAAACCAGGATGCAGCCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| 3UTR-3UTR CAA 90 bp | AACCATGGCTGCATCCTGGTTTATCAAGACTTCAAAGTTGCCTTAGAATATTCTAACACAGAGCACAGCTaGTCTAAACCGAAAAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: NHGCILVYQDFKVALEYSNTEHS*SKPKRK Trigger: TTTTCTTTTCGGTTTAGACAAGCTGTGCTCTGTGTT...AGAATATTCTAAGGCAACTTTGAAGTCTTGATAAACCAGGATGCAGCCATGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| 3UTR GCA 72 bp | CCATGGCTGCATCCTGGTTTATCAAGACTTCAAAGTTaGCTTAGAATATTCTCTCTGCATAGTATACTTATG | + |
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Preference number: 3 (lower is better) Translates to: PWLHPGLSRLQS*LRIFSLHSILM Trigger: CATAAGTATACTATGCAGAGAGAATATTCTAAGGCAACTTTGAAGTCTTGATAAACCAGGATGCAGCCATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | ATCCACTTGCTGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCAGGCGTGGAAGCCACTaGGGTGCCCAGCTGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: IHLLPASSEVKESQTFPSRRGSH*GAQLPG Trigger: CCCAGGCAGCTGGGCACCCCAGTGGCTTCCACGCCT...GCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCAGCAAGTGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR GCA 90 bp | ATCCACTTGCTGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCTGGAAGCCACTGGGGTaGCCAGCTGCCTGGGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: IHLLPASSEVKESQTFPSWKPLG*PAAWVF Trigger: AAAGACCCAGGCAGCTGGGCACCCCAGTGGCTTCCA...GCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCAGCAAGTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR GCA 90 bp | TTGCTGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCCATCTTCAGCCCTTTCCTTCCTaGTGGCCGCTCTTCTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLPASSEVKESQTFPSHLQPFPS*WPLFSL Trigger: CAGCGAGAAGAGCGGCCAGCAGGAAGGAAAGGGCTG...AAGATGGCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | TTGCTGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCCATCTTCCCTTTCCTTCCTGCTaGCCGCTCTTCTCGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LLPASSEVKESQTFPSHLPFPSC*PLFSLC Trigger: GCACAGCGAGAAGAGCGGCCAGCAGGAAGGAAAGGG...AAGATGGCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR GCA 90 bp | GCCCAAGAATGTGAACCATGGCTGCATCCTGGTTTATCAAGACTTCAAAGTTGCTGGAAGCCACTGGGGTaGCCAGCTGCCTGGGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: AQECEPWLHPGLSRLQSCWKPLG*PAAWVF Trigger: AAAGACCCAGGCAGCTGGGCACCCCAGTGGCTTCCA...GCAACTTTGAAGTCTTGATAAACCAGGATGCAGCCATGGTTCACATTCTTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR GCA 90 bp | ATCCACTTGCTGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCCTTCTTCACAGCAGGTaGTGGAACATTCTGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: IHLLPASSEVKESQTFPSLLHSR*WNILGA Trigger: GGCTCCCAGAATGTTCCAGCACCTGCTGTGAAGAAG...GCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCAGCAAGTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | TTGCTGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCCATCTTTCTTCCTCTCGTGTGTaGCATAGCGCCGCAAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LLPASSEVKESQTFPSHLSSSRV*HSAASL Trigger: GAGACTTGCGGCGCTATGCCACACACGAGAGGAAGA...AAGATGGCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR GCA 90 bp | TTCTCTCTGCATAGTATACTTATGATCCACTTGCTGCCAGCATCCTCTGAGGTCACTGGGGTGCCCAGCTaGCTGGGTCTTTTCTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: FSLHSILMIHLLPASSEVTGVPS*LGLFFR Trigger: TCGGAAGAAAAGACCCAGGCAGCTGGGCACCCCAGT...GACCTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | AACCATGGCTGCATCCTGGTTTATCAAGACTTCAAAGTTGCCTTAGAATATTCTAGGCGTGGAAGCCACTaGGGTGCCCAGCTGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NHGCILVYQDFKVALEYSRRGSH*GAQLPG Trigger: CCCAGGCAGCTGGGCACCCCAGTGGCTTCCACGCCT...AGAATATTCTAAGGCAACTTTGAAGTCTTGATAAACCAGGATGCAGCCATGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | TTCTCTCTGCATAGTATACTTATGATCCACTTGCTGCCAGCATCCTCTGAGGTCGGTGCTGGAACATTCTaGGAGCCTGGGACAGGACTC | + |
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Preference number: 4 (lower is better) Translates to: FSLHSILMIHLLPASSEVGAGTF*EPGTGL Trigger: GAGTCCTGTCCCAGGCTCCCAGAATGTTCCAGCACC...GACCTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR TCA 90 bp | TTCTCTCTGCATAGTATACTTATGATCCACTTGCTGCCAGCATCCTCTGAGGTCCAGAGGACGCTCGCATaGATGCCAGGCAAGAACCTT | + |
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Preference number: 4 (lower is better) Translates to: FSLHSILMIHLLPASSEVQRTLA*MPGKNL Trigger: AAGGTTCTTGCCTGGCATTCATGCGAGCGTCCTCTG...GACCTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR TCA 90 bp | GCCCAAGAATGTGAACCATGGCTGCATCCTGGTTTATCAAGACTTCAAAGTTGCCAGAGGACGCTCGCATaGATGCCAGGCAAGAACCTT | + |
