Pregenerated sensors for DNMT3C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000082079Ensembl transcript IDs: ENSMUST00000119996.3
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACAGGCAAAGTGGTCCTTCAAGGGGGCAAACAGGTGTCTGATGACTaGCACACTCCAAGACCTGCCCAGCAGCTTCTGACGGGCGCCACG | + |
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Preference number: 5 (lower is better) Translates to: TGKVVLQGGKQVSDD*HTPRPAQQLLTGAT Trigger: CGTGGCGCCCGTCAGAAGCTGCTGGGCAGGTCTTGGAGTGTGCCAGTCATCAGACACCTGTTTGCCCCCTTGAAGGACCACTTTGCCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS TCA 90 bp | TCTCCTCATCCTCCCCTCGGTCCTTCCCGCCATAGCTATTTGTCTTaGGGCGCTTGGGTGGGGAGGACTCAGAAGCAGCAGGGTCATTGG | + |
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Preference number: 5 (lower is better) Translates to: SPHPPLGPSRHSYLS*GAWVGRTQKQQGHW Trigger: CCAATGACCCTGCTGCTTCTGAGTCCTCCCCACCCAAGCGCCTCAAGACAAATAGCTATGGCGGGAAGGACCGAGGGGAGGATGAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CCA 90 bp | CCCTCGGTCCTTCCCGCCATAGCTATTTGTCTTGAGGCGCTTGGGTaGGGAGGACTCAGAAGCAGCAGGGTCATTGGTTGTGCGTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: PSVLPAIAICLEALG*GGLRSSRVIGCASS Trigger: CGAAGACGCACAACCAATGACCCTGCTGCTTCTGAGTCCTCCCCACCCAAGCGCCTCAAGACAAATAGCTATGGCGGGAAGGACCGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CCA 90 bp | TCCAAGACCTGCCCAGCAGCTTCTGACGGGCGCCACGGCCCATGTTaGACACGTCTGTGTAGTGTTCAGGAAAGCCGAAGATCCTTTCGA | + |
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Preference number: 5 (lower is better) Translates to: SKTCPAASDGRHGPC*TRLCSVQESRRSFR Trigger: TCGAAAGGATCTTCGGCTTTCCTGAACACTACACAGACGTGTCCAACATGGGCCGTGGCGCCCGTCAGAAGCTGCTGGGCAGGTCTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS TCA 90 bp | GCCAGGATACAGGACTGGCTGAGCAACAGTTTGTCAGCCGAGACCTaGTACTCAATGTTGCCTCCATCTCTGCTCTCTGCATCCACCTGT | + |
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Preference number: 5 (lower is better) Translates to: ARIQDWLSNSLSAET*YSMLPPSLLSASTC Trigger: ACAGGTGGATGCAGAGAGCAGAGATGGAGGCAACATTGAGTATCAGGTCTCGGCTGACAAACTGTTGCTCAGCCAGTCCTGTATCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS GCA 90 bp | GCAGCAGGGTCATTGGTTGTGCGTCTTCGACTTTTGTTCTCTGGTTaGTTCTTGTTGGGTTTGAGGCCCTCGATCCCAGTGGGCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: AAGSLVVRLRLLFSG*FLLGLRPSIPVGLK Trigger: CTTCAAGCCCACTGGGATCGAGGGCCTCAAACCCAACAAGAAGCAACCAGAGAACAAAAGTCGAAGACGCACAACCAATGACCCTGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS GCA 90 bp | TTGTGTTACTGCACAGCAGCAGTTCACGGCCCTCACAGCACACGGTaGAGTAGGACTGATAGCCGTCCTCGTCATACATGTAGAAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: LCYCTAAVHGPHSTR*SRTDSRPRHTCRRA Trigger: AGCTCTTCTACATGTATGACGAGGACGGCTATCAGTCCTACTGCACCGTGTGCTGTGAGGGCCGTGAACTGCTGCTGTGCAGTAACACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CCA 90 bp | GTTCTGCATCCTCTGTTCTCCACTGTGCAGACTGCCTCCAAGACTTaGGTCAAAGGAACAGTCTTGGGGTCTGAAGACTGGTCACTGCAG | + |
