Pregenerated sensors for DNASE1L3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025279Ensembl transcript IDs: ENSMUST00000026315.8
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTTCTTCAGGTTACACATGGTGCTTGCTTGTGTGCAGACGCCTTTaGGGAGCCCACAGCTGTGTGGAGGGGTTGCTTCTGAGACTGGGA | + |
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Preference number: 1 (lower is better) Translates to: ISSGYTWCLLVCRRL*GAHSCVEGLLLRLG Trigger: TCCCAGTCTCAGAAGCAACCCCTCCACACAGCTGTGGGCTCCCCAAAGGCGTCTGCACACAAGCAAGCACCATGTGTAACCTGAAGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR CCA 90 bp | AACGCTGAGTGGTGGCTGGCATCTATAAGGCTGGCACTCATCCAGTaGGAAGGTGGAAACAGGAGGGTCAGAGTTCAAGGTCATCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: NAEWWLASIRLALIQ*EGGNRRVRVQGHPQ Trigger: CTGAGGATGACCTTGAACTCTGACCCTCCTGTTTCCACCTTCCCACTGGATGAGTGCCAGCCTTATAGATGCCAGCCACCACTCAGCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR GCA 90 bp | TTCCTTGTATATTGGCCTGTGGAGGCCAGAAGAGCCCACCTCATGTaGATGTGGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: FLVYWPVEARRAHLM*MWCVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACGCACCACATGCACATGAGGTGGGCTCTTCTGGCCTCCACAGGCCAATATACAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR CCA 90 bp | TGGGGTTCCTCTCCTAGCCACATCAGCCAGGGAAATTTTGGTGCTTaGGTGCAGAGGTCAGAGGACCCATCTCTCCAGAACTGTCTCATA | + |
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Preference number: 1 (lower is better) Translates to: WGSSPSHISQGNFGA*VQRSEDPSLQNCLI Trigger: TATGAGACAGTTCTGGAGAGATGGGTCCTCTGACCTCTGCACCCAAGCACCAAAATTTCCCTGGCTGATGTGGCTAGGAGAGGAACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR CCA 90 bp | TGTATCTCTAACCTGCCACTGGGCAGAGGCAGAAGAGCATTAGTATaGGTCGAAACTTCAGGGTGTCTGGACCCGTTGACTCCCAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: CISNLPLGRGRRALV*VETSGCLDPLTPKP Trigger: TGGCTTGGGAGTCAACGGGTCCAGACACCCTGAAGTTTCGACCCATACTAATGCTCTTCTGCCTCTGCCCAGTGGCAGGTTAGAGATACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR TCA 90 bp | ACACAAAGTGCTTGCTTAGTCCTGTCTGAGCACTGCATGAAACGCTaGGTGGTGGCTGGCATCTATAAGGCTGGCACTCATCCAGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: TQSACLVLSEHCMKR*VVAGIYKAGTHPVG Trigger: TCCCACTGGATGAGTGCCAGCCTTATAGATGCCAGCCACCACTCAGCGTTTCATGCAGTGCTCAGACAGGACTAAGCAAGCACTTTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR CCA 90 bp | GGTGACAGACACTGTGTGGTCAGTGTTGCACATGGGATATGTGACTaGGGACAGTTAGAACAGGACAGGCATGCAAGGTTGAGCCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: GDRHCVVSVAHGICD*GQLEQDRHARLSPF Trigger: GAAAGGGCTCAACCTTGCATGCCTGTCCTGTTCTAACTGTCCCCAGTCACATATCCCATGTGCAACACTGACCACACAGTGTCTGTCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR CCA 90 bp | AGTTCCCAGAAAAGTCACCAGGTGGCGATAGAAGACCATGTATGCTaGTCTTGGCCCAGACTTTCCCTGTTGGAGCTCAACTTGGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: SSQKSHQVAIEDHVC*SWPRLSLLELNLGS Trigger: GGAACCCAAGTTGAGCTCCAACAGGGAAAGTCTGGGCCAAGACCAGCATACATGGTCTTCTATCGCCACCTGGTGACTTTTCTGGGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR GCA 90 bp | GTTCCTCTCCTAGCCACATCAGCCAGGGAAATTTTGGTGCTTGGGTaGAGAGGTCAGAGGACCCATCTCTCCAGAACTGTCTCATATATG | + |
