RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNM2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033335

Ensembl transcript IDs: ENSMUST00000072362.14, ENSMUST00000091087.13, ENSMUST00000115404.11, ENSMUST00000165766.9, ENSMUST00000172482.8, ENSMUST00000172833.2, ENSMUST00000173397.8, ENSMUST00000174050.8, ENSMUST00000174828.2

Found 542 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCGGTGGGAGCCGAGGCTGCAGAGGCACCCAGGGCCCACCCTGTaGGGACATCTGGTTGGGAGCCAAGAGGCCTCTGATGTCTCCCCA +
Preference number: 1 (lower is better)
Translates to: RRWEPRLQRHPGPTL*GHLVGSQEASDVSP
Trigger: TGGGGAGACATCAGAGGCCTCTTGGCTCCCAACCAGATGTCCCCACAGGGTGGGCCCTGGGTGCCTCTGCAGCCTCGGCTCCCACCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR GCA 90 bp GGCAGGCACTTAACAGTGGTCAATCCAGGCGGTGGGAGCCGAGGCTaGAGAGGCACCCAGGGCCCACCCTGTGGGGACATCTGGTTGGGA +
Preference number: 1 (lower is better)
Translates to: GRHLTVVNPGGGSRG*RGTQGPPCGDIWLG
Trigger: TCCCAACCAGATGTCCCCACAGGGTGGGCCCTGGGTGCCTCTGCAGCCTCGGCTCCCACCGCCTGGATTGACCACTGTTAAGTGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR TCA 90 bp GAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACTCCTaGGGAGTCCTTAGGAAAGGTGGGCAGTTCCTGGACCCCAGAAAG +
Preference number: 1 (lower is better)
Translates to: EPGGSALDLLGLAHS*GVLRKGGQFLDPRK
Trigger: CTTTCTGGGGTCCAGGAACTGCCCACCTTTCCTAAGGACTCCTCAGGAGTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR GCA 90 bp GCAGGTGTGACGGCAAGAATGAGGCTGCTCTCGCGGCTGATGAACTaGAGGATCATGTCCTTGATCTGGTACTCGATGTCTGGCGGCTGG +
Preference number: 1 (lower is better)
Translates to: AGVTARMRLLSRLMN*RIMSLIWYSMSGGW
Trigger: CCAGCCGCCAGACATCGAGTACCAGATCAAGGACATGATCCTGCAGTTCATCAGCCGCGAGAGCAGCCTCATTCTTGCCGTCACACCTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174828.2
3UTR CCA 90 bp ATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTaGCTCACTCCTGAGGAGTCCTTAGGAAAGGTGGGCAGTTCCTGG +
Preference number: 1 (lower is better)
Translates to: IYNLSQVGQHWTCWA*LTPEESLGKVGSSW
Trigger: CCAGGAACTGCCCACCTTTCCTAAGGACTCCTCAGGAGTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR GCA 90 bp GAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTaGTGGGCCTGGCTCACTCCTGAGGAGTCCTTAGGAAAGGTGGGC +
Preference number: 1 (lower is better)
Translates to: ELYIYNLSQVGQHWT*WAWLTPEESLGKVG
Trigger: GCCCACCTTTCCTAAGGACTCCTCAGGAGTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR CCA 90 bp GGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTaGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATA +
Preference number: 1 (lower is better)
Translates to: GLRKAQRHLWVRSLG*AQLVWLIWPKELYI
Trigger: TATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR CCA 90 bp CTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTaGGCCTGGCTCACTCCTGAGGAGTCCTTAGGAAAGGTGGGCAGT +
Preference number: 1 (lower is better)
Translates to: LYIYNLSQVGQHWTC*AWLTPEESLGKVGS
Trigger: ACTGCCCACCTTTCCTAAGGACTCCTCAGGAGTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR CCA 90 bp CCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTaGACCTGCTGGGCCTGGCTCACTCCTGAGGAGTCCTTAGGAAAG +
Preference number: 1 (lower is better)
Translates to: PKELYIYNLSQVGQH*TCWAWLTPEESLGK
Trigger: CTTTCCTAAGGACTCCTCAGGAGTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR GCA 90 bp GGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCGGTCAGCACTGGACCTaGTGGGCCTGGCTCACTCCT +
Preference number: 2 (lower is better)
Translates to: GPPGLRKAQRHLWVRSLGGQHWT*WAWLTP
Trigger: AGGAGTGAGCCAGGCCCAGCAGGTCCAGTGCTGACC...GCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR CCA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGCAGGTGGGTCAGCACTaGACCTGCTGGGCCTGGCTC +
Preference number: 2 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLQVGQH*TCWAWL
Trigger: GAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTG...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR CCA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGCAGCACTGGACCTGCTaGGCCTGGCTCACTCCTGAG +
Preference number: 2 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLQHWTC*AWLTPE
Trigger: CTCAGGAGTGAGCCAGGCCCAGCAGGTCCAGTGCTG...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR TCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGGCCTGGCTCACTCCTaGGGAGTCCTTAGGAAAGGT +
Preference number: 2 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWGLAHS*GVLRKG
Trigger: ACCTTTCCTAAGGACTCCTCAGGAGTGAGCCAGGCC...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR TCA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCCTGGCTCACTCCTaGGGAGTCCTTAGGAAAGGT +
Preference number: 2 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLGLAHS*GVLRKG
Trigger: ACCTTTCCTAAGGACTCCTCAGGAGTGAGCCAGGCC...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR GCA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACGGAAAGGGCAGGGCTTaGCCACGGGGAGCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHGKGRA*PRGAWS
Trigger: GGACCAGGCTCCCCGTGGGCAAGCCCTGCCCTTTCC...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR CCA 90 bp GGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCCCATGTGCTGTGCTGTaGGCCTCCTCACCCTTCATT +
Preference number: 2 (lower is better)
Translates to: GPPGLRKAQRHLWVRSLGPCAVL*ASSPFI
Trigger: AATGAAGGGTGAGGAGGCCCACAGCACAGCACATGG...GCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR GCA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTGGAAAGGGCAGGGCTTaGCCACGGGGAGCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPGKGRA*PRGAWS
Trigger: GGACCAGGCTCCCCGTGGGCAAGCCCTGCCCTTTCC...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR GCA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGTTCCTTCTCTCTGGGTaGAGGGCCTCAGAGAAGGCT +
Preference number: 2 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLFLLSG*RASEKA
Trigger: AGCCTTCTCTGAGGCCCTGCACCCAGAGAGAAGGAA...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
3UTR-3UTR GCA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTCTCCTCATCCCAAAGTaGAAAGCCCCCATGTGCTGT +
Preference number: 2 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGLLIPK*KAPMCC
Trigger: ACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAG...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR CCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGAAAGAACAAAGGCTCTaGAGGAGCTCCAGAAGAGTC +
Preference number: 2 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWKEQRL*RSSRRV
Trigger: GACTCTTCTGGAGCTCCTCCAGAGCCTTTGTTCTTT...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR TCA 90 bp CAAGTCCATGTTGGCAGGTGTGACGGCAAGAATGAGGCTGCTCTCGCGGCTGATAGTAGACCCGAAGGTTaGTGGGCACAGGGGAGATGC +
Preference number: 2 (lower is better)
Translates to: QVHVGRCDGKNEAALAADSRPEG*WAQGRC
Trigger: GCATCTCCCCTGTGCCCATCAACCTTCGGGTCTACT...ATCAGCCGCGAGAGCAGCCTCATTCTTGCCGTCACACCTGCCAACATGGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174828.2
3UTR-3UTR GCA 90 bp TCTGAGTTGGCCAAGTCCATGTTGGCAGGTGTGACGGCAAGAATGAGGCTGCTCGACCCGGTCAGTCTCTaGTTCGATCTCCTGCCGGAC +
Preference number: 2 (lower is better)
Translates to: SELAKSMLAGVTARMRLLDPVSL*FDLLPD
Trigger: GTCCGGCAGGAGATCGAAGCAGAGACTGACCGGGTC...GAGCAGCCTCATTCTTGCCGTCACACCTGCCAACATGGACTTGGCCAACTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174828.2
3UTR-3UTR GCA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGGAAAGGGCAGGGCTTaGCCACGGGGAGCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: NMAKGALYIQLEPGGSALGKGRA*PRGAWS
Trigger: GGACCAGGCTCCCCGTGGGCAAGCCCTGCCCTTTCC...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR CCA 90 bp GAGTTGGCCAAGTCCATGTTGGCAGGTGTGACGGCAAGAATGAGGCTGCTCTCGCACCTTAGTGATGCCTaGGAGGTCGATGAGGGTCAA +
Preference number: 2 (lower is better)
Translates to: ELAKSMLAGVTARMRLLSHLSDA*EVDEGQ
Trigger: TTGACCCTCATCGACCTCCCAGGCATCACTAAGGTG...CGAGAGCAGCCTCATTCTTGCCGTCACACCTGCCAACATGGACTTGGCCAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174828.2
3UTR-3UTR GCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACGGTCAGCACTGGACCTaGTGGGCCTGGCTCACTCCT +
Preference number: 2 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYGQHWT*WAWLTP
Trigger: AGGAGTGAGCCAGGCCCAGCAGGTCCAGTGCTGACC...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR CCA 90 bp GAGTTGGCCAAGTCCATGTTGGCAGGTGTGACGGCAAGAATGAGGCTGCTCTCGATCATGTCCTTGATCTaGTACTCGATGTCTGGCGGC +
Preference number: 2 (lower is better)
Translates to: ELAKSMLAGVTARMRLLSIMSLI*YSMSGG
Trigger: GCCGCCAGACATCGAGTACCAGATCAAGGACATGAT...CGAGAGCAGCCTCATTCTTGCCGTCACACCTGCCAACATGGACTTGGCCAACTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174828.2
3UTR-3UTR GCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACTGCAAAGCCCCCATGTaGTGTGCTGTGGGCCTCCTC +
Preference number: 2 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYCKAPM*CAVGLL
Trigger: GAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCA...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR CAA 90 bp CAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACAACTaGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACT +
Preference number: 2 (lower is better)
Translates to: QLVWLIWPKELYIYN*SQVGQHWTCWAWLT
Trigger: AGTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR TCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACGGCCTGGCTCACTCCTaGGGAGTCCTTAGGAAAGGT +
Preference number: 2 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYGLAHS*GVLRKG
Trigger: ACCTTTCCTAAGGACTCCTCAGGAGTGAGCCAGGCC...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR CCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGAAAGAACAAAGGCTCTaGAGGAGCTCCAGAAGAGTC +
Preference number: 2 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLKEQRL*RSSRRV
Trigger: GACTCTTCTGGAGCTCCTCCAGAGCCTTTGTTCTTT...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR CCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACCCATGTGCTGTGCTGTaGGCCTCCTCACCCTTCATT +
Preference number: 2 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYPCAVL*ASSPFI
Trigger: AATGAAGGGTGAGGAGGCCCACAGCACAGCACATGG...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR CCA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACCCATGTGCTGTGCTGTaGGCCTCCTCACCCTTCATT +
Preference number: 2 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHPCAVL*ASSPFI
Trigger: AATGAAGGGTGAGGAGGCCCACAGCACAGCACATGG...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR TCA 72 bp AGAGTGAGGGTGGCCAGAGCTGAGGCCCTCCAGGCCTaGGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCC +
Preference number: 3 (lower is better)
Translates to: RVRVARAEALQA*GRHKGTSGCGA
Trigger: GGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCACCCTCACTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR CAA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGCCTCCTCACCCTTCATaGTCATGTCCACTAGGGCGA +
Preference number: 3 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLPPHPS*SCPLGR
Trigger: TCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGG...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR TCA 72 bp GGGTCAGCACTGGACCTGCTGGGCCTGGCTCACTCCTaGGGAGTCCTTAGGAAAGGTGGGCAGTTCCTGGAC +
Preference number: 3 (lower is better)
Translates to: GSALDLLGLAHS*GVLRKGGQFLD
Trigger: GTCCAGGAACTGCCCACCTTTCCTAAGGACTCCTCAGGAGTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR CCA 72 bp TTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTaGCTCACTCCTGAGGAGTCCTTAGGAAAGGTGGGC +
Preference number: 3 (lower is better)
Translates to: LSQVGQHWTCWA*LTPEESLGKVG
Trigger: GCCCACCTTTCCTAAGGACTCCTCAGGAGTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR CAA 90 bp CCCCACCGGCACCTTAGTGATGCCTGGGAGGTCGATGAGGGTCAAGTTCAACACACAGGGGAGATGCCTTaGTTGGTGCCTGTGACCCGG +
Preference number: 3 (lower is better)
Translates to: PHRHLSDAWEVDEGQVQHTGEMP*LVPVTR
Trigger: CCGGGTCACAGGCACCAACAAAGGCATCTCCCCTGT...GTGTTGAACTTGACCCTCATCGACCTCCCAGGCATCACTAAGGTGCCGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174828.2
3UTR-3UTR CAA 90 bp TCTGAGTTGGCCAAGTCCATGTTGGCAGGTGTGACGGCAAGAATGAGGCTGCTCGGGGAGATGCCTTTGTaGGTGCCTGTGACCCGGTCA +
Preference number: 3 (lower is better)
Translates to: SELAKSMLAGVTARMRLLGEMPL*VPVTRS
Trigger: TGACCGGGTCACAGGCACCAACAAAGGCATCTCCCC...GAGCAGCCTCATTCTTGCCGTCACACCTGCCAACATGGACTTGGCCAACTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174828.2
3UTR CCA 72 bp TACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTaGGCCTGGCTCACTCCTGAGGAGTCCTTAGGAAAG +
Preference number: 3 (lower is better)
Translates to: YNLSQVGQHWTC*AWLTPEESLGK
Trigger: CTTTCCTAAGGACTCCTCAGGAGTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR CCA 72 bp AAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTaGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAG +
Preference number: 3 (lower is better)
Translates to: KAQRHLWVRSLG*AQLVWLIWPKE
Trigger: CTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR CAA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACCCTCCTCACCCTTCATaGTCATGTCCACTAGGGCGA +
Preference number: 3 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHPPHPS*SCPLGR
Trigger: TCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGG...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR-3UTR CAA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCCCTCCTCACCCTTCATaGTCATGTCCACTAGGGCGA +
Preference number: 3 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSPPHPS*SCPLGR
Trigger: TCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGG...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR GCA 72 bp ATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTaGTGGGCCTGGCTCACTCCTGAGGAGTCCTTAGGA +
Preference number: 3 (lower is better)
Translates to: IYNLSQVGQHWT*WAWLTPEESLG
Trigger: TCCTAAGGACTCCTCAGGAGTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR CCA 72 bp CTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTaGACCTGCTGGGCCTGGCTCACTCCTGAGGAGTCC +
Preference number: 3 (lower is better)
Translates to: LYIYNLSQVGQH*TCWAWLTPEES
Trigger: GGACTCCTCAGGAGTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR GCA 72 bp ACGGCAAGAATGAGGCTGCTCTCGCGGCTGATGAACTaGAGGATCATGTCCTTGATCTGGTACTCGATGTCT +
Preference number: 3 (lower is better)
Translates to: TARMRLLSRLMN*RIMSLIWYSMS
Trigger: AGACATCGAGTACCAGATCAAGGACATGATCCTGCAGTTCATCAGCCGCGAGAGCAGCCTCATTCTTGCCGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174828.2
3UTR TCA 72 bp TCAATAAATTATGGTCAGAAAGTTAATAGTGCCTGGTaGCTGGGCTTAGGGATGTCAGCTTGGGACAGACCT +
Preference number: 3 (lower is better)
Translates to: SINYGQKVNSAW*LGLGMSAWDRP
Trigger: AGGTCTGTCCCAAGCTGACATCCCTAAGCCCAGTCACCAGGCACTATTAACTTTCTGACCATAATTTATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGGCCGGCCTGGTGGGTaGACACTGGACACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWGRPGG*TLDTGR
Trigger: CCGACCTGTGTCCAGTGTGCACCCACCAGGCCGGCC...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGCACAGGTCGGCGCTGTaGAGTGGGGCTGTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWHRSAL*SGAVAA
Trigger: AGCGGCCACAGCCCCACTCCACAGCGCCGACCTGTG...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp GGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCCCTCCTTGGCCAGCTTaGGGGCGTCTGAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GPPGLRKAQRHLWVRSLGPPWPA*GRLSWP
Trigger: TGGCCAACTCAGACGCCCTCAAGCTGGCCAAGGAGG...GCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGCGTGTCATCGACCGGTaGGGGCACGGGTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWRVIDR*GHGCGH
Trigger: GTGTCCACACCCGTGCCCCCACCGGTCGATGACACG...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCCTGGTGGGTGCACACTaGACACAGGTCGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: GPPGLRKAQRHLWVRSLGLVGAH*TQVGAV
Trigger: CACAGCGCCGACCTGTGTCCAGTGTGCACCCACCAG...GCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTTCCAGGTGGCAGCTCTaGCCGATGGAGCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWASRWQL*PMELKA
Trigger: CGCCTTCAGCTCCATCGGTCAGAGCTGCCACCTGGA...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGTCCAGGTGGCAGCTCTaGCCGATGGAGCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWSRWQL*PMELKA
Trigger: CGCCTTCAGCTCCATCGGTCAGAGCTGCCACCTGGA...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGTCGGCGCTGTGGAGTaGGGCTGTGGCCGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLVGAVE*GCGRWC
