Pregenerated sensors for DNASE2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003812Ensembl transcript IDs: ENSMUST00000003910.13, ENSMUST00000109744.8, ENSMUST00000134569.2, ENSMUST00000145292.8
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTATTACACTGCTATTCCAGGGCTCATGGAGGACATGTTGGTTCTTaGTCACCGTCTCTAGGTCAGGTAATTTCTGAGCGAAGAAGCCTT | + |
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Preference number: 1 (lower is better) Translates to: VLHCYSRAHGGHVGS*SPSLGQVISERRSL Trigger: AAGGCTTCTTCGCTCAGAAATTACCTGACCTAGAGACGGTGATCAAGAACCAACATGTCCTCCATGAGCCCTGGAATAGCAGTGTAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGCGATCCACCTGCCTCTaGCTCCCAAGTGCTGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: TAKATQRNPVSKNQRERERSTCL*LPSAGV Trigger: TACCCCAGCACTTGGGAGGCAGAGGCAGGTGGATCG...CTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGAACTGGTATTCAGATTCATAGCTGGGACAGGGAGTGTGGCTCAGCAGCACAAGGGTTCTCTGTGTTaGCCTGGCTCTCCTGGAACT | + |
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Preference number: 2 (lower is better) Translates to: TELVFRFIAGTGSVAQQHKGSLC*PGSPGT Trigger: AGTTCCAGGAGAGCCAGGGCAACACAGAGAACCCTT...GTGCTGCTGAGCCACACTCCCTGTCCCAGCTATGAATCTGAATACCAGTTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109744.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGAACTGGTATTCAGATTCATAGCTGGGACAGGGAGTGTGGCTCAGCAGCACTCTTCTTCTTTTCTTTaGGACAAGGGTTCTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TELVFRFIAGTGSVAQQHSSSFL*DKGSLC Trigger: ACACAGAGAACCCTTGTCTCAAAGAAAAGAAGAAGA...GTGCTGCTGAGCCACACTCCCTGTCCCAGCTATGAATCTGAATACCAGTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109744.8 |
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| 3UTR GCA 72 bp | AACCAGAGAGAGAGAGAGAATCGATCCACCTGCCTCTaGCTCCCAAGTGCTGGGGTAAAGGCTAGTCCGGCC | + |
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Preference number: 3 (lower is better) Translates to: NQRERENRSTCL*LPSAGVKASPA Trigger: GGCCGGACTAGCCTTTACCCCAGCACTTGGGAGGCAGAGGCAGGTGGATCGATTCTCTCTCTCTCTCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| 3UTR GCA 72 bp | TCGAAAAACCAGAGAGAGAGAGAGAATCGATCCACCTaGCTCTGCCTCCCAAGTGCTGGGGTAAAGGCTAGT | + |
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Preference number: 3 (lower is better) Translates to: SKNQRERENRST*LCLPSAGVKAS Trigger: ACTAGCCTTTACCCCAGCACTTGGGAGGCAGAGGCAGGTGGATCGATTCTCTCTCTCTCTCTGGTTTTTCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| 3UTR TCA 72 bp | TGCTATTCCAGGGCTCATGGAGGACATGTTGGTTCTTaGTCACCGTCTCTAGGTCAGGTAATTTCTGAGCGA | + |
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Preference number: 3 (lower is better) Translates to: CYSRAHGGHVGS*SPSLGQVISER Trigger: TCGCTCAGAAATTACCTGACCTAGAGACGGTGATCAAGAACCAACATGTCCTCCATGAGCCCTGGAATAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
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| 3UTR CCA 72 bp | TGGGAAGTGAGTATTACACTGCTATTCCAGGGCTCATaGAGGACATGTTGGTTCTTGATCACCGTCTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: WEVSITLLFQGS*RTCWFLITVSR Trigger: CCTAGAGACGGTGATCAAGAACCAACATGTCCTCCATGAGCCCTGGAATAGCAGTGTAATACTCACTTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
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| 3UTR CCA 72 bp | ATTACACTGCTATTCCAGGGCTCATGGAGGACATGTTaGTTCTTGATCACCGTCTCTAGGTCAGGTAATTTC | + |
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Preference number: 3 (lower is better) Translates to: ITLLFQGSWRTC*FLITVSRSGNF Trigger: GAAATTACCTGACCTAGAGACGGTGATCAAGAACCAACATGTCCTCCATGAGCCCTGGAATAGCAGTGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
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| CDS-3UTR CCA 90 bp | CTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGATCCACCTGCCTCTGCCTCCAGAGGACGCAGGGGGTaGGAAGCGAGGCACACTGTG | + |
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Preference number: 4 (lower is better) Translates to: LSRKTRERERIDPPASASRGRRG*EARHTV Trigger: CACAGTGTGCCTCGCTTCCCACCCCCTGCGTCCTCT...GGAGGCAGAGGCAGGTGGATCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR GCA 90 bp | GACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAACAATGGCTGCAAGCTaGGGCCCACGGCTCCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DSQGYTEKPCLEKPERERTMAAS*GPRLPP Trigger: CGGAGGGAGCCGTGGGCCGCAGCTTGCAGCCATTGT...TCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | CTGCTATTCCAGGGCTCATGGAGGACATGTTGGTTCTTGATCACCGTCTCTAGGAGAGGACGCAGGGGGTaGGAAGCGAGGCACACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLFQGSWRTCWFLITVSRRGRRG*EARHTV Trigger: CACAGTGTGCCTCGCTTCCCACCCCCTGCGTCCTCT...CCTAGAGACGGTGATCAAGAACCAACATGTCCTCCATGAGCCCTGGAATAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
