Pregenerated sensors for DNER (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036766Ensembl transcript IDs: ENSMUST00000049126.13, ENSMUST00000185606.3, ENSMUST00000191546.3
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | CTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACAAAAGCCCATCCTTGTaGAAGTATACAGTGTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: LFIFLTLLRKPASHIKRNKSPSL*KYTVLR Trigger: TCTCAACACTGTATACTTCAACAAGGATGGGCTTTT...GTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR TCA 90 bp | ACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACTCTTCCTACATAAGGGTGGCGGGGACAGGCTaGAGCTGTCTGGGTGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: TLLRKPASHIKRNSSYIRVAGTG*SCLGAV Trigger: CACGGCACCCAGACAGCTTCAGCCTGTCCCCGCCAC...CCTTATGTAGGAAGAGTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | ACACTACAGAAGGGACTGGCACCTCTTACATGTCACTACCTCTTAGCAAGAAACTGTCAGGCTCCTGGGTaGCGGGGACAGGCTGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: TLQKGLAPLTCHYLLARNCQAPG*RGQAEA Trigger: AGCTTCAGCCTGTCCCCGCCACCCAGGAGCCTGACA...GTTTCTTGCTAAGAGGTAGTGACATGTAAGAGGTGCCAGTCCCTTCTGTAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | CATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCGCCAAGCAGCCGCTTTaGGGCCCAGCACCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HHTLFIFLTLLRKPASHIAKQPL*GPAPSS Trigger: GCTGCTGGGTGCTGGGCCCCAAAGCGGCTGCTTGGC...GATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR TCA 90 bp | AAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCATTCAGGCTAGGAATAGCCGAGGCATGTTGGTaGGGCTCTCGGCCATGTGCC | + |
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Preference number: 4 (lower is better) Translates to: KLPMHRIRKRLIPFRLGIAEACW*GSRPCA Trigger: GGCACATGGCCGAGAGCCTCACCAACATGCCTCGGC...TATTCCTAGCCTGAATGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | TATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACCCCAGCGGGACAGGTaGAGCTGTAGCGGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YASYSIYFPNSTQKAGITPQRDR*SCSGAQ Trigger: CTGAGCCCCGCTACAGCTGCACCTGTCCCGCTGGGG...TGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | ACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACTCTTCCTACATAAGGCAGGCTGAAGCTGTCTaGGTGCCGTGGACTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: TLLRKPASHIKRNSSYIRQAEAV*VPWTLS Trigger: GGACAGAGTCCACGGCACCCAGACAGCTTCAGCCTG...CCTTATGTAGGAAGAGTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | TCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACTCTTCCTACATAAGGTTACCCGGGTGCACAGATaGACGTGCCATTCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: STQKAGITHQKKLFLHKVTRVHR*TCHSAP Trigger: AGGGGCTGAATGGCACGTGCATCTGTGCACCCGGGT...AACCTTATGTAGGAAGAGTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | GTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCATTCAGGCTAGGAATAATGCTGTCTGGGTGCCGTaGACTCTGTCCAGCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTHAQNKKEANSIQARNNAVWVP*TLSSQR Trigger: CCTCTGGCTGGACAGAGTCCACGGCACCCAGACAGC...ATTATTCCTAGCCTGAATGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | ACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACTCTTCCTACATAAGGCAGCTCGCCTCATTCTaGCAGGGTTTCCTCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLLRKPASHIKRNSSYIRQLASF*QGFLWQ Trigger: CTGCCAGAGGAAACCCTGCCAGAATGAGGCGAGCTG...CCTTATGTAGGAAGAGTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | CTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACGGCCGGGAGGAGCCCTaGTACTCGATGCGGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFIFLTLLRKPASHIKRNGREEP*YSMRLM Trigger: CATCAGCCGCATCGAGTACCAGGGCTCCTCCCGGCC...GTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR TCA 90 bp | TCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACTCTTCCTACATAAGGTTCACACTCTTCACCTGTaGACCCGGGTGCACAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: STQKAGITHQKKLFLHKVHTLHL*TRVHRC Trigger: GCATCTGTGCACCCGGGTTCACAGGTGAAGAGTGTG...AACCTTATGTAGGAAGAGTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | ACACTACAGAAGGGACTGGCACCTCTTACATGTCACTACCTCTTAGCAAGAAACCATGGTGACAAGGGTTaGTGGCACAAGGATCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: TLQKGLAPLTCHYLLARNHGDKG*WHKDLQ Trigger: TTGCAGATCCTTGTGCCAGCAACCCTTGTCACCATG...GTTTCTTGCTAAGAGGTAGTGACATGTAAGAGGTGCCAGTCCCTTCTGTAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | CATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCCTGAAGCTGTCTGGGTaGCGTGGACTCTGTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: HHTLFIFLTLLRKPASHILKLSG*RGLCPA Trigger: GGCTGGACAGAGTCCACGGCACCCAGACAGCTTCAG...GATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | GTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCATTCAGGCTAGGAATAATGGCACTTGTAGCTGGTaGCCACGCTACGGCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: VTHAQNKKEANSIQARNNGTCSW*PRYGTC Trigger: GCATGTGCCGTAGCGTGGGCACCAGCTACAAGTGCC...ATTATTCCTAGCCTGAATGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | AACAGTGCAGAAAATAAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCAAGGCCCCCTGGAGCCTaGAGGGGTGTCACACTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: NSAENKLPMHRIRKRLIPRPPGA*RGVTLR Trigger: TCGAAGTGTGACACCCCTCCAGGCTCCAGGGGGCCT...TGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTTATTTTCTGCACTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | AACAGTGCAGAAAATAAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCATGGCAGTGTCACGGTTaGCTGAGAGCGGGGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSAENKLPMHRIRKRLIPWQCHG*LRAGQD Trigger: ATCCTGCCCCGCTCTCAGGCAACCGTGACACTGCCA...TGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTTATTTTCTGCACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | CTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACAGGCTCTCGGCCATGTaGCCAGACTTCCACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFIFLTLLRKPASHIKRNRLSAM*PDFHCR Trigger: CCTGCAGTGGAAGTCTGGGCACATGGCCGAGAGCCT...GTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | ACACTACAGAAGGGACTGGCACCTCTTACATGTCACTACCTCTTAGCAAGAAACTGGCAGGGTTTCCTCTaGCAGGCATCAAATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLQKGLAPLTCHYLLARNWQGFL*QASNSS Trigger: TGAAGAATTTGATGCCTGCCAGAGGAAACCCTGCCA...GTTTCTTGCTAAGAGGTAGTGACATGTAAGAGGTGCCAGTCCCTTCTGTAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | CATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCAGAGGCACTTGTAGCTaGTGCCCACGCTACGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HHTLFIFLTLLRKPASHIRGTCS*CPRYGT Trigger: TGTGCCGTAGCGTGGGCACCAGCTACAAGTGCCTCT...GATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | TATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACAGAACTCCTCATAGGCTaGCCGGGAGGAGCCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YASYSIYFPNSTQKAGITELLIG*PGGALV Trigger: TACCAGGGCTCCTCCCGGCCAGCCTATGAGGAGTTC...TGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | GTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCATTCAGGCTAGGAATAATCAAACTGACAATAGGTaGCAGAGACCCCAGCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTHAQNKKEANSIQARNNQTDNR*QRPQRD Trigger: GTCCCGCTGGGGTCTCTGGCACCTATTGTCAGTTTG...ATTATTCCTAGCCTGAATGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | ATTATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCAAGAGGTAGCTGTCGCTaGTGCTGCTGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: IMHHTLFIFLTLLRKPASRGSCR*CCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAGCGACAGCTACCTCT...TGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | TATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACAGTGCACAGATGCACGTaGCATTCAGCCCCTCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: YASYSIYFPNSTQKAGITVHRCT*HSAPRC Trigger: ACAGCGAGGGGCTGAATGGCACGTGCATCTGTGCAC...TGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | AAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCATTCAGGCTAGGAATAACCTGTGAACCCGGGTaGACAGATGCACGTGCCATT | + |
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Preference number: 4 (lower is better) Translates to: KLPMHRIRKRLIPFRLGITCEPG*TDARAI Trigger: AATGGCACGTGCATCTGTGCACCCGGGTTCACAGGT...TATTCCTAGCCTGAATGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | AAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCATTCAGGCTAGGAATAGGCATGCCGGATGGATaGGATGGCATTGCTGAACTC | + |
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Preference number: 4 (lower is better) Translates to: KLPMHRIRKRLIPFRLGIGMPDG*DGIAEL Trigger: GAGTTCAGCAATGCCATCGCATCCATCCGGCATGCC...TATTCCTAGCCTGAATGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | GTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCATTCAGGCTAGGAATAATTTCCCAAACCTGGCATaGCGGATGGATGCGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: VTHAQNKKEANSIQARNNFPNLA*RMDAMA Trigger: TGCCATCGCATCCATCCGGCATGCCAGGTTTGGGAA...ATTATTCCTAGCCTGAATGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | TATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACATGCTGCTGCTGCTGCTaGTGCAGTTACCATGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: YASYSIYFPNSTQKAGITCCCCC*CSYHGD Trigger: GTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCA...TGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | AAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCATTCAGGCTAGGAATATGCCCTGTTTTTGGCTaGCAAGTTGGCAGTGTCACG | + |
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Preference number: 4 (lower is better) Translates to: KLPMHRIRKRLIPFRLGICPVFG*QVGSVT Trigger: CGTGACACTGCCAACTTGGCAGCCAAAAACAGGGCA...TATTCCTAGCCTGAATGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | AAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCATTCAGGCTAGGAATAACTTCTTCCCAAACCTaGCATGCCGGATGGATGCGA | + |
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Preference number: 4 (lower is better) Translates to: KLPMHRIRKRLIPFRLGITSSQT*HAGWMR Trigger: TCGCATCCATCCGGCATGCCAGGTTTGGGAAGAAGT...TATTCCTAGCCTGAATGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR TCA 90 bp | TATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACTGCAGTTACCATGGTaGCAAGGGTTGCTGGCACAA | + |
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Preference number: 4 (lower is better) Translates to: YASYSIYFPNSTQKAGITLQLPW*QGLLAQ Trigger: TTGTGCCAGCAACCCTTGTCACCATGGTAACTGCAG...TGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR TCA 90 bp | TATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACAATGAGGGAACACTGTTaGAAGCCTGTGGCTGTGACC | + |
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Preference number: 4 (lower is better) Translates to: YASYSIYFPNSTQKAGITMREHC*KPVAVT Trigger: GGTCACAGCCACAGGCTTTCAACAGTGTTCCCTCAT...TGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | TATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACATGCTGCTGCTGCTGCTaGAGTTACCATGGTGACAAG | + |
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Preference number: 4 (lower is better) Translates to: YASYSIYFPNSTQKAGITCCCCC*SYHGDK Trigger: CTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCA...TGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | AACAGTGCAGAAAATAAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCAGGCATGGAGAGGACATaGAAGGGTCCACCTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NSAENKLPMHRIRKRLIPGMERT*KGPPSL Trigger: AAGAGAAGGTGGACCCTTGCATGTCCTCTCCATGCC...TGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTTATTTTCTGCACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | CTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACGTGGATTTCACAGTTTaGTCCCACCCAGCCATGAGG | + |
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Preference number: 4 (lower is better) Translates to: LFIFLTLLRKPASHIKRNVDFTV*SHPAMR Trigger: CCTCATGGCTGGGTGGGAGCAAACTGTGAAATCCAC...GTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | AAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCATTCAGGCTAGGAATAGGTGACAAGGGTTGCTaGCACAAGGATCTGCAACAA | + |
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Preference number: 4 (lower is better) Translates to: KLPMHRIRKRLIPFRLGIGDKGC*HKDLQQ Trigger: TTGTTGCAGATCCTTGTGCCAGCAACCCTTGTCACC...TATTCCTAGCCTGAATGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | TCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACTCTTCCTACATAAGGTTTTTCTGCCCTGTTTTTaGCTGCCAAGTTGGCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: STQKAGITHQKKLFLHKVFLPCF*LPSWQC Trigger: ACACTGCCAACTTGGCAGCCAAAAACAGGGCAGAAA...AACCTTATGTAGGAAGAGTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | ATTATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACCCGCAGAGTTGTTaGAACTGGCATTCCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: IMHHTLFIFLTLLRKPASHPQSC*NWHSHR Trigger: CCTGTGGGAATGCCAGTTCCAACAACTCTGCGGGTG...TGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | TATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACAGGCTGGACACACATGTaGCTCCATTTCTGCATGGGT | + |