Trigger: ACACCAGCGGCCACAGCCCCACTCCACAGCGCCGAC...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGCTGGTGGGTGCACACTaGACACAGGTCGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLLVGAH*TQVGAV
Trigger: CACAGCGCCGACCTGTGTCCAGTGTGCACCCACCAG...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTGACCCGGTCAGTCTCTaGTTCGATCTCCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWADPVSL*FDLLPD
Trigger: GTCCGGCAGGAGATCGAAGCAGAGACTGACCGGGTC...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGCCGGCCTGGTGGGTaGACACTGGACACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: KEGALAPWPRGEPASRWFGRPGG*TLDTGR
Trigger: CCGACCTGTGTCCAGTGTGCACCCACCAGGCCGGCC...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp GGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCGGTTTTCTGCAAGTGTaGGGTGCCCATGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GPPGLRKAQRHLWVRSLGGFLQV*GAHAVS
Trigger: GCTGACCGCATGGGCACCCCACACTTGCAGAAAACC...GCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGCGTGTCATCGACCGGTaGGGGCACGGGTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLRVIDR*GHGCGH
Trigger: GTGTCCACACCCGTGCCCCCACCGGTCGATGACACG...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp GGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGCCGCTGGTGTTTTaGAGCCACGTGTCATCGACC +
Preference number: 4 (lower is better)
Translates to: GPPGLRKAQRHLWVRSLGWPLVF*SHVSST
Trigger: GGTCGATGACACGTGGCTCCAAAACACCAGCGGCCA...GCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCGGCAAACACACTCTGTaGTCCAGGCCGGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: GPPGLRKAQRHLWVRSLGGKHTL*SRPGWD
Trigger: ATCCCATCCCGGCCTGGACCACAGAGTGTGTTTGCC...GCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTTCTGACCGATGGAGCTaGAGGCGTCCTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWASDRWS*RRPAAC
Trigger: ACAAGCTGCAGGACGCCTTCAGCTCCATCGGTCAGA...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGTCTGACCGATGGAGCTaGAGGCGTCCTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWSDRWS*RRPAAC
Trigger: ACAAGCTGCAGGACGCCTTCAGCTCCATCGGTCAGA...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTAGTAGACCCGAAGGTTaGTGGGCACAGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWASRPEG*WAQGRC
Trigger: GCATCTCCCCTGTGCCCATCAACCTTCGGGTCTACT...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGAGCTGAAGGCGTCCTaGAGCTTGTTAACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLELKAS*SLLTSG
Trigger: CCCGCTGGTTAACAAGCTGCAGGACGCCTTCAGCTC...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCAGTGTGGGGTGCCCATaGGGTCAGCCATGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGSVGCP*GQPCAG
Trigger: ACCGGCACATGGCTGACCGCATGGGCACCCCACACT...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTTCTGCAAGTGTGGGGTaGCCATGCGGTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWASASVG*PCGQPC
Trigger: ACATGGCTGACCGCATGGGCACCCCACACTTGCAGA...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACGGCCGGCCTGGTGGGTaGACACTGGACACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHGRPGG*TLDTGR
Trigger: CCGACCTGTGTCCAGTGTGCACCCACCAGGCCGGCC...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGGGCCGGCCTGGTGGGTaGACACTGGACACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGGRPGG*TLDTGR
Trigger: CCGACCTGTGTCCAGTGTGCACCCACCAGGCCGGCC...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGACCAGGGGGAATCCGTaGTGGCCGAGATGGTATCTG +
Preference number: 4 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLTRGNP*WPRWYL
Trigger: CAGATACCATCTCGGCCAGCACGGATTCCCCCTGGT...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGCCACCAGGTTACGGATaGTCTCCACCTGTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWPPGYG*SPPVAP
Trigger: TGGAGCGACAGGTGGAGACCATCCGTAACCTGGTGG...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACGTCGGCGCTGTGGAGTaGGGCTGTGGCCGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHVGAVE*GCGRWC
Trigger: ACACCAGCGGCCACAGCCCCACTCCACAGCGCCGAC...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAGGGCCTCAGGTCGGCGCTGTGGAGTaGGGCTGTGGCCGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LVGGLGEAPSFSLGAGPQVGAVE*GCGRWC
Trigger: ACACCAGCGGCCACAGCCCCACTCCACAGCGCCGAC...CTGAGGCCCTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCACAGGTCGGCGCTGTaGAGTGGGGCTGTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHHRSAL*SGAVAA
Trigger: AGCGGCCACAGCCCCACTCCACAGCGCCGACCTGTG...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGCACAGGTCGGCGCTGTaGAGTGGGGCTGTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLHRSAL*SGAVAA
Trigger: AGCGGCCACAGCCCCACTCCACAGCGCCGACCTGTG...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGCACAGGTCGGCGCTGTaGAGTGGGGCTGTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGHRSAL*SGAVAA
Trigger: AGCGGCCACAGCCCCACTCCACAGCGCCGACCTGTG...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCCTGGTGGGTGCACACTaGACACAGGTCGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGLVGAH*TQVGAV
Trigger: CACAGCGCCGACCTGTGTCCAGTGTGCACCCACCAG...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTCAGGCCGGGATGGGATaGGAGGTGCTGAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGQAGMG*EVLRRR
Trigger: CCTCCTTCTCAGCACCTCCCATCCCATCCCGGCCTG...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCCAGGCCGGGATGGGATaGGAGGTGCTGAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGQAGMG*EVLRRR
Trigger: CCTCCTTCTCAGCACCTCCCATCCCATCCCGGCCTG...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGCAGGCCGGGATGGGATaGGAGGTGCTGAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLQAGMG*EVLRRR
Trigger: CCTCCTTCTCAGCACCTCCCATCCCATCCCGGCCTG...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCAAACACACTCTGTaGTCCAGGCCGGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLGKHTL*SRPGWD
Trigger: ATCCCATCCCGGCCTGGACCACAGAGTGTGTTTGCC...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGAGGAGCCAATGGAGGTaGTCGCCTGGGCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLRSQWR*SPGHSW
Trigger: CCAGGAGTGCCCAGGCGACCACCTCCATTGGCTCCT...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTTCGGGCAGGAGCCAATaGAGGTGGTCGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: KEGALAPWPRGEPASRWFSGRSQ*RWSPGH
Trigger: GTGCCCAGGCGACCACCTCCATTGGCTCCTGCCCGA...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
3UTR CAA 72 bp AGAGGCACCCAGGGCCCACCCTGTGGGGACATCTGGTaGGGAGCCAAGAGGCCTCTGATGTCTCCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RGTQGPPCGDIW*GAKRPLMSPQF
Trigger: GAACTGGGGAGACATCAGAGGCCTCTTGGCTCCCAACCAGATGTCCCCACAGGGTGGGCCCTGGGTGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGTGCCTGGGAGGTCGATaGGGGTCAAGTTCAACACGT +
Preference number: 4 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLCLGGR*GSSSTR
Trigger: ACGTGTTGAACTTGACCCTCATCGACCTCCCAGGCA...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGTGCCTGGGAGGTCGATaGGGGTCAAGTTCAACACGT +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWCLGGR*GSSSTR
Trigger: ACGTGTTGAACTTGACCCTCATCGACCTCCCAGGCA...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTCAGCTTGAGGGCGTCTaGGTTGGCCAAGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWAQLEGV*VGQVHV
Trigger: AACATGGACTTGGCCAACTCAGACGCCCTCAAGCTG...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCGCGAAGGGTCGGCAGTaGCTCTCGGATGTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGAKGRQ*LSDVVG
Trigger: ACCAACCACATCCGAGAGTCACTGCCGACCCTTCGC...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGACCCGGTCAGTCTCTaGTTCGATCTCCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLDPVSL*FDLLPD
Trigger: GTCCGGCAGGAGATCGAAGCAGAGACTGACCGGGTC...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCGGCTCTGCAGCTTGCTaGGAAGGGTCGGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGGSAAC*EGSAVT
Trigger: AGTCACTGCCGACCCTTCGCAGCAAGCTGCAGAGCC...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp GGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCGAAGAATCTGGTCCTTaGTTCTCCCTTCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: GPPGLRKAQRHLWVRSLGEESGP*FSLLAP
Trigger: GGGAGCGAGAAGGGAGAACCAAGGACCAGATTCTTC...GCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGCGTGTCATCGACCGGTaGGGGCACGGGTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTRVIDR*GHGCGH
Trigger: GTGTCCACACCCGTGCCCCCACCGGTCGATGACACG...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGCGTGTCATCGACCGGTaGGGGCACGGGTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGRVIDR*GHGCGH
Trigger: GTGTCCACACCCGTGCCCCCACCGGTCGATGACACG...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTGTCGGCGCTGTGGAGTaGGGCTGTGGCCGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPVGAVE*GCGRWC
Trigger: ACACCAGCGGCCACAGCCCCACTCCACAGCGCCGAC...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCCTTCACAGGTCGGCGCTGTaGAGTGGGGCTGTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LIPKCKAPMCCAVGLLTLHRSAL*SGAVAA
Trigger: AGCGGCCACAGCCCCACTCCACAGCGCCGACCTGTG...AAGGGTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACAGGGACGGCTCGGCTaGGCGGATAATGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: SSSSQSAKPPCAVLWASSQGRLG*ADNGGP
Trigger: CGGCCCACCATTATCCGCCCAGCCGAGCCGTCCCTG...TGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCCTTCAGGGACGGCTCGGCTaGGCGGATAATGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: LIPKCKAPMCCAVGLLTLQGRLG*ADNGGP
Trigger: CGGCCCACCATTATCCGCCCAGCCGAGCCGTCCCTG...AAGGGTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCAGGGACGGCTCGGCTaGGCGGATAATGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPQGRLG*ADNGGP
Trigger: CGGCCCACCATTATCCGCCCAGCCGAGCCGTCCCTG...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTATGGAGGTGGTCGCCTaGGCACTCCTGGAGGGATAC +
Preference number: 4 (lower is better)
Translates to: ERKEPWPLGPEGSQLVGGMEVVA*ALLEGY
Trigger: GTATCCCTCCAGGAGTGCCCAGGCGACCACCTCCAT...ACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTCGGGCAGGAGCCAATaGAGGTGGTCGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGSGRSQ*RWSPGH
Trigger: GTGCCCAGGCGACCACCTCCATTGGCTCCTGCCCGA...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTTCCAGGTGGCAGCTCTaGCCGATGGAGCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSSRWQL*PMELKA
Trigger: CGCCTTCAGCTCCATCGGTCAGAGCTGCCACCTGGA...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165766.9
CDS-3UTR TCA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTAGTAGACCCGAAGGTTaGTGGGCACAGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGSRPEG*WAQGRC
Trigger: GCATCTCCCCTGTGCCCATCAACCTTCGGGTCTACT...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGCCTCCTTGGCCAGCTTaGGGGCGTCTGAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGPPWPA*GRLSWP
Trigger: TGGCCAACTCAGACGCCCTCAAGCTGGCCAAGGAGG...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGCCCGGATGTCCTTTTTaGCCTCGATGTCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLPGCPF*PRCLSG
Trigger: GCCAGAAAGACATCGAGGGCAAAAAGGACATCCGGG...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGCCCGGATGTCCTTTTTaGCCTCGATGTCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWPGCPF*PRCLSG
Trigger: GCCAGAAAGACATCGAGGGCAAAAAGGACATCCGGG...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTAGTGTGGGGTGCCCATaGGGTCAGCCATGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSSVGCP*GQPCAG
Trigger: ACCGGCACATGGCTGACCGCATGGGCACCCCACACT...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGTCTGCAAGTGTGGGGTaGCCATGCGGTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLSASVG*PCGQPC
Trigger: ACATGGCTGACCGCATGGGCACCCCACACTTGCAGA...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACGGCCGGCCTGGTGGGTaGACACTGGACACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHGRPGG*TLDTGR
Trigger: CCGACCTGTGTCCAGTGTGCACCCACCAGGCCGGCC...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGACCAGGGGGAATCCGTaGTGGCCGAGATGGTATCTG +
Preference number: 4 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLTRGNP*WPRWYL
Trigger: CAGATACCATCTCGGCCAGCACGGATTCCCCCTGGT...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGTTTTCTGCAAGTGTaGGGTGCCCATGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLGFLQV*GAHAVS
Trigger: GCTGACCGCATGGGCACCCCACACTTGCAGAAAACC...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGAAGAATCTGGTCCTTaGTTCTCCCTTCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWEESGP*FSLLAP
Trigger: GGGAGCGAGAAGGGAGAACCAAGGACCAGATTCTTC...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCCTGGTCCTTCTCTaGGTAGACCCCAGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGCLVLL*VDPSAQ
Trigger: CTGCGCGCTGGGGTCTACCCAGAGAAGGACCAGGCA...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTCCACCAGGTTACGGATaGTCTCCACCTGTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGPPGYG*SPPVAP
Trigger: TGGAGCGACAGGTGGAGACCATCCGTAACCTGGTGG...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCTGGCCGCTGGTGTTTTaGAGCCACGTGTCATCGACC +
Preference number: 4 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGWPLVF*SHVSST
Trigger: GGTCGATGACACGTGGCTCCAAAACACCAGCGGCCA...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGTCGGCGCTGTGGAGTaGGGCTGTGGCCGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCVGAVE*GCGRWC
Trigger: ACACCAGCGGCCACAGCCCCACTCCACAGCGCCGAC...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACCACAGGTCGGCGCTGTaGAGTGGGGCTGTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHHRSAL*SGAVAA
Trigger: AGCGGCCACAGCCCCACTCCACAGCGCCGACCTGTG...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGCTGGTGGGTGCACACTaGACACAGGTCGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTLVGAH*TQVGAV
Trigger: CACAGCGCCGACCTGTGTCCAGTGTGCACCCACCAG...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGCTGGTGGGTGCACACTaGACACAGGTCGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLLVGAH*TQVGAV
Trigger: CACAGCGCCGACCTGTGTCCAGTGTGCACCCACCAG...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCTGGTGGGTGCACACTaGACACAGGTCGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHLVGAH*TQVGAV
Trigger: CACAGCGCCGACCTGTGTCCAGTGTGCACCCACCAG...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGCAGGCCGGGATGGGATaGGAGGTGCTGAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTQAGMG*EVLRRR
Trigger: CCTCCTTCTCAGCACCTCCCATCCCATCCCGGCCTG...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTGGCAAACACACTCTGTaGTCCAGGCCGGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: ERKEPWPLGPEGSQLVGGGKHTL*SRPGWD
Trigger: ATCCCATCCCGGCCTGGACCACAGAGTGTGTTTGCC...ACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGAGATGGTATCTGAGGTaGCGCAGAGAAGGGGTCGTT +
Preference number: 4 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLRWYLR*RREGVV
Trigger: AACGACCCCTTCTCTGCGCCACCTCAGATACCATCT...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTAGGAGCCAATGGAGGTaGTCGCCTGGGCACTCCTGG +
Preference number: 4 (lower is better)
Translates to: GAGPQRRLAHEPQGTEGIRSQWR*SPGHSW
Trigger: CCAGGAGTGCCCAGGCGACCACCTCCATTGGCTCCT...AATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCCCGGGTGACAATTCCTaGTCCTCGTGGAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGPGDNS*SSWKEV
Trigger: GACTTCCTTCCACGAGGATCAGGAATTGTCACCCGG...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTAGTAGACCCGAAGGTTaGTGGGCACAGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: KEGALAPWPRGEPASRWFSRPEG*WAQGRC
Trigger: GCATCTCCCCTGTGCCCATCAACCTTCGGGTCTACT...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp TCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCTCCTTGGCCAGCTTaGGGGCGTCTGAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSSSQSAKPPCAVLWASSPPWPA*GRLSWP
Trigger: TGGCCAACTCAGACGCCCTCAAGCTGGCCAAGGAGG...TGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAGGGCCTCAGGCGAAGGGTCGGCAGTaGCTCTCGGATGTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LVGGLGEAPSFSLGAGPQAKGRQ*LSDVVG
Trigger: ACCAACCACATCCGAGAGTCACTGCCGACCCTTCGC...CTGAGGCCCTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACGACCCGGTCAGTCTCTaGTTCGATCTCCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHDPVSL*FDLLPD
Trigger: GTCCGGCAGGAGATCGAAGCAGAGACTGACCGGGTC...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGTCGCGGCTGATGAACTaGAGGATCATGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWSRLMN*RIMSLI
Trigger: GATCAAGGACATGATCCTGCAGTTCATCAGCCGCGA...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp TGTGGGCCTCCTCACCCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGAGTGTGGGGTGCCCATaGGGTCAGCCATGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: CGPPHPSLSCPLGRGGKGSVGCP*GQPCAG