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Preference number: 4 (lower is better) Translates to: AQECEPWLHPGLSRLQSCQRTLA*MPGKNL Trigger: AAGGTTCTTGCCTGGCATTCATGCGAGCGTCCTCTG...GCAACTTTGAAGTCTTGATAAACCAGGATGCAGCCATGGTTCACATTCTTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR TCA 90 bp | ATCCACTTGCTGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCTTTCCCATCCAAAGGTaGAATCGTGACAGTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: IHLLPASSEVKESQTFPSFPIQR*NRDSLP Trigger: GGGAAGACTGTCACGATTTCACCTTTGGATGGGAAA...GCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCAGCAAGTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051806.12 |
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| CDS-3UTR CCA 90 bp | CTATTTTTATTGGCAATACACAGAGATTCAGACACACAGGAGTCAGGTGGGCATCCCTTTCCTTCCTGCTaGCCGCTCTTCTCGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LFLLAIHRDSDTQESGGHPFPSC*PLFSLC Trigger: GCACAGCGAGAAGAGCGGCCAGCAGGAAGGAAAGGG...ATGCCCACCTGACTCCTGTGTGTCTGAATCTCTGTGTATTGCCAATAAAAATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR TCA 90 bp | CATGGCTGCATCCTGGTTTATCAAGACTTCAAAGTTGCCTTAGAATATTCTCTCGCTCGGAGCTGGCTTTaGTGTTCTGCAGCTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: HGCILVYQDFKVALEYSLARSWL*CSAAGA Trigger: GGCTCCAGCTGCAGAACATCAAAGCCAGCTCCGAGC...GAGAGAATATTCTAAGGCAACTTTGAAGTCTTGATAAACCAGGATGCAGCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR TCA 90 bp | TTGCTGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCCATCTTTCCTGCTGGGCTGCTTaGACTTTTCAAAGGTTGACT | + |
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Preference number: 4 (lower is better) Translates to: LLPASSEVKESQTFPSHLSCWAA*TFQRLT Trigger: AGTCAACCTTTGAAAAGTTCAAGCAGCCCAGCAGGA...AAGATGGCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR GCA 90 bp | CTATTTTTATTGGCAATACACAGAGATTCAGACACACAGGAGTCAGGTGGGCATACTGGGGTGCCCAGCTaGCTGGGTCTTTTCTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: LFLLAIHRDSDTQESGGHTGVPS*LGLFFR Trigger: TCGGAAGAAAAGACCCAGGCAGCTGGGCACCCCAGT...ATGCCCACCTGACTCCTGTGTGTCTGAATCTCTGTGTATTGCCAATAAAAATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR GCA 90 bp | ATCCACTTGCTGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCACCTTCCTGCTGGGCTaGTTGAACTTTTCAAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: IHLLPASSEVKESQTFPSTFLLG*LNFSKV Trigger: AACCTTTGAAAAGTTCAAGCAGCCCAGCAGGAAGGT...GCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCAGCAAGTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | AAAGACTATGAATTCTATGCAACAGTAGGACAGATGGCCCAAGAATGTGAACCAGGGTGCCCAGCTGCCTaGGTCTTTTCTTCCGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: KDYEFYATVGQMAQECEPGCPAA*VFSSED Trigger: GTCCTCGGAAGAAAAGACCCAGGCAGCTGGGCACCC...TGGTTCACATTCTTGGGCCATCTGTCCTACTGTTGCATAGAATTCATAGTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR TCA 90 bp | AACCATGGCTGCATCCTGGTTTATCAAGACTTCAAAGTTGCCTTAGAATATTCTGCTCGGAGCTGGCTTTaGTGTTCTGCAGCTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: NHGCILVYQDFKVALEYSARSWL*CSAAGA Trigger: GGCTCCAGCTGCAGAACATCAAAGCCAGCTCCGAGC...AGAATATTCTAAGGCAACTTTGAAGTCTTGATAAACCAGGATGCAGCCATGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR GCA 90 bp | ATATTCTCTCTGCATAGTATACTTATGATCCACTTGCTGCCAGCATCCTCTGAGCTGGCTTTGATGTTCTaGAGCTGGAGCCACTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: IFSLHSILMIHLLPASSELALMF*SWSHSR Trigger: CCTGGAGTGGCTCCAGCTGCAGAACATCAAAGCCAG...CTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | CTATTTTTATTGGCAATACACAGAGATTCAGACACACAGGAGTCAGGTGGGCATTCTTCCTCTCGTGTGTaGCATAGCGCCGCAAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LFLLAIHRDSDTQESGGHSSSRV*HSAASL Trigger: GAGACTTGCGGCGCTATGCCACACACGAGAGGAAGA...ATGCCCACCTGACTCCTGTGTGTCTGAATCTCTGTGTATTGCCAATAAAAATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR TCA 90 bp | ATCCACTTGCTGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCTCTTCTTTTCCAAAATaGAGAGGACCAAGTCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: IHLLPASSEVKESQTFPSSSFPK*RGPSLE Trigger: TTCGAGACTTGGTCCTCTTCATTTTGGAAAAGAAGA...GCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCAGCAAGTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR TCA 90 bp | AACCATGGCTGCATCCTGGTTTATCAAGACTTCAAAGTTGCCTTAGAATATTCTTTCGGGCCAGCTCCATaGGGAAGGCTCTTCGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: NHGCILVYQDFKVALEYSFGPAP*GRLFEL Trigger: CAACTCGAAGAGCCTTCCTCATGGAGCTGGCCCGAA...AGAATATTCTAAGGCAACTTTGAAGTCTTGATAAACCAGGATGCAGCCATGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR TCA 90 bp | CCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCCATCTTTTACTATGTCTTTCATGCTGGTaGTGGGGAATGGCAGAGATT | + |
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Preference number: 4 (lower is better) Translates to: PASSEVKESQTFPSHLLLCLSCW*WGMAEI Trigger: AATCTCTGCCATTCCCCATCACCAGCATGAAAGACA...TAGTAAAAGATGGCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | ACAAAAGACTATGAATTCTATGCAACAGTAGGACAGATGGCCCAAGAATGTGAAGGTGCTGGAACATTCTaGGAGCCTGGGACAGGACTC | + |