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Preference number: 5 (lower is better) Translates to: VLHPLFSTVQTASKT*VKGTVLGSEDWSLQ Trigger: CTGCAGTGACCAGTCTTCAGACCCCAAGACTGTTCCTTTGACCCAAGTCTTGGAGGCAGTCTGCACAGTGGAGAACAGAGGATGCAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS TCA 90 bp | GCAGACTGCCTCCAAGACTTGGGTCAAAGGAACAGTCTTGGGGTCTaGAGACTGGTCACTGCAGGTCCCACTGATGATAATACAGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: ADCLQDLGQRNSLGV*RLVTAGPTDDNTVL Trigger: GAGGACTGTATTATCATCAGTGGGACCTGCAGTGACCAGTCTTCAGACCCCAAGACTGTTCCTTTGACCCAAGTCTTGGAGGCAGTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CCA 90 bp | AGAAGCAGCAGGGTCATTGGTTGTGCGTCTTCGACTTTTGTTCTCTaGTTGCTTCTTGTTGGGTTTGAGGCCCTCGATCCCAGTGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: RSSRVIGCASSTFVL*LLLVGFEALDPSGL Trigger: AAGCCCACTGGGATCGAGGGCCTCAAACCCAACAAGAAGCAACCAGAGAACAAAAGTCGAAGACGCACAACCAATGACCCTGCTGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS GCA 90 bp | AATTCCATCAAACAGAGACAGGACTCTAATGGGCCTCCTTTTGGCTaGAGGAATCGCTGGGTACAACTTGGGCGGCTCAAATTCTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: NSIKQRQDSNGPPFG*RNRWVQLGRLKFFQ Trigger: CTGGAAGAATTTGAGCCGCCCAAGTTGTACCCAGCGATTCCTGCAGCCAAAAGGAGGCCCATTAGAGTCCTGTCTCTGTTTGATGGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS GCA 90 bp | TTTGATTTGGCCTTCATGCTTAACGGTTCCCACAGCGATGGACTCTaGACAGACTTCGGAGGCAATGTACTTTTCCACTTTAATACCCAA | + |
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Preference number: 5 (lower is better) Translates to: FDLAFMLNGSHSDGL*TDFGGNVLFHFNTQ Trigger: TTGGGTATTAAAGTGGAAAAGTACATTGCCTCCGAAGTCTGTGCAGAGTCCATCGCTGTGGGAACCGTTAAGCATGAAGGCCAAATCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS GCA 90 bp | CTTTTCCACTTTAATACCCAACTCCTTGAGCACCAAGTACCCTGTTaGAATTCCATCAAACAGAGACAGGACTCTAATGGGCCTCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: LFHFNTQLLEHQVPC*NSIKQRQDSNGPPF Trigger: AAAAGGAGGCCCATTAGAGTCCTGTCTCTGTTTGATGGAATTGCAACAGGGTACTTGGTGCTCAAGGAGTTGGGTATTAAAGTGGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 90 bp | TCTGGTTGCTTCTTGTTGGGTTTGAGGCCCTCGATCCCAGTGGGCTaGAAGCCACCGTGGGCCCACTCCAGCATGGGCTTCAGCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SGCFLLGLRPSIPVG*KPPWAHSSMGFSWS Trigger: GGACCAGCTGAAGCCCATGCTGGAGTGGGCCCACGGTGGCTTCAAGCCCACTGGGATCGAGGGCCTCAAACCCAACAAGAAGCAACCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS TCA 72 bp | CCTCCCCTCGGTCCTTCCCGCCATAGCTATTTGTCTTaGGGCGCTTGGGTGGGGAGGACTCAGAAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PPLGPSRHSYLS*GAWVGRTQKQQ Trigger: CTGCTGCTTCTGAGTCCTCCCCACCCAAGCGCCTCAAGACAAATAGCTATGGCGGGAAGGACCGAGGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | TTCTTGTTGGGTTTGAGGCCCTCGATCCCAGTGGGCTaGAAGCCACCGTGGGCCCACTCCAGCATGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FLLGLRPSIPVG*KPPWAHSSMGF Trigger: GAAGCCCATGCTGGAGTGGGCCCACGGTGGCTTCAAGCCCACTGGGATCGAGGGCCTCAAACCCAACAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CCA 72 bp | TGCCCAGCAGCTTCTGACGGGCGCCACGGCCCATGTTaGACACGTCTGTGTAGTGTTCAGGAAAGCCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: CPAASDGRHGPC*TRLCSVQESRR Trigger: TCTTCGGCTTTCCTGAACACTACACAGACGTGTCCAACATGGGCCGTGGCGCCCGTCAGAAGCTGCTGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS GCA 72 bp | AGAGTTGGGGCATCACTGGAGTGCCAGAGCCACTGCTaGCCCCCACCTCACCATCCCTATCTTCATCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RVGASLECQSHC*PPPHHPYLHLH