Trigger: ACCGGCACATGGCTGACCGCATGGGCACCCCACACT...CCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTTCTGCAAGTGTGGGGTaGCCATGCGGTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: KEGALAPWPRGEPASRWFSASVG*PCGQPC
Trigger: ACATGGCTGACCGCATGGGCACCCCACACTTGCAGA...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGGGCTCTGCAGCTTGCTaGGAAGGGTCGGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTGSAAC*EGSAVT
Trigger: AGTCACTGCCGACCCTTCGCAGCAAGCTGCAGAGCC...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGCTCTGCAGCTTGCTaGGAAGGGTCGGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSGSAAC*EGSAVT
Trigger: AGTCACTGCCGACCCTTCGCAGCAAGCTGCAGAGCC...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGTCCATCCTCATTCTCTaGCTGGTCCTTCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWSILIL*LVLLWV
Trigger: TACCCAGAGAAGGACCAGGCAGAGAATGAGGATGGA...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTATCATGTCCTTGATCTaGTACTCGATGTCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWAIMSLI*YSMSGG
Trigger: GCCGCCAGACATCGAGTACCAGATCAAGGACATGAT...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGATCATGTCCTTGATCTaGTACTCGATGTCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWIMSLI*YSMSGG
Trigger: GCCGCCAGACATCGAGTACCAGATCAAGGACATGAT...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTTCCAGGGACAGCAGTTaGCTCTGCAGCTTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: KEGALAPWPRGEPASRWFSRDSS*LCSLLR
Trigger: TCGCAGCAAGCTGCAGAGCCAACTGCTGTCCCTGGA...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp GAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTCTTTGGTCTTGCGCGTaGGGTCATCAGGCCGGAAAT +
Preference number: 4 (lower is better)
Translates to: ERKEPWPLGPEGSQLVGGLWSCA*GHQAGN
Trigger: ATTTCCGGCCTGATGACCCCACGCGCAAGACCAAAG...ACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCTGCCTGGTCCTTCTCTaGGTAGACCCCAGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCCLVLL*VDPSAQ
Trigger: CTGCGCGCTGGGGTCTACCCAGAGAAGGACCAGGCA...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTTGCCTGGTCCTTCTCTaGGTAGACCCCAGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFCLVLL*VDPSAQ
Trigger: CTGCGCGCTGGGGTCTACCCAGAGAAGGACCAGGCA...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTCCACCAGGTTACGGATaGTCTCCACCTGTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: KEGALAPWPRGEPASRWFPPGYG*SPPVAP
Trigger: TGGAGCGACAGGTGGAGACCATCCGTAACCTGGTGG...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGTCCATGAGGCTGCTCTaGTCTGCTGATGAATACAGG +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWSMRLL*SADEYR
Trigger: CCTGTATTCATCAGCAGACCAGAGCAGCCTCATGGA...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGTCGGCGCTGTGGAGTaGGGCTGTGGCCGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLVGAVE*GCGRWC
Trigger: ACACCAGCGGCCACAGCCCCACTCCACAGCGCCGAC...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACAGGCCGGGATGGGATaGGAGGTGCTGAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SSSSQSAKPPCAVLWASSQAGMG*EVLRRR
Trigger: CCTCCTTCTCAGCACCTCCCATCCCATCCCGGCCTG...TGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCAGGCCGGGATGGGATaGGAGGTGCTGAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPQAGMG*EVLRRR
Trigger: CCTCCTTCTCAGCACCTCCCATCCCATCCCGGCCTG...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCCTTCGGGCGCTCTTCTGCTaGGCACTCCTGGAGGGATAC +
Preference number: 4 (lower is better)
Translates to: LIPKCKAPMCCAVGLLTLRALFC*ALLEGY
Trigger: GTATCCCTCCAGGAGTGCCCAGCAGAAGAGCGCCCG...AAGGGTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
CDS-3UTR TCA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACTCTGACCGATGGAGCTaGAGGCGTCCTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHSDRWS*RRPAAC
Trigger: ACAAGCTGCAGGACGCCTTCAGCTCCATCGGTCAGA...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACTCCAGGTGGCAGCTCTaGCCGATGGAGCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHSRWQL*PMELKA
Trigger: CGCCTTCAGCTCCATCGGTCAGAGCTGCCACCTGGA...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGAGTAGACCCGAAGGTTaGTGGGCACAGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGSRPEG*WAQGRC
Trigger: GCATCTCCCCTGTGCCCATCAACCTTCGGGTCTACT...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCGCGAAGGGTCGGCAGTaGCTCTCGGATGTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCAKGRQ*LSDVVG
Trigger: ACCAACCACATCCGAGAGTCACTGCCGACCCTTCGC...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTCTTGTACCAAGACAATaGCTCAGCTGTCAGCACGAA +
Preference number: 4 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWALVPRQ*LSCQHE
Trigger: TTCGTGCTGACAGCTGAGTCATTGTCTTGGTACAAG...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAGGGCCTCAGGAGCTGAAGGCGTCCTaGAGCTTGTTAACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LVGGLGEAPSFSLGAGPQELKAS*SLLTSG
Trigger: CCCGCTGGTTAACAAGCTGCAGGACGCCTTCAGCTC...CTGAGGCCCTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165766.9
CDS-3UTR GCA 90 bp TGTGGGCCTCCTCACCCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGGACCCGGTCAGTCTCTaGTTCGATCTCCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: CGPPHPSLSCPLGRGGKGDPVSL*FDLLPD
Trigger: GTCCGGCAGGAGATCGAAGCAGAGACTGACCGGGTC...CCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTGACCCGGTCAGTCTCTaGTTCGATCTCCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFDPVSL*FDLLPD
Trigger: GTCCGGCAGGAGATCGAAGCAGAGACTGACCGGGTC...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGTCTGCAAGTGTGGGGTaGCCATGCGGTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTSASVG*PCGQPC
Trigger: ACATGGCTGACCGCATGGGCACCCCACACTTGCAGA...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTGGCTCTGCAGCTTGCTaGGAAGGGTCGGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPGSAAC*EGSAVT
Trigger: AGTCACTGCCGACCCTTCGCAGCAAGCTGCAGAGCC...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGAAGGTGTTCTCTTGTaGTCCATCCTCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWEGVLL*SILILC
Trigger: GCAGAGAATGAGGATGGAGCACAAGAGAACACCTTC...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTACCAGGGGGAATCCGTaGTGGCCGAGATGGTATCTG +
Preference number: 4 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSTRGNP*WPRWYL
Trigger: CAGATACCATCTCGGCCAGCACGGATTCCCCCTGGT...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGCATGTGCCGGTAGGCTaGGTGGGAGAGGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLHVPVG*VGEEEF
Trigger: AAATTCTTCCTCTCCCACCCAGCCTACCGGCACATG...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGTTTTCTGCAAGTGTaGGGTGCCCATGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSGFLQV*GAHAVS
Trigger: GCTGACCGCATGGGCACCCCACACTTGCAGAAAACC...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGTCCAGGGACAGCAGTTaGCTCTGCAGCTTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLSRDSS*LCSLLR
Trigger: TCGCAGCAAGCTGCAGAGCCAACTGCTGTCCCTGGA...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCTGCCTGGTCCTTCTCTaGGTAGACCCCAGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSCLVLL*VDPSAQ
Trigger: CTGCGCGCTGGGGTCTACCCAGAGAAGGACCAGGCA...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGTGCATGATGGTCTTTaGCATAAGGTCACGGATGGA +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWVHDGL*HKVTDG
Trigger: TCCATCCGTGACCTTATGCCAAAGACCATCATGCAC...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGCGTGTCATCGACCGGTaGGGGCACGGGTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLRVIDR*GHGCGH
Trigger: GTGTCCACACCCGTGCCCCCACCGGTCGATGACACG...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTTGGCCGCTGGTGTTTTaGAGCCACGTGTCATCGACC +
Preference number: 4 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSWPLVF*SHVSST
Trigger: GGTCGATGACACGTGGCTCCAAAACACCAGCGGCCA...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAGGGCCTCAGGGCAAACACACTCTGTaGTCCAGGCCGGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: LVGGLGEAPSFSLGAGPQGKHTL*SRPGWD
Trigger: ATCCCATCCCGGCCTGGACCACAGAGTGTGTTTGCC...CTGAGGCCCTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCAGATGGTATCTGAGGTaGCGCAGAGAAGGGGTCGTT +
Preference number: 4 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGRWYLR*RREGVV
Trigger: AACGACCCCTTCTCTGCGCCACCTCAGATACCATCT...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTATGGAGGTGGTCGCCTaGGCACTCCTGGAGGGATAC +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFMEVVA*ALLEGY
Trigger: GTATCCCTCCAGGAGTGCCCAGGCGACCACCTCCAT...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTTCTGACCGATGGAGCTaGAGGCGTCCTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFSDRWS*RRPAAC
Trigger: ACAAGCTGCAGGACGCCTTCAGCTCCATCGGTCAGA...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165766.9
CDS-3UTR TCA 90 bp AGGTGTGACGGCAAGAATGAGGCTGCTCTCGCGGCTGATGAACTGCAGGATCATTCCAGGTGGCAGCTCTaGCCGATGGAGCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: RCDGKNEAALAADELQDHSRWQL*PMELKA
Trigger: CGCCTTCAGCTCCATCGGTCAGAGCTGCCACCTGGA...ATGATCCTGCAGTTCATCAGCCGCGAGAGCAGCCTCATTCTTGCCGTCACACCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174828.2
CDS-3UTR TCA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCAGTAGACCCGAAGGTTaGTGGGCACAGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCSRPEG*WAQGRC
Trigger: GCATCTCCCCTGTGCCCATCAACCTTCGGGTCTACT...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACTGCCTGGGAGGTCGATaGGGGTCAAGTTCAACACGT +
Preference number: 4 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHCLGGR*GSSSTR
Trigger: ACGTGTTGAACTTGACCCTCATCGACCTCCCAGGCA...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTTGCCTGGGAGGTCGATaGGGGTCAAGTTCAACACGT +
Preference number: 4 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSCLGGR*GSSSTR
Trigger: ACGTGTTGAACTTGACCCTCATCGACCTCCCAGGCA...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGCAGGATCATGTCCTTaGTCTGGTACTCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLAGSCP*SGTRCL
Trigger: CAGACATCGAGTACCAGATCAAGGACATGATCCTGC...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCAGCTTGAGGGCGTCTaGGTTGGCCAAGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHQLEGV*VGQVHV
Trigger: AACATGGACTTGGCCAACTCAGACGCCCTCAAGCTG...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGCAGCTTGAGGGCGTCTaGGTTGGCCAAGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLQLEGV*VGQVHV
Trigger: AACATGGACTTGGCCAACTCAGACGCCCTCAAGCTG...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGCCTCCTTGGCCAGCTTaGGGGCGTCTGAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLPPWPA*GRLSWP
Trigger: TGGCCAACTCAGACGCCCTCAAGCTGGCCAAGGAGG...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGCGAAGGGTCGGCAGTaGCTCTCGGATGTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCAKGRQ*LSDVVG
Trigger: ACCAACCACATCCGAGAGTCACTGCCGACCCTTCGC...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCTTGGAAAAGATGAGCTaGAGAATGAGAGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGLEKMS*RMRGLR
Trigger: CCGGAGGCCTCTCATTCTGCAGCTCATCTTTTCCAA...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp GAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTCGCGGCTGATGAACTaGAGGATCATGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: ERKEPWPLGPEGSQLVGGSRLMN*RIMSLI
Trigger: GATCAAGGACATGATCCTGCAGTTCATCAGCCGCGA...ACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGAGTGTGGGGTGCCCATaGGGTCAGCCATGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLSVGCP*GQPCAG
Trigger: ACCGGCACATGGCTGACCGCATGGGCACCCCACACT...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTTCTGCAAGTGTGGGGTaGCCATGCGGTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPSASVG*PCGQPC
Trigger: ACATGGCTGACCGCATGGGCACCCCACACTTGCAGA...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGCTCTGCAGCTTGCTaGGAAGGGTCGGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCGSAAC*EGSAVT
Trigger: AGTCACTGCCGACCCTTCGCAGCAAGCTGCAGAGCC...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACAGCTGCGTGCTCCTCTaGTGGGCATTGGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHSCVLL*WALANP
Trigger: TGGATTTGCCAATGCCCAGCAGAGGAGCACGCAGCT...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGAGCTGCGTGCTCCTCTaGTGGGCATTGGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGSCVLL*WALANP
Trigger: TGGATTTGCCAATGCCCAGCAGAGGAGCACGCAGCT...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTCACCTTAGTGATGCCTaGGAGGTCGATGAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: KEGALAPWPRGEPASRWFHLSDA*EVDEGQ
Trigger: TTGACCCTCATCGACCTCCCAGGCATCACTAAGGTG...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGATCATGTCCTTGATCTaGTACTCGATGTCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLIMSLI*YSMSGG
Trigger: GCCGCCAGACATCGAGTACCAGATCAAGGACATGAT...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp TGTGGGCCTCCTCACCCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGTCCAGGGACAGCAGTTaGCTCTGCAGCTTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: CGPPHPSLSCPLGRGGKGSRDSS*LCSLLR
Trigger: TCGCAGCAAGCTGCAGAGCCAACTGCTGTCCCTGGA...CCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGTGCCTGGTCCTTCTCTaGGTAGACCCCAGCGCGCAG +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLCLVLL*VDPSAQ
Trigger: CTGCGCGCTGGGGTCTACCCAGAGAAGGACCAGGCA...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGCCAGCTGCGGGTCCATaGAGAAGGTGTTCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLPAAGP*RRCSLV
Trigger: CACAAGAGAACACCTTCTCCATGGACCCGCAGCTGG...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAGGGCCTCAGCCAGCTGCGGGTCCATaGAGAAGGTGTTCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LVGGLGEAPSFSLGAGPQPAAGP*RRCSLV
Trigger: CACAAGAGAACACCTTCTCCATGGACCCGCAGCTGG...CTGAGGCCCTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCCTTCCACCAGGTTACGGATaGTCTCCACCTGTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LIPKCKAPMCCAVGLLTLPPGYG*SPPVAP
Trigger: TGGAGCGACAGGTGGAGACCATCCGTAACCTGGTGG...AAGGGTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCACCAGGTTACGGATaGTCTCCACCTGTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPPPGYG*SPPVAP
Trigger: TGGAGCGACAGGTGGAGACCATCCGTAACCTGGTGG...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTCCACCAGGTTACGGATaGTCTCCACCTGTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFPPGYG*SPPVAP
Trigger: TGGAGCGACAGGTGGAGACCATCCGTAACCTGGTGG...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGCCAGCAGCTCATGGTaGATGAAGGCCTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: KEGALAPWPRGEPASRWFASSSW*MKAFVL
Trigger: CAACACAAAGGCCTTCATCCACCATGAGCTGCTGGC...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp TGTGGGCCTCCTCACCCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGTGGCCGCTGGTGTTTTaGAGCCACGTGTCATCGACC +
Preference number: 4 (lower is better)
Translates to: CGPPHPSLSCPLGRGGKGWPLVF*SHVSST
Trigger: GGTCGATGACACGTGGCTCCAAAACACCAGCGGCCA...CCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TGTGGGCCTCCTCACCCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGGGCAAACACACTCTGTaGTCCAGGCCGGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: CGPPHPSLSCPLGRGGKGGKHTL*SRPGWD
Trigger: ATCCCATCCCGGCCTGGACCACAGAGTGTGTTTGCC...CCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp GAGTTGGCCAAGTCCATGTTGGCAGGTGTGACGGCAAGAATGAGGCTGCTCTCGTCTGACCGATGGAGCTaGAGGCGTCCTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: ELAKSMLAGVTARMRLLSSDRWS*RRPAAC
Trigger: ACAAGCTGCAGGACGCCTTCAGCTCCATCGGTCAGA...CGAGAGCAGCCTCATTCTTGCCGTCACACCTGCCAACATGGACTTGGCCAACTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174828.2
CDS-3UTR TCA 90 bp CTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCCTTCCGGGTGACAATTCCTaGTCCTCGTGGAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LIPKCKAPMCCAVGLLTLPGDNS*SSWKEV
Trigger: GACTTCCTTCCACGAGGATCAGGAATTGTCACCCGG...AAGGGTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCCCGGGTGACAATTCCTaGTCCTCGTGGAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCPGDNS*SSWKEV
Trigger: GACTTCCTTCCACGAGGATCAGGAATTGTCACCCGG...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTCCGGGTGACAATTCCTaGTCCTCGTGGAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFPGDNS*SSWKEV
Trigger: GACTTCCTTCCACGAGGATCAGGAATTGTCACCCGG...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp CTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCCTTCAGCTTGAGGGCGTCTaGGTTGGCCAAGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: LIPKCKAPMCCAVGLLTLQLEGV*VGQVHV