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Preference number: 4 (lower is better) Translates to: TKDYEFYATVGQMAQECEGAGTF*EPGTGL Trigger: GAGTCCTGTCCCAGGCTCCCAGAATGTTCCAGCACC...TTCACATTCTTGGGCCATCTGTCCTACTGTTGCATAGAATTCATAGTCTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | CCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCCATCTTTTACTAGCTGGTGATGGGGAATaGCAGAGATTTCAGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: PASSEVKESQTFPSHLLLAGDGE*QRFQYR Trigger: TCTGTACTGAAATCTCTGCCATTCCCCATCACCAGC...TAGTAAAAGATGGCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR TCA 90 bp | CAAAGTTGCCTTAGAATATTCTCTCTGCATAGTATACTTATGATCCACTTGCTGTTCGGGCCAGCTCCATaGGGAAGGCTCTTCGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: QSCLRIFSLHSILMIHLLFGPAP*GRLFEL Trigger: CAACTCGAAGAGCCTTCCTCATGGAGCTGGCCCGAA...CAGCAAGTGGATCATAAGTATACTATGCAGAGAGAATATTCTAAGGCAACTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR TCA 90 bp | TGCTTCTGTTTCCTATTTTTATTGGCAATACACAGAGATTCAGACACACAGGAGGCTCATTTTCCACCCTaGACCCTTTCCTTCGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: CFCFLFLLAIHRDSDTQEAHFPP*TLSFGP Trigger: TGGCCCGAAGGAAAGGGTTCAGGGTGGAAAATGAGC...CTCCTGTGTGTCTGAATCTCTGTGTATTGCCAATAAAAATAGGAAACAGAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051806.12 |
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| CDS-3UTR GCA 90 bp | ATTCAAACAAAGCAGACAAAAGACTATGAATTCTATGCAACAGTAGGACAGATGCAGCCCTTTCCTTCCTaGTGGCCGCTCTTCTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: IQTKQTKDYEFYATVGQMQPFPS*WPLFSL Trigger: CAGCGAGAAGAGCGGCCAGCAGGAAGGAAAGGGCTG...CATCTGTCCTACTGTTGCATAGAATTCATAGTCTTTTGTCTGCTTTGTTTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | ATCCACTTGCTGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCTGTAATTGTTTAATGTaGTTCTTCGCTGGCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IHLLPASSEVKESQTFPSCNCLM*FFAGKH Trigger: ATGCTTGCCAGCGAAGAACCACATTAAACAATTACA...GCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCAGCAAGTGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR TCA 90 bp | CTTCTGTTTCCTATTTTTATTGGCAATACACAGAGATTCAGACACACAGGAGTCCTCCCATGCATTCGATaGGCCAGGAGATGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFPIFIGNTQRFRHTGVLPCIR*ARRCPR Trigger: TCTTGGACATCTCCTGGCTCATCGAATGCATGGGAG...GACTCCTGTGTGTCTGAATCTCTGTGTATTGCCAATAAAAATAGGAAACAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051806.12 |
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| CDS-3UTR GCA 90 bp | ACAAAAGACTATGAATTCTATGCAACAGTAGGACAGATGGCCCAAGAATGTGAACTTCTTCACAGCAGGTaGTGGAACATTCTGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKDYEFYATVGQMAQECELLHSR*WNILGA Trigger: GGCTCCCAGAATGTTCCAGCACCTGCTGTGAAGAAG...TTCACATTCTTGGGCCATCTGTCCTACTGTTGCATAGAATTCATAGTCTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR GCA 90 bp | CTATTTTTATTGGCAATACACAGAGATTCAGACACACAGGAGTCAGGTGGGCATTTATGCAAGAGCTGCTaGTCTTCATCCTCTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFLLAIHRDSDTQESGGHLCKSC*SSSSVA Trigger: AGCCACAGAGGATGAAGAGCAGCAGCTCTTGCATAA...ATGCCCACCTGACTCCTGTGTGTCTGAATCTCTGTGTATTGCCAATAAAAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR GCA 90 bp | TGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCCATCTTTTACCTCTTCTTCACTTTCTaGTTCAAGAAACACCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CQHPLRSKNPRLSQAIFYLFFTF*FKKHPQ Trigger: TTGAGGGTGTTTCTTGAAGCAGAAAGTGAAGAAGAG...GTAAAAGATGGCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051806.12 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCCATCTTTTACCTCTTCTTCACTTTCTaGTTCAAGAAACACCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CQHPLRSKNPRLSQAIFYLFFTF*FKKHPL Trigger: AAGAGGGTGTTTCTTGAAGCAGAAAGTGAAGAAGAG...GTAAAAGATGGCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | AAAGACTATGAATTCTATGCAACAGTAGGACAGATGGCCCAAGAATGTGAACCATTCTCTGCCACAATGTaGGTGACCGAATCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KDYEFYATVGQMAQECEPFSATM*VTESLS Trigger: GCTCAGTGATTCGGTCACCCACATTGTGGCAGAGAA...TGGTTCACATTCTTGGGCCATCTGTCCTACTGTTGCATAGAATTCATAGTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCTGCATAGTATACTTATGATCCACTTGCTGCCAGCATCCTCTGAGGTCTCTTCTTTTCCAAAATaGAGAGGACCAAGTCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLHSILMIHLLPASSEVSSFPK*RGPSLE Trigger: TTCGAGACTTGGTCCTCTTCATTTTGGAAAAGAAGA...GACCTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGTTGCCTTAGAATATTCTCTCTGCATAGTATACTTATGATCCACTTGCTGCTCCCATGCATTCGATaGGCCAGGAGATGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSCLRIFSLHSILMIHLLLPCIR*ARRCPR Trigger: TCTTGGACATCTCCTGGCTCATCGAATGCATGGGAG...CAGCAAGTGGATCATAAGTATACTATGCAGAGAGAATATTCTAAGGCAACTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR TCA 90 bp | AGATGGCCCAAGAATGTGAACCATGGCTGCATCCTGGTTTATCAAGACTTCAAACCTCAGGCTTTTGTCTaGTTGTATTTTGCTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RWPKNVNHGCILVYQDFKPQAFV*LYFAES Trigger: ACTCTCAGCAAAATACAATCAGACAAAAGCCTGAGG...TTTGAAGTCTTGATAAACCAGGATGCAGCCATGGTTCACATTCTTGGGCCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR TCA 90 bp | CTAACACAGAGCACAGCTTGTCTAAACCGAAAAGAAAAATGTCAACAACTCCGTTCCTGCTGGGCTGCTTaGACTTTTCAAAGGTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LTQSTACLNRKEKCQQLRSCWAA*TFQRLT