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| CDS-3UTR TCA 90 bp | GCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCAGGCCCAGGGCCCTTaGGGGGCCACACACCATTTG | + |
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Preference number: 4 (lower is better) Translates to: AKATQRNPVSKNQRERENQAQGP*GATHHL Trigger: CAAATGGTGTGTGGCCCCTCAAGGGCCCTGGGCCTG...ATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | ACTGAACTGGTATTCAGATTCATAGCTGGGACAGGGAGTGTGGCTCAGCAGCACAGGCTCCAGAGCAGTTaGAGGGCAGGATGCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: TELVFRFIAGTGSVAQQHRLQSS*RAGCLE Trigger: CTCCAGGCATCCTGCCCTCCAACTGCTCTGGAGCCT...GTGCTGCTGAGCCACACTCCCTGTCCCAGCTATGAATCTGAATACCAGTTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109744.8 |
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| CDS-3UTR TCA 90 bp | CTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGATCCACCTGCCTCTGCCTCCCTCCCTCCGAGCTGTTaGTGTACCCTACACCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LSRKTRERERIDPPASASLPPSC*CTLHRL Trigger: AAGACGGTGTAGGGTACATCAACAGCTCGGAGGGAG...GGAGGCAGAGGCAGGTGGATCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR GCA 90 bp | AAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGAACAATGGCTGCAAGCTaGGGCCCACGGCTCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: KATQRNPVSKNQRERENRTMAAS*GPRLPP Trigger: CGGAGGGAGCCGTGGGCCGCAGCTTGCAGCCATTGT...TCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR GCA 90 bp | GAGTATTACACTGCTATTCCAGGGCTCATGGAGGACATGTTGGTTCTTGATCACACAATGGCTGCAAGCTaGGGCCCACGGCTCCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: EYYTAIPGLMEDMLVLDHTMAAS*GPRLPP Trigger: CGGAGGGAGCCGTGGGCCGCAGCTTGCAGCCATTGT...GTGATCAAGAACCAACATGTCCTCCATGAGCCCTGGAATAGCAGTGTAATACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
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| CDS-3UTR GCA 90 bp | GCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATAGGAGGCCAGGTGTATaGACCAGAGGACGCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKATQRNPVSKNQRERENRRPGV*TRGRRG Trigger: CCCCCTGCGTCCTCTGGTGCATACACCTGGCCTCCT...ATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | GACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGACAGAAGCCCCCTTCTTaGTCCAGGAGCAGGACACCC | + |
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Preference number: 4 (lower is better) Translates to: DSQGYTEKPCLEKPERERQKPPS*SRSRTP Trigger: GGGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTG...TCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | ACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGCAGAAGCCCCCTTCTTaGTCCAGGAGCAGGACACCC | + |
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Preference number: 4 (lower is better) Translates to: TAKATQRNPVSKNQREREQKPPS*SRSRTP Trigger: GGGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTG...CTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | ACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAAGCGAGGCACACTGTaGACCAGCCAGAAGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: TAKATQRNPVSKNQREREKRGTL*TSQKPP Trigger: AGGGGGCTTCTGGCTGGTCCACAGTGTGCCTCGCTT...CTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | CCAGCTTGGGAAGTGAGTATTACACTGCTATTCCAGGGCTCATGGAGGACATGTAAGCGAGGCACACTGTaGACCAGCCAGAAGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: PAWEVSITLLFQGSWRTCKRGTL*TSQKPP Trigger: AGGGGGCTTCTGGCTGGTCCACAGTGTGCCTCGCTT...ACATGTCCTCCATGAGCCCTGGAATAGCAGTGTAATACTCACTTCCCAAGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
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| CDS-3UTR CCA 90 bp | GCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATAGAGGACGCAGGGGGTaGGAAGCGAGGCACACTGTG | + |
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Preference number: 4 (lower is better) Translates to: AKATQRNPVSKNQRERENRGRRG*EARHTV Trigger: CACAGTGTGCCTCGCTTCCCACCCCCTGCGTCCTCT...ATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | CTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGATCCACCTGCCTCTGCCTCCACTGGACCTGTAGGTTaGTGCCAAGGGCTTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LSRKTRERERIDPPASASTGPVG*CQGLLP Trigger: TGGCAGAAGCCCTTGGCACCAACCTACAGGTCCAGT...GGAGGCAGAGGCAGGTGGATCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | ACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAGGCTCCAGAGCAGTTaGAGGGCAGGATGCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: TAKATQRNPVSKNQRERERLQSS*RAGCLE Trigger: CTCCAGGCATCCTGCCCTCCAACTGCTCTGGAGCCT...CTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | CTGCTATTCCAGGGCTCATGGAGGACATGTTGGTTCTTGATCACCGTCTCTAGGCAGAAGCCCCCTTCTTaGTCCAGGAGCAGGACACCT | + |