Trigger: AACATGGACTTGGCCAACTCAGACGCCCTCAAGCTG...AAGGGTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTCAGCTTGAGGGCGTCTaGGTTGGCCAAGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFQLEGV*VGQVHV
Trigger: AACATGGACTTGGCCAACTCAGACGCCCTCAAGCTG...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTAAGGGAAAGCGCTCATaGAAGATACGATTGATGCGG +
Preference number: 4 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGKGKRS*KIRLMR
Trigger: CCGCATCAATCGTATCTTTCATGAGCGCTTTCCCTT...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTCTTCATGGTTTGTGTTaGTGTACGACTGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWALHGLC*CTTAQC
Trigger: ACATTGAGCAGTCGTACATCAACACAAACCATGAAG...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp GAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTCTTGTACCAAGACAATaGCTCAGCTGTCAGCACGAA +
Preference number: 4 (lower is better)
Translates to: ERKEPWPLGPEGSQLVGGLVPRQ*LSCQHE
Trigger: TTCGTGCTGACAGCTGAGTCATTGTCTTGGTACAAG...ACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACGAGCTGAAGGCGTCCTaGAGCTTGTTAACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHELKAS*SLLTSG
Trigger: CCCGCTGGTTAACAAGCTGCAGGACGCCTTCAGCTC...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp GAGTTGGCCAAGTCCATGTTGGCAGGTGTGACGGCAAGAATGAGGCTGCTCTCGGAGCTGAAGGCGTCCTaGAGCTTGTTAACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: ELAKSMLAGVTARMRLLSELKAS*SLLTSG
Trigger: CCCGCTGGTTAACAAGCTGCAGGACGCCTTCAGCTC...CGAGAGCAGCCTCATTCTTGCCGTCACACCTGCCAACATGGACTTGGCCAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174828.2
CDS-3UTR GCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGACCCGGTCAGTCTCTaGTTCGATCTCCTGCCGGAC +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLDPVSL*FDLLPD
Trigger: GTCCGGCAGGAGATCGAAGCAGAGACTGACCGGGTC...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGCCCGGATGTCCTTTTTaGCCTCGATGTCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLPGCPF*PRCLSG
Trigger: GCCAGAAAGACATCGAGGGCAAAAAGGACATCCGGG...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTCCCGGATGTCCTTTTTaGCCTCGATGTCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSPGCPF*PRCLSG
Trigger: GCCAGAAAGACATCGAGGGCAAAAAGGACATCCGGG...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTTCTGCAAGTGTGGGGTaGCCATGCGGTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCSASVG*PCGQPC
Trigger: ACATGGCTGACCGCATGGGCACCCCACACTTGCAGA...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGTGGTTCAGGGTTTTCTaGAAGTGTGGGGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLWFRVF*KCGVPM
Trigger: CATGGGCACCCCACACTTGCAGAAAACCCTGAACCA...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp GAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTATGTGGTTGGTCAGTTaGTGGTTCAGGGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ERKEPWPLGPEGSQLVGGMWLVS*WFRVFC
Trigger: GCAGAAAACCCTGAACCAGCAACTGACCAACCACAT...ACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp TCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCAAGCTGCGTGCTCCTCTaGTGGGCATTGGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: SSSSQSAKPPCAVLWASSSCVLL*WALANP
Trigger: TGGATTTGCCAATGCCCAGCAGAGGAGCACGCAGCT...TGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCAGCTGCGTGCTCCTCTaGTGGGCATTGGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCSCVLL*WALANP
Trigger: TGGATTTGCCAATGCCCAGCAGAGGAGCACGCAGCT...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTAGCTGCGTGCTCCTCTaGTGGGCATTGGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFSCVLL*WALANP
Trigger: TGGATTTGCCAATGCCCAGCAGAGGAGCACGCAGCT...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCGAAGGTGTTCTCTTGTaGTCCATCCTCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGEGVLL*SILILC
Trigger: GCAGAGAATGAGGATGGAGCACAAGAGAACACCTTC...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCACCAGGGGGAATCCGTaGTGGCCGAGATGGTATCTG +
Preference number: 4 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSTRGNP*WPRWYL
Trigger: CAGATACCATCTCGGCCAGCACGGATTCCCCCTGGT...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGCACCTTAGTGATGCCTaGGAGGTCGATGAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTHLSDA*EVDEGQ
Trigger: TTGACCCTCATCGACCTCCCAGGCATCACTAAGGTG...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTCACCTTAGTGATGCCTaGGAGGTCGATGAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSHLSDA*EVDEGQ
Trigger: TTGACCCTCATCGACCTCCCAGGCATCACTAAGGTG...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp GGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTCATGTGCCGGTAGGCTaGGTGGGAGAGGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: GAGPQRRLAHEPQGTEGIHVPVG*VGEEEF
Trigger: AAATTCTTCCTCTCCCACCCAGCCTACCGGCACATG...AATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGTTTTCTGCAAGTGTaGGGTGCCCATGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCGFLQV*GAHAVS
Trigger: GCTGACCGCATGGGCACCCCACACTTGCAGAAAACC...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTTGGTTGGTCAGTTGCTaGTTCAGGGTTTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGWLVSC*FRVFCK
Trigger: CTTGCAGAAAACCCTGAACCAGCAACTGACCAACCA...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTGGTTGGTCAGTTGCTaGTTCAGGGTTTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: ERKEPWPLGPEGSQLVGGWLVSC*FRVFCK
Trigger: CTTGCAGAAAACCCTGAACCAGCAACTGACCAACCA...ACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCTTTGGTCTTGCGCGTaGGGTCATCAGGCCGGAAAT +
Preference number: 4 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPLWSCA*GHQAGN
Trigger: ATTTCCGGCCTGATGACCCCACGCGCAAGACCAAAG...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTCTTTGGTCTTGCGCGTaGGGTCATCAGGCCGGAAAT +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFLWSCA*GHQAGN
Trigger: ATTTCCGGCCTGATGACCCCACGCGCAAGACCAAAG...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGGAAGAATCTGGTCCTTaGTTCTCCCTTCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGEESGP*FSLLAP
Trigger: GGGAGCGAGAAGGGAGAACCAAGGACCAGATTCTTC...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCCCCCTGATTGGGTATaGCCCTCTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHPPDWV*PSSCSA
Trigger: AGCTGAACAAGAAGAGGGCCATACCCAATCAGGGGG...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000072362.14
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGCCCCCTGATTGGGTATaGCCCTCTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGPPDWV*PSSCSA
Trigger: AGCTGAACAAGAAGAGGGCCATACCCAATCAGGGGG...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165766.9
CDS-3UTR CCA 90 bp CTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCCTTCCAGCTGCGGGTCCATaGAGAAGGTGTTCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LIPKCKAPMCCAVGLLTLPAAGP*RRCSLV
Trigger: CACAAGAGAACACCTTCTCCATGGACCCGCAGCTGG...AAGGGTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCGTGCATGATGGTCTTTaGCATAAGGTCACGGATGGA +
Preference number: 4 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGVHDGL*HKVTDG
Trigger: TCCATCCGTGACCTTATGCCAAAGACCATCATGCAC...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGGCCAGCAGCTCATGGTaGATGAAGGCCTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGASSSW*MKAFVL
Trigger: CAACACAAAGGCCTTCATCCACCATGAGCTGCTGGC...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTTCCATGAGGCTGCTCTaGTCTGCTGATGAATACAGG +
Preference number: 4 (lower is better)
Translates to: KEGALAPWPRGEPASRWFSMRLL*SADEYR
Trigger: CCTGTATTCATCAGCAGACCAGAGCAGCCTCATGGA...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGCAAACACACTCTGTaGTCCAGGCCGGGATGGGAT +
Preference number: 4 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCGKHTL*SRPGWD
Trigger: ATCCCATCCCGGCCTGGACCACAGAGTGTGTTTGCC...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTAGATGGTATCTGAGGTaGCGCAGAGAAGGGGTCGTT +
Preference number: 4 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSRWYLR*RREGVV
Trigger: AACGACCCCTTCTCTGCGCCACCTCAGATACCATCT...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTTCACCTGATTGGGTATaGCCCTCTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGSPDWV*PSSCSA
Trigger: AGCTGAACAAGAAGAGGGCCATACCCAATCAGGTGA...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091087.13
CDS-3UTR CCA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGTCACCTGATTGGGTATaGCCCTCTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLSPDWV*PSSCSA
Trigger: AGCTGAACAAGAAGAGGGCCATACCCAATCAGGTGA...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174050.8
3UTR CAA 72 bp ACCCGAAGGTTGATGGGCACAGGGGAGATGCCTTTGTaGGTGCCTGTGACCCGGTCAGTCTCTGCTTCGATC +
Preference number: 4 (lower is better)
Translates to: TRRLMGTGEMPL*VPVTRSVSASI
Trigger: GATCGAAGCAGAGACTGACCGGGTCACAGGCACCAACAAAGGCATCTCCCCTGTGCCCATCAACCTTCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174828.2
CDS-3UTR TCA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTCCGGGTGACAATTCCTaGTCCTCGTGGAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCPGDNS*SSWKEV
Trigger: GACTTCCTTCCACGAGGATCAGGAATTGTCACCCGG...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCCCGGGTGACAATTCCTaGTCCTCGTGGAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSPGDNS*SSWKEV
Trigger: GACTTCCTTCCACGAGGATCAGGAATTGTCACCCGG...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACTGCCTGGGAGGTCGATaGGGGTCAAGTTCAACACGT +
Preference number: 4 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHCLGGR*GSSSTR
Trigger: ACGTGTTGAACTTGACCCTCATCGACCTCCCAGGCA...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGGCAGGATCATGTCCTTaGTCTGGTACTCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTAGSCP*SGTRCL
Trigger: CAGACATCGAGTACCAGATCAAGGACATGATCCTGC...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTAAGGGAAAGCGCTCATaGAAGATACGATTGATGCGG +
Preference number: 4 (lower is better)
Translates to: KEGALAPWPRGEPASRWFKGKRS*KIRLMR
Trigger: CCGCATCAATCGTATCTTTCATGAGCGCTTTCCCTT...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTCATTGGCAAATCCAATaGAGTCTTCATGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWAHWQIQ*SLHGLC
Trigger: ACACAAACCATGAAGACTTCATTGGATTTGCCAATG...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTTGGAAAAGATGAGCTaGAGAATGAGAGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGLEKMS*RMRGLR
Trigger: CCGGAGGCCTCTCATTCTGCAGCTCATCTTTTCCAA...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGTTGGAAAAGATGAGCTaGAGAATGAGAGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTLEKMS*RMRGLR
Trigger: CCGGAGGCCTCTCATTCTGCAGCTCATCTTTTCCAA...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAGGGCCTCAGTCGCGGCTGATGAACTaGAGGATCATGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: LVGGLGEAPSFSLGAGPQSRLMN*RIMSLI
Trigger: GATCAAGGACATGATCCTGCAGTTCATCAGCCGCGA...CTGAGGCCCTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGTCGCGGCTGATGAACTaGAGGATCATGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTSRLMN*RIMSLI
Trigger: GATCAAGGACATGATCCTGCAGTTCATCAGCCGCGA...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp TGTGGGCCTCCTCACCCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCCCGGATGTCCTTTTTaGCCTCGATGTCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: CGPPHPSLSCPLGRGGKGPGCPF*PRCLSG
Trigger: GCCAGAAAGACATCGAGGGCAAAAAGGACATCCGGG...CCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp TCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCATGGTTCAGGGTTTTCTaGAAGTGTGGGGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: SSSSQSAKPPCAVLWASSWFRVF*KCGVPM
Trigger: CATGGGCACCCCACACTTGCAGAAAACCCTGAACCA...TGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp TGTGGGCCTCCTCACCCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGTGGTTCAGGGTTTTCTaGAAGTGTGGGGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: CGPPHPSLSCPLGRGGKGWFRVF*KCGVPM
Trigger: CATGGGCACCCCACACTTGCAGAAAACCCTGAACCA...CCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTTGGTTCAGGGTTTTCTaGAAGTGTGGGGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFWFRVF*KCGVPM
Trigger: CATGGGCACCCCACACTTGCAGAAAACCCTGAACCA...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGTGTTGATGTACGACTaGTCAATGTCAATCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWVLMYD*SMSIRR
Trigger: TCTTCTGATTGACATTGAGCAGTCGTACATCAACAC...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGTCCATCCTCATTCTCTaGCTGGTCCTTCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTSILIL*LVLLWV
Trigger: TACCCAGAGAAGGACCAGGCAGAGAATGAGGATGGA...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAGGGCCTCAGTCCATCCTCATTCTCTaGCTGGTCCTTCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LVGGLGEAPSFSLGAGPQSILIL*LVLLWV
Trigger: TACCCAGAGAAGGACCAGGCAGAGAATGAGGATGGA...CTGAGGCCCTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTTCCATCCTCATTCTCTaGCTGGTCCTTCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSSILIL*LVLLWV
Trigger: TACCCAGAGAAGGACCAGGCAGAGAATGAGGATGGA...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGACCAGGGGGAATCCGTaGTGGCCGAGATGGTATCTG +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLTRGNP*WPRWYL
Trigger: CAGATACCATCTCGGCCAGCACGGATTCCCCCTGGT...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCCACCTTAGTGATGCCTaGGAGGTCGATGAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCHLSDA*EVDEGQ
Trigger: TTGACCCTCATCGACCTCCCAGGCATCACTAAGGTG...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACACCTTAGTGATGCCTaGGAGGTCGATGAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: SSSSQSAKPPCAVLWASSHLSDA*EVDEGQ
Trigger: TTGACCCTCATCGACCTCCCAGGCATCACTAAGGTG...TGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGATCATGTCCTTGATCTaGTACTCGATGTCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLIMSLI*YSMSGG
Trigger: GCCGCCAGACATCGAGTACCAGATCAAGGACATGAT...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGGTTTTCTGCAAGTGTaGGGTGCCCATGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLGFLQV*GAHAVS
Trigger: GCTGACCGCATGGGCACCCCACACTTGCAGAAAACC...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGTCCAGGGACAGCAGTTaGCTCTGCAGCTTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLSRDSS*LCSLLR
Trigger: TCGCAGCAAGCTGCAGAGCCAACTGCTGTCCCTGGA...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACCTTTGGTCTTGCGCGTaGGGTCATCAGGCCGGAAAT +
Preference number: 4 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHLWSCA*GHQAGN
Trigger: ATTTCCGGCCTGATGACCCCACGCGCAAGACCAAAG...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCGAAGAATCTGGTCCTTaGTTCTCCCTTCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCEESGP*FSLLAP
Trigger: GGGAGCGAGAAGGGAGAACCAAGGACCAGATTCTTC...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTGAAGAATCTGGTCCTTaGTTCTCCCTTCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFEESGP*FSLLAP
Trigger: GGGAGCGAGAAGGGAGAACCAAGGACCAGATTCTTC...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACCCAGCTGCGGGTCCATaGAGAAGGTGTTCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHPAAGP*RRCSLV
Trigger: CACAAGAGAACACCTTCTCCATGGACCCGCAGCTGG...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTTCCATGAGGCTGCTCTaGTCTGCTGATGAATACAGG +
Preference number: 4 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSSMRLL*SADEYR
Trigger: CCTGTATTCATCAGCAGACCAGAGCAGCCTCATGGA...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTGCAGGATCATGTCCTTaGTCTGGTACTCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFAGSCP*SGTRCL
Trigger: CAGACATCGAGTACCAGATCAAGGACATGATCCTGC...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp TCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCAGCAGGATCATGTCCTTaGTCTGGTACTCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: SSSSQSAKPPCAVLWASSAGSCP*SGTRCL
Trigger: CAGACATCGAGTACCAGATCAAGGACATGATCCTGC...TGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGCAGCTTGAGGGCGTCTaGGTTGGCCAAGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLQLEGV*VGQVHV
Trigger: AACATGGACTTGGCCAACTCAGACGCCCTCAAGCTG...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAGGGCCTCAGAAGGGAAAGCGCTCATaGAAGATACGATTGATGCGG +
Preference number: 4 (lower is better)
Translates to: LVGGLGEAPSFSLGAGPQKGKRS*KIRLMR
Trigger: CCGCATCAATCGTATCTTTCATGAGCGCTTTCCCTT...CTGAGGCCCTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp GAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTCTTCATGGTTTGTGTTaGTGTACGACTGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: ERKEPWPLGPEGSQLVGGLHGLC*CTTAQC