Trigger: AGTCAACCTTTGAAAAGTTCAAGCAGCCCAGCAGGA...ACGGAGTTGTTGACATTTTTCTTTTCGGTTTAGACAAGCTGTGCTCTGTGTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGACTATGAATTCTATGCAACAGTAGGACAGATGGCCCAAGAATGTGAAGGACGCTCGCATGAATaGCAGGCAAGAACCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: TKDYEFYATVGQMAQECEGRSHE*QARTFI Trigger: AATGAAGGTTCTTGCCTGGCATTCATGCGAGCGTCC...TTCACATTCTTGGGCCATCTGTCCTACTGTTGCATAGAATTCATAGTCTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR CCA 90 bp | ATATTCTCTCTGCATAGTATACTTATGATCCACTTGCTGCCAGCATCCTCTGAGATCAGGAAGCATTTCTaGAAATGGTCGAGAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: IFSLHSILMIHLLPASSEIRKHF*KWSRAS Trigger: GGATGCTCTCGACCATTTCCAGAAATGCTTCCTGAT...CTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR GCA 90 bp | CTATTTTTATTGGCAATACACAGAGATTCAGACACACAGGAGTCAGGTGGGCATAGGAATCCTGCTTTCTaGATTTGTGTAAACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLLAIHRDSDTQESGGHRNPAF*ICVNLR Trigger: CCTGAGGTTTACACAAATGCAGAAAGCAGGATTCCT...ATGCCCACCTGACTCCTGTGTGTCTGAATCTCTGTGTATTGCCAATAAAAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR GCA 90 bp | ATATTCTCTCTGCATAGTATACTTATGATCCACTTGCTGCCAGCATCCTCTGAGAGGAATCCTGCTTTCTaGATTTGTGTAAACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IFSLHSILMIHLLPASSERNPAF*ICVNLR Trigger: CCTGAGGTTTACACAAATGCAGAAAGCAGGATTCCT...CTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCTGCATAGTATACTTATGATCCACTTGCTGCCAGCATCCTCTGAGGTCGTAGTAGAGGAATCCTaGTTTCTGCATTTGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLHSILMIHLLPASSEVVVEES*FLHLCK Trigger: TTTACACAAATGCAGAAAGCAGGATTCCTCTACTAC...GACCTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | AAAGACTATGAATTCTATGCAACAGTAGGACAGATGGCCCAAGAATGTGAACCAGGCATTTCTTTCCCATaGTTCAATGTAGTCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KDYEFYATVGQMAQECEPGISFP*FNVVQS Trigger: GGACTGGACTACATTGAACCATGGGAAAGAAATGCC...TGGTTCACATTCTTGGGCCATCTGTCCTACTGTTGCATAGAATTCATAGTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR TCA 90 bp | GCTTCTCTAGATGATGCTGCAATGACAAGACCATTTTTATTCAAACAAAGCAGATGTCTTTCATGCTGGTaGTGGGGAATGGCAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: ASLDDAAMTRPFLFKQSRCLSCW*WGMAEI Trigger: AATCTCTGCCATTCCCCATCACCAGCATGAAAGACA...TCTGCTTTGTTTGAATAAAAATGGTCTTGTCATTGCAGCATCATCTAGAGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR TCA 90 bp | AAAGACTATGAATTCTATGCAACAGTAGGACAGATGGCCCAAGAATGTGAACCACCTCAGGCTTTTGTCTaGTTGTATTTTGCTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KDYEFYATVGQMAQECEPPQAFV*LYFAES Trigger: ACTCTCAGCAAAATACAATCAGACAAAAGCCTGAGG...TGGTTCACATTCTTGGGCCATCTGTCCTACTGTTGCATAGAATTCATAGTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR GCA 90 bp | ATTCAAACAAAGCAGACAAAAGACTATGAATTCTATGCAACAGTAGGACAGATGGGACGCTCGCATGAATaGCAGGCAAGAACCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: IQTKQTKDYEFYATVGQMGRSHE*QARTFI Trigger: AATGAAGGTTCTTGCCTGGCATTCATGCGAGCGTCC...CATCTGTCCTACTGTTGCATAGAATTCATAGTCTTTTGTCTGCTTTGTTTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR GCA 90 bp | CTAACACAGAGCACAGCTTGTCTAAACCGAAAAGAAAAATGTCAACAACTCCGTAAGTCTGTCACTTTATaGAAGAGCTGCTGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTQSTACLNRKEKCQQLRKSVTL*KSCCSS Trigger: TGAAGAGCAGCAGCTCTTGCATAAAGTGACAGACTT...ACGGAGTTGTTGACATTTTTCTTTTCGGTTTAGACAAGCTGTGCTCTGTGTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | ATTCAAACAAAGCAGACAAAAGACTATGAATTCTATGCAACAGTAGGACAGATGTTCTCTGCCACAATGTaGGTGACCGAATCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IQTKQTKDYEFYATVGQMFSATM*VTESLS Trigger: GCTCAGTGATTCGGTCACCCACATTGTGGCAGAGAA...CATCTGTCCTACTGTTGCATAGAATTCATAGTCTTTTGTCTGCTTTGTTTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | GCTTCTCTAGATGATGCTGCAATGACAAGACCATTTTTATTCAAACAAAGCAGAGCTGGTGATGGGGAATaGCAGAGATTTCAGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASLDDAAMTRPFLFKQSRAGDGE*QRFQYR Trigger: TCTGTACTGAAATCTCTGCCATTCCCCATCACCAGC...TCTGCTTTGTTTGAATAAAAATGGTCTTGTCATTGCAGCATCATCTAGAGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | CTTCTGTTTCCTATTTTTATTGGCAATACACAGAGATTCAGACACACAGGAGTCATCAGGAAGCATTTCTaGAAATGGTCGAGAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLFPIFIGNTQRFRHTGVIRKHF*KWSRAS Trigger: GGATGCTCTCGACCATTTCCAGAAATGCTTCCTGAT...GACTCCTGTGTGTCTGAATCTCTGTGTATTGCCAATAAAAATAGGAAACAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051806.12 |
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| CDS-3UTR CCA 90 bp | CTTCTGTTTCCTATTTTTATTGGCAATACACAGAGATTCAGACACACAGGAGTCGGCATTTCTTTCCCATaGTTCAATGTAGTCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLFPIFIGNTQRFRHTGVGISFP*FNVVQS Trigger: GGACTGGACTACATTGAACCATGGGAAAGAAATGCC...GACTCCTGTGTGTCTGAATCTCTGTGTATTGCCAATAAAAATAGGAAACAGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051806.12 |
