Pregenerated sensors for DNLZ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075467Ensembl transcript IDs: ENSMUST00000028295.9
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGTGTGTGTGGTGTGCCTCTGCCTGGATCACTCCCCTAAGCCTCTaGGCAGCGCTCTGCTCCTCGGCGGCCACCCAGAGCAGCCAGTTC | + |
|
Preference number: 1 (lower is better) Translates to: VCVWCASAWITPLSL*AALCSSAATQSSQF Trigger: GAACTGGCTGCTCTGGGTGGCCGCCGAGGAGCAGAGCGCTGCTCAGAGGCTTAGGGGAGTGATCCAGGCAGAGGCACACCACACACACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR TCA 90 bp | CTGGTTCCTGACTTGAAGGCCCACAAGCAAGGCAATCGGCTCCTCTaGCCTCGGTGTCCTCCACAGGGAGCAGGCTGGAGTCGGAGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: LVPDLKAHKQGNRLL*PRCPPQGAGWSRRL Trigger: CAGCCTCCGACTCCAGCCTGCTCCCTGTGGAGGACACCGAGGTCAGAGGAGCCGATTGCCTTGCTTGTGGGCCTTCAAGTCAGGAACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR GCA 90 bp | GCAGTGTACAAGGCCCCTGAGATCATGCAGCATGTCTCTGCTGCATaGGACAGTGAGAGGCGGGGCCAGAGCCGCTACTGCTGCTTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: AVYKAPEIMQHVSAA*DSERRGQSRYCCFL Trigger: GAGAAAGCAGCAGTAGCGGCTCTGGCCCCGCCTCTCACTGTCGCATGCAGCAGAGACATGCTGCATGATCTCAGGGGCCTTGTACACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 90 bp | CAGAGCAGCCAGTTCTGCTACAGAAACCAAACCTCAGGGCTGGGCTaGACACTAGCTCAACAACAGAAGCCACCAGGGCTGGGGGTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: QSSQFCYRNQTSGLG*TLAQQQKPPGLGVG Trigger: CCCCACCCCCAGCCCTGGTGGCTTCTGTTGTTGAGCTAGTGTCCAGCCCAGCCCTGAGGTTTGGTTTCTGTAGCAGAACTGGCTGCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGCCTCTaGCTGGATCACTCCCCTAAGCCTCTGAGCAGCGCTCTGCTCCTC | + |
|
Preference number: 1 (lower is better) Translates to: CVCVCVCVCVCVVCL*LDHSPKPLSSALLL Trigger: GAGGAGCAGAGCGCTGCTCAGAGGCTTAGGGGAGTGATCCAGGCAGAGGCACACCACACACACACACACACACACACACACACACACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 90 bp | TCTGACCTCGGTGTCCTCCACAGGGAGCAGGCTGGAGTCGGAGGCTaGCTCTTCCTCCAGGATGTGACAGTTTGTACAAATGGCACAGGA | + |
|
Preference number: 1 (lower is better) Translates to: SDLGVLHREQAGVGG*LFLQDVTVCTNGTG Trigger: TCCTGTGCCATTTGTACAAACTGTCACATCCTGGAGGAAGAGCCAGCCTCCGACTCCAGCCTGCTCCCTGTGGAGGACACCGAGGTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR GCA 90 bp | ATGGTATTGGCTTACCCAGTGCAGTGTACAAGGCCCCTGAGATCATaGAGCATGTCTCTGCTGCATGCGACAGTGAGAGGCGGGGCCAGA | + |
|
Preference number: 1 (lower is better) Translates to: MVLAYPVQCTRPLRS*SMSLLHATVRGGAR Trigger: TCTGGCCCCGCCTCTCACTGTCGCATGCAGCAGAGACATGCTGCATGATCTCAGGGGCCTTGTACACTGCACTGGGTAAGCCAATACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR TCA 90 bp | ACAGGGAGCAGGCTGGAGTCGGAGGCTGGCTCTTCCTCCAGGATGTaGCAGTTTGTACAAATGGCACAGGAGGCTAGGGTGGGGATAATA | + |
|
Preference number: 1 (lower is better) Translates to: TGSRLESEAGSSSRM*QFVQMAQEARVGII Trigger: TATTATCCCCACCCTAGCCTCCTGTGCCATTTGTACAAACTGTCACATCCTGGAGGAAGAGCCAGCCTCCGACTCCAGCCTGCTCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 90 bp | CTCAAGACAGGAGGATTGAGAGGTGCAGGCAGCTCATGGGTGGTGTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGC | + |
|
Preference number: 1 (lower is better) Translates to: LKTGGLRGAGSSWVV*CVCVCVCVCVCVVC Trigger: GCACACCACACACACACACACACACACACACACACACACACACCACACCACCCATGAGCTGCCTGCACCTCTCAATCCTCCTGTCTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 90 bp | AACAATTCCAGGCTGTCAGGAACCTGGCCACATGATTGGGAACTGTaGCCCGTGGTGAGTCTGCAGAACACGGTGAGGTATGGACTCTGC | + |
|