Trigger: ACATTGAGCAGTCGTACATCAACACAAACCATGAAG...ACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGCTTGTACCAAGACAATaGCTCAGCTGTCAGCACGAA +
Preference number: 4 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLLVPRQ*LSCQHE
Trigger: TTCGTGCTGACAGCTGAGTCATTGTCTTGGTACAAG...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTTTGGAAAAGATGAGCTaGAGAATGAGAGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPLEKMS*RMRGLR
Trigger: CCGGAGGCCTCTCATTCTGCAGCTCATCTTTTCCAA...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp TCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCATCGCGGCTGATGAACTaGAGGATCATGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: SSSSQSAKPPCAVLWASSSRLMN*RIMSLI
Trigger: GATCAAGGACATGATCCTGCAGTTCATCAGCCGCGA...TGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTTGGTTCAGGGTTTTCTaGAAGTGTGGGGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCWFRVF*KCGVPM
Trigger: CATGGGCACCCCACACTTGCAGAAAACCCTGAACCA...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAGGGCCTCAGATGTGGTTGGTCAGTTaGTGGTTCAGGGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LVGGLGEAPSFSLGAGPQMWLVS*WFRVFC
Trigger: GCAGAAAACCCTGAACCAGCAACTGACCAACCACAT...CTGAGGCCCTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGAGCTGCGTGCTCCTCTaGTGGGCATTGGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLSCVLL*WALANP
Trigger: TGGATTTGCCAATGCCCAGCAGAGGAGCACGCAGCT...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACAAGATGGCAAACACGTaGTTGTTGGACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHKMANT*LLDMKP
Trigger: GGGCTTCATGTCCAACAAGCACGTGTTTGCCATCTT...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGAAGATGGCAAACACGTaGTTGTTGGACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTKMANT*LLDMKP
Trigger: GGGCTTCATGTCCAACAAGCACGTGTTTGCCATCTT...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTTCCATCCTCATTCTCTaGCTGGTCCTTCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPSILIL*LVLLWV
Trigger: TACCCAGAGAAGGACCAGGCAGAGAATGAGGATGGA...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAGGGCCTCAGGAAGGTGTTCTCTTGTaGTCCATCCTCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LVGGLGEAPSFSLGAGPQEGVLL*SILILC
Trigger: GCAGAGAATGAGGATGGAGCACAAGAGAACACCTTC...CTGAGGCCCTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCCATGTGCCGGTAGGCTaGGTGGGAGAGGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSHVPVG*VGEEEF
Trigger: AAATTCTTCCTCTCCCACCCAGCCTACCGGCACATG...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTCATGTGCCGGTAGGCTaGGTGGGAGAGGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCHVPVG*VGEEEF
Trigger: AAATTCTTCCTCTCCCACCCAGCCTACCGGCACATG...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCGAAGAATCTGGTCCTTaGTTCTCCCTTCTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSEESGP*FSLLAP
Trigger: GGGAGCGAGAAGGGAGAACCAAGGACCAGATTCTTC...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGCCAGCTGCGGGTCCATaGAGAAGGTGTTCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLPAAGP*RRCSLV
Trigger: CACAAGAGAACACCTTCTCCATGGACCCGCAGCTGG...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGCCAGCAGCTCATGGTaGATGAAGGCCTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCASSSW*MKAFVL
Trigger: CAACACAAAGGCCTTCATCCACCATGAGCTGCTGGC...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCATCCATGAGGCTGCTCTaGTCTGCTGATGAATACAGG +
Preference number: 4 (lower is better)
Translates to: SSSSQSAKPPCAVLWASSSMRLL*SADEYR
Trigger: CCTGTATTCATCAGCAGACCAGAGCAGCCTCATGGA...TGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTTCCATGAGGCTGCTCTaGTCTGCTGATGAATACAGG +
Preference number: 4 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPSMRLL*SADEYR
Trigger: CCTGTATTCATCAGCAGACCAGAGCAGCCTCATGGA...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACCGTGTCATCGACCGGTaGGGGCACGGGTGTGGACAC +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYRVIDR*GHGCGH
Trigger: GTGTCCACACCCGTGCCCCCACCGGTCGATGACACG...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGCAGGGACGGCTCGGCTaGGCGGATAATGGTGGGCCG +
Preference number: 4 (lower is better)
Translates to: NMAKGALYIQLEPGGSALQGRLG*ADNGGP
Trigger: CGGCCCACCATTATCCGCCCAGCCGAGCCGTCCCTG...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACTCCAGGTGGCAGCTCTaGCCGATGGAGCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYSRWQL*PMELKA
Trigger: CGCCTTCAGCTCCATCGGTCAGAGCTGCCACCTGGA...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGCAGGATCATGTCCTTaGTCTGGTACTCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCAGSCP*SGTRCL
Trigger: CAGACATCGAGTACCAGATCAAGGACATGATCCTGC...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCGCAGGATCATGTCCTTaGTCTGGTACTCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSAGSCP*SGTRCL
Trigger: CAGACATCGAGTACCAGATCAAGGACATGATCCTGC...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTCATTGGCAAATCCAATaGAGTCTTCATGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGHWQIQ*SLHGLC
Trigger: ACACAAACCATGAAGACTTCATTGGATTTGCCAATG...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACAGTGTGGGGTGCCCATaGGGTCAGCCATGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYSVGCP*GQPCAG
Trigger: ACCGGCACATGGCTGACCGCATGGGCACCCCACACT...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCCTTATGTGGTTGGTCAGTTaGTGGTTCAGGGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LIPKCKAPMCCAVGLLTLMWLVS*WFRVFC
Trigger: GCAGAAAACCCTGAACCAGCAACTGACCAACCACAT...AAGGGTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGTGTTGATGTACGACTaGTCAATGTCAATCAGAAGA +
Preference number: 4 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGVLMYD*SMSIRR
Trigger: TCTTCTGATTGACATTGAGCAGTCGTACATCAACAC...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTAAGATGGCAAACACGTaGTTGTTGGACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFKMANT*LLDMKP
Trigger: GGGCTTCATGTCCAACAAGCACGTGTTTGCCATCTT...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp TGTGGGCCTCCTCACCCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGGAAGGTGTTCTCTTGTaGTCCATCCTCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: CGPPHPSLSCPLGRGGKGEGVLL*SILILC
Trigger: GCAGAGAATGAGGATGGAGCACAAGAGAACACCTTC...CCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACATCATGTCCTTGATCTaGTACTCGATGTCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHIMSLI*YSMSGG
Trigger: GCCGCCAGACATCGAGTACCAGATCAAGGACATGAT...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGCATGTGCCGGTAGGCTaGGTGGGAGAGGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLHVPVG*VGEEEF
Trigger: AAATTCTTCCTCTCCCACCCAGCCTACCGGCACATG...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TGTGGGCCTCCTCACCCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGTGGTTGGTCAGTTGCTaGTTCAGGGTTTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: CGPPHPSLSCPLGRGGKGWLVSC*FRVFCK
Trigger: CTTGCAGAAAACCCTGAACCAGCAACTGACCAACCA...CCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTTGGTTGGTCAGTTGCTaGTTCAGGGTTTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFWLVSC*FRVFCK
Trigger: CTTGCAGAAAACCCTGAACCAGCAACTGACCAACCA...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTATCAGAAGAAGAATCTaGTCCTTGGTTCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KEGALAPWPRGEPASRWFIRRRI*SLVLPS
Trigger: AGAAGGGAGAACCAAGGACCAGATTCTTCTTCTGAT...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCCTTGTGCATGATGGTCTTTaGCATAAGGTCACGGATGGA +
Preference number: 4 (lower is better)
Translates to: LIPKCKAPMCCAVGLLTLVHDGL*HKVTDG
Trigger: TCCATCCGTGACCTTATGCCAAAGACCATCATGCAC...AAGGGTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACCGGGCGCTCTTCTGCTaGGCACTCCTGGAGGGATAC +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYRALFC*ALLEGY
Trigger: GTATCCCTCCAGGAGTGCCCAGCAGAAGAGCGCCCG...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
CDS-3UTR TCA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCAAGGGAAAGCGCTCATaGAAGATACGATTGATGCGG +
Preference number: 4 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSKGKRS*KIRLMR
Trigger: CCGCATCAATCGTATCTTTCATGAGCGCTTTCCCTT...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGCTTCATGGTTTGTGTTaGTGTACGACTGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGLHGLC*CTTAQC
Trigger: ACATTGAGCAGTCGTACATCAACACAAACCATGAAG...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR TCA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCCTTGTACCAAGACAATaGCTCAGCTGTCAGCACGAA +
Preference number: 4 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSLVPRQ*LSCQHE
Trigger: TTCGTGCTGACAGCTGAGTCATTGTCTTGGTACAAG...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACCTTGTACCAAGACAATaGCTCAGCTGTCAGCACGAA +
Preference number: 4 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHLVPRQ*LSCQHE
Trigger: TTCGTGCTGACAGCTGAGTCATTGTCTTGGTACAAG...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGAGTGTGGGGTGCCCATaGGGTCAGCCATGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: NMAKGALYIQLEPGGSALSVGCP*GQPCAG
Trigger: ACCGGCACATGGCTGACCGCATGGGCACCCCACACT...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACATGTGGTTGGTCAGTTaGTGGTTCAGGGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHMWLVS*WFRVFC
Trigger: GCAGAAAACCCTGAACCAGCAACTGACCAACCACAT...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCAAGATGGCAAACACGTaGTTGTTGGACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSKMANT*LLDMKP
Trigger: GGGCTTCATGTCCAACAAGCACGTGTTTGCCATCTT...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGTCCATCCTCATTCTCTaGCTGGTCCTTCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLSILIL*LVLLWV
Trigger: TACCCAGAGAAGGACCAGGCAGAGAATGAGGATGGA...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGATCATGTCCTTGATCTaGTACTCGATGTCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLIMSLI*YSMSGG
Trigger: GCCGCCAGACATCGAGTACCAGATCAAGGACATGAT...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACTGGTTGGTCAGTTGCTaGTTCAGGGTTTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHWLVSC*FRVFCK
Trigger: CTTGCAGAAAACCCTGAACCAGCAACTGACCAACCA...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTTGGTTGGTCAGTTGCTaGTTCAGGGTTTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCWLVSC*FRVFCK
Trigger: CTTGCAGAAAACCCTGAACCAGCAACTGACCAACCA...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGATCAGAAGAAGAATCTaGTCCTTGGTTCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTIRRRI*SLVLPS
Trigger: AGAAGGGAGAACCAAGGACCAGATTCTTCTTCTGAT...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTATCAGAAGAAGAATCTaGTCCTTGGTTCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSIRRRI*SLVLPS
Trigger: AGAAGGGAGAACCAAGGACCAGATTCTTCTTCTGAT...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CCA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGTGCATGATGGTCTTTaGCATAAGGTCACGGATGGA +
Preference number: 4 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCVHDGL*HKVTDG
Trigger: TCCATCCGTGACCTTATGCCAAAGACCATCATGCAC...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGACCCTGATTGGGTATaGCCCTCTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLDPDWV*PSSCSA
Trigger: AGCTGAACAAGAAGAGGGCCATACCCAATCAGGGTC...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115404.11
CDS-3UTR TCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACAGTAGACCCGAAGGTTaGTGGGCACAGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYSRPEG*WAQGRC
Trigger: GCATCTCCCCTGTGCCCATCAACCTTCGGGTCTACT...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACCCTCCTTGGCCAGCTTaGGGGCGTCTGAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHPPWPA*GRLSWP
Trigger: TGGCCAACTCAGACGCCCTCAAGCTGGCCAAGGAGG...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp TCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACTTCATGGTTTGTGTTaGTGTACGACTGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: SSSSQSAKPPCAVLWASSLHGLC*CTTAQC
Trigger: ACATTGAGCAGTCGTACATCAACACAAACCATGAAG...TGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCCTTCATGGTTTGTGTTaGTGTACGACTGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCLHGLC*CTTAQC
Trigger: ACATTGAGCAGTCGTACATCAACACAAACCATGAAG...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCATTGGCAAATCCAATaGAGTCTTCATGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHHWQIQ*SLHGLC
Trigger: ACACAAACCATGAAGACTTCATTGGATTTGCCAATG...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTCATTGGCAAATCCAATaGAGTCTTCATGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSHWQIQ*SLHGLC
Trigger: ACACAAACCATGAAGACTTCATTGGATTTGCCAATG...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACGAGCTGAAGGCGTCCTaGAGCTTGTTAACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYELKAS*SLLTSG
Trigger: CCCGCTGGTTAACAAGCTGCAGGACGCCTTCAGCTC...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGTTTTTGGACTTGCAGTaGAAAAATTCCGCATATTCT +
Preference number: 4 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLFLDLQ*KNSAYS
Trigger: AGAATATGCGGAATTTTTGCACTGCAAGTCCAAAAA...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTTTTTTGGACTTGCAGTaGAAAAATTCCGCATATTCT +
Preference number: 4 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGFLDLQ*KNSAYS
Trigger: AGAATATGCGGAATTTTTGCACTGCAAGTCCAAAAA...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCTTTTTGGACTTGCAGTaGAAAAATTCCGCATATTCT +
Preference number: 4 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGFLDLQ*KNSAYS
Trigger: AGAATATGCGGAATTTTTGCACTGCAAGTCCAAAAA...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGGTGTTGATGTACGACTaGTCAATGTCAATCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGVLMYD*SMSIRR
Trigger: TCTTCTGATTGACATTGAGCAGTCGTACATCAACAC...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGAAGGTGTTCTCTTGTaGTCCATCCTCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLEGVLL*SILILC
Trigger: GCAGAGAATGAGGATGGAGCACAAGAGAACACCTTC...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCAATCAGAAGAAGAATCTaGTCCTTGGTTCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSSSQSAKPPCAVLWASSIRRRI*SLVLPS
Trigger: AGAAGGGAGAACCAAGGACCAGATTCTTCTTCTGAT...TGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACCGGGCGCTCTTCTGCTaGGCACTCCTGGAGGGATAC +
Preference number: 4 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHRALFC*ALLEGY
Trigger: GTATCCCTCCAGGAGTGCCCAGCAGAAGAGCGCCCG...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
CDS-3UTR CCA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACCAGCGGGCGCTCTTCTaGGCACTCCTGGAGGGATAC +
Preference number: 4 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHQRALF*ALLEGY
Trigger: GTATCCCTCCAGGAGTGCCCAGAAGAGCGCCCGCTG...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACGCGAAGGGTCGGCAGTaGCTCTCGGATGTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHAKGRQ*LSDVVG
Trigger: ACCAACCACATCCGAGAGTCACTGCCGACCCTTCGC...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCCTTCATGGTTTGTGTTaGTGTACGACTGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSLHGLC*CTTAQC
Trigger: ACATTGAGCAGTCGTACATCAACACAAACCATGAAG...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTCATTGGCAAATCCAATaGAGTCTTCATGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFHWQIQ*SLHGLC
Trigger: ACACAAACCATGAAGACTTCATTGGATTTGCCAATG...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTGTGTTGATGTACGACTaGTCAATGTCAATCAGAAGA +
Preference number: 4 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFVLMYD*SMSIRR
Trigger: TCTTCTGATTGACATTGAGCAGTCGTACATCAACAC...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR GCA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGACCAGGGGGAATCCGTaGTGGCCGAGATGGTATCTG +
Preference number: 4 (lower is better)
Translates to: NMAKGALYIQLEPGGSALTRGNP*WPRWYL
Trigger: CAGATACCATCTCGGCCAGCACGGATTCCCCCTGGT...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGTCCAGGGACAGCAGTTaGCTCTGCAGCTTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: NMAKGALYIQLEPGGSALSRDSS*LCSLLR
Trigger: TCGCAGCAAGCTGCAGAGCCAACTGCTGTCCCTGGA...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACCTTTGGTCTTGCGCGTaGGGTCATCAGGCCGGAAAT +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYLWSCA*GHQAGN
Trigger: ATTTCCGGCCTGATGACCCCACGCGCAAGACCAAAG...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
3UTR CAA 72 bp TGGTTAATATGGCCAAAGGAGCTCTATATATACAACTaGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: WLIWPKELYIYN*SQVGQHWTCWA
Trigger: GGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACCATTGGCAAATCCAATaGAGTCTTCATGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHHWQIQ*SLHGLC