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Preference number: 4 (lower is better) Translates to: YASYSIYFPNSTQKAGITGWTHM*LHFCMG Trigger: ACCCATGCAGAAATGGAGCCACATGTGTGTCCAGCC...TGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | AAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCATTCAGGCTAGGAATAATGTGGCTCCATTTCTaGATGGGTCTAGGACACAGT | + |
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Preference number: 4 (lower is better) Translates to: KLPMHRIRKRLIPFRLGIMWLHF*MGLGHS Trigger: ACTGTGTCCTAGACCCATGCAGAAATGGAGCCACAT...TATTCCTAGCCTGAATGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | TATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACAACAAAACCAATGAAGTaGTTGGGTCCCAAGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: YASYSIYFPNSTQKAGITTKPMK*LGPKAS Trigger: GCTGGCCTTGGGACCCAACCACTTCATTGGTTTTGT...TGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CCA 90 bp | CTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACCCTCTGATGGCTTCGTaGCACATTTTCCTTTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LFIFLTLLRKPASHIKRNPLMAS*HIFLFP Trigger: CGGGAAAAGGAAAATGTGCCACGAAGCCATCAGAGG...GTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR TCA 90 bp | AACAGTGCAGAAAATAAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCAGAAGACAAAGGCAAGTaGAATTGCTCCCATCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: NSAENKLPMHRIRKRLIPEDKGK*NCSHPA Trigger: AGCAGGATGGGAGCAATTTCACTTGCCTTTGTCTTC...TGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTTATTTTCTGCACTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | CTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACCTTCATAGCCGTCGTTaGAAATGCAGAGGTAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LFIFLTLLRKPASHIKRNLHSRR*KCRGSC Trigger: ACAGCTACCTCTGCATTTGCAACGACGGCTATGAAG...GTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | AACAGTGCAGAAAATAAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCAATTCTTCACAGAAGGTaGCAATGTACTGGTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: NSAENKLPMHRIRKRLIPILHRR*QCTGPG Trigger: GCCAGGACCAGTACATTGGCACCTTCTGTGAAGAAT...TGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTTATTTTCTGCACTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR GCA 90 bp | AACAGTGCAGAAAATAAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCAACTCACTGTCAATGCTaGGGCAGTTGTAGAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSAENKLPMHRIRKRLIPTHCQC*GSCRTP Trigger: AGGAGTTCTACAACTGCCGCAGCATTGACAGTGAGT...TGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTTATTTTCTGCACTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS-3UTR CCA 90 bp | TATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACAGAGTTGTTGGAACTaGCATTCCCACAGGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: YASYSIYFPNSTQKAGITQSCWN*HSHRQH Trigger: ATGTTGCCTGTGGGAATGCCAGTTCCAACAACTCTG...TGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS-3UTR CCA 90 bp | TCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACTCTTCCTACATAAGGTTCTCTCCAGTATAACCTaGAAGACAAAGGCAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: STQKAGITHQKKLFLHKVLSSIT*KTKASE Trigger: TTCACTTGCCTTTGTCTTCCAGGTTATACTGGAGAG...AACCTTATGTAGGAAGAGTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS-3UTR CCA 90 bp | ATTATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCAGACTTCCACTGCAGGTaGATTTCACAGTTTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IMHHTLFIFLTLLRKPASDFHCR*ISQFAP Trigger: GGGAGCAAACTGTGAAATCCACCTGCAGTGGAAGTC...TGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS-3UTR GCA 90 bp | CTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACGCTGGCACAAGGATCTaGAACAAACTGACAATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFIFLTLLRKPASHIKRNAGTRI*NKLTIG Trigger: ACCTATTGTCAGTTTGTTGCAGATCCTTGTGCCAGC...GTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS-3UTR CCA 90 bp | AAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCATTCAGGCTAGGAATATGGAATACTGGGAAGTaGTTGTTCACAGTTAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: KLPMHRIRKRLIPFRLGIWNTGK*LFTVKT Trigger: GGTCTTAACTGTGAACAACCACTTCCCAGTATTCCA...TATTCCTAGCCTGAATGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS-3UTR CCA 90 bp | CTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACCAGAGGTTGGAATACTaGGAAGTGGTTGTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFIFLTLLRKPASHIKRNQRLEY*EVVVHS Trigger: ACTGTGAACAACCACTTCCCAGTATTCCAACCTCTG...GTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS-3UTR CCA 90 bp | TATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACACAGTAATCAATCTTaGACTGGCAAAGCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YASYSIYFPNSTQKAGITHSNQS*TGKALQ Trigger: CTGGAGAGCTTTGCCAGTCCAAGATTGATTACTGTG...TGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS-3UTR CCA 90 bp | ACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACTCTTCCTACATAAGGTCCAGCATGATGACATaGGTTACTATCACATTCATT | + |
|
Preference number: 4 (lower is better) Translates to: TLLRKPASHIKRNSSYIRSSMMT*VTITFI Trigger: AATGAATGTGATAGTAACCCATGTCATCATGCTGGA...CCTTATGTAGGAAGAGTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS-3UTR TCA 90 bp | ATTATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCAGGGACCACCTCTACTTaGTCCCATTTCATTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: IMHHTLFIFLTLLRKPASGTTST*SHFIST Trigger: TGTAGAAATGAAATGGGATCAAGTAGAGGTGGTCCC...TGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS-3UTR GCA 90 bp | AACAGTGCAGAAAATAAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCAATTTCTACAACTTTCTaGCCTGTTTTTGGCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NSAENKLPMHRIRKRLIPISTTF*PVFGCQ Trigger: TTGGCAGCCAAAAACAGGGCAGAAAGTTGTAGAAAT...TGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTTATTTTCTGCACTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS-3UTR GCA 90 bp | CTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACAAATTGCTCCCATCCTaGTTCTCATTTGCATCAATA | + |
|