Preference number: 1 (lower is better) Translates to: NNSRLSGTWPHDWEL*PVVSLQNTVRYGLC Trigger: GCAGAGTCCATACCTCACCGTGTTCTGCAGACTCACCACGGGCCACAGTTCCCAATCATGTGGCCAGGTTCCTGACAGCCTGGAATTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR TCA 90 bp | GACTTCACAAGAGAAAAACAGGAGCCCAGGCCCGGTGCCTGGAGGTaGTGGCTTTTTACTGACAAGGAACAGCAGCAGGCTTGTGAGGCT | + |
|
Preference number: 1 (lower is better) Translates to: DFTREKQEPRPGAWR*WLFTDKEQQQACEA Trigger: AGCCTCACAAGCCTGCTGCTGTTCCTTGTCAGTAAAAAGCCATCACCTCCAGGCACCGGGCCTGGGCTCCTGTTTTTCTCTTGTGAAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR TCA 90 bp | TCATCACTTCCATGCATCTCCTCTTGGACCTCAAGACAGGAGGATTaGGAGGTGCAGGCAGCTCATGGGTGGTGTGGTGTGTGTGTGTGT | + |
|
Preference number: 1 (lower is better) Translates to: SSLPCISSWTSRQED*EVQAAHGWCGVCVC Trigger: ACACACACACACACCACACCACCCATGAGCTGCCTGCACCTCTCAATCCTCCTGTCTTGAGGTCCAAGAGGAGATGCATGGAAGTGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 90 bp | ACTAGTCAGAACAATTCCAGGCTGTCAGGAACCTGGCCACATGATTaGGAACTGTGGCCCGTGGTGAGTCTGCAGAACACGGTGAGGTAT | + |
|
Preference number: 1 (lower is better) Translates to: TSQNNSRLSGTWPHD*ELWPVVSLQNTVRY Trigger: ATACCTCACCGTGTTCTGCAGACTCACCACGGGCCACAGTTCCCAATCATGTGGCCAGGTTCCTGACAGCCTGGAATTGTTCTGACTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR TCA 90 bp | CTGCAAGAATGGACTATGTGGAAAGTGAAGCTTCAAGTGAAATCCTaGTGCACAGGAGACCCTCCCTGGGAAGGAGGCTCTGGAGCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: LQEWTMWKVKLQVKS*CTGDPPWEGGSGAA Trigger: TGCTGCTCCAGAGCCTCCTTCCCAGGGAGGGTCTCCTGTGCATCAGGATTTCACTTGAAGCTTCACTTTCCACATAGTCCATTCTTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 90 bp | TTGGGAACTGTGGCCCGTGGTGAGTCTGCAGAACACGGTGAGGTATaGACTCTGCAAGAATGGACTATGTGGAAAGTGAAGCTTCAAGTG | + |
|
Preference number: 1 (lower is better) Translates to: LGTVARGESAEHGEV*TLQEWTMWKVKLQV Trigger: CACTTGAAGCTTCACTTTCCACATAGTCCATTCTTGCAGAGTCCATACCTCACCGTGTTCTGCAGACTCACCACGGGCCACAGTTCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 90 bp | TGTACATGCGTATTTATTGCTTACATGTGTTTGCCATGTTGTTCATaGGTCCTTTCTGACCCGAGAGGTACATTTGTTTTGTTTTACCCA | + |
|
Preference number: 1 (lower is better) Translates to: CTCVFIAYMCLPCCS*VLSDPRGTFVLFYP Trigger: TGGGTAAAACAAAACAAATGTACCTCTCGGGTCAGAAAGGACCCATGAACAACATGGCAAACACATGTAAGCAATAAATACGCATGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCCCTGAGATCATGCAGCATGTCTCTGCTGCATGCGACAGTGAGAGGCGGGGCCGCCCCCGACTGGATTaGACCCAGCCCCAGAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: APEIMQHVSAACDSERRGRPRLD*TQPQSF Trigger: GAAGCTCTGGGGCTGGGTCCAATCCAGTCGGGGGCG...GCCCCGCCTCTCACTGTCGCATGCAGCAGAGACATGCTGCATGATCTCAGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CAA 90 bp | CGGGAGGCCAGCTGCCAGAGATGGCTGCCATGGGAAGGGGATGTATaGAGAGAGCCAAGCCACCCCACAGGAGTCACGCTGGTCTGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: REASCQRWLPWEGDV*REPSHPTGVTLVWP Trigger: TGGCCAGACCAGCGTGACTCCTGTGGGGTGGCTTGGCTCTCTCAATACATCCCCTTCCCATGGCAGCCATCTCTGGCAGCTGGCCTCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR GCA 90 bp | GCCCCTGAGATCATGCAGCATGTCTCTGCTGCATGCGACAGTGAGAGGCGGGGCGGAGCCCAGGCCCGGTaGCTGGAGGTGATGGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: APEIMQHVSAACDSERRGGAQAR*LEVMAF Trigger: AAAAGCCATCACCTCCAGGCACCGGGCCTGGGCTCC...GCCCCGCCTCTCACTGTCGCATGCAGCAGAGACATGCTGCATGATCTCAGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CAA 90 bp | ACTGTGGTTGCTCTAGAGGCAGCCACGCTTCTGGGCAGGCTGAAATaGCTCAGGTGCCGGGAGGCCAGCTGCCAGAGATGGCTGCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: TVVALEAATLLGRLK*LRCREASCQRWLPW Trigger: CCATGGCAGCCATCTCTGGCAGCTGGCCTCCCGGCACCTGAGCAATTTCAGCCTGCCCAGAAGCGTGGCTGCCTCTAGAGCAACCACAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTCCCAGGAGCCAGGGAAGCATTGTGTCCGTGTCAACTGCCTTCTCCACCCCCCCCCCTGCCAGATGTTaGAGGTCACAGGGCCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: GPRSQGSIVSVSTAFSTPPPARC*RSQGPE Trigger: TTCTGGGCCCTGTGACCTTCAACATCTGGCAGGGGG...GGGGGTGGAGAAGGCAGTTGACACGGACACAATGCTTCCCTGGCTCCTGGGACC 62% GC, longest homopolymer 10 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCCCTGAGATCATGCAGCATGTCTCTGCTGCATGCGACAGTGAGAGGCGGGGCCTGCTAATCACTAGCTaGGGTCCCAGGAGCCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: APEIMQHVSAACDSERRGLLITS*GPRSQG Trigger: TCCCTGGCTCCTGGGACCCCAGCTAGTGATTAGCAG...GCCCCGCCTCTCACTGTCGCATGCAGCAGAGACATGCTGCATGATCTCAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGGGAAGCATTGTGTCCGTGTCAACTGCCTTCTCCACCCCCTGTCCCAGGATCTGTGTGTGTGTGGTGTaGCTCTGCCTGGATCACTCC | + |
|
Preference number: 2 (lower is better) Translates to: QGSIVSVSTAFSTPCPRICVCVV*LCLDHS Trigger: GGAGTGATCCAGGCAGAGGCACACCACACACACACA...GATCCTGGGACAGGGGGTGGAGAAGGCAGTTGACACGGACACAATGCTTCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGGCAATCGGCTCCTCTGACCTCGGTGTCCTCCACAGGGAGCAGGCTGGAGTCGACAGTTTGTACAAATaGCACAGGAGGCTAGGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: KAIGSSDLGVLHREQAGVDSLYK*HRRLGW Trigger: CCACCCTAGCCTCCTGTGCCATTTGTACAAACTGTC...GACTCCAGCCTGCTCCCTGTGGAGGACACCGAGGTCAGAGGAGCCGATTGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGGGAAGCATTGTGTCCGTGTCAACTGCCTTCTCCACCCCCTGTCCCAGGATCTCAAGACAGGAGGATTaGGAGGTGCAGGCAGCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: QGSIVSVSTAFSTPCPRISRQED*EVQAAH Trigger: ATGAGCTGCCTGCACCTCTCAATCCTCCTGTCTTGA...GATCCTGGGACAGGGGGTGGAGAAGGCAGTTGACACGGACACAATGCTTCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR CCA 90 bp | CAACAGGCAGAAGGCACACACACACAGGAGGTAAGTCCAAATCATGGGCTTCCCGCTGGAGTCGGAGGCTaGCTCTTCCTCCAGGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: QQAEGTHTQEVSPNHGLPAGVGG*LFLQDV Trigger: CACATCCTGGAGGAAGAGCCAGCCTCCGACTCCAGC...GGGAAGCCCATGATTTGGACTTACCTCCTGTGTGTGTGTGCCTTCTGCCTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CAA 90 bp | GTACAAATGGCACAGGAGGCTAGGGTGGGGATAATAGCAGGGTGTTaGCTGAGGGAAGGACAGGGGGTAATCGAGGGAAGGCACAGACTG | + |
|
Preference number: 2 (lower is better) Translates to: VQMAQEARVGIIAGC*LREGQGVIEGRHRL Trigger: CAGTCTGTGCCTTCCCTCGATTACCCCCTGTCCTTCCCTCAGCAAACACCCTGCTATTATCCCCACCCTAGCCTCCTGTGCCATTTGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR GCA 90 bp | TACAAGGCCCCTGAGATCATGCAGCATGTCTCTGCTGCATGCGACAGTGAGAGGAAGAAGGAGACCGACTaGACTGGGACAAAGCCACCC | + |
|
Preference number: 2 (lower is better) Translates to: YKAPEIMQHVSAACDSERKKETD*TGTKPP Trigger: GGGTGGCTTTGTCCCAGTGCAGTCGGTCTCCTTCTT...CCTCTCACTGTCGCATGCAGCAGAGACATGCTGCATGATCTCAGGGGCCTTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTGGCTTACCCAGTGCAGTGTACAAGGCCCCTGAGATCATGCAGCATGTCTCTCCACTGTGGCTATCATaGGTGGGCATGAGGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: IGLPSAVYKAPEIMQHVSPLWLS*VGMRLG Trigger: GCCCAGCCTCATGCCCACCCATGATAGCCACAGTGG...AGAGACATGCTGCATGATCTCAGGGGCCTTGTACACTGCACTGGGTAAGCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR CCA 90 bp | CAACAGGCAGAAGGCACACACACACAGGAGGTAAGTCCAAATCATGGGCTTCCCTGGTGTGCCTCTGCCTaGATCACTCCCCTAAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: QQAEGTHTQEVSPNHGLPWCASA*ITPLSL Trigger: GAGGCTTAGGGGAGTGATCCAGGCAGAGGCACACCA...GGGAAGCCCATGATTTGGACTTACCTCCTGTGTGTGTGTGCCTTCTGCCTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CAA 90 bp | TGTGGCTTCTGTTGGAATTTGTGTCAGCCTTCCCAGGACATGGTATaGGCTTACCCAGTGCAGTGTACAAGGCCCCTGAGATCATGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: