Pregenerated sensors for DNASE2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028185Ensembl transcript IDs: ENSMUST00000029836.9, ENSMUST00000200633.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTCCTTACACTTGGTTGTCCTTCCTTGTATCACTGGATCAGTTTTaGCCCTCTCCACCTGGAATCATCACCGCCTTCCCATTAACAATC | + |
|
Preference number: 1 (lower is better) Translates to: FPYTWLSFLVSLDQF*PSPPGIITAFPLTI Trigger: GATTGTTAATGGGAAGGCGGTGATGATTCCAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAACCAAGTGTAAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CCA 90 bp | TTTTATTGGACGCTACGTTGTGCTCACTCAGAAGCCTTGAAATTATaGAGAACAGATCCAAGGCGAGATGTTCCAGTGCCAGTGTTTTCA | + |
|
Preference number: 1 (lower is better) Translates to: FYWTLRCAHSEALKL*RTDPRRDVPVPVFS Trigger: TGAAAACACTGGCACTGGAACATCTCGCCTTGGATCTGTTCTCCATAATTTCAAGGCTTCTGAGTGAGCACAACGTAGCGTCCAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CCA 90 bp | TTGTACTTGATTTTAACACGAAATCAACTCTTCACAGCCTGTCATTaGGCCATTAGACCCTACCATCTTTGGTTTATGTTGAGATCTCAA | + |
|
Preference number: 1 (lower is better) Translates to: LYLILTRNQLFTACH*AIRPYHLWFMLRSQ Trigger: TTGAGATCTCAACATAAACCAAAGATGGTAGGGTCTAATGGCCCAATGACAGGCTGTGAAGAGTTGATTTCGTGTTAAAATCAAGTACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CCA 90 bp | CAACTCTTCACAGCCTGTCATTGGGCCATTAGACCCTACCATCTTTaGTTTATGTTGAGATCTCAAGATAGTTATGATCCTATATTTATT | + |
|
Preference number: 1 (lower is better) Translates to: QLFTACHWAIRPYHL*FMLRSQDSYDPIFI Trigger: AATAAATATAGGATCATAACTATCTTGAGATCTCAACATAAACCAAAGATGGTAGGGTCTAATGGCCCAATGACAGGCTGTGAAGAGTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CAA 90 bp | TCACAGTGCTTTTATTGGACGCTACGTTGTGCTCACTCAGAAGCCTaGAAATTATGGAGAACAGATCCAAGGCGAGATGTTCCAGTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SQCFYWTLRCAHSEA*KLWRTDPRRDVPVP Trigger: TGGCACTGGAACATCTCGCCTTGGATCTGTTCTCCATAATTTCAAGGCTTCTGAGTGAGCACAACGTAGCGTCCAATAAAAGCACTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGGTTGTCCTTCCTTGTATCACTGGATCAGTTTTGACCCTCTCCACCTGGAATGCTTCATGGGGAATATaGCCATATGGCCAAAGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: LVVLPCITGSVLTLSTWNASWGI*PYGQRV Trigger: TACTCTTTGGCCATATGGGCATATTCCCCATGAAGC...ATTCCAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCCTCTATTTGAGCTTTCCTTACACTTGGTTGTCCTTCCTTGTATCACTGGATGCAGCAAGGAGCACCTaGAAAGGTGACAAGACTAAA | + |
|
Preference number: 2 (lower is better) Translates to: SLYLSFPYTWLSFLVSLDAARST*KGDKTK Trigger: TTTAGTCTTGTCACCTTTGCAGGTGCTCCTTGCTGC...ATCCAGTGATACAAGGAAGGACAACCAAGTGTAAGGAAAGCTCAAATAGAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGTTGTCCTTCCTTGTATCACTGGATCAGTTTTGACCCTCTCCACCTGGAATGACTCCTATTTCTCTTaGTTTGAACATAGGAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LVVLPCITGSVLTLSTWNDSYFS*FEHRKV Trigger: TACCTTCCTATGTTCAAATCAAGAGAAATAGGAGTC...ATTCCAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCAATAGAATCCCTCTATTTGAGCTTTCCTTACACTTGGTTGTCCTTCCTTGTCTAGGGTGTTTTCTGTaGGACCAAAACATTGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LNRIPLFELSLHLVVLPCLGCFL*DQNIAL Trigger: GAGAGCAATGTTTTGGTCTCACAGAAAACACCCTAG...ACAAGGAAGGACAACCAAGTGTAAGGAAAGCTCAAATAGAGGGATTCTATTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGAGGAAAATATTGTATTCTGTCCCCTGGTGCTATTACTTACATATCATGATGGCGAGATGTTCCAGTaGCAGTGTTTTCAAGGACAG | + |
|
Preference number: 2 (lower is better) Translates to: LEENIVFCPLVLLLTYHDGEMFQ*QCFQGQ Trigger: CTGTCCTTGAAAACACTGGCACTGGAACATCTCGCC...ATCATGATATGTAAGTAATAGCACCAGGGGACAGAATACAATATTTTCCTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCAATAGAATCCCTCTATTTGAGCTTTCCTTACACTTGGTTGTCCTTCCTTGTGTCAGGGTTGCTTTGTaGGAGATGAAACTTAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: LNRIPLFELSLHLVVLPCVRVAL*EMKLNP Trigger: TGGATTAAGTTTCATCTCTCACAAAGCAACCCTGAC...ACAAGGAAGGACAACCAAGTGTAAGGAAAGCTCAAATAGAGGGATTCTATTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTAAATACCTGCCTCTTGTACTTGATTTTAACACGAAATCAACTCTTCACAGCCTCACTCAGAAGCCTTaGAATTATGGAGAACAGATC | + |
|
Preference number: 2 (lower is better) Translates to: PKYLPLVLDFNTKSTLHSLTQKP*NYGEQI Trigger: GATCTGTTCTCCATAATTTCAAGGCTTCTGAGTGAG...GCTGTGAAGAGTTGATTTCGTGTTAAAATCAAGTACAAGAGGCAGGTATTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCCTAAATACCTGCCTCTTGTACTTGATTTTAACACGAAATCAACTCTTCACAGCAGCAAGGAGCACCTaGAAAGGTGACAAGACTAAA | + |
|