Preference number: 4 (lower is better) Translates to: LFIFLTLLRKPASHIKRNKLLPS*FSFASI Trigger: TATTGATGCAAATGAGAAGCAGGATGGGAGCAATTT...GTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS CCA 90 bp | TCGGTCACCGAACGCGGAGTGCACACGCCCCCGTTCCGACAGGGCTaGGAGGCGCACGGTCCCGGAGCAGGCAGGGGCGCGGCGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: SVTERGVHTPPFRQG*EAHGPGAGRGAADT Trigger: GGTGTCCGCCGCGCCCCTGCCTGCTCCGGGACCGTGCGCCTCCCAGCCCTGTCGGAACGGGGGCGTGTGCACTCCGCGTTCGGTGACCGA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS TCA 90 bp | GAGCGGGGCAGGATTATGTCAGGCTCCTGGGTGGCGGGGACAGGCTaGAGCTGTCTGGGTGCCGTGGACTCTGTCCAGCCAGAGGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ERGRIMSGSWVAGTG*SCLGAVDSVQPEVG Trigger: TCCAACCTCTGGCTGGACAGAGTCCACGGCACCCAGACAGCTTCAGCCTGTCCCCGCCACCCAGGAGCCTGACATAATCCTGCCCCGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS CCA 90 bp | TCACGGTTGCCTGAGAGCGGGGCAGGATTATGTCAGGCTCCTGGGTaGCGGGGACAGGCTGAAGCTGTCTGGGTGCCGTGGACTCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRLPESGAGLCQAPG*RGQAEAVWVPWTLS Trigger: GGACAGAGTCCACGGCACCCAGACAGCTTCAGCCTGTCCCCGCCACCCAGGAGCCTGACATAATCCTGCCCCGCTCTCAGGCAACCGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS CCA 90 bp | GGCGCAGAAGTCCACCAGCTGGGCACACGTAGGCCCTGTGAAGCCTaGGCTGCAGCTGCAGGTGAAATGCACGCCATCCACGTAGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GAEVHQLGTRRPCEA*AAAAGEMHAIHVAS Trigger: ACTTGCTACGTGGATGGCGTGCATTTCACCTGCAGCTGCAGCCCAGGCTTCACAGGGCCTACGTGTGCCCAGCTGGTGGACTTCTGCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS CCA 90 bp | GGATTATGTCAGGCTCCTGGGTGGCGGGGACAGGCTGAAGCTGTCTaGGTGCCGTGGACTCTGTCCAGCCAGAGGTTGGAATACTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GLCQAPGWRGQAEAV*VPWTLSSQRLEYWE Trigger: TTCCCAGTATTCCAACCTCTGGCTGGACAGAGTCCACGGCACCCAGACAGCTTCAGCCTGTCCCCGCCACCCAGGAGCCTGACATAATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS GCA 90 bp | AACTTTCTGCCCTGTTTTTGGCTGCCAAGTTGGCAGTGTCACGGTTaGCTGAGAGCGGGGCAGGATTATGTCAGGCTCCTGGGTGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: NFLPCFWLPSWQCHG*LRAGQDYVRLLGGG Trigger: CCCGCCACCCAGGAGCCTGACATAATCCTGCCCCGCTCTCAGGCAACCGTGACACTGCCAACTTGGCAGCCAAAAACAGGGCAGAAAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS CCA 90 bp | GAACTCACTGTCAATGCTGCGGCAGTTGTAGAACTCCTCATAGGCTaGCCGGGAGGAGCCCTGGTACTCGATGCGGCTGATGCGGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ELTVNAAAVVELLIG*PGGALVLDAADAAD Trigger: ATCTGCCGCATCAGCCGCATCGAGTACCAGGGCTCCTCCCGGCCAGCCTATGAGGAGTTCTACAACTGCCGCAGCATTGACAGTGAGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS GCA 90 bp | AGCCGTCGTTGCAAATGCAGAGGTAGCTGTCGCTGCTGCTGCTGCTaGTGCTGCTGCAGTTACCATGGTGACAAGGGTTGCTGGCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRRCKCRGSCRCCCC*CCCSYHGDKGCWHK Trigger: CTTGTGCCAGCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCTACCTCTGCATTTGCAACGACGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS GCA 90 bp | CGTTGCAAATGCAGAGGTAGCTGTCGCTGCTGCTGCTGCTGCTGCTaGTGCAGTTACCATGGTGACAAGGGTTGCTGGCACAAGGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RCKCRGSCRCCCCCC*CSYHGDKGCWHKDL Trigger: CAGATCCTTGTGCCAGCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCTACCTCTGCATTTGCAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS GCA 90 bp | CGTCGTTGCAAATGCAGAGGTAGCTGTCGCTGCTGCTGCTGCTGCTaGTGCTGCAGTTACCATGGTGACAAGGGTTGCTGGCACAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RRCKCRGSCRCCCCC*CCSYHGDKGCWHKD Trigger: ATCCTTGTGCCAGCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCTACCTCTGCATTTGCAACGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS GCA 90 bp | GACCTTCATAGCCGTCGTTGCAAATGCAGAGGTAGCTGTCGCTGCTaGTGCTGCTGCTGCTGCTGCAGTTACCATGGTGACAAGGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DLHSRRCKCRGSCRC*CCCCCCSYHGDKGC Trigger: GCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCTACCTCTGCATTTGCAACGACGGCTATGAAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS CCA 90 bp | TCCACCTTCTCTTCACAAGCGGAGCCGAAGTACCCTTCCAGACACTaGCAGGTGAACCCGCTGAGGCTGGACACACATGTGGCTCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: STFSSQAEPKYPSRH*QVNPLRLDTHVAPF Trigger: AAATGGAGCCACATGTGTGTCCAGCCTCAGCGGGTTCACCTGCCAGTGTCTGGAAGGGTACTTCGGCTCCGCTTGTGAAGAGAAGGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS CCA 90 bp | CATCGGGACTGTAATCCTCGTAGGCAATGGGAGTCACGTCGTACATaGCAGGCCGAGACTTCTTCCCAAACCTGGCATGCCGGATGGATG | + |
|
Preference number: 5 (lower is better) Translates to: HRDCNPRRQWESRRT*QAETSSQTWHAGWM Trigger: CATCCATCCGGCATGCCAGGTTTGGGAAGAAGTCTCGGCCTGCCATGTACGACGTGACTCCCATTGCCTACGAGGATTACAGTCCCGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS GCA 90 bp | GCTGCTGCAGTTACCATGGTGACAAGGGTTGCTGGCACAAGGATCTaGAACAAACTGACAATAGGTGCCAGAGACCCCAGCGGGACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AAAVTMVTRVAGTRI*NKLTIGARDPSGTG Trigger: ACCTGTCCCGCTGGGGTCTCTGGCACCTATTGTCAGTTTGTTGCAGATCCTTGTGCCAGCAACCCTTGTCACCATGGTAACTGCAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS GCA 90 bp | TGCAAATGCAGAGGTAGCTGTCGCTGCTGCTGCTGCTGCTGCTGCTaGAGTTACCATGGTGACAAGGGTTGCTGGCACAAGGATCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CKCRGSCRCCCCCCC*SYHGDKGCWHKDLQ Trigger: TTGCAGATCCTTGTGCCAGCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCTACCTCTGCATTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS GCA 90 bp | CGCCATCCACGTAGCAAGTGCCATTGTTCTGGCATGGAGAGGACATaGAAGGGTCCACCTTCTCTTCACAAGCGGAGCCGAAGTACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RHPRSKCHCSGMERT*KGPPSLHKRSRSTL Trigger: AAGGGTACTTCGGCTCCGCTTGTGAAGAGAAGGTGGACCCTTGCATGTCCTCTCCATGCCAGAACAATGGCACTTGCTACGTGGATGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS GCA 90 bp | CATGGCAGGCCGAGACTTCTTCCCAAACCTGGCATGCCGGATGGATaGGATGGCATTGCTGAACTCACTGTCAATGCTGCGGCAGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: HGRPRLLPKPGMPDG*DGIAELTVNAAAVV Trigger: TACAACTGCCGCAGCATTGACAGTGAGTTCAGCAATGCCATCGCATCCATCCGGCATGCCAGGTTTGGGAAGAAGTCTCGGCCTGCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS GCA 90 bp | GTCACGTCGTACATGGCAGGCCGAGACTTCTTCCCAAACCTGGCATaGCGGATGGATGCGATGGCATTGCTGAACTCACTGTCAATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VTSYMAGRDFFPNLA*RMDAMALLNSLSML Trigger: CAGCATTGACAGTGAGTTCAGCAATGCCATCGCATCCATCCGGCATGCCAGGTTTGGGAAGAAGTCTCGGCCTGCCATGTACGACGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS CCA 90 bp | GCACTTCAAAAGACACTAGGCGGCCACCCGCAGAGTTGTTGGAACTaGCATTCCCACAGGCAACATCAGGGACCACCTCTACTTGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: ALQKTLGGHPQSCWN*HSHRQHQGPPLLDP Trigger: GGGATCAAGTAGAGGTGGTCCCTGATGTTGCCTGTGGGAATGCCAGTTCCAACAACTCTGCGGGTGGCCGCCTAGTGTCTTTTGAAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 ENSMUST00000191546.3 |