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| CDS-3UTR GCA 90 bp | ATTCAAACAAAGCAGACAAAAGACTATGAATTCTATGCAACAGTAGGACAGATGTTATGCAAGAGCTGCTaGTCTTCATCCTCTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQTKQTKDYEFYATVGQMLCKSC*SSSSVA Trigger: AGCCACAGAGGATGAAGAGCAGCAGCTCTTGCATAA...CATCTGTCCTACTGTTGCATAGAATTCATAGTCTTTTGTCTGCTTTGTTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CCA 90 bp | ATATTCTCTCTGCATAGTATACTTATGATCCACTTGCTGCCAGCATCCTCTGAGTGTAATTGTTTAATGTaGTTCTTCGCTGGCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IFSLHSILMIHLLPASSECNCLM*FFAGKH Trigger: ATGCTTGCCAGCGAAGAACCACATTAAACAATTACA...CTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR GCA 90 bp | CATGGCTGCATCCTGGTTTATCAAGACTTCAAAGTTGCCTTAGAATATTCTCTCGTAGTAGAGGAATCCTaGTTTCTGCATTTGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: HGCILVYQDFKVALEYSLVVEES*FLHLCK Trigger: TTTACACAAATGCAGAAAGCAGGATTCCTCTACTAC...GAGAGAATATTCTAAGGCAACTTTGAAGTCTTGATAAACCAGGATGCAGCCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR GCA 90 bp | CAAAGTTGCCTTAGAATATTCTCTCTGCATAGTATACTTATGATCCACTTGCTGAAGTCTGTCACTTTATaGAAGAGCTGCTGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSCLRIFSLHSILMIHLLKSVTL*KSCCSS Trigger: TGAAGAGCAGCAGCTCTTGCATAAAGTGACAGACTT...CAGCAAGTGGATCATAAGTATACTATGCAGAGAGAATATTCTAAGGCAACTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR GCA 90 bp | ATTCAAACAAAGCAGACAAAAGACTATGAATTCTATGCAACAGTAGGACAGATGACCTTCCTGCTGGGCTaGTTGAACTTTTCAAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IQTKQTKDYEFYATVGQMTFLLG*LNFSKV Trigger: AACCTTTGAAAAGTTCAAGCAGCCCAGCAGGAAGGT...CATCTGTCCTACTGTTGCATAGAATTCATAGTCTTTTGTCTGCTTTGTTTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS TCA 90 bp | CGGTCCATCCAAGCAGGGCGAAGGCCCGGCGATCATAGGGGCACATaGCCAGATCTACACGGATGGCCTTCCAGCCCTTTCCTTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSIQAGRRPGDHRGT*PDLHGWPSSPFLPA Trigger: AGCAGGAAGGAAAGGGCTGGAAGGCCATCCGTGTAGATCTGGTCATGTGCCCCTATGATCGCCGGGCCTTCGCCCTGCTTGGATGGACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS CCA 90 bp | TCCTCTCGTGTGTGGCATAGCGCCGCAAGTCTCTCTCAAACTGTCTaGAGCCGGTCCATCCAAGCAGGGCGAAGGCCCGGCGATCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSRVWHSAASLSQTV*SRSIQAGRRPGDHR Trigger: CCTATGATCGCCGGGCCTTCGCCCTGCTTGGATGGACCGGCTCCAGACAGTTTGAGAGAGACTTGCGGCGCTATGCCACACACGAGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS GCA 90 bp | CACATGACCAGATCTACACGGATGGCCTTCCAGCCCTTTCCTTCCTaGTGGCCGCTCTTCTCGCTGTGCACTCTCCCGTGGTCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HMTRSTRMAFQPFPS*WPLFSLCTLPWSSF Trigger: GAAGCTGGACCACGGGAGAGTGCACAGCGAGAAGAGCGGCCAGCAGGAAGGAAAGGGCTGGAAGGCCATCCGTGTAGATCTGGTCATGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS GCA 90 bp | CCAAGTCTCGAAATCGGATGTCATAAGGCGTGGAAGCCACTGGGGTaGCCAGCTGCCTGGGTCTTTTCTTCCGAGGACCCAGGTGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: PSLEIGCHKAWKPLG*PAAWVFSSEDPGGL Trigger: CAGTCCACCTGGGTCCTCGGAAGAAAAGACCCAGGCAGCTGGGCACCCCAGTGGCTTCCACGCCTTATGACATCCGATTTCGAGACTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS CCA 90 bp | ATGACCAGATCTACACGGATGGCCTTCCAGCCCTTTCCTTCCTGCTaGCCGCTCTTCTCGCTGTGCACTCTCCCGTGGTCCAGCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: MTRSTRMAFQPFPSC*PLFSLCTLPWSSFR Trigger: TCTGAAGCTGGACCACGGGAGAGTGCACAGCGAGAAGAGCGGCCAGCAGGAAGGAAAGGGCTGGAAGGCCATCCGTGTAGATCTGGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS GCA 90 bp | ATGGCCTTCCAGCCCTTTCCTTCCTGCTGGCCGCTCTTCTCGCTGTaGACTCTCCCGTGGTCCAGCTTCAGAATCAGGAAGCATTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MAFQPFPSCWPLFSL*TLPWSSFRIRKHFW Trigger: CCAGAAATGCTTCCTGATTCTGAAGCTGGACCACGGGAGAGTGCACAGCGAGAAGAGCGGCCAGCAGGAAGGAAAGGGCTGGAAGGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS CCA 90 bp | ATGTCCAAGAGTTCGAGCTCGGAGCTGGCTTTGATGTTCTGCAGCTaGAGCCACTCCAGGACGTCTGACCCTGAGTTGTTCTCTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: MSKSSSSELALMFCS*SHSRTSDPELFSAT Trigger: TGTGGCAGAGAACAACTCAGGGTCAGACGTCCTGGAGTGGCTCCAGCTGCAGAACATCAAAGCCAGCTCCGAGCTCGAACTCTTGGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS CCA 90 bp | TCTTCGCTGGCAAGCATATTGGGAGATCTTCTTCACAGCAGGTGCTaGAACATTCTGGGAGCCTGGGACAGGACTCGGGGAGGAGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLASILGDLLHSRC*NILGAWDRTRGGVS Trigger: AGAAACTCCTCCCCGAGTCCTGTCCCAGGCTCCCAGAATGTTCCAGCACCTGCTGTGAAGAAGATCTCCCAATATGCTTGCCAGCGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS CCA 90 bp | CTGTGCACTCTCCCGTGGTCCAGCTTCAGAATCAGGAAGCATTTCTaGAAATGGTCGAGAGCATCCACCTTCCTGCTGGGCTGCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LCTLPWSSFRIRKHF*KWSRASTFLLGCLN Trigger: GTTCAAGCAGCCCAGCAGGAAGGTGGATGCTCTCGACCATTTCCAGAAATGCTTCCTGATTCTGAAGCTGGACCACGGGAGAGTGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS CCA 90 bp | TTGGGAGATCTTCTTCACAGCAGGTGCTGGAACATTCTGGGAGCCTaGGACAGGACTCGGGGAGGAGTTTCTATTCACAACAAGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGDLLHSRCWNILGA*DRTRGGVSIHNKLM Trigger: CATCAGCTTGTTGTGAATAGAAACTCCTCCCCGAGTCCTGTCCCAGGCTCCCAGAATGTTCCAGCACCTGCTGTGAAGAAGATCTCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS CCA 90 bp | GGAGTTTCTATTCACAACAAGCTGATGTCTCCCCATCATCTCCACTaGCTTCCCAGCTCCCATGCATTCGATGAGCCAGGAGATGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GVSIHNKLMSPHHLH*LPSSHAFDEPGDVQ Trigger: TTGGACATCTCCTGGCTCATCGAATGCATGGGAGCTGGGAAGCCAGTGGAGATGATGGGGAGACATCAGCTTGTTGTGAATAGAAACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS CCA 90 bp | CAAGCATATTGGGAGATCTTCTTCACAGCAGGTGCTGGAACATTCTaGGAGCCTGGGACAGGACTCGGGGAGGAGTTTCTATTCACAACA | + |