Trigger: ATGGAGATGAAGATAGGGATGGTGAGGTGGGGGGCAGCAGTGGCTCTGGCACTCCAGTGATGCCCCAACTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CCA 72 bp | GGGGTTTTAGAGGGTATCCTGGTCTCACAGAAGAGTTaGGGCATCACTGGAGTGCCAGAGCCACTGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: GVLEGILVSQKS*GITGVPEPLLP Trigger: GGGCAGCAGTGGCTCTGGCACTCCAGTGATGCCCCAACTCTTCTGTGAGACCAGGATACCCTCTAAAACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CCA 72 bp | GTGGTCCTTCAAGGGGGCAAACAGGTGTCTGATGACTaGCACACTCCAAGACCTGCCCAGCAGCTTCTGACG | + |
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Preference number: 6 (lower is better) Translates to: VVLQGGKQVSDD*HTPRPAQQLLT Trigger: CGTCAGAAGCTGCTGGGCAGGTCTTGGAGTGTGCCAGTCATCAGACACCTGTTTGCCCCCTTGAAGGACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 90 bp | GTTGTGCGTCTTCGACTTTTGTTCTCTGGTTGCTTCTTGTTGGGTTaGAGGCCCTCGATCCCAGTGGGCTTGAAGCCACCGTGGGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: VVRLRLLFSGCFLLG*RPSIPVGLKPPWAH Trigger: GTGGGCCCACGGTGGCTTCAAGCCCACTGGGATCGAGGGCCTCAAACCCAACAAGAAGCAACCAGAGAACAAAAGTCGAAGACGCACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS GCA 72 bp | TGCACAGCAGCAGTTCACGGCCCTCACAGCACACGGTaGAGTAGGACTGATAGCCGTCCTCGTCATACATGT | + |
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Preference number: 6 (lower is better) Translates to: CTAAVHGPHSTR*SRTDSRPRHTC Trigger: ACATGTATGACGAGGACGGCTATCAGTCCTACTGCACCGTGTGCTGTGAGGGCCGTGAACTGCTGCTGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | CCTCCAGACACTCCACACAGAAGCATCTGCAGCAGCTaGTGTTACTGCACAGCAGCAGTTCACGGCCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: PPDTPHRSICSS*CYCTAAVHGPH Trigger: GTGAGGGCCGTGAACTGCTGCTGTGCAGTAACACAAGCTGCTGCAGATGCTTCTGTGTGGAGTGTCTGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | CCATCAAACAGAGACAGGACTCTAATGGGCCTCCTTTaGGCTGCAGGAATCGCTGGGTACAACTTGGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: PSNRDRTLMGLL*AAGIAGYNLGG Trigger: GCCGCCCAAGTTGTACCCAGCGATTCCTGCAGCCAAAAGGAGGCCCATTAGAGTCCTGTCTCTGTTTGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 90 bp | GGGTCATTGGTTGTGCGTCTTCGACTTTTGTTCTCTGGTTGCTTCTaGTTGGGTTTGAGGCCCTCGATCCCAGTGGGCTTGAAGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: GSLVVRLRLLFSGCF*LGLRPSIPVGLKPP Trigger: CGGTGGCTTCAAGCCCACTGGGATCGAGGGCCTCAAACCCAACAAGAAGCAACCAGAGAACAAAAGTCGAAGACGCACAACCAATGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | CTTCGACTTTTGTTCTCTGGTTGCTTCTTGTTGGGTTaGAGGCCCTCGATCCCAGTGGGCTTGAAGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: LRLLFSGCFLLG*RPSIPVGLKPP Trigger: CGGTGGCTTCAAGCCCACTGGGATCGAGGGCCTCAAACCCAACAAGAAGCAACCAGAGAACAAAAGTCGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | GGCCTCCTTTTGGCTGCAGGAATCGCTGGGTACAACTaGGGCGGCTCAAATTCTTCCAGGTCAGGATCAGTA | + |