||
| CDS CCA 90 bp | GGTGAAATGCACGCCATCCACGTAGCAAGTGCCATTGTTCTGGCATaGAGAGGACATGCAAGGGTCCACCTTCTCTTCACAAGCGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GEMHAIHVASAIVLA*RGHARVHLLFTSGA Trigger: GGCTCCGCTTGTGAAGAGAAGGTGGACCCTTGCATGTCCTCTCCATGCCAGAACAATGGCACTTGCTACGTGGATGGCGTGCATTTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS CCA 90 bp | TGCTGCTGCTGCTGCTGCTGCAGTTACCATGGTGACAAGGGTTGCTaGCACAAGGATCTGCAACAAACTGACAATAGGTGCCAGAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCCCSYHGDKGC*HKDLQQTDNRCQRP Trigger: GGGTCTCTGGCACCTATTGTCAGTTTGTTGCAGATCCTTGTGCCAGCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS GCA 90 bp | TGCTGCTGCTGCTGCTGCTGCTGCAGTTACCATGGTGACAAGGGTTaGTGGCACAAGGATCTGCAACAAACTGACAATAGGTGCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CCCCCCCCSYHGDKG*WHKDLQQTDNRCQR Trigger: TCTCTGGCACCTATTGTCAGTTTGTTGCAGATCCTTGTGCCAGCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS CCA 90 bp | AGGCTGAAGCTGTCTGGGTGCCGTGGACTCTGTCCAGCCAGAGGTTaGAATACTGGGAAGTGGTTGTTCACAGTTAAGACCTTCATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLKLSGCRGLCPARG*NTGKWLFTVKTFIA Trigger: GGCTATGAAGGTCTTAACTGTGAACAACCACTTCCCAGTATTCCAACCTCTGGCTGGACAGAGTCCACGGCACCCAGACAGCTTCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS CCA 90 bp | AGTTTGCTCCCACCCAGCCATGAGGACAGTGGCAGGTGTAACCATTaGGCTGGTCCAAGCAGGTTCCAGCATGATGACATGGGTTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: SLLPPSHEDSGRCNH*AGPSRFQHDDMGYY Trigger: ATAGTAACCCATGTCATCATGCTGGAACCTGCTTGGACCAGCCCAATGGTTACACCTGCCACTGTCCTCATGGCTGGGTGGGAGCAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS-3UTR CAA 90 bp | ACACTACAGAAGGGACTGGCACCTCTTACATGTCACTACCTCTTAGCAAGAAACGAGTGCCGAGGCATGTaGGTGAGGCTCTCGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TLQKGLAPLTCHYLLARNECRGM*VRLSAM Trigger: CATGGCCGAGAGCCTCACCAACATGCCTCGGCACTC...GTTTCTTGCTAAGAGGTAGTGACATGTAAGAGGTGCCAGTCCCTTCTGTAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS TCA 90 bp | GCCTGGAGGGGTGTCACACTTCGACCATCTATGAGGGAACACTGTTaGAAGCCTGTGGCTGTGACCTTCCACAGCAAGATCAGCAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AWRGVTLRPSMREHC*KPVAVTFHSKISKE Trigger: TTCTTTGCTGATCTTGCTGTGGAAGGTCACAGCCACAGGCTTTCAACAGTGTTCCCTCATAGATGGTCGAAGTGTGACACCCCTCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS TCA 90 bp | ACTTCTTCCCAAACCTGGCATGCCGGATGGATGCGATGGCATTGCTaGACTCACTGTCAATGCTGCGGCAGTTGTAGAACTCCTCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSSQTWHAGWMRWHC*THCQCCGSCRTPHR Trigger: CCTATGAGGAGTTCTACAACTGCCGCAGCATTGACAGTGAGTTCAGCAATGCCATCGCATCCATCCGGCATGCCAGGTTTGGGAAGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS CCA 90 bp | GGGTGCCGTGGACTCTGTCCAGCCAGAGGTTGGAATACTGGGAAGTaGTTGTTCACAGTTAAGACCTTCATAGCCGTCGTTGCAAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: GCRGLCPARGWNTGK*LFTVKTFIAVVANA Trigger: TGCATTTGCAACGACGGCTATGAAGGTCTTAACTGTGAACAACCACTTCCCAGTATTCCAACCTCTGGCTGGACAGAGTCCACGGCACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS CCA 90 bp | TGGCAGGCATCAAATTCTTCACAGAAGGTGCCAATGTACTGGTCCTaGCAGGTGCAGGAAAAGGTTGCCTCTGATGGCTTCGTGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: WQASNSSQKVPMYWS*QVQEKVASDGFVAH Trigger: ATGTGCCACGAAGCCATCAGAGGCAACCTTTTCCTGCACCTGCCAGGACCAGTACATTGGCACCTTCTGTGAAGAATTTGATGCCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS CCA 90 bp | TTCCTCTGGCAGGCATCAAATTCTTCACAGAAGGTGCCAATGTACTaGTCCTGGCAGGTGCAGGAAAAGGTTGCCTCTGATGGCTTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLWQASNSSQKVPMY*SWQVQEKVASDGFV Trigger: CACGAAGCCATCAGAGGCAACCTTTTCCTGCACCTGCCAGGACCAGTACATTGGCACCTTCTGTGAAGAATTTGATGCCTGCCAGAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS CCA 90 bp | CCATTTCATTTCTACAACTTTCTGCCCTGTTTTTGGCTGCCAAGTTaGCAGTGTCACGGTTGCCTGAGAGCGGGGCAGGATTATGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PFHFYNFLPCFWLPS*QCHGCLRAGQDYVR Trigger: CCTGACATAATCCTGCCCCGCTCTCAGGCAACCGTGACACTGCCAACTTGGCAGCCAAAAACAGGGCAGAAAGTTGTAGAAATGAAATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS CCA 90 bp | CTCTACTTGATCCCATTTCATTTCTACAACTTTCTGCCCTGTTTTTaGCTGCCAAGTTGGCAGTGTCACGGTTGCCTGAGAGCGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LYLIPFHFYNFLPCF*LPSWQCHGCLRAGQ Trigger: CTGCCCCGCTCTCAGGCAACCGTGACACTGCCAACTTGGCAGCCAAAAACAGGGCAGAAAGTTGTAGAAATGAAATGGGATCAAGTAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS-3UTR CAA 90 bp | ACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACTCTTCCTACATAAGGTTGGCAGTGTCACGGTaGCCTGAGAGCGGGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TLLRKPASHIKRNSSYIRLAVSR*PESGAG Trigger: TCCTGCCCCGCTCTCAGGCAACCGTGACACTGCCAA...CCTTATGTAGGAAGAGTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS-3UTR CAA 90 bp | AACAGTGCAGAAAATAAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCAAGCCAAGCAGCCGCTTaGGGGCCCAGCACCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NSAENKLPMHRIRKRLIPSQAAA*GPSTQQ Trigger: CTGCTGGGTGCTGGGCCCCAAAGCGGCTGCTTGGCT...TGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTTATTTTCTGCACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS GCA 90 bp | CATCAAATTCTTCACAGAAGGTGCCAATGTACTGGTCCTGGCAGGTaGAGGAAAAGGTTGCCTCTGATGGCTTCGTGGCACATTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HQILHRRCQCTGPGR*RKRLPLMASWHIFL Trigger: AAGGAAAATGTGCCACGAAGCCATCAGAGGCAACCTTTTCCTGCACCTGCCAGGACCAGTACATTGGCACCTTCTGTGAAGAATTTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CCA 90 bp | TCATTTGCATCAATACAGCTCGCCTCATTCTGGCAGGGTTTCCTCTaGCAGGCATCAAATTCTTCACAGAAGGTGCCAATGTACTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFASIQLASFWQGFL*QASNSSQKVPMYWS Trigger: GGACCAGTACATTGGCACCTTCTGTGAAGAATTTGATGCCTGCCAGAGGAAACCCTGCCAGAATGAGGCGAGCTGTATTGATGCAAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CAA 90 bp | TATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACGGCCACCCGCAGAGTaGTTGGAACTGGCATTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YASYSIYFPNSTQKAGITRPPAE*LELAFP Trigger: TGGGAATGCCAGTTCCAACAACTCTGCGGGTGGCCG...TGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CAA 