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Preference number: 1 (lower is better) Translates to: VPLLATSAREILVLG*RGQRTHLSRTVSYM Trigger: CATATATGAGACAGTTCTGGAGAGATGGGTCCTCTGACCTCTGCACCCAAGCACCAAAATTTCCCTGGCTGATGTGGCTAGGAGAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR CCA 90 bp | GTAAGAGGTGGAGCTTGGTTGGAGGTCATGGGAGAGACTGTGTTCTaGAACAGAAACTGGGTTTATGCCTCCCCAACCCCATGTCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: VRGGAWLEVMGETVF*NRNWVYASPTPCLF Trigger: AAAGAGACATGGGGTTGGGGAGGCATAAACCCAGTTTCTGTTCCAGAACACAGTCTCTCCCATGACCTCCAACCAAGCTCCACCTCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR TCA 90 bp | GGCAGGACAGCACAGTGGAAGTGTCCTTCACTCTTCTTCCACGCATaGCCCCAGGCAACTGAGTTTCATTGCCTCCATCATAAAGTATCA | + |
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Preference number: 1 (lower is better) Translates to: GRTAQWKCPSLFFHA*PQATEFHCLHHKVS Trigger: TGATACTTTATGATGGAGGCAATGAAACTCAGTTGCCTGGGGTCATGCGTGGAAGAAGAGTGAAGGACACTTCCACTGTGCTGTCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR CCA 90 bp | ATCAGGATGCTGTTGGGAGATGGAACACTTGTAAGAGGTGGAGCTTaGTTGGAGGTCATGGGAGAGACTGTGTTCTGGAACAGAAACTGG | + |
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Preference number: 1 (lower is better) Translates to: IRMLLGDGTLVRGGA*LEVMGETVFWNRNW Trigger: CCAGTTTCTGTTCCAGAACACAGTCTCTCCCATGACCTCCAACCAAGCTCCACCTCTTACAAGTGTTCCATCTCCCAACAGCATCCTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR GCA 90 bp | GTCGGGCCAGACGGGTCACTGTTCTCCACTGTTCCTAAGTACAGGTaGTCATGTGCAAGAGTAAAGAATATCCAGGAAAACAAAGCGAAA | + |
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Preference number: 1 (lower is better) Translates to: VGPDGSLFSTVPKYR*SCARVKNIQENKAK Trigger: TTTCGCTTTGTTTTCCTGGATATTCTTTACTCTTGCACATGAGCACCTGTACTTAGGAACAGTGGAGAACAGTGACCCGTCTGGCCCGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR GCA 90 bp | GGAGGTCATGGGAGAGACTGTGTTCTGGAACAGAAACTGGGTTTATaGCTCCCCAACCCCATGTCTCTTTATTTAATGTGTATGAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: GGHGRDCVLEQKLGL*LPNPMSLYLMCMSA Trigger: GGCACTCATACACATTAAATAAAGAGACATGGGGTTGGGGAGGCATAAACCCAGTTTCTGTTCCAGAACACAGTCTCTCCCATGACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR CCA 90 bp | GAATGGCGTGATGGACTTGACCCTTTCCTTCCATCGTGCCCATTCTaGAGATCAAATTCAAGTTGCCAGAGTTGTCAGCGAAGGTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: EWRDGLDPFLPSCPF*RSNSSCQSCQRRSL Trigger: TAAAGACCTTCGCTGACAACTCTGGCAACTTGAATTTGATCTCCAGAATGGGCACGATGGAAGGAAAGGGTCAAGTCCATCACGCCATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR TCA 90 bp | AAGGGAGAAAGGGAGGGAAGACACTGTTGGAGCATGCATCCAAAGTaGGGCTGGCTGTCAGATAATGAAAACCTTCATATATCCGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: KGEREGRHCWSMHPK*GWLSDNENLHISED Trigger: GTCTTCGGATATATGAAGGTTTTCATTATCTGACAGCCAGCCTCACTTTGGATGCATGCTCCAACAGTGTCTTCCCTCCCTTTCTCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR TCA 90 bp | AGGAAGAGTGAAAATAACTCCTCTGTCTGTCTGAGTTTGGCAGAGTaGCAGCTTGCAGAGACCCTCATTTGTATCTCTAACCTGCCACTG | + |
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Preference number: 1 (lower is better) Translates to: RKSENNSSVCLSLAE*QLAETLICISNLPL Trigger: CAGTGGCAGGTTAGAGATACAAATGAGGGTCTCTGCAAGCTGTCACTCTGCCAAACTCAGACAGACAGAGGAGTTATTTTCACTCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTTCTACCACACACTCTTTTTCACTaGCCCAGAAACAACAGAGTCAAGGGCCATAAATTGAAACTTCTG | + |
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Preference number: 1 (lower is better) Translates to: CVCVCVCVLPHTLFH*PRNNRVKGHKLKLL Trigger: CAGAAGTTTCAATTTATGGCCCTTGACTCTGTTGTTTCTGGGTCAGTGAAAAAGAGTGTGTGGTAGAACACACACACACACACACACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGCTGGCAAAGGCAATTAGGTATCCTGTTAGGACTCTCCTGGGCCCTAGCGAGTCCCAAGCCCATTaGCTGGGACCTGGGGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: ALLAKAIRYPVRTLLGPSESQAH*LGPGVP Trigger: AGGAACCCCAGGTCCCAGGCAATGGGCTTGGGACTC...GCTAGGGCCCAGGAGAGTCCTAACAGGATACCTAATTGCCTTTGCCAGCAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGCTGGCAAAGGCAATTAGGTATCCTGTTAGGACTCTCCTGGGCCCTAGCCCATTGCCTGGGACCTaGGGTTCCTCTCCTAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: ALLAKAIRYPVRTLLGPSPLPGT*GSSPSH Trigger: GTGGCTAGGAGAGGAACCCCAGGTCCCAGGCAATGG...GCTAGGGCCCAGGAGAGTCCTAACAGGATACCTAATTGCCTTTGCCAGCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAAAGTCTCAACAGCTTTGCCATCTTCCCCGAAAGACTACGTCATCGCCAGAGGTAGGGGTGGGCTGTaGGTAGGGACGGGCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: SKVSTALPSSPKDYVIARGRGGL*VGTGRT Trigger: TGTCCTGCCCGTCCCTACTCACAGCCCACCCCTACC...TCTGGCGATGACGTAGTCTTTCGGGGAAGATGGCAAAGCTGTTGAGACTTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR CAA 90 bp | ATGCACAAAAACGGGTGCCCTGCATACAAGCAAGATGGCGCCACATaGCAGATTCCAGGAGTGGCAGGAAGGGAGCAAACACTCAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: MHKNGCPAYKQDGAT*QIPGVAGREQTLRS Trigger: GGACCTGAGTGTTTGCTCCCTTCCTGCCACTCCTGGAATCTGCAATGTGGCGCCATCTTGCTTGTATGCAGGGCACCCGTTTTTGTGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCTGCTGGCAAAGGCAATTAGGTATCCTGTTAGGACTCTCCTGGGCCCTAGCACTCCTCTGTCTGTCTaGGTTTGGCAGAGTGACAGC | + |