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Preference number: 6 (lower is better) Translates to: GLLLAAGIAGYN*GGSNSSRSGSV Trigger: TACTGATCCTGACCTGGAAGAATTTGAGCCGCCCAAGTTGTACCCAGCGATTCCTGCAGCCAAAAGGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 90 bp | GTCTTGAGGCGCTTGGGTGGGGAGGACTCAGAAGCAGCAGGGTCATaGGTTGTGCGTCTTCGACTTTTGTTCTCTGGTTGCTTCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: VLRRLGGEDSEAAGS*VVRLRLLFSGCFLL Trigger: CAACAAGAAGCAACCAGAGAACAAAAGTCGAAGACGCACAACCAATGACCCTGCTGCTTCTGAGTCCTCCCCACCCAAGCGCCTCAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 90 bp | GACACAGGGTCCTTCCTACCGCACGACAAACAGTGGTCTTCCAGATaGCCCTTGTTGTTGGTGACATCAGAAGCCATCTGTTCTCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: DTGSFLPHDKQWSSR*PLLLVTSEAICSRL Trigger: GAGCCGAGAACAGATGGCTTCTGATGTCACCAACAACAAGGGCAATCTGGAAGACCACTGTTTGTCGTGCGGTAGGAAGGACCCTGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS TCA 72 bp | CAGGACTGGCTGAGCAACAGTTTGTCAGCCGAGACCTaGTACTCAATGTTGCCTCCATCTCTGCTCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: QDWLSNSLSAET*YSMLPPSLLSA Trigger: TGCAGAGAGCAGAGATGGAGGCAACATTGAGTATCAGGTCTCGGCTGACAAACTGTTGCTCAGCCAGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS GCA 72 bp | AAACAGAGACAGGACTCTAATGGGCCTCCTTTTGGCTaGAGGAATCGCTGGGTACAACTTGGGCGGCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: KQRQDSNGPPFG*RNRWVQLGRLK Trigger: TTTGAGCCGCCCAAGTTGTACCCAGCGATTCCTGCAGCCAAAAGGAGGCCCATTAGAGTCCTGTCTCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | GTTGTGCGTCTTCGACTTTTGTTCTCTGGTTGCTTCTaGTTGGGTTTGAGGCCCTCGATCCCAGTGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: VVRLRLLFSGCF*LGLRPSIPVGL Trigger: CAAGCCCACTGGGATCGAGGGCCTCAAACCCAACAAGAAGCAACCAGAGAACAAAAGTCGAAGACGCACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | CCGCACGACAAACAGTGGTCTTCCAGATTGCCCTTGTaGTTGGTGACATCAGAAGCCATCTGTTCTCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: PHDKQWSSRLPL*LVTSEAICSRL Trigger: GAGCCGAGAACAGATGGCTTCTGATGTCACCAACAACAAGGGCAATCTGGAAGACCACTGTTTGTCGTGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 90 bp | AGCAGCAGGGTCATTGGTTGTGCGTCTTCGACTTTTGTTCTCTGGTaGCTTCTTGTTGGGTTTGAGGCCCTCGATCCCAGTGGGCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: SSRVIGCASSTFVLW*LLVGFEALDPSGLE Trigger: TTCAAGCCCACTGGGATCGAGGGCCTCAAACCCAACAAGAAGCAACCAGAGAACAAAAGTCGAAGACGCACAACCAATGACCCTGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 90 bp | GAGGACTCAGAAGCAGCAGGGTCATTGGTTGTGCGTCTTCGACTTTaGTTCTCTGGTTGCTTCTTGTTGGGTTTGAGGCCCTCGATCCCA | + |
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Preference number: 6 (lower is better) Translates to: EDSEAAGSLVVRLRL*FSGCFLLGLRPSIP Trigger: TGGGATCGAGGGCCTCAAACCCAACAAGAAGCAACCAGAGAACAAAAGTCGAAGACGCACAACCAATGACCCTGCTGCTTCTGAGTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 90 bp | TTCCTACCGCACGACAAACAGTGGTCTTCCAGATTGCCCTTGTTGTaGGTGACATCAGAAGCCATCTGTTCTCGGCTCTCCTCATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: FLPHDKQWSSRLPLL*VTSEAICSRLSSSS Trigger: GGAGGATGAGGAGAGCCGAGAACAGATGGCTTCTGATGTCACCAACAACAAGGGCAATCTGGAAGACCACTGTTTGTCGTGCGGTAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 90 bp | ACTCTAATGGGCCTCCTTTTGGCTGCAGGAATCGCTGGGTACAACTaGGGCGGCTCAAATTCTTCCAGGTCAGGATCAGTAGTGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: TLMGLLLAAGIAGYN*GGSNSSRSGSVVKK Trigger: CTTCTTCACTACTGATCCTGACCTGGAAGAATTTGAGCCGCCCAAGTTGTACCCAGCGATTCCTGCAGCCAAAAGGAGGCCCATTAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS GCA 72 bp | GTGGGGAGGACTCAGAAGCAGCAGGGTCATTGGTTGTaGGTCTTCGACTTTTGTTCTCTGGTTGCTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: VGRTQKQQGHWL*VFDFCSLVASC Trigger: ACAAGAAGCAACCAGAGAACAAAAGTCGAAGACGCACAACCAATGACCCTGCTGCTTCTGAGTCCTCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CCA 72 bp | TCCTGGCTCCAGTCAACCGATGGGGTACTGATGCTCTaGGGTATCACATCTTCATCTGTGAGGTCAATGATG | + |