90 bp | TCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACTCTTCCTACATAAGGTTTTTTTGGCTGCCAAGTaGGCAGTGTCACGGTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: STQKAGITHQKKLFLHKVFLAAK*AVSRLP Trigger: AGGCAACCGTGACACTGCCAACTTGGCAGCCAAAAA...AACCTTATGTAGGAAGAGTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGA 46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CAA 90 bp | ACACTACAGAAGGGACTGGCACCTCTTACATGTCACTACCTCTTAGCAAGAAACAGGGACCACCTCTACTaGATCCCATTTCATTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: TLQKGLAPLTCHYLLARNRDHLY*IPFHFY Trigger: GTAGAAATGAAATGGGATCAAGTAGAGGTGGTCCCT...GTTTCTTGCTAAGAGGTAGTGACATGTAAGAGGTGCCAGTCCCTTCTGTAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CAA 90 bp | CTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCAAAAGAAACCCACCCGCAGAGTTGTaGGAACTGGCATTCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LFIFLTLLRKPASHIKRNPPAEL*ELAFPQ Trigger: CTGTGGGAATGCCAGTTCCAACAACTCTGCGGGTGG...GTTTCTTTTGATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CAA 90 bp | CATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCAGGTGCAGGAAAAGGTaGCCTCTGATGGCTTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HHTLFIFLTLLRKPASHIRCRKR*PLMASW Trigger: CCACGAAGCCATCAGAGGCAACCTTTTCCTGCACCT...GATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CAA 90 bp | AACAGTGCAGAAAATAAGTTACCCATGCACAGAATAAGAAAGAGGCTAATTCCACTGTCCAGCCAGAGGTaGGAATACTGGGAAGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: NSAENKLPMHRIRKRLIPLSSQR*EYWEVV Trigger: AACCACTTCCCAGTATTCCAACCTCTGGCTGGACAG...TGGAATTAGCCTCTTTCTTATTCTGTGCATGGGTAACTTATTTTCTGCACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CAA 90 bp | CATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCTATGAGGGAACACTGTaGAAAGCCTGTGGCTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HHTLFIFLTLLRKPASHIYEGTL*KACGCD Trigger: GTCACAGCCACAGGCTTTCAACAGTGTTCCCTCATA...GATGTGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CAA 90 bp | TATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCACACATCCTGCTTCTCATTaGCATCAATACAGCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: YASYSIYFPNSTQKAGITHPASH*HQYSSP Trigger: AGGCGAGCTGTATTGATGCAAATGAGAAGCAGGATG...TGTGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS-3UTR CAA 90 bp | ATTATGCATCATACTCTATTTATTTTCCTAACTCTACTCAGAAAGCCGGCATCAAATACTGGGAAGTGGTaGTTCACAGTTAAGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IMHHTLFIFLTLLRKPASNTGKW*FTVKTF Trigger: GAAGGTCTTAACTGTGAACAACCACTTCCCAGTATT...TGATGCCGGCTTTCTGAGTAGAGTTAGGAAAATAAATAGAGTATGATGCATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CCA 72 bp | GGCGCGGCGGACACCGGGCTAGCCAAGCAGCCGCTTTaGGGCCCAGCACCCAGCAGCAGGGGCAGCAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GAADTGLAKQPL*GPAPSSRGSRA Trigger: GGCCCTGCTGCCCCTGCTGCTGGGTGCTGGGCCCCAAAGCGGCTGCTTGGCTAGCCCGGTGTCCGCCGCGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS CAA 72 bp | GGGCGCGGCGGACACCGGGCTAGCCAAGCAGCCGCTTaGGGGCCCAGCACCCAGCAGCAGGGGCAGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRGGHRASQAAA*GPSTQQQGQQG Trigger: GCCCTGCTGCCCCTGCTGCTGGGTGCTGGGCCCCAAAGCGGCTGCTTGGCTAGCCCGGTGTCCGCCGCGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CAA 72 bp | GCTGTAGCGGGGCTCAGCATCGGCCGCAGGGTGCTCTaGGTCGGTCACCGAACGCGGAGTGCACACGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: AVAGLSIGRRVL*VGHRTRSAHAP Trigger: GGGGGCGTGTGCACTCCGCGTTCGGTGACCGACCAAGAGCACCCTGCGGCCGATGCTGAGCCCCGCTACAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CCA 72 bp | CCTGAGAGCGGGGCAGGATTATGTCAGGCTCCTGGGTaGCGGGGACAGGCTGAAGCTGTCTGGGTGCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PESGAGLCQAPG*RGQAEAVWVPW Trigger: CCACGGCACCCAGACAGCTTCAGCCTGTCCCCGCCACCCAGGAGCCTGACATAATCCTGCCCCGCTCTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS CCA 72 bp | CAGGCTCCTGGGTGGCGGGGACAGGCTGAAGCTGTCTaGGTGCCGTGGACTCTGTCCAGCCAGAGGTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QAPGWRGQAEAV*VPWTLSSQRLE Trigger: TTCCAACCTCTGGCTGGACAGAGTCCACGGCACCCAGACAGCTTCAGCCTGTCCCCGCCACCCAGGAGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS TCA 72 bp | AGGATTATGTCAGGCTCCTGGGTGGCGGGGACAGGCTaGAGCTGTCTGGGTGCCGTGGACTCTGTCCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RIMSGSWVAGTG*SCLGAVDSVQP Trigger: TGGCTGGACAGAGTCCACGGCACCCAGACAGCTTCAGCCTGTCCCCGCCACCCAGGAGCCTGACATAATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS GCA 72 bp | CTCCTGGGTGGCGGGGACAGGCTGAAGCTGTCTGGGTaGCGTGGACTCTGTCCAGCCAGAGGTTGGAATACT | + |
|
Preference number: 6 (lower is better) Translates to: LLGGGDRLKLSG*RGLCPARGWNT Trigger: AGTATTCCAACCTCTGGCTGGACAGAGTCCACGGCACCCAGACAGCTTCAGCCTGTCCCCGCCACCCAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS CCA 72 bp | GGCCATGGTAACCTGGATCGCAGAGGCACTTGTAGCTaGTGCCCACGCTACGGCACATGCCATGAGCACACG | + |
|
Preference number: 6 (lower is better) Translates to: GHGNLDRRGTCS*CPRYGTCHEHT Trigger: CGTGTGCTCATGGCATGTGCCGTAGCGTGGGCACCAGCTACAAGTGCCTCTGCGATCCAGGTTACCATGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS GCA 72 bp | TGCAGAGGTAGCTGTCGCTGCTGCTGCTGCTGCTGCTaGTGCAGTTACCATGGTGACAAGGGTTGCTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: CRGSCRCCCCCC*CSYHGDKGCWH Trigger: GTGCCAGCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCTACCTCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS GCA 72 bp | CATGGTAACCTGGATCGCAGAGGCACTTGTAGCTGGTaGCCACGCTACGGCACATGCCATGAGCACACGGAC | + |
|
Preference number: 6 (lower is better) Translates to: HGNLDRRGTCSW*PRYGTCHEHTD Trigger: GTCCGTGTGCTCATGGCATGTGCCGTAGCGTGGGCACCAGCTACAAGTGCCTCTGCGATCCAGGTTACCATG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CCA 72 bp | GTCAATGCTGCGGCAGTTGTAGAACTCCTCATAGGCTaGCCGGGAGGAGCCCTGGTACTCGATGCGGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: VNAAAVVELLIG*PGGALVLDAAD Trigger: ATCAGCCGCATCGAGTACCAGGGCTCCTCCCGGCCAGCCTATGAGGAGTTCTACAACTGCCGCAGCATTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CAA 90 bp | CAACTTTCTGCCCTGTTTTTGGCTGCCAAGTTGGCAGTGTCACGGTaGCCTGAGAGCGGGGCAGGATTATGTCAGGCTCCTGGGTGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: QLSALFLAAKLAVSR*PESGAGLCQAPGWR Trigger: CCGCCACCCAGGAGCCTGACATAATCCTGCCCCGCTCTCAGGCAACCGTGACACTGCCAACTTGGCAGCCAAAAACAGGGCAGAAAGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS TCA 72 bp | GTTTTTGGCTGCCAAGTTGGCAGTGTCACGGTTGCCTaGGAGCGGGGCAGGATTATGTCAGGCTCCTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VFGCQVGSVTVA*ERGRIMSGSWV Trigger: CACCCAGGAGCCTGACATAATCCTGCCCCGCTCTCAGGCAACCGTGACACTGCCAACTTGGCAGCCAAAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS GCA 72 bp | AGAGGTAGCTGTCGCTGCTGCTGCTGCTGCTGCTGCTaGAGTTACCATGGTGACAAGGGTTGCTGGCACAAG | + |