Trigger: ACACAAACCATGAAGACTTCATTGGATTTGCCAATG...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACTGGTTCAGGGTTTTCTaGAAGTGTGGGGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYWFRVF*KCGVPM
Trigger: CATGGGCACCCCACACTTGCAGAAAACCCTGAACCA...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACCATGTGCCGGTAGGCTaGGTGGGAGAGGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYHVPVG*VGEEEF
Trigger: AAATTCTTCCTCTCCCACCCAGCCTACCGGCACATG...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACCCCCCTGATTGGGTATaGCCCTCTTCTTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYPPDWV*PSSCSA
Trigger: AGCTGAACAAGAAGAGGGCCATACCCAATCAGGGGG...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000072362.14
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGCCGCTGGTGTTTTaGAGCCACGTGTCATCGACC +
Preference number: 4 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHWPLVF*SHVSST
Trigger: GGTCGATGACACGTGGCTCCAAAACACCAGCGGCCA...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACTTGGAAAAGATGAGCTaGAGAATGAGAGGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYLEKMS*RMRGLR
Trigger: CCGGAGGCCTCTCATTCTGCAGCTCATCTTTTCCAA...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp TGTGGGCCTCCTCACCCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGTTTTTGGACTTGCAGTaGAAAAATTCCGCATATTCT +
Preference number: 4 (lower is better)
Translates to: CGPPHPSLSCPLGRGGKGFLDLQ*KNSAYS
Trigger: AGAATATGCGGAATTTTTGCACTGCAAGTCCAAAAA...CCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACTCGCGGCTGATGAACTaGAGGATCATGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYSRLMN*RIMSLI
Trigger: GATCAAGGACATGATCCTGCAGTTCATCAGCCGCGA...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGCCCGGATGTCCTTTTTaGCCTCGATGTCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: NMAKGALYIQLEPGGSALPGCPF*PRCLSG
Trigger: GCCAGAAAGACATCGAGGGCAAAAAGGACATCCGGG...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp GAACTGCAGGATCATGTCCTTGATCTGGTACTCGATGTCTGGCGGCTGGTCCCCTTTTTGGACTTGCAGTaGAAAAATTCCGCATATTCG +
Preference number: 4 (lower is better)
Translates to: ELQDHVLDLVLDVWRLVPFLDLQ*KNSAYS
Trigger: CGAATATGCGGAATTTTTGCACTGCAAGTCCAAAAA...GGGGACCAGCCGCCAGACATCGAGTACCAGATCAAGGACATGATCCTGCAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000174828.2
CDS-3UTR CCA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACCTTTGGTCTTGCGCGTaGGGTCATCAGGCCGGAAAT +
Preference number: 4 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHLWSCA*GHQAGN
Trigger: ATTTCCGGCCTGATGACCCCACGCGCAAGACCAAAG...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGCCAGCAGCTCATGGTaGATGAAGGCCTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: NMAKGALYIQLEPGGSALASSSW*MKAFVL
Trigger: CAACACAAAGGCCTTCATCCACCATGAGCTGCTGGC...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGAGATGGTATCTGAGGTaGCGCAGAGAAGGGGTCGTT +
Preference number: 4 (lower is better)
Translates to: NMAKGALYIQLEPGGSALRWYLR*RREGVV
Trigger: AACGACCCCTTCTCTGCGCCACCTCAGATACCATCT...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR TCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACAAGGGAAAGCGCTCATaGAAGATACGATTGATGCGG +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYKGKRS*KIRLMR
Trigger: CCGCATCAATCGTATCTTTCATGAGCGCTTTCCCTT...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTTTTTTGGACTTGCAGTaGAAAAATTCCGCATATTCT +
Preference number: 4 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCFLDLQ*KNSAYS
Trigger: AGAATATGCGGAATTTTTGCACTGCAAGTCCAAAAA...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACGCCAGCAGCTCATGGTaGATGAAGGCCTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHASSSW*MKAFVL
Trigger: CAACACAAAGGCCTTCATCCACCATGAGCTGCTGGC...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGTCCATGAGGCTGCTCTaGTCTGCTGATGAATACAGG +
Preference number: 4 (lower is better)
Translates to: NMAKGALYIQLEPGGSALSMRLL*SADEYR
Trigger: CCTGTATTCATCAGCAGACCAGAGCAGCCTCATGGA...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACAGATGGTATCTGAGGTaGCGCAGAGAAGGGGTCGTT +
Preference number: 4 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHRWYLR*RREGVV
Trigger: AACGACCCCTTCTCTGCGCCACCTCAGATACCATCT...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGAAGATGGCAAACACGTaGTTGTTGGACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: NMAKGALYIQLEPGGSALKMANT*LLDMKP
Trigger: GGGCTTCATGTCCAACAAGCACGTGTTTGCCATCTT...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACATGTGGTTGGTCAGTTaGTGGTTCAGGGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHMWLVS*WFRVFC
Trigger: GCAGAAAACCCTGAACCAGCAACTGACCAACCACAT...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACGAAGGTGTTCTCTTGTaGTCCATCCTCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHEGVLL*SILILC
Trigger: GCAGAGAATGAGGATGGAGCACAAGAGAACACCTTC...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACGTGTTGATGTACGACTaGTCAATGTCAATCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYVLMYD*SMSIRR
Trigger: TCTTCTGATTGACATTGAGCAGTCGTACATCAACAC...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CCA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGATCAGAAGAAGAATCTaGTCCTTGGTTCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: NMAKGALYIQLEPGGSALIRRRI*SLVLPS
Trigger: AGAAGGGAGAACCAAGGACCAGATTCTTCTTCTGAT...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACTTTTTGGACTTGCAGTaGAAAAATTCCGCATATTCT +
Preference number: 4 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYFLDLQ*KNSAYS
Trigger: AGAATATGCGGAATTTTTGCACTGCAAGTCCAAAAA...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR GCA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACGTGTTGATGTACGACTaGTCAATGTCAATCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHVLMYD*SMSIRR
Trigger: TCTTCTGATTGACATTGAGCAGTCGTACATCAACAC...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS CCA 90 bp AGGTGGCCGGCCTGGTGGGTGCACACTGGACACAGGTCGGCGCTGTaGAGTGGGGCTGTGGCCGCTGGTGTTTTGGAGCCACGTGTCATC +
Preference number: 5 (lower is better)
Translates to: RWPAWWVHTGHRSAL*SGAVAAGVLEPRVI
Trigger: GATGACACGTGGCTCCAAAACACCAGCGGCCACAGCCCCACTCCACAGCGCCGACCTGTGTCCAGTGTGCACCCACCAGGCCGGCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTGGGGAGATGCCTTTGTaGGTGCCTGTGACCCGGTCA +
Preference number: 5 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWAGEMPL*VPVTRS
Trigger: TGACCGGGTCACAGGCACCAACAAAGGCATCTCCCC...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCGACTCTCGGATGTGGTaGGTCAGTTGCTGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: GPPGLRKAQRHLWVRSLGDSRMW*VSCWFR
Trigger: CCTGAACCAGCAACTGACCAACCACATCCGAGAGTC...GCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTGGTATGGCCCTCTTCTaGTTCAGCTGCGTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWAGMALF*FSCVLL
Trigger: GAGGAGCACGCAGCTGAACAAGAAGAGGGCCATACC...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGCCCGGATGTCCTTTTaGCCCTCGATGTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLARMSF*PSMSFW
Trigger: CCAGAAAGACATCGAGGGCAAAAAGGACATCCGGGC...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTGACTCTCGGATGTGGTaGGTCAGTTGCTGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWADSRMW*VSCWFR
Trigger: CCTGAACCAGCAACTGACCAACCACATCCGAGAGTC...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCATGTCCCCAATAATGTaGAGGGCCTCCTTCAGTGCG +
Preference number: 5 (lower is better)
Translates to: GPPGLRKAQRHLWVRSLGMSPIM*RASFSA
Trigger: CGCACTGAAGGAGGCCCTCAACATTATTGGGGACAT...GCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTCCATCAAGTCTAGCTaGGTGATGACACCGATGGTC +
Preference number: 5 (lower is better)
Translates to: GPPGLRKAQRHLWVRSLGSIKSS*VMTPMV
Trigger: GACCATCGGTGTCATCACCAAGCTAGACTTGATGGA...GCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTCTCAAGGGCAGTAGCTaGTTTTCCAGGACATCCCTG +
Preference number: 5 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWALKGSS*FSRTSL
Trigger: CAGGGATGTCCTGGAAAACAAGCTACTGCCCTTGAG...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGCTCCAGGGACAGCAGTaGGCTCTGCAGCTTGCTGCG +
Preference number: 5 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGLQGQQ*ALQLAA
Trigger: CGCAGCAAGCTGCAGAGCCAACTGCTGTCCCTGGAG...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGCTCCAGGGACAGCAGTaGGCTCTGCAGCTTGCTGCG +
Preference number: 5 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLLQGQQ*ALQLAA
Trigger: CGCAGCAAGCTGCAGAGCCAACTGCTGTCCCTGGAG...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTAGAAGAATCTGGTCCTaGGTTCTCCCTTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWARRIWS*VLPSRS
Trigger: GGAGCGAGAAGGGAGAACCAAGGACCAGATTCTTCT...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTGGTATGGCCCTCTTCTaGTTCAGCTGCGTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ERKEPWPLGPEGSQLVGGGMALF*FSCVLL
Trigger: GAGGAGCACGCAGCTGAACAAGAAGAGGGCCATACC...ACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGATGTCCCCAATAATGTaGAGGGCCTCCTTCAGTGCG +
Preference number: 5 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWMSPIM*RASFSA
Trigger: CGCACTGAAGGAGGCCCTCAACATTATTGGGGACAT...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGTGGCCGCTGGTGTTTaGGAGCCACGTGTCATCGAC +
Preference number: 5 (lower is better)
Translates to: KEGALAPWPRGEPASRWFVAAGV*EPRVID
Trigger: GTCGATGACACGTGGCTCCAAAACACCAGCGGCCAC...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS CCA 90 bp GGGCACTCCTGGAGGGATACCAGGGGGAATCCGTGCTGGCCGAGATaGTATCTGAGGTGGCGCAGAGAAGGGGTCGTTGTTGGCAAACAC +
Preference number: 5 (lower is better)
Translates to: GHSWRDTRGNPCWPR*YLRWRREGVVVGKH
Trigger: GTGTTTGCCAACAACGACCCCTTCTCTGCGCCACCTCAGATACCATCTCGGCCAGCACGGATTCCCCCTGGTATCCCTCCAGGAGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGGAGATGCCTTTGTaGGTGCCTGTGACCCGGTCA +
Preference number: 5 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSGEMPL*VPVTRS
Trigger: TGACCGGGTCACAGGCACCAACAAAGGCATCTCCCC...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp GGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTGGGGAGATGCCTTTGTaGGTGCCTGTGACCCGGTCA +
Preference number: 5 (lower is better)
Translates to: GAGPQRRLAHEPQGTEGIGEMPL*VPVTRS
Trigger: TGACCGGGTCACAGGCACCAACAAAGGCATCTCCCC...AATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACACAGGGGAGATGCCTTaGTTGGTGCCTGTGACCCGG +
Preference number: 5 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHTGEMP*LVPVTR
Trigger: CCGGGTCACAGGCACCAACAAAGGCATCTCCCCTGT...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTGCAGGGCCTCAGACAGGGGAGATGCCTTaGTTGGTGCCTGTGACCCGG +
Preference number: 5 (lower is better)
Translates to: LVGGLGEAPSFSLGAGPQTGEMP*LVPVTR
Trigger: CCGGGTCACAGGCACCAACAAAGGCATCTCCCCTGT...CTGAGGCCCTGCACCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTTTGAGGGCGTCTGAGTaGGCCAAGTCCATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGLRASE*AKSMLA
Trigger: TGCCAACATGGACTTGGCCAACTCAGACGCCCTCAA...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTGATGTGGTTGGTCAGTaGCTGGTTCAGGGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWADVVGQ*LVQGFL
Trigger: CAGAAAACCCTGAACCAGCAACTGACCAACCACATC...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGATGTGGTTGGTCAGTaGCTGGTTCAGGGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWDVVGQ*LVQGFL
Trigger: CAGAAAACCCTGAACCAGCAACTGACCAACCACATC...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGACTCTCGGATGTGGTaGGTCAGTTGCTGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGDSRMW*VSCWFR
Trigger: CCTGAACCAGCAACTGACCAACCACATCCGAGAGTC...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGACTCTCGGATGTGGTaGGTCAGTTGCTGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLDSRMW*VSCWFR
Trigger: CCTGAACCAGCAACTGACCAACCACATCCGAGAGTC...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp TGTGGGCCTCCTCACCCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCTCCAGGGACAGCAGTaGGCTCTGCAGCTTGCTGCG +
Preference number: 5 (lower is better)
Translates to: CGPPHPSLSCPLGRGGKGLQGQQ*ALQLAA
Trigger: CGCAGCAAGCTGCAGAGCCAACTGCTGTCCCTGGAG...CCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGCAAACACGTGCTTGTaGGACATGAAGCCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLANTCL*DMKPFS
Trigger: GGAAAAGGGCTTCATGTCCAACAAGCACGTGTTTGC...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTTTCCTCTGCTCTGTGTaGAAGATGGCAAACACGTGC +
Preference number: 5 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWAFLCSV*KMANTC
Trigger: GCACGTGTTTGCCATCTTCAACACAGAGCAGAGGAA...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGAGAAGGTGTTCTCTaGTGCTCCATCCTCATTCTC +
Preference number: 5 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLGEGVL*CSILIL
Trigger: GAGAATGAGGATGGAGCACAAGAGAACACCTTCTCC...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGGTGGCCGCTGGTGTTTaGGAGCCACGTGTCATCGAC +
Preference number: 5 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGVAAGV*EPRVID
Trigger: GTCGATGACACGTGGCTCCAAAACACCAGCGGCCAC...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS GCA 90 bp TGTGGTTGGTCAGTTGCTGGTTCAGGGTTTTCTGCAAGTGTGGGGTaGCCATGCGGTCAGCCATGTGCCGGTAGGCTGGGTGGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: CGWSVAGSGFSASVG*PCGQPCAGRLGGRG
Trigger: TCCTCTCCCACCCAGCCTACCGGCACATGGCTGACCGCATGGGCACCCCACACTTGCAGAAAACCCTGAACCAGCAACTGACCAACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS CCA 90 bp TCGGATGTGGTTGGTCAGTTGCTGGTTCAGGGTTTTCTGCAAGTGTaGGGTGCCCATGCGGTCAGCCATGTGCCGGTAGGCTGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: SDVVGQLLVQGFLQV*GAHAVSHVPVGWVG
Trigger: TCCCACCCAGCCTACCGGCACATGGCTGACCGCATGGGCACCCCACACTTGCAGAAAACCCTGAACCAGCAACTGACCAACCACATCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTGGGGAGATGCCTTTGTaGGTGCCTGTGACCCGGTCA +
Preference number: 5 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPGEMPL*VPVTRS
Trigger: TGACCGGGTCACAGGCACCAACAAAGGCATCTCCCC...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGTGCAGGATCATGTCCTaGATCTGGTACTCGATGTCT +
Preference number: 5 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWCRIMS*IWYSMS
Trigger: AGACATCGAGTACCAGATCAAGGACATGATCCTGCA...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTTTGAGGGCGTCTGAGTaGGCCAAGTCCATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: KEGALAPWPRGEPASRWFLRASE*AKSMLA
Trigger: TGCCAACATGGACTTGGCCAACTCAGACGCCCTCAA...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTCTCAAGGGCAGTAGCTaGTTTTCCAGGACATCCCTG +
Preference number: 5 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGLKGSS*FSRTSL
Trigger: CAGGGATGTCCTGGAAAACAAGCTACTGCCCTTGAG...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCCTCAAGGGCAGTAGCTaGTTTTCCAGGACATCCCTG +
Preference number: 5 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGLKGSS*FSRTSL
Trigger: CAGGGATGTCCTGGAAAACAAGCTACTGCCCTTGAG...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGACTCTCGGATGTGGTaGGTCAGTTGCTGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: KEGALAPWPRGEPASRWFDSRMW*VSCWFR
Trigger: CCTGAACCAGCAACTGACCAACCACATCCGAGAGTC...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTCTCCAGGGACAGCAGTaGGCTCTGCAGCTTGCTGCG +
Preference number: 5 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCLQGQQ*ALQLAA
Trigger: CGCAGCAAGCTGCAGAGCCAACTGCTGTCCCTGGAG...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGTCAGGCCGGAAATTCTaGTACTCTTCCACTTCCTTC +
Preference number: 5 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLSGRKF*YSSTSF
Trigger: GAAGGAAGTGGAAGAGTACAAGAATTTCCGGCCTGA...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGAGAAGAATCTGGTCCTaGGTTCTCCCTTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLRRIWS*VLPSRS
Trigger: GGAGCGAGAAGGGAGAACCAAGGACCAGATTCTTCT...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTATGGCCCTCTTCTaGTTCAGCTGCGTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLGMALF*FSCVLL
Trigger: GAGGAGCACGCAGCTGAACAAGAAGAGGGCCATACC...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTTCCCGGATCTTGAGGTaGTCCAGTGGCAGCATGTAC +
Preference number: 5 (lower is better)
Translates to: KEGALAPWPRGEPASRWFSRILR*SSGSMY
Trigger: GTACATGCTGCCACTGGACAACCTCAAGATCCGGGA...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGATGGCAAACACGTGCTaGTTGGACATGAAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLMANTC*LDMKPF