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Preference number: 6 (lower is better) Translates to: SWLQSTDGVLML*GITSSSVRSMM Trigger: CATCATTGACCTCACAGATGAAGATGTGATACCCCAGAGCATCAGTACCCCATCGGTTGACTGGAGCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CCA 72 bp | AGGGTCATTGGTTGTGCGTCTTCGACTTTTGTTCTCTaGTTGCTTCTTGTTGGGTTTGAGGCCCTCGATCCC | + |
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Preference number: 6 (lower is better) Translates to: RVIGCASSTFVL*LLLVGFEALDP Trigger: GGGATCGAGGGCCTCAAACCCAACAAGAAGCAACCAGAGAACAAAAGTCGAAGACGCACAACCAATGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CCA 72 bp | AAGGACACAGGGTCCTTCCTACCGCACGACAAACAGTaGTCTTCCAGATTGCCCTTGTTGTTGGTGACATCA | + |
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Preference number: 6 (lower is better) Translates to: KDTGSFLPHDKQ*SSRLPLLLVTS Trigger: TGATGTCACCAACAACAAGGGCAATCTGGAAGACCACTGTTTGTCGTGCGGTAGGAAGGACCCTGTGTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | TCAGGCTGGATGCTTTCCTCTTGGATGGTTGTGAGCTaGTTCTGCATCCTCTGTTCTCCACTGTGCAGACTG | + |
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Preference number: 6 (lower is better) Translates to: SGWMLSSWMVVS*FCILCSPLCRL Trigger: CAGTCTGCACAGTGGAGAACAGAGGATGCAGAACAAGCTCACAACCATCCAAGAGGAAAGCATCCAGCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | GAAGCAGCAGGGTCATTGGTTGTGCGTCTTCGACTTTaGTTCTCTGGTTGCTTCTTGTTGGGTTTGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: EAAGSLVVRLRL*FSGCFLLGLRP Trigger: GGGCCTCAAACCCAACAAGAAGCAACCAGAGAACAAAAGTCGAAGACGCACAACCAATGACCCTGCTGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | CACGACAAACAGTGGTCTTCCAGATTGCCCTTGTTGTaGGTGACATCAGAAGCCATCTGTTCTCGGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: HDKQWSSRLPLL*VTSEAICSRLS Trigger: GGAGAGCCGAGAACAGATGGCTTCTGATGTCACCAACAACAAGGGCAATCTGGAAGACCACTGTTTGTCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | CTACCGCACGACAAACAGTGGTCTTCCAGATTGCCCTaGTTGTTGGTGACATCAGAAGCCATCTGTTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LPHDKQWSSRLP*LLVTSEAICSR Trigger: CCGAGAACAGATGGCTTCTGATGTCACCAACAACAAGGGCAATCTGGAAGACCACTGTTTGTCGTGCGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 90 bp | GTTGCAATTCCATCAAACAGAGACAGGACTCTAATGGGCCTCCTTTaGGCTGCAGGAATCGCTGGGTACAACTTGGGCGGCTCAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: VAIPSNRDRTLMGLL*AAGIAGYNLGGSNS Trigger: AGAATTTGAGCCGCCCAAGTTGTACCCAGCGATTCCTGCAGCCAAAAGGAGGCCCATTAGAGTCCTGTCTCTGTTTGATGGAATTGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS TCA 72 bp | CTCCAAGACTTGGGTCAAAGGAACAGTCTTGGGGTCTaGAGACTGGTCACTGCAGGTCCCACTGATGATAAT | + |