|
Preference number: 6 (lower is better) Translates to: RGSCRCCCCCCC*SYHGDKGCWHK Trigger: CTTGTGCCAGCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCTACCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS GCA 72 bp | AGCCGTCGTTGCAAATGCAGAGGTAGCTGTCGCTGCTaGTGCTGCTGCTGCTGCTGCAGTTACCATGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SRRCKCRGSCRC*CCCCCCSYHGD Trigger: GTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCTACCTCTGCATTTGCAACGACGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS CCA 72 bp | AGCATCTCCTCTAGCAGGACAAGGCCCCCTGGAGCCTaGAGGGGTGTCACACTTCGACCATCTATGAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SISSSRTRPPGA*RGVTLRPSMRE Trigger: TTCCCTCATAGATGGTCGAAGTGTGACACCCCTCCAGGCTCCAGGGGGCCTTGTCCTGCTAGAGGAGATGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS GCA 72 bp | AAATGCAGAGGTAGCTGTCGCTGCTGCTGCTGCTGCTaGTGCTGCAGTTACCATGGTGACAAGGGTTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KCRGSCRCCCCC*CCSYHGDKGCW Trigger: CCAGCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCTACCTCTGCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS GCA 72 bp | TGCAAATGCAGAGGTAGCTGTCGCTGCTGCTGCTGCTaGTGCTGCTGCAGTTACCATGGTGACAAGGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CKCRGSCRCCCC*CCCSYHGDKGC Trigger: GCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCTACCTCTGCATTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS GCA 72 bp | CGTTGCAAATGCAGAGGTAGCTGTCGCTGCTGCTGCTaGTGCTGCTGCTGCAGTTACCATGGTGACAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RCKCRGSCRCCC*CCCCSYHGDKG Trigger: ACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCTACCTCTGCATTTGCAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS GCA 72 bp | CGTCGTTGCAAATGCAGAGGTAGCTGTCGCTGCTGCTaGTGCTGCTGCTGCTGCAGTTACCATGGTGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: RRCKCRGSCRCC*CCCCCSYHGDK Trigger: CTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCAGCGACAGCTACCTCTGCATTTGCAACGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS GCA 72 bp | GATGTCAATGTCACACTCTTCACCTGTGAACCCGGGTaGACAGATGCACGTGCCATTCAGCCCCTCGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DVNVTLFTCEPG*TDARAIQPLAV Trigger: GACAGCGAGGGGCTGAATGGCACGTGCATCTGTGCACCCGGGTTCACAGGTGAAGAGTGTGACATTGACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CCA 72 bp | AAGACACTAGGCGGCCACCCGCAGAGTTGTTGGAACTaGCATTCCCACAGGCAACATCAGGGACCACCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: KTLGGHPQSCWN*HSHRQHQGPPL Trigger: TAGAGGTGGTCCCTGATGTTGCCTGTGGGAATGCCAGTTCCAACAACTCTGCGGGTGGCCGCCTAGTGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 ENSMUST00000191546.3 |
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| CDS CCA 72 bp | CCACCCAGCCATGAGGACAGTGGCAGGTGTAACCATTaGGCTGGTCCAAGCAGGTTCCAGCATGATGACATG | + |
|
Preference number: 6 (lower is better) Translates to: PPSHEDSGRCNH*AGPSRFQHDDM Trigger: CATGTCATCATGCTGGAACCTGCTTGGACCAGCCCAATGGTTACACCTGCCACTGTCCTCATGGCTGGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CAA 72 bp | GGCACTTCAAAAGACACTAGGCGGCCACCCGCAGAGTaGTTGGAACTGGCATTCCCACAGGCAACATCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GTSKDTRRPPAE*LELAFPQATSG Trigger: CCCTGATGTTGCCTGTGGGAATGCCAGTTCCAACAACTCTGCGGGTGGCCGCCTAGTGTCTTTTGAAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 ENSMUST00000191546.3 |
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| CDS CAA 90 bp | GTGTTCTGTGGCACTTCAAAAGACACTAGGCGGCCACCCGCAGAGTaGTTGGAACTGGCATTCCCACAGGCAACATCAGGGACCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VFCGTSKDTRRPPAE*LELAFPQATSGTTS Trigger: AGAGGTGGTCCCTGATGTTGCCTGTGGGAATGCCAGTTCCAACAACTCTGCGGGTGGCCGCCTAGTGTCTTTTGAAGTGCCACAGAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 ENSMUST00000191546.3 |
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| CDS TCA 72 bp | CTGCTGCTGCTGCTGCTGCTGCTGCAGTTACCATGGTaGCAAGGGTTGCTGGCACAAGGATCTGCAACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLLLLQLPW*QGLLAQGSATN Trigger: GTTTGTTGCAGATCCTTGTGCCAGCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS GCA 72 bp | CGTAGCAAGTGCCATTGTTCTGGCATGGAGAGGACATaGAAGGGTCCACCTTCTCTTCACAAGCGGAGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: RSKCHCSGMERT*KGPPSLHKRSR Trigger: TCGGCTCCGCTTGTGAAGAGAAGGTGGACCCTTGCATGTCCTCTCCATGCCAGAACAATGGCACTTGCTACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS GCA 72 bp | CCGAGACTTCTTCCCAAACCTGGCATGCCGGATGGATaGGATGGCATTGCTGAACTCACTGTCAATGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PRLLPKPGMPDG*DGIAELTVNAA Trigger: CGCAGCATTGACAGTGAGTTCAGCAATGCCATCGCATCCATCCGGCATGCCAGGTTTGGGAAGAAGTCTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CAA 72 bp | ACTTCAAAAGACACTAGGCGGCCACCCGCAGAGTTGTaGGAACTGGCATTCCCACAGGCAACATCAGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: TSKDTRRPPAEL*ELAFPQATSGT Trigger: GGTCCCTGATGTTGCCTGTGGGAATGCCAGTTCCAACAACTCTGCGGGTGGCCGCCTAGTGTCTTTTGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 ENSMUST00000191546.3 |
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| CDS CAA 90 bp | TTCTGTGGCACTTCAAAAGACACTAGGCGGCCACCCGCAGAGTTGTaGGAACTGGCATTCCCACAGGCAACATCAGGGACCACCTCTACT | + |
|
Preference number: 6 (lower is better) Translates to: FCGTSKDTRRPPAEL*ELAFPQATSGTTST Trigger: AGTAGAGGTGGTCCCTGATGTTGCCTGTGGGAATGCCAGTTCCAACAACTCTGCGGGTGGCCGCCTAGTGTCTTTTGAAGTGCCACAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 ENSMUST00000191546.3 |
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| CDS TCA 72 bp | CTGCTGCTGCTGCTGCTGCTGCTGCAGTTACCATGGTaGCAAGGGTTGCTGGCACAAGGATCTGCAACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLLLLQLPW*QGLLAQGSATK Trigger: TTTTGTTGCAGATCCTTGTGCCAGCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCAGCAGCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185606.3 |