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Preference number: 2 (lower is better) Translates to: ALLAKAIRYPVRTLLGPSTPLSV*VWQSDS Trigger: GCTGTCACTCTGCCAAACTCAGACAGACAGAGGAGT...GCTAGGGCCCAGGAGAGTCCTAACAGGATACCTAATTGCCTTTGCCAGCAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAGTTGCCAGAGTTGTCAGCGAAGGTCTTTACCCTCTGAGCCATCCCACTGCGCTAGGGGTGAGGTGTaGATAGGAGTGAGGTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: SSCQSCQRRSLPSEPSHCARGEV*IGVRCG Trigger: TCCACACCTCACTCCTATCCACACCTCACCCCTAGC...GCAGTGGGATGGCTCAGAGGGTAAAGACCTTCGCTGACAACTCTGGCAACTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAGTTGCCAGAGTTGTCAGCGAAGGTCTTTACCCTCTGAGCCATCCCACTGCGGCAGGACAGCACAGTaGAAGTGTCCTTCACTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SSCQSCQRRSLPSEPSHCGRTAQ*KCPSLF Trigger: GAAGAGTGAAGGACACTTCCACTGTGCTGTCCTGCC...GCAGTGGGATGGCTCAGAGGGTAAAGACCTTCGCTGACAACTCTGGCAACTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGCTGGCAAAGGCAATTAGGTATCCTGTTAGGACTCTCCTGGGCCCTAGCTTCTGGAACAGAAACTaGGTTTATGCCTCCCCAACC | + |
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Preference number: 2 (lower is better) Translates to: ALLAKAIRYPVRTLLGPSFWNRN*VYASPT Trigger: GGTTGGGGAGGCATAAACCCAGTTTCTGTTCCAGAA...GCTAGGGCCCAGGAGAGTCCTAACAGGATACCTAATTGCCTTTGCCAGCAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCCTGTTGGAGCTCAACTTGGGTTCCCTCACCCGAGTTAGAGGATGCTCACTTGGTTGGAGGTCATaGGAGAGACTGTGTTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LSLLELNLGSLTRVRGCSLGWRS*ERLCSG Trigger: TCCAGAACACAGTCTCTCCCATGACCTCCAACCAAG...TGAGCATCCTCTAACTCGGGTGAGGGAACCCAAGTTGAGCTCCAACAGGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR CCA 90 bp | CAATTAGGTATCCTGTTAGGACTCTCCTGGGCCCTAGCTGGACTTCCATTCCTAGAGGTGGAGCTTGGTTaGAGGTCATGGGAGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: QLGILLGLSWALAGLPFLEVELG*RSWERL Trigger: CAGTCTCTCCCATGACCTCCAACCAAGCTCCACCTC...TAGGAATGGAAGTCCAGCTAGGGCCCAGGAGAGTCCTAACAGGATACCTAATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCCTGTTGGAGCTCAACTTGGGTTCCCTCACCCGAGTTAGAGGATGCTCAAGCATGCATCCAAAGTaGGGCTGGCTGTCAGATAAT | + |
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Preference number: 2 (lower is better) Translates to: LSLLELNLGSLTRVRGCSSMHPK*GWLSDN Trigger: ATTATCTGACAGCCAGCCTCACTTTGGATGCATGCT...TGAGCATCCTCTAACTCGGGTGAGGGAACCCAAGTTGAGCTCCAACAGGGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR TCA 90 bp | AGACTTTGTATTTCTTCAGGTTACACATGGTGCTTGCTTGTGTGCAGACGCCTTACAGGCATGCAAGGTTaGGCCCTTTCAGGGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: RLCISSGYTWCLLVCRRLTGMQG*ALSGRG Trigger: GCCCCTCCCTGAAAGGGCTCAACCTTGCATGCCTGT...AAGGCGTCTGCACACAAGCAAGCACCATGTGTAACCTGAAGAAATACAAAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGCGAAATGCACAAAAACGGGTGCCCTGCATACAAGCAAGATGGCGCCACATGACACTGTTGGAGCATaGATCCAAAGTGAGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: KAKCTKTGALHTSKMAPHDTVGA*IQSEAG Trigger: GCCAGCCTCACTTTGGATGCATGCTCCAACAGTGTC...ATGTGGCGCCATCTTGCTTGTATGCAGGGCACCCGTTTTTGTGCATTTCGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCCAACCCCATGTCTCTTTATTTAATGTGTATGAGTGCCTTTCTTCCTTGCGCTGTGAGCACAGGTaGGCTGTAGCTAGGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: PPQPHVSLFNVYECLSSLRCEHR*AVARGE Trigger: CTCACCCCTAGCTACAGCCCACCTGTGCTCACAGCG...CAAGGAAGAAAGGCACTCATACACATTAAATAAAGAGACATGGGGTTGGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAAAGTCTCAACAGCTTTGCCATCTTCCCCGAAAGACTACGTCATCGCCAGATGCAGATTCCAGGAGTaGCAGGAAGGGAGCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: SKVSTALPSSPKDYVIARCRFQE*QEGSKH Trigger: GTGTTTGCTCCCTTCCTGCCACTCCTGGAATCTGCA...TCTGGCGATGACGTAGTCTTTCGGGGAAGATGGCAAAGCTGTTGAGACTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR CAA 90 bp | AGGATGCTGTTGGGAGATGGAACACTTGTAAGAGGTGGAGCTTGGTaGGAGGTCATGGGAGAGACTGTGTTCTGGAACAGAAACTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: RMLLGDGTLVRGGAW*EVMGETVFWNRNWV Trigger: AACCCAGTTTCTGTTCCAGAACACAGTCTCTCCCATGACCTCCAACCAAGCTCCACCTCTTACAAGTGTTCCATCTCCCAACAGCATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR CAA 90 bp | GATCAGGATGCTGTTGGGAGATGGAACACTTGTAAGAGGTGGAGCTaGGTTGGAGGTCATGGGAGAGACTGTGTTCTGGAACAGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: DQDAVGRWNTCKRWS*VGGHGRDCVLEQKL Trigger: CAGTTTCTGTTCCAGAACACAGTCTCTCCCATGACCTCCAACCAAGCTCCACCTCTTACAAGTGTTCCATCTCCCAACAGCATCCTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCCTGTTGGAGCTCAACTTGGGTTCCCTCACCCGAGTTAGAGGATGCTCAAGTAAACGTCAGCTCTaGGCTCTGTATTCTCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: LSLLELNLGSLTRVRGCSSKRQL*ALYSLA Trigger: AGCTAGAGAATACAGAGCCCAGAGCTGACGTTTACT...TGAGCATCCTCTAACTCGGGTGAGGGAACCCAAGTTGAGCTCCAACAGGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCCAACCCCATGTCTCTTTATTTAATGTGTATGAGTGCCTTTCTTCCTTGGAGCTCAGGACATGCTaGTGGCTTAAGCACAGCGCT | + |
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Preference number: 2 (lower is better) Translates to: PPQPHVSLFNVYECLSSLELRTC*WLKHSA Trigger: AGCGCTGTGCTTAAGCCATCAGCATGTCCTGAGCTC...CAAGGAAGAAAGGCACTCATACACATTAAATAAAGAGACATGGGGTTGGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR TCA 90 bp | CAATTAGGTATCCTGTTAGGACTCTCCTGGGCCCTAGCTGGACTTCCATTCCTATGCACATGGGATATGTaGCTGGGGACAGTTAGAACA | + |
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Preference number: 2 (lower is better) Translates to: QLGILLGLSWALAGLPFLCTWDM*LGTVRT Trigger: TGTTCTAACTGTCCCCAGTCACATATCCCATGTGCA...TAGGAATGGAAGTCCAGCTAGGGCCCAGGAGAGTCCTAACAGGATACCTAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR TCA 90 bp | CTATATTTGATTTTGGCTCTGCTGGCAAAGGCAATTAGGTATCCTGTTAGGACTCAGTGCTGGCCGTGGTaGCAGACACTGTGTGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LYLILALLAKAIRYPVRTQCWPW*QTLCGQ Trigger: CTGACCACACAGTGTCTGTCACCACGGCCAGCACTG...AGTCCTAACAGGATACCTAATTGCCTTTGCCAGCAGAGCCAAAATCAAATATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR TCA 90 bp | CTTAATCAGAAGTTCCCAGAAAAGTCACCAGGTGGCGATAGAAGACCATGTATGCTGAGTTTGGCAGAGTaGCAGCTTGCAGAGACCCTC | + |