CGFCWNLCQPSQDMV*AYPVQCTRPLRSCS Trigger: GCTGCATGATCTCAGGGGCCTTGTACACTGCACTGGGTAAGCCAATACCATGTCCTGGGAAGGCTGACACAAATTCCAACAGAAGCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR TCA 90 bp | TACAAGGCCCCTGAGATCATGCAGCATGTCTCTGCTGCATGCGACAGTGAGAGGAACCAAGTTAGGAGATaGAGCACACACAAGGCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: YKAPEIMQHVSAACDSERNQVRR*STHKAS Trigger: GCTTGCCTTGTGTGTGCTTCATCTCCTAACTTGGTT...CCTCTCACTGTCGCATGCAGCAGAGACATGCTGCATGATCTCAGGGGCCTTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR TCA 90 bp | CCATTACAAGCGCTGGATTATGCCAATCTAAGCCACAGAGGAACTTGTCTTCAACACTGGTTCCTGACTTaGAGGCCCACAAGCAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PLQALDYANLSHRGTCLQHWFLT*RPTSKA Trigger: TGCCTTGCTTGTGGGCCTTCAAGTCAGGAACCAGTG...TTGAAGACAAGTTCCTCTGTGGCTTAGATTGGCATAATCCAGCGCTTGTAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR GCA 90 bp | AAAATAAAAGTCTGCCAAGTGAGTGTGGCTTCTGTTGGAATTTGTGTCAGCCTTCATGTCTCTGCTGCATaGGACAGTGAGAGGCGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: KIKVCQVSVASVGICVSLHVSAA*DSERRG Trigger: GCCCCGCCTCTCACTGTCGCATGCAGCAGAGACATG...AAGGCTGACACAAATTCCAACAGAAGCCACACTCACTTGGCAGACTTTTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR CCA 90 bp | TACAAGGCCCCTGAGATCATGCAGCATGTCTCTGCTGCATGCGACAGTGAGAGGCAAGAATGGACTATGTaGAAAGTGAAGCTTCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: YKAPEIMQHVSAACDSERQEWTM*KVKLQV Trigger: CACTTGAAGCTTCACTTTCCACATAGTCCATTCTTG...CCTCTCACTGTCGCATGCAGCAGAGACATGCTGCATGATCTCAGGGGCCTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CAA 90 bp | CCCAAAAATAAAAGTCTGCCAAGTGAGTGTGGCTTCTGTTGGAATTaGTGTCAGCCTTCCCAGGACATGGTATTGGCTTACCCAGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PKNKSLPSECGFCWN*CQPSQDMVLAYPVQ Trigger: CTGCACTGGGTAAGCCAATACCATGTCCTGGGAAGGCTGACACAAATTCCAACAGAAGCCACACTCACTTGGCAGACTTTTATTTTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAATAAAAGTCTGCCAAGTGAGTGTGGCTTCTGTTGGAATTTGTGTCAGCCTTACCTGGCCACATGATTaGGAACTGTGGCCCGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KIKVCQVSVASVGICVSLTWPHD*ELWPVV Trigger: CACCACGGGCCACAGTTCCCAATCATGTGGCCAGGT...AAGGCTGACACAAATTCCAACAGAAGCCACACTCACTTGGCAGACTTTTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR TCA 90 bp | AAAATAAAAGTCTGCCAAGTGAGTGTGGCTTCTGTTGGAATTTGTGTCAGCCTTCTTCAAGTGAAATCCTaGTGCACAGGAGACCCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: KIKVCQVSVASVGICVSLLQVKS*CTGDPP Trigger: GGGAGGGTCTCCTGTGCATCAGGATTTCACTTGAAG...AAGGCTGACACAAATTCCAACAGAAGCCACACTCACTTGGCAGACTTTTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR TCA 90 bp | CCATTACAAGCGCTGGATTATGCCAATCTAAGCCACAGAGGAACTTGTCTTCAAGCCACAGAGTTGTTCTaGCTTCACAAGAGAAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: PLQALDYANLSHRGTCLQATELF*LHKRKT Trigger: TGTTTTTCTCTTGTGAAGTCAGAACAACTCTGTGGC...TTGAAGACAAGTTCCTCTGTGGCTTAGATTGGCATAATCCAGCGCTTGTAATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR TCA 72 bp | TGGTGTGCCTCTGCCTGGATCACTCCCCTAAGCCTCTaGGCAGCGCTCTGCTCCTCGGCGGCCACCCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: WCASAWITPLSL*AALCSSAATQS Trigger: GCTCTGGGTGGCCGCCGAGGAGCAGAGCGCTGCTCAGAGGCTTAGGGGAGTGATCCAGGCAGAGGCACACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR GCA 72 bp | GCAGCCACGCTTCTGGGCAGGCTGAAATTGCTCAGGTaGCGGGAGGCCAGCTGCCAGAGATGGCTGCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: AATLLGRLKLLR*REASCQRWLPW Trigger: CCATGGCAGCCATCTCTGGCAGCTGGCCTCCCGGCACCTGAGCAATTTCAGCCTGCCCAGAAGCGTGGCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 72 bp | AGGTGCCGGGAGGCCAGCTGCCAGAGATGGCTGCCATaGGAAGGGGATGTATTGAGAGAGCCAAGCCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: RCREASCQRWLP*EGDVLREPSHP Trigger: GGGGTGGCTTGGCTCTCTCAATACATCCCCTTCCCATGGCAGCCATCTCTGGCAGCTGGCCTCCCGGCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR GCA 72 bp | CTCTGCTCCTCGGCGGCCACCCAGAGCAGCCAGTTCTaGTACAGAAACCAAACCTCAGGGCTGGGCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: LCSSAATQSSQF*YRNQTSGLGWT Trigger: TGTCCAGCCCAGCCCTGAGGTTTGGTTTCTGTAGCAGAACTGGCTGCTCTGGGTGGCCGCCGAGGAGCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR GCA 72 bp | AAGGCCCCTGAGATCATGCAGCATGTCTCTGCTGCATaGGACAGTGAGAGGCGGGGCCAGAGCCGCTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: KAPEIMQHVSAA*DSERRGQSRYC Trigger: GCAGTAGCGGCTCTGGCCCCGCCTCTCACTGTCGCATGCAGCAGAGACATGCTGCATGATCTCAGGGGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 72 bp | TGCACTGGGACAAAGCCACCCCCGAAGCCACCACTGTaGCTATCATGGGTGGGCATGAGGCTGGGCTCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: CTGTKPPPKPPL*LSWVGMRLGSY Trigger: GTAGGAGCCCAGCCTCATGCCCACCCATGATAGCCACAGTGGTGGCTTCGGGGGTGGCTTTGTCCCAGTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR TCA 72 bp | GACTTGAAGGCCCACAAGCAAGGCAATCGGCTCCTCTaGCCTCGGTGTCCTCCACAGGGAGCAGGCTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: DLKAHKQGNRLL*PRCPPQGAGWS Trigger: ACTCCAGCCTGCTCCCTGTGGAGGACACCGAGGTCAGAGGAGCCGATTGCCTTGCTTGTGGGCCTTCAAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR GCA 72 bp | GGCAGGCTGAAATTGCTCAGGTGCCGGGAGGCCAGCTaGCAGAGATGGCTGCCATGGGAAGGGGATGTATTG | + |
|
Preference number: 3 (lower is better) Translates to: GRLKLLRCREAS*QRWLPWEGDVL Trigger: CAATACATCCCCTTCCCATGGCAGCCATCTCTGGCAGCTGGCCTCCCGGCACCTGAGCAATTTCAGCCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 72 bp | CCTCCCAGGGCCCAGAGTGAACTGCTAATCACTAGCTaGGGTCCCAGGAGCCAGGGAAGCATTGTGTCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: PPRAQSELLITS*GPRSQGSIVSV Trigger: CACGGACACAATGCTTCCCTGGCTCCTGGGACCCCAGCTAGTGATTAGCAGTTCACTCTGGGCCCTGGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR GCA 72 bp | AGACCAGATCCAGCCCTACTTAAGAAGGAGACCGACTaGACTGGGACAAAGCCACCCCCGAAGCCACCACTG | + |
|
Preference number: 3 (lower is better) Translates to: RPDPALLKKETD*TGTKPPPKPPL Trigger: CAGTGGTGGCTTCGGGGGTGGCTTTGTCCCAGTGCAGTCGGTCTCCTTCTTAAGTAGGGCTGGATCTGGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 72 bp | AAATTGCTCAGGTGCCGGGAGGCCAGCTGCCAGAGATaGCTGCCATGGGAAGGGGATGTATTGAGAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: KLLRCREASCQR*LPWEGDVLREP Trigger: TGGCTCTCTCAATACATCCCCTTCCCATGGCAGCCATCTCTGGCAGCTGGCCTCCCGGCACCTGAGCAATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR TCA 72 bp | CCATGCATCTCCTCTTGGACCTCAAGACAGGAGGATTaGGAGGTGCAGGCAGCTCATGGGTGGTGTGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PCISSWTSRQED*EVQAAHGWCGV Trigger: CACACCACACCACCCATGAGCTGCCTGCACCTCTCAATCCTCCTGTCTTGAGGTCCAAGAGGAGATGCATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR GCA 72 bp | CCACCCCACAGGAGTCACGCTGGTCTGGCCAAGAGGTaGTGTGATGTTGGGGTGGTACTTTACTTAGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PPHRSHAGLAKR*CDVGVVLYLVS Trigger: GGAGACTAAGTAAAGTACCACCCCAACATCACAGCACCTCTTGGCCAGACCAGCGTGACTCCTGTGGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR GCA 72 bp | GCTTACCCAGTGCAGTGTACAAGGCCCCTGAGATCATaGAGCATGTCTCTGCTGCATGCGACAGTGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AYPVQCTRPLRS*SMSLLHATVRG Trigger: GCCTCTCACTGTCGCATGCAGCAGAGACATGCTGCATGATCTCAGGGGCCTTGTACACTGCACTGGGTAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 72 bp | GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTGTGCCTCTGCCTGGATCACTCCCCTAAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GVCVCVCVCVCV*CASAWITPLSL Trigger: GAGGCTTAGGGGAGTGATCCAGGCAGAGGCACACCACACACACACACACACACACACACACACACACACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 72 bp | GGTGTCCTCCACAGGGAGCAGGCTGGAGTCGGAGGCTaGCTCTTCCTCCAGGATGTGACAGTTTGTACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GVLHREQAGVGG*LFLQDVTVCTN Trigger: ATTTGTACAAACTGTCACATCCTGGAGGAAGAGCCAGCCTCCGACTCCAGCCTGCTCCCTGTGGAGGACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 72 bp | AGGCTGTCAGGAACCTGGCCACATGATTGGGAACTGTaGCCCGTGGTGAGTCTGCAGAACACGGTGAGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: RLSGTWPHDWEL*PVVSLQNTVRY Trigger: ATACCTCACCGTGTTCTGCAGACTCACCACGGGCCACAGTTCCCAATCATGTGGCCAGGTTCCTGACAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR TCA 72 bp | AGAGAAAAACAGGAGCCCAGGCCCGGTGCCTGGAGGTaGTGGCTTTTTACTGACAAGGAACAGCAGCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: REKQEPRPGAWR*WLFTDKEQQQA Trigger: AGCCTGCTGCTGTTCCTTGTCAGTAAAAAGCCATCACCTCCAGGCACCGGGCCTGGGCTCCTGTTTTTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR GCA 72 bp | TCTCCTCTTGGACCTCAAGACAGGAGGATTGAGAGGTaGAGGCAGCTCATGGGTGGTGTGGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SPLGPQDRRIER*RQLMGGVVCVC Trigger: ACACACACACACCACACCACCCATGAGCTGCCTGCACCTCTCAATCCTCCTGTCTTGAGGTCCAAGAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 72 bp | CAGTTCTGCTACAGAAACCAAACCTCAGGGCTGGGCTaGACACTAGCTCAACAACAGAAGCCACCAGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QFCYRNQTSGLG*TLAQQQKPPGL Trigger: CAGCCCTGGTGGCTTCTGTTGTTGAGCTAGTGTCCAGCCCAGCCCTGAGGTTTGGTTTCTGTAGCAGAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 72 bp | GGAGGATTGAGAGGTGCAGGCAGCTCATGGGTGGTGTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GGLRGAGSSWVV*CVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACCACACCACCCATGAGCTGCCTGCACCTCTCAATCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 72 bp | AACAATTCCAGGCTGTCAGGAACCTGGCCACATGATTaGGAACTGTGGCCCGTGGTGAGTCTGCAGAACACG | + |
|
Preference number: 3 (lower is better) Translates to: NNSRLSGTWPHD*ELWPVVSLQNT Trigger: CGTGTTCTGCAGACTCACCACGGGCCACAGTTCCCAATCATGTGGCCAGGTTCCTGACAGCCTGGAATTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR CAA 90 bp | CACGCTGGTCTGGCCAAGAGGTGCTGTGATGTTGGGGTGGTACTTTACTTAGTCCTCAAGACAGGAGGATaGAGAGGTGCAGGCAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: HAGLAKRCCDVGVVLYLVLKTGG*RGAGSS Trigger: TGAGCTGCCTGCACCTCTCAATCCTCCTGTCTTGAG...GACTAAGTAAAGTACCACCCCAACATCACAGCACCTCTTGGCCAGACCAGCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR TCA 72 bp | TCAGAACAATTCCAGGCTGTCAGGAACCTGGCCACATaGTTGGGAACTGTGGCCCGTGGTGAGTCTGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SEQFQAVRNLAT*LGTVARGESAE Trigger: TTCTGCAGACTCACCACGGGCCACAGTTCCCAATCATGTGGCCAGGTTCCTGACAGCCTGGAATTGTTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR TCA 72 bp | TGGTATTGGCTTACCCAGTGCAGTGTACAAGGCCCCTaGGATCATGCAGCATGTCTCTGCTGCATGCGACAG | + |
|