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Preference number: 6 (lower is better) Translates to: LQDLGQRNSLGV*RLVTAGPTDDN Trigger: ATTATCATCAGTGGGACCTGCAGTGACCAGTCTTCAGACCCCAAGACTGTTCCTTTGACCCAAGTCTTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS GCA 72 bp | TCATTGGTTGTGCGTCTTCGACTTTTGTTCTCTGGTTaGTTCTTGTTGGGTTTGAGGCCCTCGATCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SLVVRLRLLFSG*FLLGLRPSIPV Trigger: CACTGGGATCGAGGGCCTCAAACCCAACAAGAAGCAACCAGAGAACAAAAGTCGAAGACGCACAACCAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CCA 72 bp | ACTTGGGTCAAAGGAACAGTCTTGGGGTCTGAAGACTaGTCACTGCAGGTCCCACTGATGATAATACAGTCC | + |
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Preference number: 6 (lower is better) Translates to: TWVKGTVLGSED*SLQVPLMIIQS Trigger: GGACTGTATTATCATCAGTGGGACCTGCAGTGACCAGTCTTCAGACCCCAAGACTGTTCCTTTGACCCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | GTCATTGGTTGTGCGTCTTCGACTTTTGTTCTCTGGTaGCTTCTTGTTGGGTTTGAGGCCCTCGATCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: VIGCASSTFVLW*LLVGFEALDPS Trigger: ACTGGGATCGAGGGCCTCAAACCCAACAAGAAGCAACCAGAGAACAAAAGTCGAAGACGCACAACCAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | TCCTTCCTACCGCACGACAAACAGTGGTCTTCCAGATaGCCCTTGTTGTTGGTGACATCAGAAGCCATCTGT | + |
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Preference number: 6 (lower is better) Translates to: SFLPHDKQWSSR*PLLLVTSEAIC Trigger: ACAGATGGCTTCTGATGTCACCAACAACAAGGGCAATCTGGAAGACCACTGTTTGTCGTGCGGTAGGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS TCA 72 bp | ACTAATCAGGCTGGATGCTTTCCTCTTGGATGGTTGTaGGCTTGTTCTGCATCCTCTGTTCTCCACTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: TNQAGCFPLGWL*ACSASSVLHCA Trigger: TGCACAGTGGAGAACAGAGGATGCAGAACAAGCTCACAACCATCCAAGAGGAAAGCATCCAGCCTGATTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS GCA 72 bp | TTTAATACCCAACTCCTTGAGCACCAAGTACCCTGTTaGAATTCCATCAAACAGAGACAGGACTCTAATGGG | + |
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Preference number: 6 (lower is better) Translates to: FNTQLLEHQVPC*NSIKQRQDSNG Trigger: CCCATTAGAGTCCTGTCTCTGTTTGATGGAATTGCAACAGGGTACTTGGTGCTCAAGGAGTTGGGTATTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CCA 72 bp | TTTGTAATGTTCCTGATGTCATCCACATATTTGATTTaGCCTTCATGCTTAACGGTTCCCACAGCGATGGAC | + |
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Preference number: 6 (lower is better) Translates to: FVMFLMSSTYLI*PSCLTVPTAMD Trigger: GTCCATCGCTGTGGGAACCGTTAAGCATGAAGGCCAAATCAAATATGTGGATGACATCAGGAACATTACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | GAGGCAATGTACTTTTCCACTTTAATACCCAACTCCTaGAGCACCAAGTACCCTGTTGCAATTCCATCAAAC | + |
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Preference number: 6 (lower is better) Translates to: EAMYFSTLIPNS*STKYPVAIPSN Trigger: GTTTGATGGAATTGCAACAGGGTACTTGGTGCTCAAGGAGTTGGGTATTAAAGTGGAAAAGTACATTGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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| CDS CAA 72 bp | TGTTCCTTTGTAATGTTCCTGATGTCATCCACATATTaGATTTGGCCTTCATGCTTAACGGTTCCCACAGCG | + |
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Preference number: 6 (lower is better) Translates to: CSFVMFLMSSTY*IWPSCLTVPTA Trigger: CGCTGTGGGAACCGTTAAGCATGAAGGCCAAATCAAATATGTGGATGACATCAGGAACATTACAAAGGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119996.3 |
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