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Preference number: 4 (lower is better) Translates to: LLFQGSWRTCWFLITVSRQKPPS*SRSRTP Trigger: AGGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTG...CCTAGAGACGGTGATCAAGAACCAACATGTCCTCCATGAGCCCTGGAATAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
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| CDS-3UTR GCA 90 bp | AAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGAAGGAGGCCAGGTGTATaGACCAGAGGACGCAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: KATQRNPVSKNQRERENRRRPGV*TRGRRG Trigger: CCCCCTGCGTCCTCTGGTGCATACACCTGGCCTCCT...TCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR TCA 90 bp | GACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGGTAGAGTCCCGAGCTaGGCTGGATTTAGGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: DSQGYTEKPCLEKPERERGRVPS*AGFRRL Trigger: CAACCTCCTAAATCCAGCTCAGCTCGGGACTCTACC...TCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR GCA 90 bp | CTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGATCCACCTGCCTCTGCCTCCCTGCTTGCCAATCCTTaGAAACTGAGTGAACGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSRKTRERERIDPPASASLLANP*KLSERE Trigger: CTCCCGTTCACTCAGTTTGCAAGGATTGGCAAGCAG...GGAGGCAGAGGCAGGTGGATCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | AAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGAAAGCGAGGCACACTGTaGACCAGCCAGAAGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: KATQRNPVSKNQRERENRKRGTL*TSQKPP Trigger: AGGGGGCTTCTGGCTGGTCCACAGTGTGCCTCGCTT...TCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | GACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAACTGGACCTGTAGGTTaGTGCCAAGGGCTTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: DSQGYTEKPCLEKPERERTGPVG*CQGLLP Trigger: TGGCAGAAGCCCTTGGCACCAACCTACAGGTCCAGT...TCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | GCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATGGGCCACACACCATTTaGAGTGGTCCTCTGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: AKATQRNPVSKNQRERENGPHTI*SGPLWH Trigger: GTGCCACAGAGGACCACTCCAAATGGTGTGTGGCCC...ATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR TCA 90 bp | GCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCTCCCTCCGAGCTGTTaGTGTACCCTACACCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: AKATQRNPVSKNQRERENLPPSC*CTLHRL Trigger: AAGACGGTGTAGGGTACATCAACAGCTCGGAGGGAG...ATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR GCA 90 bp | AAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGAGGTGCCAAGGGCTTCTaGCAACCATCCGGAGTACAG | + |
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Preference number: 4 (lower is better) Translates to: KATQRNPVSKNQRERENRGAKGF*QPSGVQ Trigger: CTGTACTCCGGATGGTTGGCAGAAGCCCTTGGCACC...TCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR GCA 90 bp | CTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGATCCACCTGCCTCTGCCTCCATGCCTGGAGAATTTTaGCAGAACTGGACCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LSRKTRERERIDPPASASMPGEF*QNWTCR Trigger: CCTACAGGTCCAGTTCTGGCAAAATTCTCCAGGCAT...GGAGGCAGAGGCAGGTGGATCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | ACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGGGAGGGCAGGATGCCTaGAGAATTTTGCCAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: TAKATQRNPVSKNQREREGGQDA*RILPEL Trigger: CAGTTCTGGCAAAATTCTCCAGGCATCCTGCCCTCC...CTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | AAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGAGGGCCACACACCATTTaGAGTGGTCCTCTGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KATQRNPVSKNQRERENRGPHTI*SGPLWH Trigger: GTGCCACAGAGGACCACTCCAAATGGTGTGTGGCCC...TCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | GACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGACAAAAGGAAGGCAGTTaGGTGCATACTGTGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: DSQGYTEKPCLEKPERERQKEGS*VHTVPP Trigger: TGGCGGCACAGTATGCACCCAACTGCCTTCCTTTTG...TCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR TCA 90 bp | GAGTATTACACTGCTATTCCAGGGCTCATGGAGGACATGTTGGTTCTTGATCACCTCCCTCCGAGCTGTTaGTGTACCCTACACCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: EYYTAIPGLMEDMLVLDHLPPSC*CTLHRL Trigger: AAGACGGTGTAGGGTACATCAACAGCTCGGAGGGAG...GTGATCAAGAACCAACATGTCCTCCATGAGCCCTGGAATAGCAGTGTAATACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