|
Preference number: 5 (lower is better) Translates to: QAYWEIFFTAGAGTF*EPGTGLGEEFLFTT Trigger: TGTTGTGAATAGAAACTCCTCCCCGAGTCCTGTCCCAGGCTCCCAGAATGTTCCAGCACCTGCTGTGAAGAAGATCTCCCAATATGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CCA 90 bp | ACTCTCCCGTGGTCCAGCTTCAGAATCAGGAAGCATTTCTGGAAATaGTCGAGAGCATCCACCTTCCTGCTGGGCTGCTTGAACTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLPWSSFRIRKHFWK*SRASTFLLGCLNFS Trigger: TGAAAAGTTCAAGCAGCCCAGCAGGAAGGTGGATGCTCTCGACCATTTCCAGAAATGCTTCCTGATTCTGAAGCTGGACCACGGGAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS GCA 90 bp | AGCAACCCCTGCTGCTTCCAAAAGTCTGTCACTTTATGCAAGAGCTaGTGCTCTTCATCCTCTGTGGCTTCTGGGCTGGTAATTAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SNPCCFQKSVTLCKS*CSSSSVASGLVIRK Trigger: CTTTCTAATTACCAGCCCAGAAGCCACAGAGGATGAAGAGCAGCAGCTCTTGCATAAAGTGACAGACTTTTGGAAGCAGCAGGGGTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS GCA 90 bp | GATGGGGAATGGCAGAGATTTCAGTACAGAGGACGCTCGCATGAATaGCAGGCAAGAACCTTCATTCTCTCTAAGCTCATCATTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DGEWQRFQYRGRSHE*QARTFILSKLIIFS Trigger: GCTGAAAATGATGAGCTTAGAGAGAATGAAGGTTCTTGCCTGGCATTCATGCGAGCGTCCTCTGTACTGAAATCTCTGCCATTCCCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS GCA 90 bp | AACCCCTGCTGCTTCCAAAAGTCTGTCACTTTATGCAAGAGCTGCTaGTCTTCATCCTCTGTGGCTTCTGGGCTGGTAATTAGAAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NPCCFQKSVTLCKSC*SSSSVASGLVIRKS Trigger: AGACTTTCTAATTACCAGCCCAGAAGCCACAGAGGATGAAGAGCAGCAGCTCTTGCATAAAGTGACAGACTTTTGGAAGCAGCAGGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CAA 90 bp | AGATGGCCCAAGAATGTGAACCATGGCTGCATCCTGGTTTATCAAGACTTCAAATCATACAGGGCGTGGTaGTCCAGCATCATCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RWPKNVNHGCILVYQDFKSYRAW*SSIIFL Trigger: GAGGAAGATGATGCTGGACAACCACGCCCTGTATGA...TTTGAAGTCTTGATAAACCAGGATGCAGCCATGGTTCACATTCTTGGGCCATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS GCA 90 bp | AAGCATTTCTGGAAATGGTCGAGAGCATCCACCTTCCTGCTGGGCTaGTTGAACTTTTCAAAGGTTGACTCTAAGATGTCGCAGTACAAA | + |
|
Preference number: 5 (lower is better) Translates to: KHFWKWSRASTFLLG*LNFSKVDSKMSQYK Trigger: TTTGTACTGCGACATCTTAGAGTCAACCTTTGAAAAGTTCAAGCAGCCCAGCAGGAAGGTGGATGCTCTCGACCATTTCCAGAAATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CAA 90 bp | TGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCCATCTTTTACTCCTGCTTTCTGCATTaGTGTAAACCTCAGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CQHPLRSKNPRLSQAIFYSCFLH*CKPQAF Trigger: AAAAGCCTGAGGTTTACACAAATGCAGAAAGCAGGA...GTAAAAGATGGCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR CAA 90 bp | CATGGCTGCATCCTGGTTTATCAAGACTTCAAAGTTGCCTTAGAATATTCTCTCTCATACAGGGCGTGGTaGTCCAGCATCATCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HGCILVYQDFKVALEYSLSYRAW*SSIIFL Trigger: GAGGAAGATGATGCTGGACAACCACGCCCTGTATGA...GAGAGAATATTCTAAGGCAACTTTGAAGTCTTGATAAACCAGGATGCAGCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTCTCTGCATAGTATACTTATGATCCACTTGCTGCCAGCATCCTCTGAGATGATACTCTTCACCTaGTCCCCTAGGCAAGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: IFSLHSILMIHLLPASSEMILFT*SPRQGI Trigger: GATTCCTTGCCTAGGGGACAAGGTGAAGAGTATCAT...CTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR CAA 90 bp | TTGCTGCCAGCATCCTCTGAGGTCAAAGAATCCCAGACTTTCCCAAGCCATCTTACAGAGGTAAAGAGTTaGAAGGATTTATATCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLPASSEVKESQTFPSHLTEVKS*KDLYRS Trigger: TGAGCGATATAAATCCTTCAAACTCTTTACCTCTGT...AAGATGGCTTGGGAAAGTCTGGGATTCTTTGACCTCAGAGGATGCTGGCAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCTGCATAGTATACTTATGATCCACTTGCTGCCAGCATCCTCTGAGGTCTCCTGCTTTCTGCATTaGTGTAAACCTCAGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FSLHSILMIHLLPASSEVSCFLH*CKPQAF Trigger: AAAAGCCTGAGGTTTACACAAATGCAGAAAGCAGGA...GACCTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTCTCTGCATAGTATACTTATGATCCACTTGCTGCCAGCATCCTCTGAGTTCCTGCTGGGCTGCTaGAACTTTTCAAAGGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: IFSLHSILMIHLLPASSEFLLGC*NFSKVD Trigger: GTCAACCTTTGAAAAGTTCAAGCAGCCCAGCAGGAA...CTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS-3UTR CAA 90 bp | GCCCAAGAATGTGAACCATGGCTGCATCCTGGTTTATCAAGACTTCAAAGTTGCAGGCTTTCTGTAGTTTaGACACTTTCCCATCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AQECEPWLHPGLSRLQSCRLSVV*TLSHPK Trigger: CTTTGGATGGGAAAGTGTCAAAACTACAGAAAGCCT...GCAACTTTGAAGTCTTGATAAACCAGGATGCAGCCATGGTTCACATTCTTGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051806.12 |