Preference number: 2 (lower is better) Translates to: ILNTCLLYLILTRNQLFTAARST*KGDKTK Trigger: TTTAGTCTTGTCACCTTTGCAGGTGCTCCTTGCTGC...TGTGAAGAGTTGATTTCGTGTTAAAATCAAGTACAAGAGGCAGGTATTTAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCAATAGAATCCCTCTATTTGAGCTTTCCTTACACTTGGTTGTCCTTCCTTGTGACTCCTATTTCTCTTaGTTTGAACATAGGAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LNRIPLFELSLHLVVLPCDSYFS*FEHRKV Trigger: TACCTTCCTATGTTCAAATCAAGAGAAATAGGAGTC...ACAAGGAAGGACAACCAAGTGTAAGGAAAGCTCAAATAGAGGGATTCTATTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCAATAGAATCCCTCTATTTGAGCTTTCCTTACACTTGGTTGTCCTTCCTTGTAGACCCTACCATCTTTaGTTTATGTTGAGATCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: LNRIPLFELSLHLVVLPCRPYHL*FMLRSQ Trigger: TTGAGATCTCAACATAAACCAAAGATGGTAGGGTCT...ACAAGGAAGGACAACCAAGTGTAAGGAAAGCTCAAATAGAGGGATTCTATTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTCTTGTGATTTCTTGACTCATATCATGCTTAGATATGATCTCCCTGTTGTAGAAGCCTTGAAATTATaGAGAACAGATCCAAGGCGA | + |
|
Preference number: 2 (lower is better) Translates to: KSCDFLTHIMLRYDLPVVEALKL*RTDPRR Trigger: TCGCCTTGGATCTGTTCTCCATAATTTCAAGGCTTC...TACAACAGGGAGATCATATCTAAGCATGATATGAGTCAAGAAATCACAAGACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CAA 90 bp | CAGTTAAACCTAGTGTATAATTTTAGCTCAATAGAATCCCTCTATTaGAGCTTTCCTTACACTTGGTTGTCCTTCCTTGTATCACTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: QLNLVYNFSSIESLY*SFPYTWLSFLVSLD Trigger: ATCCAGTGATACAAGGAAGGACAACCAAGTGTAAGGAAAGCTCAAATAGAGGGATTCTATTGAGCTAAAATTATACACTAGGTTTAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR TCA 72 bp | ACTTGGTTGTCCTTCCTTGTATCACTGGATCAGTTTTaGCCCTCTCCACCTGGAATCATCACCGCCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: TWLSFLVSLDQF*PSPPGIITAFP Trigger: TGGGAAGGCGGTGATGATTCCAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAACCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR GCA 72 bp | AATTATGGAGAACAGATCCAAGGCGAGATGTTCCAGTaGCAGTGTTTTCAAGGACAGAGGGTGTGGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: NYGEQIQGEMFQ*QCFQGQRVWPF Trigger: GAAAGGCCACACCCTCTGTCCTTGAAAACACTGGCACTGGAACATCTCGCCTTGGATCTGTTCTCCATAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CCA 72 bp | ACGCTACGTTGTGCTCACTCAGAAGCCTTGAAATTATaGAGAACAGATCCAAGGCGAGATGTTCCAGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TLRCAHSEALKL*RTDPRRDVPVP Trigger: TGGCACTGGAACATCTCGCCTTGGATCTGTTCTCCATAATTTCAAGGCTTCTGAGTGAGCACAACGTAGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTTGGTTGTCCTTCCTTGTATCACTGGATCAGTTTTGACCCTCTCCACCTGGTTGACTCTTAAGCTTTaGAACTCGGAACCCACATCC | + |
|
Preference number: 3 (lower is better) Translates to: HLVVLPCITGSVLTLSTWLTLKL*NSEPTS Trigger: GGATGTGGGTTCCGAGTTCAAAAGCTTAAGAGTCAA...CCAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAACCAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTTGTCCTTCCTTGTATCACTGGATCAGTTTTGACCCTCTCCACCTGGAATCTCACAGTGCTTTTATaGGACGCTACGTTGTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LVVLPCITGSVLTLSTWNLTVLL*DATLCS Trigger: TGAGCACAACGTAGCGTCCAATAAAAGCACTGTGAG...ATTCCAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTTGTCCTTCCTTGTATCACTGGATCAGTTTTGACCCTCTCCACCTGGAATATACTAGGCAAGTGTTaGGAGTTCTCTAAGCCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: LVVLPCITGSVLTLSTWNILGKC*EFSKPP Trigger: CGGAGGCTTAGAGAACTCCAAACACTTGCCTAGTAT...ATTCCAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CCA 72 bp | CCTTGTATCACTGGATCAGTTTTGACCCTCTCCACCTaGAATCATCACCGCCTTCCCATTAACAATCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: PCITGSVLTLST*NHHRLPINNPI Trigger: AATGGGATTGTTAATGGGAAGGCGGTGATGATTCCAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR GCA 72 bp | TGTGGGCTCACAGTGCTTTTATTGGACGCTACGTTGTaGTCACTCAGAAGCCTTGAAATTATGGAGAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: CGLTVLLLDATL*SLRSLEIMENR Trigger: TCTGTTCTCCATAATTTCAAGGCTTCTGAGTGAGCACAACGTAGCGTCCAATAAAAGCACTGTGAGCCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CCA 72 bp | GCTTTCCTTACACTTGGTTGTCCTTCCTTGTATCACTaGATCAGTTTTGACCCTCTCCACCTGGAATCATCA | + |
|