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| CDS-3UTR GCA 90 bp | ACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGCTGCTTGCCAATCCTTaGAAACTGAGTGAACGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TAKATQRNPVSKNQRERELLANP*KLSERE Trigger: CTCCCGTTCACTCAGTTTGCAAGGATTGGCAAGCAG...CTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR GCA 90 bp | CCAGCTTGGGAAGTGAGTATTACACTGCTATTCCAGGGCTCATGGAGGACATGTCTGCTTGCCAATCCTTaGAAACTGAGTGAACGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PAWEVSITLLFQGSWRTCLLANP*KLSERE Trigger: CTCCCGTTCACTCAGTTTGCAAGGATTGGCAAGCAG...ACATGTCCTCCATGAGCCCTGGAATAGCAGTGTAATACTCACTTCCCAAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
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| CDS-3UTR GCA 90 bp | ACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAGTTGGAGGGCAGGATaGCTGGAGAATTTTGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TAKATQRNPVSKNQRERESWRAG*LENFAR Trigger: TCTGGCAAAATTCTCCAGGCATCCTGCCCTCCAACT...CTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | CTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGATCCACCTGCCTCTGCCTCCCAACCGTCGGAGTTCTaGTCCATGTATTTATACGTC | + |
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Preference number: 4 (lower is better) Translates to: LSRKTRERERIDPPASASQPSEF*SMYLYV Trigger: GACGTATAAATACATGGACCAGAACTCCGACGGTTG...GGAGGCAGAGGCAGGTGGATCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | GACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAAGTAGAAAGGCCAGCTaGCTGGAGTTCTTTCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: DSQGYTEKPCLEKPERERSRKAS*LEFFRY Trigger: GTACCGAAAGAACTCCAGCCAGCTGGCCTTTCTACT...TCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS-3UTR CCA 90 bp | GAGTATTACACTGCTATTCCAGGGCTCATGGAGGACATGTTGGTTCTTGATCACCAGGAGCAGGACACCTaGCTGGAGTTCTTTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EYYTAIPGLMEDMLVLDHQEQDT*LEFFRY Trigger: GTACCGAAAGAACTCCAGCCAGGTGTCCTGCTCCTG...GTGATCAAGAACCAACATGTCCTCCATGAGCCCTGGAATAGCAGTGTAATACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGATCCTTGCAAACTGAGTaGACGGGAGGGACACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KATQRNPVSKNQRERENRSLQTE*TGGTHR Trigger: TCTGTGTGTCCCTCCCGTTCACTCAGTTTGCAAGGA...TCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR GCA 90 bp | GCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATAGTTGGAGGGCAGGATaGCTGGAGAATTTTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AKATQRNPVSKNQRERENSWRAG*LENFAR Trigger: TCTGGCAAAATTCTCCAGGCATCCTGCCCTCCAACT...ATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGACAAAAGGAAGGCAGTTaGGTGCATACTGTGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KATQRNPVSKNQRERENRQKEGS*VHTVPP Trigger: TGGCGGCACAGTATGCACCCAACTGCCTTCCTTTTG...TCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR GCA 90 bp | GCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATATGCCTGGAGAATTTTaGCAGAACTGGACCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKATQRNPVSKNQRERENMPGEF*QNWTCR Trigger: CCTACAGGTCCAGTTCTGGCAAAATTCTCCAGGCAT...ATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGAAGTAGAAAGGCCAGCTaGCTGGAGTTCTTTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KATQRNPVSKNQRERENRSRKAS*LEFFRY Trigger: GTACCGAAAGAACTCCAGCCAGCTGGCCTTTCTACT...TCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATACACACCATTTGGAGTaGTCCTCTGTGGCACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AKATQRNPVSKNQRERENTHHLE*SSVALK Trigger: TTTCAGTGCCACAGAGGACCACTCCAAATGGTGTGT...ATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGAACACACCATTTGGAGTaGTCCTCTGTGGCACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KATQRNPVSKNQRERENRTHHLE*SSVALK Trigger: TTTCAGTGCCACAGAGGACCACTCCAAATGGTGTGT...TCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGACAACCGTCGGAGTTCTaGTCCATGTATTTATACGTC | + |
|
Preference number: 4 (lower is better) Translates to: KATQRNPVSKNQRERENRQPSEF*SMYLYV Trigger: GACGTATAAATACATGGACCAGAACTCCGACGGTTG...TCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGTGAGTATTACACTGCTATTCCAGGGCTCATGGAGGACATGTTGGTTCTTCAACCGTCGGAGTTCTaGTCCATGTATTTATACGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSEYYTAIPGLMEDMLVLQPSEF*SMYLYV Trigger: GACGTATAAATACATGGACCAGAACTCCGACGGTTG...AAGAACCAACATGTCCTCCATGAGCCCTGGAATAGCAGTGTAATACTCACTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
||