||
| CDS-3UTR CAA 90 bp | CTAACACAGAGCACAGCTTGTCTAAACCGAAAAGAAAAATGTCAACAACTCCGTTTCCTGCTGGGCTGCTaGAACTTTTCAAAGGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LTQSTACLNRKEKCQQLRFLLGC*NFSKVD Trigger: GTCAACCTTTGAAAAGTTCAAGCAGCCCAGCAGGAA...ACGGAGTTGTTGACATTTTTCTTTTCGGTTTAGACAAGCTGTGCTCTGTGTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS TCA 90 bp | GAGGAATCCTGCTTTCTGCATTTGTGTAAACCTCAGGCTTTTGTCTaGTTGTATTTTGCTGAGAGTTCTGAAACCCATCCTGAACCATTT | + |
|
Preference number: 5 (lower is better) Translates to: EESCFLHLCKPQAFV*LYFAESSETHPEPF Trigger: AAATGGTTCAGGATGGGTTTCAGAACTCTCAGCAAAATACAATCAGACAAAAGCCTGAGGTTTACACAAATGCAGAAAGCAGGATTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGTTGCCTTAGAATATTCTCTCTGCATAGTATACTTATGATCCACTTGCTGATGATACTCTTCACCTaGTCCCCTAGGCAAGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: QSCLRIFSLHSILMIHLLMILFT*SPRQGI Trigger: GATTCCTTGCCTAGGGGACAAGGTGAAGAGTATCAT...CAGCAAGTGGATCATAAGTATACTATGCAGAGAGAATATTCTAAGGCAACTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR CAA 90 bp | ATATTCTCTCTGCATAGTATACTTATGATCCACTTGCTGCCAGCATCCTCTGAGTTGTCTGATTGTATTTaGCTGAGAGTTCTGAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: IFSLHSILMIHLLPASSELSDCI*LRVLKP Trigger: GGGTTTCAGAACTCTCAGCAAAATACAATCAGACAA...CTCAGAGGATGCTGGCAGCAAGTGGATCATAAGTATACTATGCAGAGAGAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR CAA 90 bp | CTAACACAGAGCACAGCTTGTCTAAACCGAAAAGAAAAATGTCAACAACTCCGTGTAAACCTCAGGCTTTaGTCTGATTGTATTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LTQSTACLNRKEKCQQLRVNLRL*SDCILL Trigger: CAGCAAAATACAATCAGACAAAAGCCTGAGGTTTAC...ACGGAGTTGTTGACATTTTTCTTTTCGGTTTAGACAAGCTGTGCTCTGTGTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR CAA 90 bp | CTAACACAGAGCACAGCTTGTCTAAACCGAAAAGAAAAATGTCAACAACTCCGTACAGAGGTAAAGAGTTaGAAGGATTTATATCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTQSTACLNRKEKCQQLRTEVKS*KDLYRS Trigger: TGAGCGATATAAATCCTTCAAACTCTTTACCTCTGT...ACGGAGTTGTTGACATTTTTCTTTTCGGTTTAGACAAGCTGTGCTCTGTGTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGTTGCCTTAGAATATTCTCTCTGCATAGTATACTTATGATCCACTTGCTGGTAAACCTCAGGCTTTaGTCTGATTGTATTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSCLRIFSLHSILMIHLLVNLRL*SDCILL Trigger: CAGCAAAATACAATCAGACAAAAGCCTGAGGTTTAC...CAGCAAGTGGATCATAAGTATACTATGCAGAGAGAATATTCTAAGGCAACTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CCA 72 bp | GTGTGGCATAGCGCCGCAAGTCTCTCTCAAACTGTCTaGAGCCGGTCCATCCAAGCAGGGCGAAGGCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: VWHSAASLSQTV*SRSIQAGRRPG Trigger: GCCGGGCCTTCGCCCTGCTTGGATGGACCGGCTCCAGACAGTTTGAGAGAGACTTGCGGCGCTATGCCACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CCA 72 bp | TCTACACGGATGGCCTTCCAGCCCTTTCCTTCCTGCTaGCCGCTCTTCTCGCTGTGCACTCTCCCGTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: STRMAFQPFPSC*PLFSLCTLPWS Trigger: GGACCACGGGAGAGTGCACAGCGAGAAGAGCGGCCAGCAGGAAGGAAAGGGCTGGAAGGCCATCCGTGTAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS TCA 72 bp | CAAGCAGGGCGAAGGCCCGGCGATCATAGGGGCACATaGCCAGATCTACACGGATGGCCTTCCAGCCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: QAGRRPGDHRGT*PDLHGWPSSPF Trigger: GAAAGGGCTGGAAGGCCATCCGTGTAGATCTGGTCATGTGCCCCTATGATCGCCGGGCCTTCGCCCTGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS GCA 72 bp | CAGCCCTTTCCTTCCTGCTGGCCGCTCTTCTCGCTGTaGACTCTCCCGTGGTCCAGCTTCAGAATCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QPFPSCWPLFSL*TLPWSSFRIRK Trigger: CTTCCTGATTCTGAAGCTGGACCACGGGAGAGTGCACAGCGAGAAGAGCGGCCAGCAGGAAGGAAAGGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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| CDS CAA 90 bp | TCGATGAGCCAGGAGATGTCCAAGAGTTCGAGCTCGGAGCTGGCTTaGATGTTCTGCAGCTGGAGCCACTCCAGGACGTCTGACCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SMSQEMSKSSSSELA*MFCSWSHSRTSDPE Trigger: CTCAGGGTCAGACGTCCTGGAGTGGCTCCAGCTGCAGAACATCAAAGCCAGCTCCGAGCTCGAACTCTTGGACATCTCCTGGCTCATCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS GCA 72 bp | GAAATCGGATGTCATAAGGCGTGGAAGCCACTGGGGTaGCCAGCTGCCTGGGTCTTTTCTTCCGAGGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: EIGCHKAWKPLG*PAAWVFSSEDP Trigger: TGGGTCCTCGGAAGAAAAGACCCAGGCAGCTGGGCACCCCAGTGGCTTCCACGCCTTATGACATCCGATTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS GCA 72 bp | TCCAAGAGTTCGAGCTCGGAGCTGGCTTTGATGTTCTaGAGCTGGAGCCACTCCAGGACGTCTGACCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SKSSSSELALMF*SWSHSRTSDPE Trigger: CTCAGGGTCAGACGTCCTGGAGTGGCTCCAGCTGCAGAACATCAAAGCCAGCTCCGAGCTCGAACTCTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS TCA 72 bp | AGGAGATGTCCAAGAGTTCGAGCTCGGAGCTGGCTTTaGTGTTCTGCAGCTGGAGCCACTCCAGGACGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRCPRVRARSWL*CSAAGATPGRL Trigger: CAGACGTCCTGGAGTGGCTCCAGCTGCAGAACATCAAAGCCAGCTCCGAGCTCGAACTCTTGGACATCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CCA 