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| CDS CCA 72 bp | CTGTCTGGGTGCCGTGGACTCTGTCCAGCCAGAGGTTaGAATACTGGGAAGTGGTTGTTCACAGTTAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: LSGCRGLCPARG*NTGKWLFTVKT Trigger: GGTCTTAACTGTGAACAACCACTTCCCAGTATTCCAACCTCTGGCTGGACAGAGTCCACGGCACCCAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS CCA 72 bp | CACGCCATCCACGTAGCAAGTGCCATTGTTCTGGCATaGAGAGGACATGCAAGGGTCCACCTTCTCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: HAIHVASAIVLA*RGHARVHLLFT Trigger: TGTGAAGAGAAGGTGGACCCTTGCATGTCCTCTCCATGCCAGAACAATGGCACTTGCTACGTGGATGGCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS CCA 72 bp | AGGGTTTGTCATCGGGACTGTAATCCTCGTAGGCAATaGGAGTCACGTCGTACATGGCAGGCCGAGACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RVCHRDCNPRRQ*ESRRTWQAETS Trigger: AGAAGTCTCGGCCTGCCATGTACGACGTGACTCCCATTGCCTACGAGGATTACAGTCCCGATGACAAACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CAA 72 bp | TTTCTACAACTTTCTGCCCTGTTTTTGGCTGCCAAGTaGGCAGTGTCACGGTTGCCTGAGAGCGGGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: FLQLSALFLAAK*AVSRLPESGAG Trigger: TCCTGCCCCGCTCTCAGGCAACCGTGACACTGCCAACTTGGCAGCCAAAAACAGGGCAGAAAGTTGTAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
||
| CDS TCA 72 bp | CAAACCTGGCATGCCGGATGGATGCGATGGCATTGCTaGACTCACTGTCAATGCTGCGGCAGTTGTAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: QTWHAGWMRWHC*THCQCCGSCRT Trigger: AGTTCTACAACTGCCGCAGCATTGACAGTGAGTTCAGCAATGCCATCGCATCCATCCGGCATGCCAGGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
||
| CDS GCA 72 bp | GTTACCATGGTGACAAGGGTTGCTGGCACAAGGATCTaGAACAAACTGACAATAGGTGCCAGAGACCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VTMVTRVAGTRI*NKLTIGARDPS Trigger: GCTGGGGTCTCTGGCACCTATTGTCAGTTTGTTGCAGATCCTTGTGCCAGCAACCCTTGTCACCATGGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CAA 90 bp | TGCCGTGGACTCTGTCCAGCCAGAGGTTGGAATACTGGGAAGTGGTaGTTCACAGTTAAGACCTTCATAGCCGTCGTTGCAAATGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: CRGLCPARGWNTGKW*FTVKTFIAVVANAE Trigger: CTCTGCATTTGCAACGACGGCTATGAAGGTCTTAACTGTGAACAACCACTTCCCAGTATTCCAACCTCTGGCTGGACAGAGTCCACGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS CAA 90 bp | CCCATTTCATTTCTACAACTTTCTGCCCTGTTTTTGGCTGCCAAGTaGGCAGTGTCACGGTTGCCTGAGAGCGGGGCAGGATTATGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PISFLQLSALFLAAK*AVSRLPESGAGLCQ Trigger: CTGACATAATCCTGCCCCGCTCTCAGGCAACCGTGACACTGCCAACTTGGCAGCCAAAAACAGGGCAGAAAGTTGTAGAAATGAAATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS CAA 90 bp | CCTCTACTTGATCCCATTTCATTTCTACAACTTTCTGCCCTGTTTTaGGCTGCCAAGTTGGCAGTGTCACGGTTGCCTGAGAGCGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PLLDPISFLQLSALF*AAKLAVSRLPESGA Trigger: TGCCCCGCTCTCAGGCAACCGTGACACTGCCAACTTGGCAGCCAAAAACAGGGCAGAAAGTTGTAGAAATGAAATGGGATCAAGTAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS GCA 72 bp | TGCTGCTGCTGCTGCAGTTACCATGGTGACAAGGGTTaGTGGCACAAGGATCTGCAACAAACTGACAATAGG | + |
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Preference number: 6 (lower is better) Translates to: CCCCCSYHGDKG*WHKDLQQTDNR Trigger: CCTATTGTCAGTTTGTTGCAGATCCTTGTGCCAGCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CCA 72 bp | TGCTGCTGCTGCAGTTACCATGGTGACAAGGGTTGCTaGCACAAGGATCTGCAACAAACTGACAATAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: CCCCSYHGDKGC*HKDLQQTDNRC Trigger: GCACCTATTGTCAGTTTGTTGCAGATCCTTGTGCCAGCAACCCTTGTCACCATGGTAACTGCAGCAGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CAA 90 bp | CCCGAACACTCTAAGTCATTTGAGTGGCTGTCCCCCGGAACACAGTaGCTAGCCTTCACCACAAGTGTTAAACGCAAAGCCACAATGGAT | + |
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Preference number: 6 (lower is better) Translates to: PEHSKSFEWLSPGTQ*LAFTTSVKRKATMD Trigger: ATCCATTGTGGCTTTGCGTTTAACACTTGTGGTGAAGGCTAGCAACTGTGTTCCGGGGGACAGCCACTCAAATGACTTAGAGTGTTCGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CCA 72 bp | TCAAATTCTTCACAGAAGGTGCCAATGTACTGGTCCTaGCAGGTGCAGGAAAAGGTTGCCTCTGATGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SNSSQKVPMYWS*QVQEKVASDGF Trigger: GAAGCCATCAGAGGCAACCTTTTCCTGCACCTGCCAGGACCAGTACATTGGCACCTTCTGTGAAGAATTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CCA 72 bp | CAGGCATCAAATTCTTCACAGAAGGTGCCAATGTACTaGTCCTGGCAGGTGCAGGAAAAGGTTGCCTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: QASNSSQKVPMY*SWQVQEKVASD Trigger: ATCAGAGGCAACCTTTTCCTGCACCTGCCAGGACCAGTACATTGGCACCTTCTGTGAAGAATTTGATGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CAA 90 bp | TCACAGGTACCTCCATTCAGACAGCTGATGTTAGCACAGGGGTCCTaGTACAGTTCGCAGTGTGTTCCTTTATATTCTGCCAGGCACACA | + |
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Preference number: 6 (lower is better) Translates to: SQVPPFRQLMLAQGS*YSSQCVPLYSARHT Trigger: TGTGTGCCTGGCAGAATATAAAGGAACACACTGCGAACTGTACAAGGACCCCTGTGCTAACATCAGCTGTCTGAATGGAGGTACCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CAA 72 bp | CCTCCATTCAGACAGCTGATGTTAGCACAGGGGTCCTaGTACAGTTCGCAGTGTGTTCCTTTATATTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PPFRQLMLAQGS*YSSQCVPLYSA Trigger: GGCAGAATATAAAGGAACACACTGCGAACTGTACAAGGACCCCTGTGCTAACATCAGCTGTCTGAATGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS GCA 72 bp | ACCTTCCACAGCAAGATCAGCAAAGAATTGGCATCCTaGCGAATCTTTACAGAGGTGTTCTGTGGCACTTCA | + |
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Preference number: 6 (lower is better) Translates to: TFHSKISKELAS*RIFTEVFCGTS Trigger: TGAAGTGCCACAGAACACCTCTGTAAAGATTCGGCAGGATGCCAATTCTTTGCTGATCTTGCTGTGGAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049126.13 ENSMUST00000185606.3 |
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| CDS CCA 72 bp | CATTTCTGCATGGGTCTAGGACACAGTAATCAATCTTaGACTGGCAAAGCTCTCCAGTATAACCTGGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: HFCMGLGHSNQS*TGKALQYNLED Trigger: GTCTTCCAGGTTATACTGGAGAGCTTTGCCAGTCCAAGATTGATTACTGTGTCCTAGACCCATGCAGAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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| CDS CCA 72 bp | ATTGGGCTGGTCCAAGCAGGTTCCAGCATGATGACATaGGTTACTATCACATTCATTGATGTCAATGTCACA | + |
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Preference number: 6 (lower is better) Translates to: IGLVQAGSSMMT*VTITFIDVNVT Trigger: TGTGACATTGACATCAATGAATGTGATAGTAACCCATGTCATCATGCTGGAACCTGCTTGGACCAGCCCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049126.13 |
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