| CDS-3UTR CCA 90 bp | GACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGACAAATTTTCCAAATTTaGCAAAGCTCTGGAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSQGYTEKPCLEKPERERQIFQI*QSSGRW Trigger: CCACCTTCCAGAGCTTTGCCAAATTTGGAAAATTTG...TCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CCA 90 bp | GCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCAAATTTTCCAAATTTaGCAAAGCTCTGGAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AKATQRNPVSKNQRERENQIFQI*QSSGRW Trigger: CCACCTTCCAGAGCTTTGCCAAATTTGGAAAATTTG...ATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS CCA 90 bp | GTGTATGCACCAGAGGACGCAGGGGGTGGGAAGCGAGGCACACTGTaGACCAGCCAGAAGCCCCCTTCTTGGTCCAGGAGCAGGACACCC | + |
|
Preference number: 5 (lower is better) Translates to: VYAPEDAGGGKRGTL*TSQKPPSWSRSRTP Trigger: GGGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTGGCTGGTCCACAGTGTGCCTCGCTTCCCACCCCCTGCGTCCTCTGGTGCATACAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS CCA 90 bp | GGTGGGAAGCGAGGCACACTGTGGACCAGCCAGAAGCCCCCTTCTTaGTCCAGGAGCAGGACACCCTTCGTATGCCCATGGCCGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGKRGTLWTSQKPPS*SRSRTPFVCPWPVE Trigger: CTCTACCGGCCATGGGCATACGAAGGGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTGGCTGGTCCACAGTGTGCCTCGCTTCCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS CCA 90 bp | GTGTATGCACCAGAGGACGCAGGGGGTGGGAAGCGAGGCACACTGTaGACCAGCCAGAAGCCCCCTTCTTGGTCCAGGAGCAGGACACCT | + |
|
Preference number: 5 (lower is better) Translates to: VYAPEDAGGGKRGTL*TSQKPPSWSRSRTP Trigger: AGGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTGGCTGGTCCACAGTGTGCCTCGCTTCCCACCCCCTGCGTCCTCTGGTGCATACAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
||
| CDS CCA 90 bp | GTGGACCAGCCAGAAGCCCCCTTCTTGGTCCAGGAGCAGGACACCTaGCTGGAGTTCTTTCGGTACAATGGCTGCAAGCTGCGGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: VDQPEAPFLVQEQDT*LEFFRYNGCKLRPT Trigger: CGTGGGCCGCAGCTTGCAGCCATTGTACCGAAAGAACTCCAGCCAGGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTGGCTGGTCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
||
| CDS TCA 90 bp | GGTACAATGGCTGCAAGCTGCGGCCCACGGCTCCCTCCGAGCTGTTaGTGTACCCTACACCGTCTTGCCAACCGTCGGAGTTCTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTMAASCGPRLPPSC*CTLHRLANRRSSGP Trigger: TGGACCAGAACTCCGACGGTTGGCAAGACGGTGTAGGGTACATCAACAGCTCGGAGGGAGCCGTGGGCCGCAGCTTGCAGCCATTGTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 ENSMUST00000134569.2 ENSMUST00000145292.8 |
||
| CDS GCA 90 bp | GTCCAGGAGCAGGACACCTGGCTGGAGTTCTTTCGGTACAATGGCTaGAAGCTGCGGCCCACGGCTCCCTCCGAGCTGTTGATGTACCCT | + |
|
Preference number: 5 (lower is better) Translates to: VQEQDTWLEFFRYNG*KLRPTAPSELLMYP Trigger: AGGGTACATCAACAGCTCGGAGGGAGCCGTGGGCCGCAGCTTGCAGCCATTGTACCGAAAGAACTCCAGCCAGGTGTCCTGCTCCTGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
||
| CDS CCA 90 bp | TTGAGCATTAGGAGGCCAGGTGTATGCACCAGAGGACGCAGGGGGTaGGAAGCGAGGCACACTGTGGACCAGCCAGAAGCCCCCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSIRRPGVCTRGRRG*EARHTVDQPEAPFL Trigger: CAAGAAGGGGGCTTCTGGCTGGTCCACAGTGTGCCTCGCTTCCCACCCCCTGCGTCCTCTGGTGCATACACCTGGCCTCCTAATGCTCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 ENSMUST00000145292.8 |
||
| CDS GCA 90 bp | AGCCAGAAGCCCCCTTCTTGGTCCAGGAGCAGGACACCCTTCGTATaGCCATGGCCGGTAGAGTCCCGAGCTGAGCTGGATTTAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SQKPPSWSRSRTPFV*PWPVESRAELDLGG Trigger: ACCTCCTAAATCCAGCTCAGCTCGGGACTCTACCGGCCATGGGCATACGAAGGGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS CCA 90 bp | CTTGGTCCAGGAGCAGGACACCTGGCTGGAGTTCTTTCGGTACAATaGCTGCAAGCTGCGGCCCACGGCTCCCTCCGAGCTGTTGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: LGPGAGHLAGVLSVQ*LQAAAHGSLRAVDV Trigger: TACATCAACAGCTCGGAGGGAGCCGTGGGCCGCAGCTTGCAGCCATTGTACCGAAAGAACTCCAGCCAGGTGTCCTGCTCCTGGACCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
||
| CDS CCA 90 bp | GGTGGGAAGCGAGGCACACTGTGGACCAGCCAGAAGCCCCCTTCTTaGTCCAGGAGCAGGACACCTGGCTGGAGTTCTTTCGGTACAATG | + |
|
Preference number: 5 (lower is better) Translates to: GGKRGTLWTSQKPPS*SRSRTPGWSSFGTM Trigger: CATTGTACCGAAAGAACTCCAGCCAGGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTGGCTGGTCCACAGTGTGCCTCGCTTCCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
||
| CDS GCA 90 bp | CGGCCCACGGCTCCCTCCGAGCTGTTGATGTACCCTACACCGTCTTaGCAACCGTCGGAGTTCTGGTCCATGTATTTATACGTCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPTAPSELLMYPTPS*QPSEFWSMYLYVSP Trigger: GGGACTGACGTATAAATACATGGACCAGAACTCCGACGGTTGGCAAGACGGTGTAGGGTACATCAACAGCTCGGAGGGAGCCGTGGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 ENSMUST00000134569.2 ENSMUST00000145292.8 |
||