72 bp | AGTTCGAGCTCGGAGCTGGCTTTGATGTTCTGCAGCTaGAGCCACTCCAGGACGTCTGACCCTGAGTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSELALMFCS*SHSRTSDPELF Trigger: GAACAACTCAGGGTCAGACGTCCTGGAGTGGCTCCAGCTGCAGAACATCAAAGCCAGCTCCGAGCTCGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CAA 72 bp | CAGGAGATGTCCAAGAGTTCGAGCTCGGAGCTGGCTTaGATGTTCTGCAGCTGGAGCCACTCCAGGACGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QEMSKSSSSELA*MFCSWSHSRTS Trigger: AGACGTCCTGGAGTGGCTCCAGCTGCAGAACATCAAAGCCAGCTCCGAGCTCGAACTCTTGGACATCTCCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CCA 72 bp | TGGGAGATCTTCTTCACAGCAGGTGCTGGAACATTCTaGGAGCCTGGGACAGGACTCGGGGAGGAGTTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: WEIFFTAGAGTF*EPGTGLGEEFL Trigger: TAGAAACTCCTCCCCGAGTCCTGTCCCAGGCTCCCAGAATGTTCCAGCACCTGCTGTGAAGAAGATCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CCA 72 bp | GCAAGCATATTGGGAGATCTTCTTCACAGCAGGTGCTaGAACATTCTGGGAGCCTGGGACAGGACTCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ASILGDLLHSRC*NILGAWDRTRG Trigger: TCCCCGAGTCCTGTCCCAGGCTCCCAGAATGTTCCAGCACCTGCTGTGAAGAAGATCTCCCAATATGCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CCA 72 bp | TCCTGCTGGCCGCTCTTCTCGCTGTGCACTCTCCCGTaGTCCAGCTTCAGAATCAGGAAGCATTTCTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SCWPLFSLCTLP*SSFRIRKHFWK Trigger: TTTCCAGAAATGCTTCCTGATTCTGAAGCTGGACCACGGGAGAGTGCACAGCGAGAAGAGCGGCCAGCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CCA 72 bp | CTTCTTCACAGCAGGTGCTGGAACATTCTGGGAGCCTaGGACAGGACTCGGGGAGGAGTTTCTATTCACAAC | + |
|
Preference number: 6 (lower is better) Translates to: LLHSRCWNILGA*DRTRGGVSIHN Trigger: GTTGTGAATAGAAACTCCTCCCCGAGTCCTGTCCCAGGCTCCCAGAATGTTCCAGCACCTGCTGTGAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CCA 72 bp | GTGACAGTCTTCCCCTTAGTCCTGTCATACAGGGCGTaGTTGTCCAGCATCATCTTCCTCTCGTGTGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VTVFPLVLSYRA*LSSIIFLSCVA Trigger: TGCCACACACGAGAGGAAGATGATGCTGGACAACCACGCCCTGTATGACAGGACTAAGGGGAAGACTGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051806.12 |
||
| CDS TCA 72 bp | ACAGGACTCGGGGAGGAGTTTCTATTCACAACAAGCTaGTGTCTCCCCATCATCTCCACTGGCTTCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TGLGEEFLFTTS*CLPIISTGFPA Trigger: AGCTGGGAAGCCAGTGGAGATGATGGGGAGACATCAGCTTGTTGTGAATAGAAACTCCTCCCCGAGTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CCA 72 bp | AGGACGTCTGACCCTGAGTTGTTCTCTGCCACAATGTaGGTGACCGAATCACTGAGCTCATTTTCCACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RTSDPELFSATM*VTESLSSFSTL Trigger: CAGGGTGGAAAATGAGCTCAGTGATTCGGTCACCCACATTGTGGCAGAGAACAACTCAGGGTCAGACGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CCA 72 bp | ATTCACAACAAGCTGATGTCTCCCCATCATCTCCACTaGCTTCCCAGCTCCCATGCATTCGATGAGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: IHNKLMSPHHLH*LPSSHAFDEPG Trigger: TCCTGGCTCATCGAATGCATGGGAGCTGGGAAGCCAGTGGAGATGATGGGGAGACATCAGCTTGTTGTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CCA 72 bp | TCAAGAAACACCCTCTTAGTCCTGTCATACAGGGCGTaGTTGTCCAGCATCATCTTCCTCTCGTGTGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SRNTLLVLSYRA*LSSIIFLSCVA Trigger: TGCCACACACGAGAGGAAGATGATGCTGGACAACCACGCCCTGTATGACAGGACTAAGAGGGTGTTTCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112200.3 |
||
| CDS CCA 72 bp | AATCCCCTCTGTGTCTTTCATGCTGGTGATGGGGAATaGCAGAGATTTCAGTACAGAGGACGCTCGCATGAA | + |
|
Preference number: 6 (lower is better) Translates to: NPLCVFHAGDGE*QRFQYRGRSHE Trigger: TTCATGCGAGCGTCCTCTGTACTGAAATCTCTGCCATTCCCCATCACCAGCATGAAAGACACAGAGGGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS GCA 72 bp | TGGCAGAGATTTCAGTACAGAGGACGCTCGCATGAATaGCAGGCAAGAACCTTCATTCTCTCTAAGCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: WQRFQYRGRSHE*QARTFILSKLI Trigger: GATGAGCTTAGAGAGAATGAAGGTTCTTGCCTGGCATTCATGCGAGCGTCCTCTGTACTGAAATCTCTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CAA 72 bp | CCATCTTCAATAATTCCCTCTATGATACTCTTCACCTaGTCCCCTAGGCAAGGAATCCCCTCTGTGTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSSIIPSMILFT*SPRQGIPSVSF Trigger: GAAAGACACAGAGGGGATTCCTTGCCTAGGGGACAAGGTGAAGAGTATCATAGAGGGAATTATTGAAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS TCA 72 bp | AGGCTCTTCGAGTTGTTCCCATCTTCTTTTCCAAAATaGAGAGGACCAAGTCTCGAAATCGGATGTCATAAG | + |
|
Preference number: 6 (lower is better) Translates to: RLFELFPSSFPK*RGPSLEIGCHK Trigger: CTTATGACATCCGATTTCGAGACTTGGTCCTCTTCATTTTGGAAAAGAAGATGGGAACAACTCGAAGAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
||
| CDS CAA 90 bp | TTCTCAGCTGTCTTCAGTCCCACACCAAACACAGAGGTAAAGAGTTaGAAGGATTTATATCGCTCATCATTTAACACAGCTTTAGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FSAVFSPTPNTEVKS*KDLYRSSFNTALAS Trigger: TGAAGCTAAAGCTGTGTTAAATGATGAGCGATATAAATCCTTCAAACTCTTTACCTCTGTGTTTGGTGTGGGACTGAAGACAGCTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051806.12 ENSMUST00000112200.3 |
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