Preference number: 3 (lower is better) Translates to: AFLTLGCPSLYH*ISFDPLHLESS Trigger: TGATGATTCCAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAACCAAGTGTAAGGAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGCACAGCTTCAGAGGCCAAATAGACCTCTATTATACTAGGCAAGTGTTTGGAGCTCACTCAGAAGCCTaGAAATTATGGAGAACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GHSFRGQIDLYYTRQVFGAHSEA*KLWRTD Trigger: ATCTGTTCTCCATAATTTCAAGGCTTCTGAGTGAGC...TCCAAACACTTGCCTAGTATAATAGAGGTCTATTTGGCCTCTGAAGCTGTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGCACCTTTATTTTCTTCAAACAGGACAGTCAGGGTTGCTTTGTGAGAGATAACTGGAGGAAAATATaGTATTCTGTCCCCTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: EGTFIFFKQDSQGCFVRDNWRKI*YSVPWC Trigger: GCACCAGGGGACAGAATACAATATTTTCCTCCAGTT...ATCTCTCACAAAGCAACCCTGACTGTCCTGTTTGAAGAAAATAAAGGTGCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTTGTCCTTCCTTGTATCACTGGATCAGTTTTGACCCTCTCCACCTGGAATACCTGCCTCTTGTACTaGATTTTAACACGAAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: LVVLPCITGSVLTLSTWNTCLLY*ILTRNQ Trigger: TTGATTTCGTGTTAAAATCAAGTACAAGAGGCAGGT...ATTCCAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CCA 72 bp | ACAGCCTGTCATTGGGCCATTAGACCCTACCATCTTTaGTTTATGTTGAGATCTCAAGATAGTTATGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: TACHWAIRPYHL*FMLRSQDSYDP Trigger: AGGATCATAACTATCTTGAGATCTCAACATAAACCAAAGATGGTAGGGTCTAATGGCCCAATGACAGGCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTAAATACCTGCCTCTTGTACTTGATTTTAACACGAAATCAACTCTTCACAGCGCTCACTCAGAAGCCTaGAAATTATGGAGAACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PKYLPLVLDFNTKSTLHSAHSEA*KLWRTD Trigger: ATCTGTTCTCCATAATTTCAAGGCTTCTGAGTGAGC...GCTGTGAAGAGTTGATTTCGTGTTAAAATCAAGTACAAGAGGCAGGTATTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR TCA 72 bp | TTATTTTCTTCAAACAGGACAGTCAGGGTTGCTTTGTaGGAGATGAAACTTAATCCACAAGACAGACCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LFSSNRTVRVAL*EMKLNPQDRPL Trigger: CAGTGGTCTGTCTTGTGGATTAAGTTTCATCTCTCACAAAGCAACCCTGACTGTCCTGTTTGAAGAAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CCA 72 bp | ATTTTAACACGAAATCAACTCTTCACAGCCTGTCATTaGGCCATTAGACCCTACCATCTTTGGTTTATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: ILTRNQLFTACH*AIRPYHLWFML Trigger: CAACATAAACCAAAGATGGTAGGGTCTAATGGCCCAATGACAGGCTGTGAAGAGTTGATTTCGTGTTAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR TCA 72 bp | TCTAATTCCATACATGCAGATGACTCCTATTTCTCTTaGTTTGAACATAGGAAGGTAAATGTGGGCTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: SNSIHADDSYFS*FEHRKVNVGSQ Trigger: CTGTGAGCCCACATTTACCTTCCTATGTTCAAATCAAGAGAAATAGGAGTCATCTGCATGTATGGAATTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR TCA 72 bp | ATTGGGCCATTAGACCCTACCATCTTTGGTTTATGTTaGGATCTCAAGATAGTTATGATCCTATATTTATTC | + |
|
Preference number: 3 (lower is better) Translates to: IGPLDPTIFGLC*DLKIVMILYLF Trigger: GAATAAATATAGGATCATAACTATCTTGAGATCTCAACATAAACCAAAGATGGTAGGGTCTAATGGCCCAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR GCA 90 bp | ACAGATCCAAGGCGAGATGTTCCAGTGCCAGTGTTTTCAAGGACAGAGGGTGTGTCCAGGTACAGGTACTaGAGCCCCGCCTCTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TDPRRDVPVPVFSRTEGVSRYRY*SPASSL Trigger: AAGTGAAGAGGCGGGGCTGCAGTACCTGTACCTGGA...CACACCCTCTGTCCTTGAAAACACTGGCACTGGAACATCTCGCCTTGGATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR GCA 90 bp | ATGGAGAACAGATCCAAGGCGAGATGTTCCAGTGCCAGTGTTTTCAAGGACAGAAGACCCTGGGCTGAGTaGAGTTCAGCGAGGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: MENRSKARCSSASVFKDRRPWAE*SSARYR Trigger: CCGGTACCTCGCTGAACTGCACTCAGCCCAGGGTCT...TCTGTCCTTGAAAACACTGGCACTGGAACATCTCGCCTTGGATCTGTTCTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR TCA 90 bp | CAGATCCAAGGCGAGATGTTCCAGTGCCAGTGTTTTCAAGGACAGAGGGTGTGGAGGCAGGGAACAGTTTaGAGGAAGCTCTTGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QIQGEMFQCQCFQGQRVWRQGTV*RKLLFL Trigger: AAGAAACAAGAGCTTCCTTCAAACTGTTCCCTGCCT...CCACACCCTCTGTCCTTGAAAACACTGGCACTGGAACATCTCGCCTTGGATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGAACAGATCCAAGGCGAGATGTTCCAGTGCCAGTGTTTTCAAGGACAGAGTCCAGGTTTGTCTTGTaGAGTCCAGGTACAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: WRTDPRRDVPVPVFSRTESRFVL*SPGTGT Trigger: AGTACCTGTACCTGGACTCCACAAGACAAACCTGGA...CTCTGTCCTTGAAAACACTGGCACTGGAACATCTCGCCTTGGATCTGTTCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CCA 90 bp | ACACTTGGTTGTCCTTCCTTGTATCACTGGATCAGTTTTGACCCTCTCCACCTGGAACTGGGGGAAACTTaGGAACAGAGTGTATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLGCPSLYHWISFDPLHLELGET*EQSVSA Trigger: GGCTGATACACTCTGTTCCCAAGTTTCCCCCAGTTC...CAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAACCAAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR TCA 90 bp | ACAGATCCAAGGCGAGATGTTCCAGTGCCAGTGTTTTCAAGGACAGAGGGTGTGGATTCTTTGTACAGATaGATCCTCCACCTCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDPRRDVPVPVFSRTEGVDSLYR*ILHLLR Trigger: CCTTAAGAGGTGGAGGATTCATCTGTACAAAGAATC...CACACCCTCTGTCCTTGAAAACACTGGCACTGGAACATCTCGCCTTGGATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGAACAGATCCAAGGCGAGATGTTCCAGTGCCAGTGTTTTCAAGGACAGAGATATTCATTTCTGCATaGGATTTCTGGTGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WRTDPRRDVPVPVFSRTEIFISA*DFWCPQ Trigger: CTGGGGACACCAGAAATCTCATGCAGAAATGAATAT...CTCTGTCCTTGAAAACACTGGCACTGGAACATCTCGCCTTGGATCTGTTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR GCA 90 bp | ACAGATCCAAGGCGAGATGTTCCAGTGCCAGTGTTTTCAAGGACAGAGGGTGTGCACCATATTCATTTCTaGATGAGATTTCTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TDPRRDVPVPVFSRTEGVHHIHF*MRFLVS Trigger: GGACACCAGAAATCTCATGCAGAAATGAATATGGTG...CACACCCTCTGTCCTTGAAAACACTGGCACTGGAACATCTCGCCTTGGATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGAAAATATTGTATTCTGTCCCCTGGTGCTATTACTTACATATCATGATAGACCCTGGGCTGAGTaGAGTTCAGCGAGGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: LEENIVFCPLVLLLTYHDRPWAE*SSARYR Trigger: CCGGTACCTCGCTGAACTGCACTCAGCCCAGGGTCT...ATCATGATATGTAAGTAATAGCACCAGGGGACAGAATACAATATTTTCCTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR GCA 90 bp | CCTAAATACCTGCCTCTTGTACTTGATTTTAACACGAAATCAACTCTTCACAGCTCCAGGTACAGGTACTaGAGCCCCGCCTCTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: PKYLPLVLDFNTKSTLHSSRYRY*SPASSL Trigger: AAGTGAAGAGGCGGGGCTGCAGTACCTGTACCTGGA...GCTGTGAAGAGTTGATTTCGTGTTAAAATCAAGTACAAGAGGCAGGTATTTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGCACCTTTATTTTCTTCAAACAGGACAGTCAGGGTTGCTTTGTGAGAGATTCCAGGTTTGTCTTGTaGAGTCCAGGTACAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: EGTFIFFKQDSQGCFVRDSRFVL*SPGTGT Trigger: AGTACCTGTACCTGGACTCCACAAGACAAACCTGGA...ATCTCTCACAAAGCAACCCTGACTGTCCTGTTTGAAGAAAATAAAGGTGCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CCA 90 bp | TCTATTATACTAGGCAAGTGTTTGGAGTTCTCTAAGCCTCCGTTGACTTGGCAGCTCATAGCCATGAACTaGGGGAAACTTGGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SIILGKCLEFSKPPLTWQLIAMN*GKLGNR Trigger: TCTGTTCCCAAGTTTCCCCCAGTTCATGGCTATGAG...CTGCCAAGTCAACGGAGGCTTAGAGAACTCCAAACACTTGCCTAGTATAATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR TCA 90 bp | CACTTGGTTGTCCTTCCTTGTATCACTGGATCAGTTTTGACCCTCTCCACCTGGTGTAAGACCAAGAGCTaGAAATCTATTTCCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLVVLPCITGSVLTLSTWCKTKS*KSISSN Trigger: GTTTGAGGAAATAGATTTTCAGCTCTTGGTCTTACA...CCAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAACCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTTGTCCTTCCTTGTATCACTGGATCAGTTTTGACCCTCTCCACCTGGAATTTACCCCAATGGACTTaGTGTTGTAGACATGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVVLPCITGSVLTLSTWNLPQWT*CCRHGK Trigger: CTTACCATGTCTACAACATCAAGTCCATTGGGGTAA...ATTCCAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR GCA 90 bp | ACACTTGGTTGTCCTTCCTTGTATCACTGGATCAGTTTTGACCCTCTCCACCTGCACCATATTCATTTCTaGATGAGATTTCTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLGCPSLYHWISFDPLHLHHIHF*MRFLVS Trigger: GGACACCAGAAATCTCATGCAGAAATGAATATGGTG...CAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAACCAAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR GCA 90 bp | ACAGATCCAAGGCGAGATGTTCCAGTGCCAGTGTTTTCAAGGACAGAGGGTGTGTCTTGTTTCTTTTTCTaGCAGGTTTGTGCTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TDPRRDVPVPVFSRTEGVSCFFF*QVCANK Trigger: TTTGTTAGCACAAACCTGGCAGAAAAAGAAACAAGA...CACACCCTCTGTCCTTGAAAACACTGGCACTGGAACATCTCGCCTTGGATCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR GCA 90 bp | CTCAATAGAATCCCTCTATTTGAGCTTTCCTTACACTTGGTTGTCCTTCCTTGTGATTTAGGTCTCCAATaGAGGTCCAGCGATTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LNRIPLFELSLHLVVLPCDLGLQ*RSSDLR Trigger: CCGCAAATCGCTGGACCTGCATTGGAGACCTAAATC...ACAAGGAAGGACAACCAAGTGTAAGGAAAGCTCAAATAGAGGGATTCTATTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CCA 90 bp | CTCAATAGAATCCCTCTATTTGAGCTTTCCTTACACTTGGTTGTCCTTCCTTGTCTCATAGCCATGAACTaGGGGAAACTTGGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LNRIPLFELSLHLVVLPCLIAMN*GKLGNR Trigger: TCTGTTCCCAAGTTTCCCCCAGTTCATGGCTATGAG...ACAAGGAAGGACAACCAAGTGTAAGGAAAGCTCAAATAGAGGGATTCTATTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CAA 72 bp | TTTTATTGGACGCTACGTTGTGCTCACTCAGAAGCCTaGAAATTATGGAGAACAGATCCAAGGCGAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: FYWTLRCAHSEA*KLWRTDPRRDV Trigger: AACATCTCGCCTTGGATCTGTTCTCCATAATTTCAAGGCTTCTGAGTGAGCACAACGTAGCGTCCAATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CAA 72 bp | TCCCTGTCTGATGACTTTTGCTTGACTCTTAAGCTTTaGAACTCGGAACCCACATCCCATAGTCTATTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSDDFCLTLKL*NSEPTSHSLLS Trigger: GCTTAATAGACTATGGGATGTGGGTTCCGAGTTCAAAAGCTTAAGAGTCAAGCAAAAGTCATCAGACAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTAAATACCTGCCTCTTGTACTTGATTTTAACACGAAATCAACTCTTCACAGCAGGTCCAGCGATTTaGGGAGCCCTTTATGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCLLYLILTRNQLFTAGPAI*GALYGN Trigger: GTTTCCATAAAGGGCTCCGCAAATCGCTGGACCTGC...TGTGAAGAGTTGATTTCGTGTTAAAATCAAGTACAAGAGGCAGGTATTTAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCTTGTGATTTCTTGACTCATATCATGCTTAGATATGATCTCCCTGTTGTAGCAGGTCCAGCGATTTaGGGAGCCCTTTATGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KSCDFLTHIMLRYDLPVVAGPAI*GALYGN Trigger: GTTTCCATAAAGGGCTCCGCAAATCGCTGGACCTGC...TACAACAGGGAGATCATATCTAAGCATGATATGAGTCAAGAAATCACAAGACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTCTATTTGAGCTTTCCTTACACTTGGTTGTCCTTCCTTGTATCACTGGATTTGCGGAGCCCTTTATaGAAACACACCATTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLYLSFPYTWLSFLVSLDLRSPL*KHTIWN Trigger: ATTCCAAATGGTGTGTTTCCATAAAGGGCTCCGCAA...ATCCAGTGATACAAGGAAGGACAACCAAGTGTAAGGAAAGCTCAAATAGAGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR TCA 90 bp | CTCAATAGAATCCCTCTATTTGAGCTTTCCTTACACTTGGTTGTCCTTCCTTGTGATTCTTTGTACAGATaGATCCTCCACCTCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNRIPLFELSLHLVVLPCDSLYR*ILHLLR Trigger: CCTTAAGAGGTGGAGGATTCATCTGTACAAAGAATC...ACAAGGAAGGACAACCAAGTGTAAGGAAAGCTCAAATAGAGGGATTCTATTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTCACTTCCTTTACTGTCTTCTGGAAATTCAGTTAAGGGCACAGCTTCAGACACACCATTTGGAATaGTCTTGGCGAGAACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIHFLYCLLEIQLRAQLQTHHLE*SWRELK Trigger: CTTCAGTTCTCGCCAAGACCATTCCAAATGGTGTGT...CTGAAGCTGTGCCCTTAACTGAATTTCCAGAAGACAGTAAAGGAAGTGAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CCA 90 bp | CTCAATAGAATCCCTCTATTTGAGCTTTCCTTACACTTGGTTGTCCTTCCTTGTTTGCGGAGCCCTTTATaGAAACACACCATTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LNRIPLFELSLHLVVLPCLRSPL*KHTIWN Trigger: ATTCCAAATGGTGTGTTTCCATAAAGGGCTCCGCAA...ACAAGGAAGGACAACCAAGTGTAAGGAAAGCTCAAATAGAGGGATTCTATTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR TCA 90 bp | CCTAAATACCTGCCTCTTGTACTTGATTTTAACACGAAATCAACTCTTCACAGCATATTCATTTCTGCATaGGATTTCTGGTGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PKYLPLVLDFNTKSTLHSIFISA*DFWCPQ Trigger: CTGGGGACACCAGAAATCTCATGCAGAAATGAATAT...GCTGTGAAGAGTTGATTTCGTGTTAAAATCAAGTACAAGAGGCAGGTATTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR GCA 90 bp | CCTAAATACCTGCCTCTTGTACTTGATTTTAACACGAAATCAACTCTTCACAGCCATGTCCATACTGTCTaGTGTAATTCACAGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PKYLPLVLDFNTKSTLHSHVHTV*CNSQIQ Trigger: CTGGATCTGTGAATTACAGCAGACAGTATGGACATG...GCTGTGAAGAGTTGATTTCGTGTTAAAATCAAGTACAAGAGGCAGGTATTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCTTGTGATTTCTTGACTCATATCATGCTTAGATATGATCTCCCTGTTGTAGAAAGGTGCTTGGAATaGAGCAGCTGTAGATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KSCDFLTHIMLRYDLPVVERCLE*SSCRCL Trigger: CAAACATCTACAGCTGCTTCATTCCAAGCACCTTTC...TACAACAGGGAGATCATATCTAAGCATGATATGAGTCAAGAAATCACAAGACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCTTGTGATTTCTTGACTCATATCATGCTTAGATATGATCTCCCTGTTGTAAGGCAGGGAACAGTTTaGAGGAAGCTCTTGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSCDFLTHIMLRYDLPVVRQGTV*RKLLFL Trigger: AAGAAACAAGAGCTTCCTTCAAACTGTTCCCTGCCT...TACAACAGGGAGATCATATCTAAGCATGATATGAGTCAAGAAATCACAAGACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR GCA 90 bp | TCCCTCTATTTGAGCTTTCCTTACACTTGGTTGTCCTTCCTTGTATCACTGGATTCTTGTTTCTTTTTCTaGCAGGTTTGTGCTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLYLSFPYTWLSFLVSLDSCFFF*QVCANK Trigger: TTTGTTAGCACAAACCTGGCAGAAAAAGAAACAAGA...ATCCAGTGATACAAGGAAGGACAACCAAGTGTAAGGAAAGCTCAAATAGAGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTGTGATTTCTTGACTCATATCATGCTTAGATATGATCTCCCTGTTGTACCAGTGAAAGGTGCTTaGAATGAAGCAGCTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSCDFLTHIMLRYDLPVVPVKGA*NEAAVD Trigger: ATCTACAGCTGCTTCATTCCAAGCACCTTTCACTGG...TACAACAGGGAGATCATATCTAAGCATGATATGAGTCAAGAAATCACAAGACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTAAATACCTGCCTCTTGTACTTGATTTTAACACGAAATCAACTCTTCACACCAGTGAAAGGTGCTTaGAATGAAGCAGCTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCLLYLILTRNQLFTPVKGA*NEAAVD Trigger: ATCTACAGCTGCTTCATTCCAAGCACCTTTCACTGG...TGTGAAGAGTTGATTTCGTGTTAAAATCAAGTACAAGAGGCAGGTATTTAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAGGAAAATATTGTATTCTGTCCCCTGGTGCTATTACTTACATATCATGATTGTGTCTTCAACTTTTaGGCTATCCATCCTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LEENIVFCPLVLLLTYHDCVFNF*AIHPVK Trigger: CTTTACAGGATGGATAGCTCAAAAGTTGAAGACACA...ATCATGATATGTAAGTAATAGCACCAGGGGACAGAATACAATATTTTCCTCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR TCA 90 bp | GATCCTATATTTATTCACTTCCTTTACTGTCTTCTGGAAATTCAGTTAAGGGCATTACCCCAATGGACTTaGTGTTGTAGACATGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DPIFIHFLYCLLEIQLRALPQWT*CCRHGK Trigger: CTTACCATGTCTACAACATCAAGTCCATTGGGGTAA...TGCCCTTAACTGAATTTCCAGAAGACAGTAAAGGAAGTGAATAAATATAGGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAGGAAAATATTGTATTCTGTCCCCTGGTGCTATTACTTACATATCATGATTGTAAGACCAAGAGCTaGAAATCTATTTCCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LEENIVFCPLVLLLTYHDCKTKS*KSISSN Trigger: GTTTGAGGAAATAGATTTTCAGCTCTTGGTCTTACA...ATCATGATATGTAAGTAATAGCACCAGGGGACAGAATACAATATTTTCCTCCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTAAATACCTGCCTCTTGTACTTGATTTTAACACGAAATCAACTCTTCACATGTGTCTTCAACTTTTaGGCTATCCATCCTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILNTCLLYLILTRNQLFTCVFNF*AIHPVK Trigger: CTTTACAGGATGGATAGCTCAAAAGTTGAAGACACA...TGTGAAGAGTTGATTTCGTGTTAAAATCAAGTACAAGAGGCAGGTATTTAGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CAA 72 bp | TCTGTCCCCTGGTGCTATTACTTACATATCATGATTTaGATTTCTAATTCCATACATGCAGATGACTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SVPWCYYLHIMI*ISNSIHADDSY Trigger: ATAGGAGTCATCTGCATGTATGGAATTAGAAATCAAAATCATGATATGTAAGTAATAGCACCAGGGGACAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CAA 72 bp | CTAGTGTATAATTTTAGCTCAATAGAATCCCTCTATTaGAGCTTTCCTTACACTTGGTTGTCCTTCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVYNFSSIESLY*SFPYTWLSFLV Trigger: TACAAGGAAGGACAACCAAGTGTAAGGAAAGCTCAAATAGAGGGATTCTATTGAGCTAAAATTATACACTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| 3UTR CAA 72 bp | CATTGGGCCATTAGACCCTACCATCTTTGGTTTATGTaGAGATCTCAAGATAGTTATGATCCTATATTTATT | + |
|
Preference number: 4 (lower is better) Translates to: HWAIRPYHLWFM*RSQDSYDPIFI Trigger: AATAAATATAGGATCATAACTATCTTGAGATCTCAACATAAACCAAAGATGGTAGGGTCTAATGGCCCAATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS GCA 90 bp | AGGCTCTTGTTCCAGGTTTGTCTTGTGGAGTCCAGGTACAGGTACTaGAGCCCCGCCTCTTCACTTGCCTTGCTAGTCCTTTTGGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RLLFQVCLVESRYRY*SPASSLALLVLLGN Trigger: GTTACCCAAAAGGACTAGCAAGGCAAGTGAAGAGGCGGGGCTGCAGTACCTGTACCTGGACTCCACAAGACAAACCTGGAACAAGAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS CCA 90 bp | GAAAGTGATGCAGATGCCGGTTTGTCCATATCGCCTCCCCGAGGTTaGGTACTCATAGCCATGAACTGGGGGAAACTTGGGAACAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ESDADAGLSISPPRG*VLIAMNWGKLGNRV Trigger: CACTCTGTTCCCAAGTTTCCCCCAGTTCATGGCTATGAGTACCCAACCTCGGGGAGGCGATATGGACAAACCGGCATCTGCATCACTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS GCA 90 bp | CTCCACCTCTTAAGGCTTGGTGTAGGCTTCGATTTAGGTCTCCAATaGAGGTCCAGCGATTTGCGGAGCCCTTTATGGAAACACACCATT | + |
|
Preference number: 5 (lower is better) Translates to: LHLLRLGVGFDLGLQ*RSSDLRSPLWKHTI Trigger: AATGGTGTGTTTCCATAAAGGGCTCCGCAAATCGCTGGACCTGCATTGGAGACCTAAATCGAAGCCTACACCAAGCCTTAAGAGGTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGAACAGATCCAAGGCGAGATGTTCCAGTGCCAGTGTTTTCAAGGACAGAGGCTCTTGTTCCAGGTTaGTCTTGTGGAGTCCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: WRTDPRRDVPVPVFSRTEALVPG*SCGVQV Trigger: TACCTGGACTCCACAAGACAAACCTGGAACAAGAGC...CTCTGTCCTTGAAAACACTGGCACTGGAACATCTCGCCTTGGATCTGTTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGCACCTTTATTTTCTTCAAACAGGACAGTCAGGGTTGCTTTGTGAGAGATGATGCAGATGCCGGTTaGTCCATATCGCCTCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: EGTFIFFKQDSQGCFVRDDADAG*SISPPR Trigger: TCGGGGAGGCGATATGGACAAACCGGCATCTGCATC...ATCTCTCACAAAGCAACCCTGACTGTCCTGTTTGAAGAAAATAAAGGTGCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS GCA 90 bp | AAACTTGATTTTGCAAAATGGACGAAGTTTAGACCCTGGGCTGAGTaGAGTTCAGCGAGGTACCGGACAGGGATCTTTAAGGAACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KLDFAKWTKFRPWAE*SSARYRTGIFKELE Trigger: CTCCAGTTCCTTAAAGATCCCTGTCCGGTACCTCGCTGAACTGCACTCAGCCCAGGGTCTAAACTTCGTCCATTTTGCAAAATCAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CAA 90 bp | GGGCACAGCTTCAGAGGCCAAATAGACCTCTATTATACTAGGCAAGTGTTTGGAGCCTCTTCACTTGCCTaGCTAGTCCTTTTGGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: GHSFRGQIDLYYTRQVFGASSLA*LVLLGN Trigger: GTTACCCAAAAGGACTAGCAAGGCAAGTGAAGAGGC...TCCAAACACTTGCCTAGTATAATAGAGGTCTATTTGGCCTCTGAAGCTGTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTCCTTCCTTGTATCACTGGATCAGTTTTGACCCTCTCCACCTGGAATCATGCTCTTGTTCCAGGTTaGTCTTGTGGAGTCCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VVLPCITGSVLTLSTWNHALVPG*SCGVQV Trigger: TACCTGGACTCCACAAGACAAACCTGGAACAAGAGC...ATGATTCCAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS GCA 90 bp | GCGTTCTGTTCCATACCAGCAGACCTTTGGCATGTCCATACTGTCTaGTGTAATTCACAGATCCAGGGACACCATCGTTGTATATTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: AFCSIPADLWHVHTV*CNSQIQGHHRCILD Trigger: ATCTAATATACAACGATGGTGTCCCTGGATCTGTGAATTACAGCAGACAGTATGGACATGCCAAAGGTCTGCTGGTATGGAACAGAACGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS CCA 90 bp | ATCCAGGGACACCATCGTTGTATATTAGATAGGCTGTGTCATTCGTaGAATTATGTGTGTCATACAGATGCTGTAAGGTCCTCCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: IQGHHRCILDRLCHS*NYVCHTDAVRSSPE Trigger: CTCTGGGGAGGACCTTACAGCATCTGTATGACACACATAATTCCACGAATGACACAGCCTATCTAATATACAACGATGGTGTCCCTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CAA 90 bp | CTCAATAGAATCCCTCTATTTGAGCTTTCCTTACACTTGGTTGTCCTTCCTTGTGCCTCTTCACTTGCCTaGCTAGTCCTTTTGGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LNRIPLFELSLHLVVLPCASSLA*LVLLGN Trigger: GTTACCCAAAAGGACTAGCAAGGCAAGTGAAGAGGC...ACAAGGAAGGACAACCAAGTGTAAGGAAAGCTCAAATAGAGGGATTCTATTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTAAATACCTGCCTCTTGTACTTGATTTTAACACGAAATCAACTCTTCACAGATGCAGATGCCGGTTaGTCCATATCGCCTCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: ILNTCLLYLILTRNQLFTDADAG*SISPPR Trigger: TCGGGGAGGCGATATGGACAAACCGGCATCTGCATC...TGTGAAGAGTTGATTTCGTGTTAAAATCAAGTACAAGAGGCAGGTATTTAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTAAATACCTGCCTCTTGTACTTGATTTTAACACGAAATCAACTCTTCACATTTAAGGAACTGGAGTaGGCACACATCCGGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: ILNTCLLYLILTRNQLFTFKELE*AHIRGM Trigger: CATGCCCCGGATGTGTGCCAACTCCAGTTCCTTAAA...TGTGAAGAGTTGATTTCGTGTTAAAATCAAGTACAAGAGGCAGGTATTTAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CAA 90 bp | GATCCTATATTTATTCACTTCCTTTACTGTCTTCTGGAAATTCAGTTAAGGGCATTTAAGGAACTGGAGTaGGCACACATCCGGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: DPIFIHFLYCLLEIQLRAFKELE*AHIRGM Trigger: CATGCCCCGGATGTGTGCCAACTCCAGTTCCTTAAA...TGCCCTTAACTGAATTTCCAGAAGACAGTAAAGGAAGTGAATAAATATAGGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CAA 90 bp | GGGCACAGCTTCAGAGGCCAAATAGACCTCTATTATACTAGGCAAGTGTTTGGAATGTGTCTTCAACTTTaGAGCTATCCATCCTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: GHSFRGQIDLYYTRQVFGMCLQL*SYPSCK Trigger: TTTACAGGATGGATAGCTCAAAAGTTGAAGACACAT...TCCAAACACTTGCCTAGTATAATAGAGGTCTATTTGGCCTCTGAAGCTGTGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTGTGATTTCTTGACTCATATCATGCTTAGATATGATCTCCCTGTTGTACATACCAGCAGACCTTaGGCATGTCCATACTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KSCDFLTHIMLRYDLPVVHTSRP*ACPYCL Trigger: CAGACAGTATGGACATGCCAAAGGTCTGCTGGTATG...TACAACAGGGAGATCATATCTAAGCATGATATGAGTCAAGAAATCACAAGACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAGGAAAATATTGTATTCTGTCCCCTGGTGCTATTACTTACATATCATGATATGTGTCTTCAACTTTaGAGCTATCCATCCTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LEENIVFCPLVLLLTYHDMCLQL*SYPSCK Trigger: TTTACAGGATGGATAGCTCAAAAGTTGAAGACACAT...ATCATGATATGTAAGTAATAGCACCAGGGGACAGAATACAATATTTTCCTCCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS CAA 90 bp | AGCACTCCTGGTGCTGTTAATCAGGTAGAGGCTCTTGTTCCAGGTTaGTCTTGTGGAGTCCAGGTACAGGTACTGCAGCCCCGCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: STPGAVNQVEALVPG*SCGVQVQVLQPRLF Trigger: GAAGAGGCGGGGCTGCAGTACCTGTACCTGGACTCCACAAGACAAACCTGGAACAAGAGCCTCTACCTGATTAACAGCACCAGGAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS GCA 72 bp | TTCCAGGTTTGTCTTGTGGAGTCCAGGTACAGGTACTaGAGCCCCGCCTCTTCACTTGCCTTGCTAGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FQVCLVESRYRY*SPASSLALLVL Trigger: AAGGACTAGCAAGGCAAGTGAAGAGGCGGGGCTGCAGTACCTGTACCTGGACTCCACAAGACAAACCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS CCA 72 bp | TCGCCTCCCCGAGGTTGGGTACTCATAGCCATGAACTaGGGGAAACTTGGGAACAGAGTGTATCAGCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SPPRGWVLIAMN*GKLGNRVYQPE Trigger: TTCTGGCTGATACACTCTGTTCCCAAGTTTCCCCCAGTTCATGGCTATGAGTACCCAACCTCGGGGAGGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS CAA 72 bp | GGTGCTGTTAATCAGGTAGAGGCTCTTGTTCCAGGTTaGTCTTGTGGAGTCCAGGTACAGGTACTGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GAVNQVEALVPG*SCGVQVQVLQP Trigger: GGGCTGCAGTACCTGTACCTGGACTCCACAAGACAAACCTGGAACAAGAGCCTCTACCTGATTAACAGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS TCA 72 bp | AAACCAGTCCACAGCTTCACCATATTCATTTCTGCATaGGATTTCTGGTGTCCCCAGGACCCCAGAGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KPVHSFTIFISA*DFWCPQDPREG Trigger: GCCCTCTCTGGGGTCCTGGGGACACCAGAAATCTCATGCAGAAATGAATATGGTGAAGCTGTGGACTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS GCA 72 bp | GGAAACTTGGGAACAGAGTGTATCAGCCAGAACCCCTaGGTTCTGTTCCATACCAGCAGACCTTTGGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: GNLGTECISQNP*VLFHTSRPLAC Trigger: ACATGCCAAAGGTCTGCTGGTATGGAACAGAACGCAGGGGTTCTGGCTGATACACTCTGTTCCCAAGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS CCA 72 bp | CTCCAATGCAGGTCCAGCGATTTGCGGAGCCCTTTATaGAAACACACCATTTGGAATGGTCTTGGCGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LQCRSSDLRSPL*KHTIWNGLGEN Trigger: GTTCTCGCCAAGACCATTCCAAATGGTGTGTTTCCATAAAGGGCTCCGCAAATCGCTGGACCTGCATTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS CAA 72 bp | AAACTGGCTGTATCCGAAAGTGATGCAGATGCCGGTTaGTCCATATCGCCTCCCCGAGGTTGGGTACTCATA | + |
|
Preference number: 6 (lower is better) Translates to: KLAVSESDADAG*SISPPRGWVLI Trigger: TATGAGTACCCAACCTCGGGGAGGCGATATGGACAAACCGGCATCTGCATCACTTTCGGATACAGCCAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS CAA 90 bp | TATTTCCTCAAACTGGCTGTATCCGAAAGTGATGCAGATGCCGGTTaGTCCATATCGCCTCCCCGAGGTTGGGTACTCATAGCCATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: YFLKLAVSESDADAG*SISPPRGWVLIAMN Trigger: GTTCATGGCTATGAGTACCCAACCTCGGGGAGGCGATATGGACAAACCGGCATCTGCATCACTTTCGGATACAGCCAGTTTGAGGAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS CAA 90 bp | CTTGGTGTAGGCTTCGATTTAGGTCTCCAATGCAGGTCCAGCGATTaGCGGAGCCCTTTATGGAAACACACCATTTGGAATGGTCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGVGFDLGLQCRSSD*RSPLWKHTIWNGLG Trigger: GCCAAGACCATTCCAAATGGTGTGTTTCCATAAAGGGCTCCGCAAATCGCTGGACCTGCATTGGAGACCTAAATCGAAGCCTACACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS GCA 72 bp | TTTGCAAAATGGACGAAGTTTAGACCCTGGGCTGAGTaGAGTTCAGCGAGGTACCGGACAGGGATCTTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: FAKWTKFRPWAE*SSARYRTGIFK Trigger: CTTAAAGATCCCTGTCCGGTACCTCGCTGAACTGCACTCAGCCCAGGGTCTAAACTTCGTCCATTTTGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS CCA 72 bp | AAACTTGATTTTGCAAAATGGACGAAGTTTAGACCCTaGGCTGAGTGCAGTTCAGCGAGGTACCGGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: KLDFAKWTKFRP*AECSSARYRTG Trigger: CCCTGTCCGGTACCTCGCTGAACTGCACTCAGCCCAGGGTCTAAACTTCGTCCATTTTGCAAAATCAAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS GCA 72 bp | TCCATACCAGCAGACCTTTGGCATGTCCATACTGTCTaGTGTAATTCACAGATCCAGGGACACCATCGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SIPADLWHVHTV*CNSQIQGHHRC Trigger: ACAACGATGGTGTCCCTGGATCTGTGAATTACAGCAGACAGTATGGACATGCCAAAGGTCTGCTGGTATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS GCA 72 bp | TTAAGGCTTGGTGTAGGCTTCGATTTAGGTCTCCAATaGAGGTCCAGCGATTTGCGGAGCCCTTTATGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LRLGVGFDLGLQ*RSSDLRSPLWK Trigger: TTTCCATAAAGGGCTCCGCAAATCGCTGGACCTGCATTGGAGACCTAAATCGAAGCCTACACCAAGCCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS CAA 72 bp | GGCTTCGATTTAGGTCTCCAATGCAGGTCCAGCGATTaGCGGAGCCCTTTATGGAAACACACCATTTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GFDLGLQCRSSD*RSPLWKHTIWN Trigger: ATTCCAAATGGTGTGTTTCCATAAAGGGCTCCGCAAATCGCTGGACCTGCATTGGAGACCTAAATCGAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS CCA 72 bp | TTCTTTGTACAGATGAATCCTCCACCTCTTAAGGCTTaGTGTAGGCTTCGATTTAGGTCTCCAATGCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: FFVQMNPPPLKA*CRLRFRSPMQV Trigger: GACCTGCATTGGAGACCTAAATCGAAGCCTACACCAAGCCTTAAGAGGTGGAGGATTCATCTGTACAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||
| CDS CCA 72 bp | CACCATCGTTGTATATTAGATAGGCTGTGTCATTCGTaGAATTATGTGTGTCATACAGATGCTGTAAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HHRCILDRLCHS*NYVCHTDAVRS Trigger: GGACCTTACAGCATCTGTATGACACACATAATTCCACGAATGACACAGCCTATCTAATATACAACGATGGTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029836.9 ENSMUST00000200633.2 |
||