| CDS TCA 90 bp | TCTGCTTTGTTCCTATTCATGTCACCCACACAGGCCCAGGGCCCTTaGGGGGCCACACACCATTTGGAGTGGTCCTCTGTGGCACTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SALFLFMSPTQAQGP*GATHHLEWSSVALK Trigger: TTTCAGTGCCACAGAGGACCACTCCAAATGGTGTGTGGCCCCTCAAGGGCCCTGGGCCTGTGTGGGTGACATGAATAGGAACAAAGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS CCA 90 bp | CAGTCTTTCACCAGGGACTGGAAGGCCTTCCAAAAGGAAGGCAGTTaGGTGCATACTGTGCCGCCACCTCGGTGTGTCTCTGCTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QSFTRDWKAFQKEGS*VHTVPPPRCVSALF Trigger: GAACAAAGCAGAGACACACCGAGGTGGCGGCACAGTATGCACCCAACTGCCTTCCTTTTGGAAGGCCTTCCAGTCCCTGGTGAAAGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS GCA 90 bp | GCAGGATGCCTGGAGAATTTTGCCAGAACTGGACCTGTAGGTTGGTaGCAAGGGCTTCTGCCAACCATCCGGAGTACAGGTCATCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AGCLENFARTGPVGW*QGLLPTIRSTGHLQ Trigger: TTGGAGATGACCTGTACTCCGGATGGTTGGCAGAAGCCCTTGGCACCAACCTACAGGTCCAGTTCTGGCAAAATTCTCCAGGCATCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CAA 90 bp | GCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCCAGAAGCCCCCTTCTaGGTCCAGGAGCAGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: AKATQRNPVSKNQRERENPEAPF*VQEQDT Trigger: GGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTGG...ATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGGGGGCCACACACCATTaGGAGTGGTCCTCTGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TAKATQRNPVSKNQREREGATHH*EWSSVA Trigger: TGCCACAGAGGACCACTCCAAATGGTGTGTGGCCCC...CTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS GCA 90 bp | TCACATCCAGAACCTGATAGGCTCCAGAGCAGTTGGAGGGCAGGATaGCTGGAGAATTTTGCCAGAACTGGACCTGTAGGTTGGTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SHPEPDRLQSSWRAG*LENFARTGPVGWCQ Trigger: TTGGCACCAACCTACAGGTCCAGTTCTGGCAAAATTCTCCAGGCATCCTGCCCTCCAACTGCTCTGGAGCCTATCAGGTTCTGGATGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGACCAGAAGCCCCCTTCTaGGTCCAGGAGCAGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: KATQRNPVSKNQRERENRPEAPF*VQEQDT Trigger: GGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTGG...TCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CAA 90 bp | GAGTATTACACTGCTATTCCAGGGCTCATGGAGGACATGTTGGTTCTTGATCACCCAGAAGCCCCCTTCTaGGTCCAGGAGCAGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: EYYTAIPGLMEDMLVLDHPEAPF*VQEQDT Trigger: GGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTGG...GTGATCAAGAACCAACATGTCCTCCATGAGCCCTGGAATAGCAGTGTAATACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
||
| CDS-3UTR CAA 90 bp | GACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAAACTGGACCTGTAGGTaGGTGCCAAGGGCTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: DSQGYTEKPCLEKPERERNWTCR*VPRASA Trigger: GGCAGAAGCCCTTGGCACCAACCTACAGGTCCAGTT...TCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS CCA 90 bp | ATCCTGTCTGTGTCACATCCAGAACCTGATAGGCTCCAGAGCAGTTaGAGGGCAGGATGCCTGGAGAATTTTGCCAGAACTGGACCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: ILSVSHPEPDRLQSS*RAGCLENFARTGPV Trigger: TACAGGTCCAGTTCTGGCAAAATTCTCCAGGCATCCTGCCCTCCAACTGCTCTGGAGCCTATCAGGTTCTGGATGTGACACAGACAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CAA 90 bp | CTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGATCCACCTGCCTCTGCCTCCCTCATGGAGGACATGTaGGTTCTTGATCACCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSRKTRERERIDPPASASLMEDM*VLDHRL Trigger: GAGACGGTGATCAAGAACCAACATGTCCTCCATGAG...GGAGGCAGAGGCAGGTGGATCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGAGGTCTGGCCGAAGGTTaGAGCATTAGGAGGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KATQRNPVSKNQRERENRGLAEG*SIRRPG Trigger: ACCTGGCCTCCTAATGCTCAAACCTTCGGCCAGACC...TCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGAAGTGAGTATTACACTGCTATTCCAGGGCTCATGGAGGACATGTTGGTTGGTCTGGCCGAAGGTTaGAGCATTAGGAGGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGSEYYTAIPGLMEDMLVGLAEG*SIRRPG Trigger: ACCTGGCCTCCTAATGCTCAAACCTTCGGCCAGACC...AACCAACATGTCCTCCATGAGCCCTGGAATAGCAGTGTAATACTCACTTCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGGAAGGTGGCCCCAGCTaGGGAAGTGAGTATTACACT | + |
|
Preference number: 5 (lower is better) Translates to: TAKATQRNPVSKNQREREEGGPS*GSEYYT Trigger: AGTGTAATACTCACTTCCCAAGCTGGGGCCACCTTC...CTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCGAAACTGGACCTGTAGGTaGGTGCCAAGGGCTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KATQRNPVSKNQRERENRNWTCR*VPRASA Trigger: GGCAGAAGCCCTTGGCACCAACCTACAGGTCCAGTT...TCGATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS CCA 90 bp | GAGCTGTTGATGTACCCTACACCGTCTTGCCAACCGTCGGAGTTCTaGTCCATGTATTTATACGTCAGTCCCTTTGGAGTATCCCTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ELLMYPTPSCQPSEF*SMYLYVSPFGVSLD Trigger: GTCTAGGGATACTCCAAAGGGACTGACGTATAAATACATGGACCAGAACTCCGACGGTTGGCAAGACGGTGTAGGGTACATCAACAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 ENSMUST00000134569.2 ENSMUST00000145292.8 |