Preference number: 3 (lower is better) Translates to: WYWLTQCSVQGP*DHAACLCCMRQ Trigger: CTGTCGCATGCAGCAGAGACATGCTGCATGATCTCAGGGGCCTTGTACACTGCACTGGGTAAGCCAATACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR-3UTR CAA 90 bp | TACCCAGTGCAGTGTACAAGGCCCCTGAGATCATGCAGCATGTCTCTGCTGCATTCCATGCATCTCCTCTaGGACCTCAAGACAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: YPVQCTRPLRSCSMSLLHSMHLL*DLKTGG Trigger: TCCTCCTGTCTTGAGGTCCAAGAGGAGATGCATGGA...ATGCAGCAGAGACATGCTGCATGATCTCAGGGGCCTTGTACACTGCACTGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 72 bp | GCTTCTGTTGGAATTTGTGTCAGCCTTCCCAGGACATaGTATTGGCTTACCCAGTGCAGTGTACAAGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: ASVGICVSLPRT*YWLTQCSVQGP Trigger: GGGGCCTTGTACACTGCACTGGGTAAGCCAATACCATGTCCTGGGAAGGCTGACACAAATTCCAACAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR TCA 72 bp | GACTATCCCAAAGGCATGTCAAACCAAGTTAGGAGATaGAGCACACACAAGGCAAGCATGATACGGCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DYPKGMSNQVRR*STHKASMIRPS Trigger: TGAGGGCCGTATCATGCTTGCCTTGTGTGTGCTTCATCTCCTAACTTGGTTTGACATGCCTTTGGGATAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CCA 72 bp | TCTGCAGAACACGGTGAGGTATGGACTCTGCAAGAATaGACTATGTGGAAAGTGAAGCTTCAAGTGAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: SAEHGEVWTLQE*TMWKVKLQVKS Trigger: GGATTTCACTTGAAGCTTCACTTTCCACATAGTCCATTCTTGCAGAGTCCATACCTCACCGTGTTCTGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR GCA 72 bp | TATGTCTTAGCAGTTCCCATTACAAGCGCTGGATTATaGCAATCTAAGCCACAGAGGAACTTGTCTTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: YVLAVPITSAGL*QSKPQRNLSSM Trigger: CATTGAAGACAAGTTCCTCTGTGGCTTAGATTGGCATAATCCAGCGCTTGTAATGGGAACTGCTAAGACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CAA 72 bp | GCTCTAGAGGCAGCCACGCTTCTGGGCAGGCTGAAATaGCTCAGGTGCCGGGAGGCCAGCTGCCAGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ALEAATLLGRLK*LRCREASCQRW Trigger: CCATCTCTGGCAGCTGGCCTCCCGGCACCTGAGCAATTTCAGCCTGCCCAGAAGCGTGGCTGCCTCTAGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCTCCACAGGGAGCAGGCTGGAGTCGGAGGCTGGCTCTTCCTCCAGGATGTATCCTCATCCCCTTCTaGGGTGTCAGGGGGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPPQGAGWSRRLALPPGCILIPF*GVRGYS Trigger: GCTGTACCCCCTGACACCCCAGAAGGGGATGAGGAT...ACATCCTGGAGGAAGAGCCAGCCTCCGACTCCAGCCTGCTCCCTGTGGAGGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAGGAGCCAGGGAAGCATTGTGTCCGTGTCAACTGCCTTCTCCACCCCCTTGTCTGCGATGATGTaGTGGTTCTGGCAACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRSQGSIVSVSTAFSTPLSAMM*WFWQPG Trigger: CCCTGGTTGCCAGAACCACCACATCATCGCAGACAA...GGGGGTGGAGAAGGCAGTTGACACGGACACAATGCTTCCCTGGCTCCTGGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| CDS-3UTR CCA 90 bp | CAGGGAAGCATTGTGTCCGTGTCAACTGCCTTCTCCACCCCCTGTCCCAGGATCACTTTGAGATGCGCTTaGATGACCGAGTCCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGSIVSVSTAFSTPCPRITLRCA*MTESHR Trigger: TCTGTGGGACTCGGTCATCCAAGCGCATCTCAAAGT...GATCCTGGGACAGGGGGTGGAGAAGGCAGTTGACACGGACACAATGCTTCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| CDS-3UTR CCA 90 bp | TGCTACAGAAACCAAACCTCAGGGCTGGGCTGGACACTAGCTCAACAACAGAAGCCATCTTGCCAGGGTTaGGGGGATCCTCATCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CYRNQTSGLGWTLAQQQKPSCQG*GDPHPL Trigger: AAGGGGATGAGGATCCCCCCAACCCTGGCAAGATGG...CTTCTGTTGTTGAGCTAGTGTCCAGCCCAGCCCTGAGGTTTGGTTTCTGTAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CAA 72 bp | CATGATACGGCCCTCATCACTTCCATGCATCTCCTCTaGGACCTCAAGACAGGAGGATTGAGAGGTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HDTALITSMHLL*DLKTGGLRGAG Trigger: GCCTGCACCTCTCAATCCTCCTGTCTTGAGGTCCAAGAGGAGATGCATGGAAGTGATGAGGGCCGTATCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CAA 72 bp | TGTTGGAATTTGTGTCAGCCTTCCCAGGACATGGTATaGGCTTACCCAGTGCAGTGTACAAGGCCCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CWNLCQPSQDMV*AYPVQCTRPLR Trigger: TCTCAGGGGCCTTGTACACTGCACTGGGTAAGCCAATACCATGTCCTGGGAAGGCTGACACAAATTCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| 3UTR CAA 72 bp | AAAAGTCTGCCAAGTGAGTGTGGCTTCTGTTGGAATTaGTGTCAGCCTTCCCAGGACATGGTATTGGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KSLPSECGFCWN*CQPSQDMVLAY Trigger: GTAAGCCAATACCATGTCCTGGGAAGGCTGACACAAATTCCAACAGAAGCCACACTCACTTGGCAGACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| CDS-3UTR TCA 90 bp | CCCAAAAATAAAAGTCTGCCAAGTGAGTGTGGCTTCTGTTGGAATTTGTGTCAGTTAGGTTGTCTGCGATaGTGTGGTGGTTCTGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PKNKSLPSECGFCWNLCQLGCLR*CGGSGN Trigger: GTTGCCAGAACCACCACATCATCGCAGACAACCTAA...CTGACACAAATTCCAACAGAAGCCACACTCACTTGGCAGACTTTTATTTTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| CDS-3UTR CAA 90 bp | GAAGCATTGTGTCCGTGTCAACTGCCTTCTCCACCCCCTGTCCCAGGATCCCCCGCAGGTGTAGACGAGTaGATAGTGGTCCGCTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EALCPCQLPSPPPVPGSPAGVDE*IVVRFH Trigger: GTGGAAGCGGACCACTATCAACTCGTCTACACCTGC...GGGGGATCCTGGGACAGGGGGTGGAGAAGGCAGTTGACACGGACACAATGCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| CDS-3UTR CAA 90 bp | GGTCCCAGGAGCCAGGGAAGCATTGTGTCCGTGTCAACTGCCTTCTCCACCCCCGGTGATAGGCCAACTTaGAGATGCGCTTGGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: GPRSQGSIVSVSTAFSTPGDRPT*RCAWMT Trigger: GGTCATCCAAGCGCATCTCAAAGTTGGCCTATCACC...GGGGGTGGAGAAGGCAGTTGACACGGACACAATGCTTCCCTGGCTCCTGGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| CDS CCA 90 bp | GTTCCAGGGCACCGTCACCAGACACTCGGCGTACCTCCTCTCCTCTaGCTGCTAGGATCTCTTCAATATTCCTCTTCCCCTTCAGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VPGHRHQTLGVPPLL*LLGSLQYSSSPSGQ Trigger: CTGACCTGAAGGGGAAGAGGAATATTGAAGAGATCCTAGCAGCCAGAGGAGAGGAGGTACGCCGAGTGTCTGGTGACGGTGCCCTGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| CDS CCA 72 bp | CCACGCCCTGGTGATAGGCCAACTTTGAGATGCGCTTaGATGACCGAGTCCCACAGACCTTGCAGGTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: PRPGDRPTLRCA*MTESHRPCRCR Trigger: TCTACACCTGCAAGGTCTGTGGGACTCGGTCATCCAAGCGCATCTCAAAGTTGGCCTATCACCAGGGCGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| CDS CCA 72 bp | CACCGTCACCAGACACTCGGCGTACCTCCTCTCCTCTaGCTGCTAGGATCTCTTCAATATTCCTCTTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HRHQTLGVPPLL*LLGSLQYSSSP Trigger: AGGGGAAGAGGAATATTGAAGAGATCCTAGCAGCCAGAGGAGAGGAGGTACGCCGAGTGTCTGGTGACGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| CDS TCA 72 bp | CCTTCAGGTCAGAGAACCAGCTTAGGTTGTCTGCGATaGTGTGGTGGTTCTGGCAACCAGGGCAAGTCACGA | + |
|
Preference number: 6 (lower is better) Translates to: PSGQRTSLGCLR*CGGSGNQGKSR Trigger: TCGTGACTTGCCCTGGTTGCCAGAACCACCACATCATCGCAGACAACCTAAGCTGGTTCTCTGACCTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| CDS CCA 72 bp | AGGTCAGAGAACCAGCTTAGGTTGTCTGCGATGATGTaGTGGTTCTGGCAACCAGGGCAAGTCACGATGACC | + |
|
Preference number: 6 (lower is better) Translates to: RSENQLRLSAMM*WFWQPGQVTMT Trigger: GGTCATCGTGACTTGCCCTGGTTGCCAGAACCACCACATCATCGCAGACAACCTAAGCTGGTTCTCTGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| CDS CAA 72 bp | TTCCTCTTCCCCTTCAGGTCAGAGAACCAGCTTAGGTaGTCTGCGATGATGTGGTGGTTCTGGCAACCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: FLFPFRSENQLR*SAMMWWFWQPG Trigger: CCCTGGTTGCCAGAACCACCACATCATCGCAGACAACCTAAGCTGGTTCTCTGACCTGAAGGGGAAGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||
| CDS CAA 90 bp | TCTTCAATATTCCTCTTCCCCTTCAGGTCAGAGAACCAGCTTAGGTaGTCTGCGATGATGTGGTGGTTCTGGCAACCAGGGCAAGTCACG | + |
|
Preference number: 6 (lower is better) Translates to: SSIFLFPFRSENQLR*SAMMWWFWQPGQVT Trigger: CGTGACTTGCCCTGGTTGCCAGAACCACCACATCATCGCAGACAACCTAAGCTGGTTCTCTGACCTGAAGGGGAAGAGGAATATTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028295.9 |
||