Trigger: AAAGGGCTTCATGTCCAACAAGCACGTGTTTGCCAT...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGATGGCAAACACGTGCTaGTTGGACATGAAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: PPGLRKAQRHLWVRSLGWMANTC*LDMKPF
Trigger: AAAGGGCTTCATGTCCAACAAGCACGTGTTTGCCAT...CCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATGTCCCCAATAATGTaGAGGGCCTCCTTCAGTGCG +
Preference number: 5 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGMSPIM*RASFSA
Trigger: CGCACTGAAGGAGGCCCTCAACATTATTGGGGACAT...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCCTTGTGGCCGCTGGTGTTTaGGAGCCACGTGTCATCGAC +
Preference number: 5 (lower is better)
Translates to: LIPKCKAPMCCAVGLLTLVAAGV*EPRVID
Trigger: GTCGATGACACGTGGCTCCAAAACACCAGCGGCCAC...AAGGGTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTGTGGCCGCTGGTGTTTaGGAGCCACGTGTCATCGAC +
Preference number: 5 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPVAAGV*EPRVID
Trigger: GTCGATGACACGTGGCTCCAAAACACCAGCGGCCAC...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGGAGATGCCTTTGTaGGTGCCTGTGACCCGGTCA +
Preference number: 5 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCGEMPL*VPVTRS
Trigger: TGACCGGGTCACAGGCACCAACAAAGGCATCTCCCC...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTACAGGGGAGATGCCTTaGTTGGTGCCTGTGACCCGG +
Preference number: 5 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCTGEMP*LVPVTR
Trigger: CCGGGTCACAGGCACCAACAAAGGCATCTCCCCTGT...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACACAGGGGAGATGCCTTaGTTGGTGCCTGTGACCCGG +
Preference number: 5 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHTGEMP*LVPVTR
Trigger: CCGGGTCACAGGCACCAACAAAGGCATCTCCCCTGT...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTTTGAGGGCGTCTGAGTaGGCCAAGTCCATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSLRASE*AKSMLA
Trigger: TGCCAACATGGACTTGGCCAACTCAGACGCCCTCAA...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCTCCATCAAGTCTAGCTaGGTGATGACACCGATGGTC +
Preference number: 5 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGSIKSS*VMTPMV
Trigger: GACCATCGGTGTCATCACCAAGCTAGACTTGATGGA...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGCCCGGATGTCCTTTTaGCCCTCGATGTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLARMSF*PSMSFW
Trigger: CCAGAAAGACATCGAGGGCAAAAAGGACATCCGGGC...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGGACTCTCGGATGTGGTaGGTCAGTTGCTGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTDSRMW*VSCWFR
Trigger: CCTGAACCAGCAACTGACCAACCACATCCGAGAGTC...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGTCCCGGATCTTGAGGTaGTCCAGTGGCAGCATGTAC +
Preference number: 5 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLSRILR*SSGSMY
Trigger: GTACATGCTGCCACTGGACAACCTCAAGATCCGGGA...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCGCAAACACGTGCTTGTaGGACATGAAGCCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGANTCL*DMKPFS
Trigger: GGAAAAGGGCTTCATGTCCAACAAGCACGTGTTTGC...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCAAACACGTGCTTGTaGGACATGAAGCCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGANTCL*DMKPFS
Trigger: GGAAAAGGGCTTCATGTCCAACAAGCACGTGTTTGC...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTCCTCTGCTCTGTGTaGAAGATGGCAAACACGTGC +
Preference number: 5 (lower is better)
Translates to: ERKEPWPLGPEGSQLVGGFLCSV*KMANTC
Trigger: GCACGTGTTTGCCATCTTCAACACAGAGCAGAGGAA...ACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAAGGTGTTCTCTaGTGCTCCATCCTCATTCTC +
Preference number: 5 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLGEGVL*CSILIL
Trigger: GAGAATGAGGATGGAGCACAAGAGAACACCTTCTCC...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp GAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTGGAGAAGGTGTTCTCTaGTGCTCCATCCTCATTCTC +
Preference number: 5 (lower is better)
Translates to: ERKEPWPLGPEGSQLVGGGEGVL*CSILIL
Trigger: GAGAATGAGGATGGAGCACAAGAGAACACCTTCTCC...ACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTAAGGCCTTTGTGTTGTaGATCATGAGGTGCATGATG +
Preference number: 5 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWAKAFVL*IMRCMM
Trigger: CATCATGCACCTCATGATCAACAACACAAAGGCCTT...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGGGCTATGAAGGCCTTTGTGTaGTTGATCATGAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: PGLRKAQRHLWVRSLGWAMKAFV*LIMRCM
Trigger: CATGCACCTCATGATCAACAACACAAAGGCCTTCAT...AGCCCAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCTTGAGGGCGTCTGAGTaGGCCAAGTCCATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCLRASE*AKSMLA
Trigger: TGCCAACATGGACTTGGCCAACTCAGACGCCCTCAA...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTGCCCGGATGTCCTTTTaGCCCTCGATGTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPARMSF*PSMSFW
Trigger: CCAGAAAGACATCGAGGGCAAAAAGGACATCCGGGC...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCGCCCGGATGTCCTTTTaGCCCTCGATGTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCARMSF*PSMSFW
Trigger: CCAGAAAGACATCGAGGGCAAAAAGGACATCCGGGC...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTGCCCGGATGTCCTTTTaGCCCTCGATGTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFARMSF*PSMSFW
Trigger: CCAGAAAGACATCGAGGGCAAAAAGGACATCCGGGC...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGTATGGCCCTCTTCTaGTTCAGCTGCGTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCGMALF*FSCVLL
Trigger: GAGGAGCACGCAGCTGAACAAGAAGAGGGCCATACC...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCGGTATGGCCCTCTTCTaGTTCAGCTGCGTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSGMALF*FSCVLL
Trigger: GAGGAGCACGCAGCTGAACAAGAAGAGGGCCATACC...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GAAAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTATGGCAAACACGTGCTaGTTGGACATGAAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: ERKEPWPLGPEGSQLVGGMANTC*LDMKPF
Trigger: AAAGGGCTTCATGTCCAACAAGCACGTGTTTGCCAT...ACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATGGCAAACACGTGCTaGTTGGACATGAAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGMANTC*LDMKPF
Trigger: AAAGGGCTTCATGTCCAACAAGCACGTGTTTGCCAT...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGATGTCCCCAATAATGTaGAGGGCCTCCTTCAGTGCG +
Preference number: 5 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTMSPIM*RASFSA
Trigger: CGCACTGAAGGAGGCCCTCAACATTATTGGGGACAT...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTATGTCCCCAATAATGTaGAGGGCCTCCTTCAGTGCG +
Preference number: 5 (lower is better)
Translates to: GAGPQRRLAHEPQGTEGIMSPIM*RASFSA
Trigger: CGCACTGAAGGAGGCCCTCAACATTATTGGGGACAT...AATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACTCCATCAAGTCTAGCTaGGTGATGACACCGATGGTC +
Preference number: 5 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHSIKSS*VMTPMV
Trigger: GACCATCGGTGTCATCACCAAGCTAGACTTGATGGA...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACTCAAGGGCAGTAGCTaGTTTTCCAGGACATCCCTG +
Preference number: 5 (lower is better)
Translates to: SSSSQSAKPPCAVLWASSLKGSS*FSRTSL
Trigger: CAGGGATGTCCTGGAAAACAAGCTACTGCCCTTGAG...TGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCGCCCGGATGTCCTTTTaGCCCTCGATGTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSARMSF*PSMSFW
Trigger: CCAGAAAGACATCGAGGGCAAAAAGGACATCCGGGC...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACGATGTGGTTGGTCAGTaGCTGGTTCAGGGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHDVVGQ*LVQGFL
Trigger: CAGAAAACCCTGAACCAGCAACTGACCAACCACATC...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGATGTGGTTGGTCAGTaGCTGGTTCAGGGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLDVVGQ*LVQGFL
Trigger: CAGAAAACCCTGAACCAGCAACTGACCAACCACATC...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTTCAGGCCGGAAATTCTaGTACTCTTCCACTTCCTTC +
Preference number: 5 (lower is better)
Translates to: KEGALAPWPRGEPASRWFSGRKF*YSSTSF
Trigger: GAAGGAAGTGGAAGAGTACAAGAATTTCCGGCCTGA...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTAGAAGAATCTGGTCCTaGGTTCTCCCTTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPRRIWS*VLPSRS
Trigger: GGAGCGAGAAGGGAGAACCAAGGACCAGATTCTTCT...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCAGAAGAATCTGGTCCTaGGTTCTCCCTTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCRRIWS*VLPSRS
Trigger: GGAGCGAGAAGGGAGAACCAAGGACCAGATTCTTCT...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CTGGGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCTTCATCAAGCTGATATaGTTGATGGTCAACCAGCCC +
Preference number: 5 (lower is better)
Translates to: LGAGPQRRLAHEPQGTEGFIKLI*LMVNQP
Trigger: GGGCTGGTTGACCATCAACAATATCAGCTTGATGAA...GCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACTCCCGGATCTTGAGGTaGTCCAGTGGCAGCATGTAC +
Preference number: 5 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHSRILR*SSGSMY
Trigger: GTACATGCTGCCACTGGACAACCTCAAGATCCGGGA...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTTCCCGGATCTTGAGGTaGTCCAGTGGCAGCATGTAC +
Preference number: 5 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCSRILR*SSGSMY
Trigger: GTACATGCTGCCACTGGACAACCTCAAGATCCGGGA...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGGCAAACACGTGCTTGTaGGACATGAAGCCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGANTCL*DMKPFS
Trigger: GGAAAAGGGCTTCATGTCCAACAAGCACGTGTTTGC...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACTTCCTCTGCTCTGTGTaGAAGATGGCAAACACGTGC +
Preference number: 5 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHFLCSV*KMANTC
Trigger: GCACGTGTTTGCCATCTTCAACACAGAGCAGAGGAA...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTTCCTCTGCTCTGTGTaGAAGATGGCAAACACGTGC +
Preference number: 5 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGFLCSV*KMANTC
Trigger: GCACGTGTTTGCCATCTTCAACACAGAGCAGAGGAA...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGGGAGAAGGTGTTCTCTaGTGCTCCATCCTCATTCTC +
Preference number: 5 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTGEGVL*CSILIL
Trigger: GAGAATGAGGATGGAGCACAAGAGAACACCTTCTCC...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TGGCCAGAGCTGAGGCCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTAAGGCCTTTGTGTTGTaGATCATGAGGTGCATGATG +
Preference number: 5 (lower is better)
Translates to: WPELRPSRPEEGTKAPLGKAFVL*IMRCMM
Trigger: CATCATGCACCTCATGATCAACAACACAAAGGCCTT...ACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGGCCTCAGCTCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGAAGGCCTTTGTGTTGTaGATCATGAGGTGCATGATG +
Preference number: 5 (lower is better)
Translates to: RKEPWPLGPEGSQLVGGLKAFVL*IMRCMM
Trigger: CATCATGCACCTCATGATCAACAACACAAAGGCCTT...CAAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGTGCAGGATCATGTCCTaGATCTGGTACTCGATGTCT +
Preference number: 5 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTCRIMS*IWYSMS
Trigger: AGACATCGAGTACCAGATCAAGGACATGATCCTGCA...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTGCAGGATCATGTCCTaGATCTGGTACTCGATGTCT +
Preference number: 5 (lower is better)
Translates to: GAGPQRRLAHEPQGTEGICRIMS*IWYSMS
Trigger: AGACATCGAGTACCAGATCAAGGACATGATCCTGCA...AATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCCTTTCCATCAAGTCTAGCTaGGTGATGACACCGATGGTC +
Preference number: 5 (lower is better)
Translates to: LIPKCKAPMCCAVGLLTLSIKSS*VMTPMV
Trigger: GACCATCGGTGTCATCACCAAGCTAGACTTGATGGA...AAGGGTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACCTCAAGGGCAGTAGCTaGTTTTCCAGGACATCCCTG +
Preference number: 5 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHLKGSS*FSRTSL
Trigger: CAGGGATGTCCTGGAAAACAAGCTACTGCCCTTGAG...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCGATGTGGTTGGTCAGTaGCTGGTTCAGGGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCDVVGQ*LVQGFL
Trigger: CAGAAAACCCTGAACCAGCAACTGACCAACCACATC...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTTCAGGCCGGAAATTCTaGTACTCTTCCACTTCCTTC +
Preference number: 5 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSSGRKF*YSSTSF
Trigger: GAAGGAAGTGGAAGAGTACAAGAATTTCCGGCCTGA...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCCTCCAGGCCTGAGGAAGGCACAAAGGCACCTCTGGGTGCGGAGCCTGGGCTGTTCAAACTCGGCTCTTaGAGTTTTACAAGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: PSRPEEGTKAPLGAEPGLFKLGS*SFTSCF
Trigger: AAAACAGCTTGTAAAACTCAAAGAGCCGAGTTTGAA...CAGCCCAGGCTCCGCACCCAGAGGTGCCTTTGTGCCTTCCTCAGGCCTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000072362.14
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTTTCATCAAGCTGATATaGTTGATGGTCAACCAGCCC +
Preference number: 5 (lower is better)
Translates to: KEGALAPWPRGEPASRWFFIKLI*LMVNQP
Trigger: GGGCTGGTTGACCATCAACAATATCAGCTTGATGAA...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACATGGCAAACACGTGCTaGTTGGACATGAAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHMANTC*LDMKPF
Trigger: AAAGGGCTTCATGTCCAACAAGCACGTGTTTGCCAT...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCTTCCTCTGCTCTGTGTaGAAGATGGCAAACACGTGC +
Preference number: 5 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCFLCSV*KMANTC
Trigger: GCACGTGTTTGCCATCTTCAACACAGAGCAGAGGAA...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCGGAGAAGGTGTTCTCTaGTGCTCCATCCTCATTCTC +
Preference number: 5 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCGEGVL*CSILIL
Trigger: GAGAATGAGGATGGAGCACAAGAGAACACCTTCTCC...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AAGGAAGGAGCCCTGGCCCCTTGGCCCAGAGGGGAGCCAGCTAGTAGGTGGTTTATGAAGGCCTTTGTGTaGTTGATCATGAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: KEGALAPWPRGEPASRWFMKAFV*LIMRCM
Trigger: CATGCACCTCATGATCAACAACACAAAGGCCTTCAT...AAACCACCTACTAGCTGGCTCCCCTCTGGGCCAAGGGGCCAGGGCTCCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCATGTCCCCAATAATGTaGAGGGCCTCCTTCAGTGCG +
Preference number: 5 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSMSPIM*RASFSA
Trigger: CGCACTGAAGGAGGCCCTCAACATTATTGGGGACAT...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTTGCAGGATCATGTCCTaGATCTGGTACTCGATGTCT +
Preference number: 5 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFCRIMS*IWYSMS
Trigger: AGACATCGAGTACCAGATCAAGGACATGATCCTGCA...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCTCCATCAAGTCTAGCTaGGTGATGACACCGATGGTC +
Preference number: 5 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSSIKSS*VMTPMV
Trigger: GACCATCGGTGTCATCACCAAGCTAGACTTGATGGA...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGTTCATCAAGCTGATATaGTTGATGGTCAACCAGCCC +
Preference number: 5 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTFIKLI*LMVNQP
Trigger: GGGCTGGTTGACCATCAACAATATCAGCTTGATGAA...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGTTCTCCTCCTCATCCTaGTACCAAGACAATGACTCA +
Preference number: 5 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLFSSSS*YQDNDS
Trigger: TGAGTCATTGTCTTGGTACAAGGATGAGGAGGAGAA...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp AGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGGGTTCTCCTCCTCATCCTaGTACCAAGACAATGACTCA +
Preference number: 5 (lower is better)
Translates to: RGEPASRWFGRGPFLLSGFSSSS*YQDNDS
Trigger: TGAGTCATTGTCTTGGTACAAGGATGAGGAGGAGAA...CCCAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGCAAACACGTGCTTGTaGGACATGAAGCCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCANTCL*DMKPFS
Trigger: GGAAAAGGGCTTCATGTCCAACAAGCACGTGTTTGC...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TGTGGGCCTCCTCACCCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGATGGCAAACACGTGCTaGTTGGACATGAAGCCCTTT +
Preference number: 5 (lower is better)
Translates to: CGPPHPSLSCPLGRGGKGMANTC*LDMKPF
Trigger: AAAGGGCTTCATGTCCAACAAGCACGTGTTTGCCAT...CCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTTTCCTCTGCTCTGTGTaGAAGATGGCAAACACGTGC +
Preference number: 5 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCFLCSV*KMANTC
Trigger: GCACGTGTTTGCCATCTTCAACACAGAGCAGAGGAA...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GGTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTAAGGCCTTTGTGTTGTaGATCATGAGGTGCATGATG +
Preference number: 5 (lower is better)
Translates to: GAGPQRRLAHEPQGTEGIKAFVL*IMRCMM
Trigger: CATCATGCACCTCATGATCAACAACACAAAGGCCTT...AATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGCAGGGCTTGCCCACGATGAAGGCCTTTGTGTaGTTGATCATGAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: PSLSCPLGRGGKGQGLPTMKAFV*LIMRCM
Trigger: CATGCACCTCATGATCAACAACACAAAGGCCTTCAT...CGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGATGAAGGCCTTTGTGTaGTTGATCATGAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLMKAFV*LIMRCM