||
| CDS CCA 90 bp | GCCCCAGCTTGGGAAGTGAGTATTACACTGCTATTCCAGGGCTCATaGAGGACATGTTGGTTCTTGATCACCGTCTCTAGGTCAGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: APAWEVSITLLFQGS*RTCWFLITVSRSGN Trigger: ATTACCTGACCTAGAGACGGTGATCAAGAACCAACATGTCCTCCATGAGCCCTGGAATAGCAGTGTAATACTCACTTCCCAAGCTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 ENSMUST00000134569.2 |
||
| CDS-3UTR CAA 90 bp | GCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATGAAGGTGGCCCCAGCTaGGGAAGTGAGTATTACACT | + |
|
Preference number: 5 (lower is better) Translates to: AKATQRNPVSKNQRERENEGGPS*GSEYYT Trigger: AGTGTAATACTCACTTCCCAAGCTGGGGCCACCTTC...ATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CAA 90 bp | GACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGACGGTGTGTCTCTGCTTaGTTCCTATTCATGTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: DSQGYTEKPCLEKPERERRCVSA*FLFMSP Trigger: GGGTGACATGAATAGGAACAAAGCAGAGACACACCG...TCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGCGGTGTGTCTCTGCTTaGTTCCTATTCATGTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: TAKATQRNPVSKNQRERERCVSA*FLFMSP Trigger: GGGTGACATGAATAGGAACAAAGCAGAGACACACCG...CTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
||
| CDS-3UTR CAA 90 bp | GCCAAGGCTACACAGAGAAACCCTGTCTCGAAAAACCAGAGAGAGAGAGAGAATCTCATGGAGGACATGTaGGTTCTTGATCACCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AKATQRNPVSKNQRERENLMEDM*VLDHRL Trigger: GAGACGGTGATCAAGAACCAACATGTCCTCCATGAG...ATTCTCTCTCTCTCTCTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCTTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS CCA 72 bp | AGGAGGCCAGGTGTATGCACCAGAGGACGCAGGGGGTaGGAAGCGAGGCACACTGTGGACCAGCCAGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: RRPGVCTRGRRG*EARHTVDQPEA Trigger: GGCTTCTGGCTGGTCCACAGTGTGCCTCGCTTCCCACCCCCTGCGTCCTCTGGTGCATACACCTGGCCTCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 ENSMUST00000145292.8 |
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| CDS CAA 90 bp | CGGTACAATGGCTGCAAGCTGCGGCCCACGGCTCCCTCCGAGCTGTaGATGTACCCTACACCGTCTTGCCAACCGTCGGAGTTCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: RYNGCKLRPTAPSEL*MYPTPSCQPSEFWS Trigger: GGACCAGAACTCCGACGGTTGGCAAGACGGTGTAGGGTACATCAACAGCTCGGAGGGAGCCGTGGGCCGCAGCTTGCAGCCATTGTACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 ENSMUST00000134569.2 ENSMUST00000145292.8 |
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| CDS GCA 72 bp | AAGGCCAGCTGGCTGGAGTTCTTTCGGTACAATGGCTaGAAGCTGCGGCCCACGGCTCCCTCCGAGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: KASWLEFFRYNG*KLRPTAPSELL Trigger: CAACAGCTCGGAGGGAGCCGTGGGCCGCAGCTTGCAGCCATTGTACCGAAAGAACTCCAGCCAGCTGGCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 ENSMUST00000134569.2 |
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| CDS GCA 72 bp | CCCCCTTCTTGGTCCAGGAGCAGGACACCCTTCGTATaGCCATGGCCGGTAGAGTCCCGAGCTGAGCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: PPSWSRSRTPFV*PWPVESRAELD Trigger: ATCCAGCTCAGCTCGGGACTCTACCGGCCATGGGCATACGAAGGGTGTCCTGCTCCTGGACCAAGAAGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS GCA 72 bp | CAGGACACCTGGCTGGAGTTCTTTCGGTACAATGGCTaGAAGCTGCGGCCCACGGCTCCCTCCGAGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: QDTWLEFFRYNG*KLRPTAPSELL Trigger: CAACAGCTCGGAGGGAGCCGTGGGCCGCAGCTTGCAGCCATTGTACCGAAAGAACTCCAGCCAGGTGTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
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| CDS CCA 72 bp | CGAGGCACACTGTGGACCAGCCAGAAGCCCCCTTCTTaGTCCAGGAGCAGGACACCCTTCGTATGCCCATGG | + |
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Preference number: 6 (lower is better) Translates to: RGTLWTSQKPPS*SRSRTPFVCPW Trigger: CCATGGGCATACGAAGGGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTGGCTGGTCCACAGTGTGCCTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS CCA 72 bp | CGAGGCACACTGTGGACCAGCCAGAAGCCCCCTTCTTaGTCCAGGAGCAGGACACCTGGCTGGAGTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: RGTLWTSQKPPS*SRSRTPGWSSF Trigger: GAAAGAACTCCAGCCAGGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTGGCTGGTCCACAGTGTGCCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
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| CDS CAA 90 bp | GCGGCCCACGGCTCCCTCCGAGCTGTTGATGTACCCTACACCGTCTaGCCAACCGTCGGAGTTCTGGTCCATGTATTTATACGTCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: AAHGSLRAVDVPYTV*PTVGVLVHVFIRQS Trigger: GGACTGACGTATAAATACATGGACCAGAACTCCGACGGTTGGCAAGACGGTGTAGGGTACATCAACAGCTCGGAGGGAGCCGTGGGCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 ENSMUST00000134569.2 ENSMUST00000145292.8 |