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Preference number: 2 (lower is better) Translates to: LNQKFPEKSPGGDRRPCMLSLAE*QLAETL Trigger: GAGGGTCTCTGCAAGCTGTCACTCTGCCAAACTCAG...CATACATGGTCTTCTATCGCCACCTGGTGACTTTTCTGGGAACTTCTGATTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR GCA 90 bp | CAATTAGGTATCCTGTTAGGACTCTCCTGGGCCCTAGCTGGACTTCCATTCCTACACACACAAAGTGCTTaGTTAGTCCTGTCTGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: QLGILLGLSWALAGLPFLHTQSA*LVLSEH Trigger: GTGCTCAGACAGGACTAAGCAAGCACTTTGTGTGTG...TAGGAATGGAAGTCCAGCTAGGGCCCAGGAGAGTCCTAACAGGATACCTAATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR CCA 90 bp | CAATTAGGTATCCTGTTAGGACTCTCCTGGGCCCTAGCTGGACTTCCATTCCTACATGGGATATGTGACTaGGGACAGTTAGAACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: QLGILLGLSWALAGLPFLHGICD*GQLEQD Trigger: GTCCTGTTCTAACTGTCCCCAGTCACATATCCCATG...TAGGAATGGAAGTCCAGCTAGGGCCCAGGAGAGTCCTAACAGGATACCTAATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR TCA 90 bp | GACTTGCTGATATACCAGATCAGGATGCTGTTGGGAGATGGAACACTTGTAAGACTCTTCTTCCACGCATaGCCCCAGGCAACTGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: DLLIYQIRMLLGDGTLVRLFFHA*PQATEF Trigger: AAACTCAGTTGCCTGGGGTCATGCGTGGAAGAAGAG...TCTTACAAGTGTTCCATCTCCCAACAGCATCCTGATCTGGTATATCAGCAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR CAA 90 bp | GGTTCACATAGAAAAGACTTGCTGATATACCAGATCAGGATGCTGTaGGGAGATGGAACACTTGTAAGAGGTGGAGCTTGGTTGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: GSHRKDLLIYQIRML*GDGTLVRGGAWLEV Trigger: GACCTCCAACCAAGCTCCACCTCTTACAAGTGTTCCATCTCCCAACAGCATCCTGATCTGGTATATCAGCAAGTCTTTTCTATGTGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR CAA 90 bp | GGATGCTCAGGAGAACATGACCTTTGGAGGCACACAGACCTATATTaGATTTTGGCTCTGCTGGCAAAGGCAATTAGGTATCCTGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: GCSGEHDLWRHTDLY*ILALLAKAIRYPVR Trigger: CCTAACAGGATACCTAATTGCCTTTGCCAGCAGAGCCAAAATCAAATATAGGTCTGTGTGCCTCCAAAGGTCATGTTCTCCTGAGCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| 3UTR-3UTR GCA 90 bp | GACTTTCCCTGTTGGAGCTCAACTTGGGTTCCCTCACCCGAGTTAGAGGATGCTGCAACTGAGTTTCATTaGCTCCATCATAAAGTATCA | + |
|
Preference number: 2 (lower is better) Translates to: DFPCWSSTWVPSPELEDAATEFH*LHHKVS Trigger: TGATACTTTATGATGGAGGCAATGAAACTCAGTTGC...AGCATCCTCTAACTCGGGTGAGGGAACCCAAGTTGAGCTCCAACAGGGAAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCATAGTTACAGTGTAATAGACTTTGTATTTCTTCAGGTTACACATGGTGCTGATAGGAGTGAGGTGTaGGTAGGGGTGGGCTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PHSYSVIDFVFLQVTHGADRSEV*VGVGCE Trigger: CTCACAGCCCACCCCTACCCACACCTCACTCCTATC...AGCACCATGTGTAACCTGAAGAAATACAAAGTCTATTACACTGTAACTATGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTCCCCAACCCCATGTCTCTTTATTTAATGTGTATGAGTGCCTTTCTTCCTTGCATATATCCGAAGACTaGGCTCAGGACATGCTGATG | + |
|