Trigger: CATGCACCTCATGATCAACAACACAAAGGCCTTCAT...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACTCAGGCCGGAAATTCTaGTACTCTTCCACTTCCTTC +
Preference number: 5 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHSGRKF*YSSTSF
Trigger: GAAGGAAGTGGAAGAGTACAAGAATTTCCGGCCTGA...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTGTCTTCATGGTTTGTGTaGATGTACGACTGCTCAATG +
Preference number: 5 (lower is better)
Translates to: PEGSQLVGGLGEAPSFSLSSWFV*MYDCSM
Trigger: CATTGAGCAGTCGTACATCAACACAAACCATGAAGA...CAGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp CCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACTCTTCATGGTTTGTGTaGATGTACGACTGCTCAATG +
Preference number: 5 (lower is better)
Translates to: PPHPKVQSPHVLCCGPPHSSWFV*MYDCSM
Trigger: CATTGAGCAGTCGTACATCAACACAAACCATGAAGA...GTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCCAGAGGGGAGCCAGCTAGTAGGTGGTTTGGGAGAGGCCCCTTCCTTCTCTCTTCTTCATGGTTTGTGTaGATGTACGACTGCTCAATG +
Preference number: 5 (lower is better)
Translates to: PRGEPASRWFGRGPFLLSSSWFV*MYDCSM
Trigger: CATTGAGCAGTCGTACATCAACACAAACCATGAAGA...AGAGAGAAGGAAGGGGCCTCTCCCAAACCACCTACTAGCTGGCTCCCCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTTTCATCAAGCTGATATaGTTGATGGTCAACCAGCCC +
Preference number: 5 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPFIKLI*LMVNQP
Trigger: GGGCTGGTTGACCATCAACAATATCAGCTTGATGAA...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCATTCATCAAGCTGATATaGTTGATGGTCAACCAGCCC +
Preference number: 5 (lower is better)
Translates to: SSSSQSAKPPCAVLWASSFIKLI*LMVNQP
Trigger: GGGCTGGTTGACCATCAACAATATCAGCTTGATGAA...TGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTCCTCACCCTTTTCTCCTCCTCATCCTaGTACCAAGACAATGACTCA +
Preference number: 5 (lower is better)
Translates to: LIPKCKAPMCCAVGLLTLFSSSS*YQDNDS
Trigger: TGAGTCATTGTCTTGGTACAAGGATGAGGAGGAGAA...AAGGGTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGGAGAAGGTGTTCTCTaGTGCTCCATCCTCATTCTC +
Preference number: 5 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLGEGVL*CSILIL
Trigger: GAGAATGAGGATGGAGCACAAGAGAACACCTTCTCC...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TGTGGGCCTCCTCACCCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGAAGGCCTTTGTGTTGTaGATCATGAGGTGCATGATG +
Preference number: 5 (lower is better)
Translates to: CGPPHPSLSCPLGRGGKGKAFVL*IMRCMM
Trigger: CATCATGCACCTCATGATCAACAACACAAAGGCCTT...CCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCATGAAGGCCTTTGTGTaGTTGATCATGAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCMKAFV*LIMRCM
Trigger: CATGCACCTCATGATCAACAACACAAAGGCCTTCAT...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACGTGGCCGCTGGTGTTTaGGAGCCACGTGTCATCGAC +
Preference number: 5 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYVAAGV*EPRVID
Trigger: GTCGATGACACGTGGCTCCAAAACACCAGCGGCCAC...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCTCCGCATATTCTGTTTaGGAAAAGATGAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCSAYSV*EKMSCR
Trigger: TCTGCAGCTCATCTTTTCCAAAACAGAATATGCGGA...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AGAGCTCCTCCTCATCCCAAAGTGCAAAGCCCCCATGTGCTGTGCTGTGGGCCTTCCGCATATTCTGTTTaGGAAAAGATGAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: RAPPHPKVQSPHVLCCGPSAYSV*EKMSCR
Trigger: TCTGCAGCTCATCTTTTCCAAAACAGAATATGCGGA...AGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GTGCAGGGCCTCAGAGAAGGCTGGCCCATGAGCCTCAAGGAACAGAGGGCATTTTCCGCATATTCTGTTTaGGAAAAGATGAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: VQGLREGWPMSLKEQRAFSAYSV*EKMSCR
Trigger: TCTGCAGCTCATCTTTTCCAAAACAGAATATGCGGA...AAATGCCCTCTGTTCCTTGAGGCTCATGGGCCAGCCTTCTCTGAGGCCCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp TGTGGGCCTCCTCACCCTTCATTGTCATGTCCACTAGGGCGAGGAGGGAAAGGGTCCGCATATTCTGTTTaGGAAAAGATGAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: CGPPHPSLSCPLGRGGKGSAYSV*EKMSCR
Trigger: TCTGCAGCTCATCTTTTCCAAAACAGAATATGCGGA...CCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACCTCCAGGGACAGCAGTaGGCTCTGCAGCTTGCTGCG +
Preference number: 5 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHLQGQQ*ALQLAA
Trigger: CGCAGCAAGCTGCAGAGCCAACTGCTGTCCCTGGAG...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACGGTATGGCCCTCTTCTaGTTCAGCTGCGTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYGMALF*FSCVLL
Trigger: GAGGAGCACGCAGCTGAACAAGAAGAGGGCCATACC...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACTTCATCAAGCTGATATaGTTGATGGTCAACCAGCCC +
Preference number: 5 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHFIKLI*LMVNQP
Trigger: GGGCTGGTTGACCATCAACAATATCAGCTTGATGAA...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CCAGCATGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTTTCTCCTCCTCATCCTaGTACCAAGACAATGACTCA +
Preference number: 5 (lower is better)
Translates to: PAWRASSRAQTTKTVLHCFSSSS*YQDNDS
Trigger: TGAGTCATTGTCTTGGTACAAGGATGAGGAGGAGAA...ACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGGCTCACTTCTCCTCCTCATCCTaGTACCAAGACAATGACTCA +
Preference number: 5 (lower is better)
Translates to: YIQLEPGGSALDLLGLAHFSSSS*YQDNDS
Trigger: TGAGTCATTGTCTTGGTACAAGGATGAGGAGGAGAA...GTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GAAAGGTGGGCAGTTCCTGGACCCCAGAAAGAACAAAGGCTCTGGAGGAGCTCCAAGGCCTTTGTGTTGTaGATCATGAGGTGCATGATG +
Preference number: 5 (lower is better)
Translates to: ERWAVPGPQKEQRLWRSSKAFVL*IMRCMM
Trigger: CATCATGCACCTCATGATCAACAACACAAAGGCCTT...GGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACACAGGGGAGATGCCTTaGTTGGTGCCTGTGACCCGG +
Preference number: 5 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHTGEMP*LVPVTR
Trigger: CCGGGTCACAGGCACCAACAAAGGCATCTCCCCTGT...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp GCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGACCTGCTGGGCCTGATGAAGGCCTTTGTGTaGTTGATCATGAGGTGCATG +
Preference number: 5 (lower is better)
Translates to: ALYIQLEPGGSALDLLGLMKAFV*LIMRCM
Trigger: CATGCACCTCATGATCAACAACACAAAGGCCTTCAT...CAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACGTGGCCGCTGGTGTTTaGGAGCCACGTGTCATCGAC +
Preference number: 5 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHVAAGV*EPRVID
Trigger: GTCGATGACACGTGGCTCCAAAACACCAGCGGCCAC...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TGGAGGGCAAGTAGCAGGGCCCAGACCACCAAAACTGTCCTACACTGTGGGTGCTTCAAACTCGGCTCTTaGAGTTTTACAAGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: WRASSRAQTTKTVLHCGCFKLGS*SFTSCF
Trigger: AAAACAGCTTGTAAAACTCAAAGAGCCGAGTTTGAA...GCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000072362.14
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTTGAGGGCGTCTGAGTaGGCCAAGTCCATGTTGGCA +
Preference number: 5 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHLRASE*AKSMLA
Trigger: TGCCAACATGGACTTGGCCAACTCAGACGCCCTCAA...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGAGAAGAATCTGGTCCTaGGTTCTCCCTTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: NMAKGALYIQLEPGGSALRRIWS*VLPSRS
Trigger: GGAGCGAGAAGGGAGAACCAAGGACCAGATTCTTCT...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTCCCGGATCTTGAGGTaGTCCAGTGGCAGCATGTAC +
Preference number: 5 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHSRILR*SSGSMY
Trigger: GTACATGCTGCCACTGGACAACCTCAAGATCCGGGA...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACTGCAGGATCATGTCCTaGATCTGGTACTCGATGTCT +
Preference number: 5 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYCRIMS*IWYSMS
Trigger: AGACATCGAGTACCAGATCAAGGACATGATCCTGCA...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACTCAGGCCGGAAATTCTaGTACTCTTCCACTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYSGRKF*YSSTSF
Trigger: GAAGGAAGTGGAAGAGTACAAGAATTTCCGGCCTGA...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGGCAAACACGTGCTTGTaGGACATGAAGCCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: NMAKGALYIQLEPGGSALANTCL*DMKPFS
Trigger: GGAAAAGGGCTTCATGTCCAACAAGCACGTGTTTGC...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS TCA 90 bp CCATCTTTACCAGTTCAAAGGGAAAGCGCTCATGAAAGATACGATTaGTGCGGGCTCCACCAGACAACTCTAGTGTGTCTACTTGATCTC +
Preference number: 5 (lower is better)
Translates to: PSLPVQRESAHERYD*CGLHQTTLVCLLDL
Trigger: GAGATCAAGTAGACACACTAGAGTTGTCTGGTGGAGCCCGCATCAATCGTATCTTTCATGAGCGCTTTCCCTTTGAACTGGTAAAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000172833.2
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS-3UTR CAA 90 bp TTAATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGCAGGATCATGTCCTaGATCTGGTACTCGATGTCT +
Preference number: 5 (lower is better)
Translates to: LIWPKELYIYNLSQVGQHCRIMS*IWYSMS
Trigger: AGACATCGAGTACCAGATCAAGGACATGATCCTGCA...GTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp CTGGGCTGGGCTCAGCTTGTGTGGTTAATATGGCCAAAGGAGCTCTATATATACTCTTCATGGTTTGTGTaGATGTACGACTGCTCAATG +
Preference number: 5 (lower is better)
Translates to: LGWAQLVWLIWPKELYIYSSWFV*MYDCSM
Trigger: CATTGAGCAGTCGTACATCAACACAAACCATGAAGA...GTATATATAGAGCTCCTTTGGCCATATTAACCACACAAGCTGAGCCCAGCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGTTCTCCTCCTCATCCTaGTACCAAGACAATGACTCA +
Preference number: 5 (lower is better)
Translates to: NMAKGALYIQLEPGGSALFSSSS*YQDNDS
Trigger: TGAGTCATTGTCTTGGTACAAGGATGAGGAGGAGAA...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGTCCGCATATTCTGTTTaGGAAAAGATGAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: NMAKGALYIQLEPGGSALSAYSV*EKMSCR
Trigger: TCTGCAGCTCATCTTTTCCAAAACAGAATATGCGGA...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS-3UTR CAA 90 bp AATATGGCCAAAGGAGCTCTATATATACAACTTGAGCCAGGTGGGTCAGCACTGTCTTCATGGTTTGTGTaGATGTACGACTGCTCAATG +
Preference number: 5 (lower is better)
Translates to: NMAKGALYIQLEPGGSALSSWFV*MYDCSM
Trigger: CATTGAGCAGTCGTACATCAACACAAACCATGAAGA...CAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTGGCCATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000173397.8
CDS CCA 72 bp CCCGCACTGCAGGTGGCCGGCCTGGTGGGTGCACACTaGACACAGGTCGGCGCTGTGGAGTGGGGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: PALQVAGLVGAH*TQVGAVEWGCG
Trigger: GCCACAGCCCCACTCCACAGCGCCGACCTGTGTCCAGTGTGCACCCACCAGGCCGGCCACCTGCAGTGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS CCA 72 bp CCCCGGTGTAGGACCCCGCACTGCAGGTGGCCGGCCTaGTGGGTGCACACTGGACACAGGTCGGCGCTGTGG +
Preference number: 6 (lower is better)
Translates to: PRCRTPHCRWPA*WVHTGHRSALW
Trigger: CCACAGCGCCGACCTGTGTCCAGTGTGCACCCACCAGGCCGGCCACCTGCAGTGCGGGGTCCTACACCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS GCA 72 bp GTAGGACCCCGCACTGCAGGTGGCCGGCCTGGTGGGTaGACACTGGACACAGGTCGGCGCTGTGGAGTGGGG +
Preference number: 6 (lower is better)
Translates to: VGPRTAGGRPGG*TLDTGRRCGVG
Trigger: CCCCACTCCACAGCGCCGACCTGTGTCCAGTGTGCACCCACCAGGCCGGCCACCTGCAGTGCGGGGTCCTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS CCA 72 bp CGGTGTAGGACCCCGCACTGCAGGTGGCCGGCCTGGTaGGTGCACACTGGACACAGGTCGGCGCTGTGGAGT +
Preference number: 6 (lower is better)
Translates to: RCRTPHCRWPAW*VHTGHRSALWS
Trigger: ACTCCACAGCGCCGACCTGTGTCCAGTGTGCACCCACCAGGCCGGCCACCTGCAGTGCGGGGTCCTACACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS CCA 72 bp GCCTGGTGGGTGCACACTGGACACAGGTCGGCGCTGTaGAGTGGGGCTGTGGCCGCTGGTGTTTTGGAGCCA +
Preference number: 6 (lower is better)
Translates to: AWWVHTGHRSAL*SGAVAAGVLEP
Trigger: TGGCTCCAAAACACCAGCGGCCACAGCCCCACTCCACAGCGCCGACCTGTGTCCAGTGTGCACCCACCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS GCA 72 bp GCTGGTTCAGGGTTTTCTGCAAGTGTGGGGTGCCCATaGGGTCAGCCATGTGCCGGTAGGCTGGGTGGGAGA +
Preference number: 6 (lower is better)
Translates to: AGSGFSASVGCP*GQPCAGRLGGR
Trigger: TCTCCCACCCAGCCTACCGGCACATGGCTGACCGCATGGGCACCCCACACTTGCAGAAAACCCTGAACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS GCA 72 bp GCTGGGCACTCCTGGAGGGATACCAGGGGGAATCCGTaGTGGCCGAGATGGTATCTGAGGTGGCGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: AGHSWRDTRGNP*WPRWYLRWRRE
Trigger: TTCTCTGCGCCACCTCAGATACCATCTCGGCCAGCACGGATTCCCCCTGGTATCCCTCCAGGAGTGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000172482.8
CDS GCA 72 bp CCTGGGCACTCCTGGAGGGATACCAGGGGGAATCCGTaGTGGCCGAGATGGTATCTGAGGTGGCGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: PGHSWRDTRGNP*WPRWYLRWRRE
Trigger: TTCTCTGCGCCACCTCAGATACCATCTCGGCCAGCACGGATTCCCCCTGGTATCCCTCCAGGAGTGCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165766.9
ENSMUST00000174050.8
CDS CCA 72 bp TGGCAAACACACTCTGTGGTCCAGGCCGGGATGGGATaGGAGGTGCTGAGAAGGAGGATGTGGCCCCCACAG +
Preference number: 6 (lower is better)
Translates to: WQTHSVVQAGMG*EVLRRRMWPPQ
Trigger: CTGTGGGGGCCACATCCTCCTTCTCAGCACCTCCCATCCCATCCCGGCCTGGACCACAGAGTGTGTTTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS GCA 72 bp TCTGGGCACTCCTGGAGGGATACCAGGGGGAATCCGTaGTGGCCGAGATGGTATCTGAGGTGGCGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: SGHSWRDTRGNP*WPRWYLRWRRE
Trigger: TTCTCTGCGCCACCTCAGATACCATCTCGGCCAGCACGGATTCCCCCTGGTATCCCTCCAGGAGTGCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173397.8
CDS CCA 72 bp GTTGGTCAGTTGCTGGTTCAGGGTTTTCTGCAAGTGTaGGGTGCCCATGCGGTCAGCCATGTGCCGGTAGGC +
Preference number: 6 (lower is better)
Translates to: VGQLLVQGFLQV*GAHAVSHVPVG
Trigger: GCCTACCGGCACATGGCTGACCGCATGGGCACCCCACACTTGCAGAAAACCCTGAACCAGCAACTGACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS CCA 72 bp ACCAGCCCCTGCGGATCACCAAGATCTCCCCCTGATTaGGTATGGCCCTCTTCTTGTTCAGCTGCGTGCTCC +
Preference number: 6 (lower is better)
Translates to: TSPCGSPRSPPD*VWPSSCSAACS
Trigger: GGAGCACGCAGCTGAACAAGAAGAGGGCCATACCCAATCAGGGGGAGATCTTGGTGATCCGCAGGGGCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072362.14
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000172833.2
ENSMUST00000173397.8
CDS CCA 72 bp TGGAGGGATACCAGGGGGAATCCGTGCTGGCCGAGATaGTATCTGAGGTGGCGCAGAGAAGGGGTCGTTGTT +
Preference number: 6 (lower is better)
Translates to: WRDTRGNPCWPR*YLRWRREGVVV
Trigger: AACAACGACCCCTTCTCTGCGCCACCTCAGATACCATCTCGGCCAGCACGGATTCCCCCTGGTATCCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS TCA 72 bp GTCAACCAGCCCCTGCGGATCACCAAGATCTCCCCCTaGTTGGGTATGGCCCTCTTCTTGTTCAGCTGCGTG +
Preference number: 6 (lower is better)
Translates to: VNQPLRITKISP*LGMALFLFSCV
Trigger: CACGCAGCTGAACAAGAAGAGGGCCATACCCAATCAGGGGGAGATCTTGGTGATCCGCAGGGGCTGGTTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000072362.14
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000172833.2
ENSMUST00000173397.8
CDS TCA 72 bp ATACCAGGGGGAATCCGTGCTGGCCGAGATGGTATCTaGGGTGGCGCAGAGAAGGGGTCGTTGTTGGCAAAC +
Preference number: 6 (lower is better)
Translates to: IPGGIRAGRDGI*GGAEKGSLLAN
Trigger: GTTTGCCAACAACGACCCCTTCTCTGCGCCACCTCAGATACCATCTCGGCCAGCACGGATTCCCCCTGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS GCA 72 bp GTAGGCTGGGTGGGAGAGGAAGAATTTCCTCTCGGCTaGCAGAGCAGCCCGGATGTCCTTTTTGCCCTCGAT +
Preference number: 6 (lower is better)
Translates to: VGWVGEEEFPLG*QSSPDVLFALD
Trigger: ATCGAGGGCAAAAAGGACATCCGGGCTGCTCTGGCAGCCGAGAGGAAATTCTTCCTCTCCCACCCAGCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS GCA 72 bp CGGATGTGGTTGGTCAGTTGCTGGTTCAGGGTTTTCTaGAAGTGTGGGGTGCCCATGCGGTCAGCCATGTGC +
Preference number: 6 (lower is better)
Translates to: RMWLVSCWFRVF*KCGVPMRSAMC
Trigger: GCACATGGCTGACCGCATGGGCACCCCACACTTGCAGAAAACCCTGAACCAGCAACTGACCAACCACATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS CCA 72 bp ATGGTATCTGAGGTGGCGCAGAGAAGGGGTCGTTGTTaGCAAACACACTCTGTGGTCCAGGCCGGGATGGGA +
Preference number: 6 (lower is better)
Translates to: MVSEVAQRRGRC*QTHSVVQAGMG
Trigger: TCCCATCCCGGCCTGGACCACAGAGTGTGTTTGCCAACAACGACCCCTTCTCTGCGCCACCTCAGATACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS CAA 72 bp TTCCTCTCGGCTGCCAGAGCAGCCCGGATGTCCTTTTaGCCCTCGATGTCTTTCTGGCTTCGGTTAACCACG +
Preference number: 6 (lower is better)
Translates to: FLSAARAARMSF*PSMSFWLRLTT
Trigger: CGTGGTTAACCGAAGCCAGAAAGACATCGAGGGCAAAAAGGACATCCGGGCTGCTCTGGCAGCCGAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8
CDS CCA 72 bp TTCTCAAGGGCAGTAGCTTGTTTTCCAGGACATCCCTaGCGTCTGTGCCTTCATCCATCAAGTCTAGCTTGG +
Preference number: 6 (lower is better)
Translates to: FSRAVACFPGHP*RLCLHPSSLAW
Trigger: CCAAGCTAGACTTGATGGATGAAGGCACAGACGCCAGGGATGTCCTGGAAAACAAGCTACTGCCCTTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000072362.14
ENSMUST00000091087.13
ENSMUST00000115404.11
ENSMUST00000165766.9
ENSMUST00000172482.8
ENSMUST00000173397.8
ENSMUST00000174050.8