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| CDS TCA 72 bp | GGGAGGGACACACAGAGTAGGGTCTGGCCGAAGGTTTaGGCATTAGGAGGCCAGGTGTATGCACCAGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: GRDTQSRVWPKV*ALGGQVYAPED Trigger: GTCCTCTGGTGCATACACCTGGCCTCCTAATGCTCAAACCTTCGGCCAGACCCTACTCTGTGTGTCCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 ENSMUST00000145292.8 |
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| CDS TCA 72 bp | TTCCTATTCATGTCACCCACACAGGCCCAGGGCCCTTaGGGGGCCACACACCATTTGGAGTGGTCCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: FLFMSPTQAQGP*GATHHLEWSSV Trigger: CACAGAGGACCACTCCAAATGGTGTGTGGCCCCTCAAGGGCCCTGGGCCTGTGTGGGTGACATGAATAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS CCA 72 bp | CCAGAAGCCCCCTTCTTGGTCCAGGAGCAGGACACCTaGCTGGAGTTCTTTCGGTACAATGGCTGCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PEAPFLVQEQDT*LEFFRYNGCKL Trigger: CAGCTTGCAGCCATTGTACCGAAAGAACTCCAGCCAGGTGTCCTGCTCCTGGACCAAGAAGGGGGCTTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145292.8 |
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| CDS CAA 72 bp | GTTCCTATTCATGTCACCCACACAGGCCCAGGGCCCTaGAGGGGCCACACACCATTTGGAGTGGTCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: VPIHVTHTGPGP*RGHTPFGVVLC Trigger: ACAGAGGACCACTCCAAATGGTGTGTGGCCCCTCAAGGGCCCTGGGCCTGTGTGGGTGACATGAATAGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS CAA 90 bp | CTCTGCTTTGTTCCTATTCATGTCACCCACACAGGCCCAGGGCCCTaGAGGGGCCACACACCATTTGGAGTGGTCCTCTGTGGCACTGAA | + |
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Preference number: 6 (lower is better) Translates to: LCFVPIHVTHTGPGP*RGHTPFGVVLCGTE Trigger: TTCAGTGCCACAGAGGACCACTCCAAATGGTGTGTGGCCCCTCAAGGGCCCTGGGCCTGTGTGGGTGACATGAATAGGAACAAAGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS CAA 90 bp | GAGGGCAGGATGCCTGGAGAATTTTGCCAGAACTGGACCTGTAGGTaGGTGCCAAGGGCTTCTGCCAACCATCCGGAGTACAGGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: EGRMPGEFCQNWTCR*VPRASANHPEYRSS Trigger: AGATGACCTGTACTCCGGATGGTTGGCAGAAGCCCTTGGCACCAACCTACAGGTCCAGTTCTGGCAAAATTCTCCAGGCATCCTGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS CAA 90 bp | CCAGTCTTTCACCAGGGACTGGAAGGCCTTCCAAAAGGAAGGCAGTaGGGTGCATACTGTGCCGCCACCTCGGTGTGTCTCTGCTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PVFHQGLEGLPKGRQ*GAYCAATSVCLCFV Trigger: AACAAAGCAGAGACACACCGAGGTGGCGGCACAGTATGCACCCAACTGCCTTCCTTTTGGAAGGCCTTCCAGTCCCTGGTGAAAGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS TCA 72 bp | TACGTCAGTCCCTTTGGAGTATCCCTAGACCCGCTGTaGGCCGGCAGCTTGTATACCACGAACCAATCCACA | + |
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Preference number: 6 (lower is better) Translates to: YVSPFGVSLDPL*AGSLYTTNQST Trigger: TGTGGATTGGTTCGTGGTATACAAGCTGCCGGCTCACAGCGGGTCTAGGGATACTCCAAAGGGACTGACGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003910.13 ENSMUST00000134569.2 ENSMUST00000145292.8 |
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| CDS GCA 72 bp | AGGCCTTCCAAAAGGAAGGCAGTTGGGTGCATACTGTaGCGCCACCTCGGTGTGTCTCTGCTTTGTTCCTAT | + |
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Preference number: 6 (lower is better) Translates to: RPSKRKAVGCIL*RHLGVSLLCSY Trigger: ATAGGAACAAAGCAGAGACACACCGAGGTGGCGGCACAGTATGCACCCAACTGCCTTCCTTTTGGAAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS CAA 72 bp | ATGCCTGGAGAATTTTGCCAGAACTGGACCTGTAGGTaGGTGCCAAGGGCTTCTGCCAACCATCCGGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: MPGEFCQNWTCR*VPRASANHPEY Trigger: GTACTCCGGATGGTTGGCAGAAGCCCTTGGCACCAACCTACAGGTCCAGTTCTGGCAAAATTCTCCAGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS CCA 72 bp | CCCTCTATACAGGGTTTCCAGTCTTTCACCAGGGACTaGAAGGCCTTCCAAAAGGAAGGCAGTTGGGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: PSIQGFQSFTRD*KAFQKEGSWVH Trigger: ATGCACCCAACTGCCTTCCTTTTGGAAGGCCTTCCAGTCCCTGGTGAAAGACTGGAAACCCTGTATAGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 |
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| CDS CCA 72 bp | ATGTACCCTACACCGTCTTGCCAACCGTCGGAGTTCTaGTCCATGTATTTATACGTCAGTCCCTTTGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: MYPTPSCQPSEF*SMYLYVSPFGV Trigger: TACTCCAAAGGGACTGACGTATAAATACATGGACCAGAACTCCGACGGTTGGCAAGACGGTGTAGGGTACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003910.13 ENSMUST00000109744.8 ENSMUST00000134569.2 ENSMUST00000145292.8 |
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