Preference number: 2 (lower is better) Translates to: PPQPHVSLFNVYECLSSLHISED*AQDMLM Trigger: CATCAGCATGTCCTGAGCTCAGTCTTCGGATATATG...CAAGGAAGAAAGGCACTCATACACATTAAATAAAGAGACATGGGGTTGGGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTAATCAGAAGTTCCCAGAAAAGTCACCAGGTGGCGATAGAAGACCATGTATGCACACTCTTTTTCACTaGCCCAGAAACAACAGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LNQKFPEKSPGGDRRPCMHTLFH*PRNNRV Trigger: GACTCTGTTGTTTCTGGGTCAGTGAAAAAGAGTGTG...CATACATGGTCTTCTATCGCCACCTGGTGACTTTTCTGGGAACTTCTGATTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR GCA 90 bp | CTATATTTGATTTTGGCTCTGCTGGCAAAGGCAATTAGGTATCCTGTTAGGACTATTTTGGTGCTTGGGTaGAGAGGTCAGAGGACCCAT | + |
|
Preference number: 2 (lower is better) Translates to: LYLILALLAKAIRYPVRTILVLG*RGQRTH Trigger: ATGGGTCCTCTGACCTCTGCACCCAAGCACCAAAAT...AGTCCTAACAGGATACCTAATTGCCTTTGCCAGCAGAGCCAAAATCAAATATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAGTCACACAGTTCCCAGTGTGTTAAGGAACAACTCGACCCCATAGTTACATCTTCAGGTTACACATaGTGCTTGCTTGTGTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SKSHSSQCVKEQLDPIVTSSGYT*CLLVCR Trigger: TCTGCACACAAGCAAGCACCATGTGTAACCTGAAGA...TGTAACTATGGGGTCGAGTTGTTCCTTAACACACTGGGAACTGTGTGACTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCCCAACCCCATGTCTCTTTATTTAATGTGTATGAGTGCCTTTCTTCCTTGACAATGAAAGCAGCTTaGCCAGTCTTAATTCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PPQPHVSLFNVYECLSSLTMKAA*PVLIPE Trigger: CTCAGGAATTAAGACTGGCCAAGCTGCTTTCATTGT...CAAGGAAGAAAGGCACTCATACACATTAAATAAAGAGACATGGGGTTGGGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 90 bp | CATCTCTCCAGAACTGTCTCATATATGAGTAGCATACTTTACCATTaGGGGACTGTAAGGTTTCTAGGTATGGTGAACTCCTCCAAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: HLSRTVSYMSSILYH*GTVRFLGMVNSSKV Trigger: GACTTTGGAGGAGTTCACCATACCTAGAAACCTTACAGTCCCCAAATGGTAAAGTATGCTACTCATATATGAGACAGTTCTGGAGAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTGGGAAAGTTGTTTGACTTCTCAACTACAGAATGTGAATAACATCAGACATTCTCTAACCTGCCACTaGGCAGAGGCAGAAGAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: SWESCLTSQLQNVNNIRHSLTCH*AEAEEH Trigger: ATGCTCTTCTGCCTCTGCCCAGTGGCAGGTTAGAGA...ATGTCTGATGTTATTCACATTCTGTAGTTGAGAAGTCAAACAACTTTCCCAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGTGCTCATGTGCAAGAGTAAAGAATATCCAGGAAAACAAAGCGAAATGCACCCAAATCTGTCCTGTTaGCTAAATAGTGGCAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: QVLMCKSKEYPGKQSEMHPNLSC*LNSGNV Trigger: AACATTGCCACTATTTAGGCAACAGGACAGATTTGG...GTGCATTTCGCTTTGTTTTCCTGGATATTCTTTACTCTTGCACATGAGCACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCATAGTTACAGTGTAATAGACTTTGTATTTCTTCAGGTTACACATGGTGCTACTCTCCTCCCAGCTTaGTTCCAGGCAAAATTAACT | + |
|
Preference number: 2 (lower is better) Translates to: PHSYSVIDFVFLQVTHGATLLPA*FQAKLT Trigger: AGTTAATTTTGCCTGGAACCAAGCTGGGAGGAGAGT...AGCACCATGTGTAACCTGAAGAAATACAAAGTCTATTACACTGTAACTATGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR TCA 90 bp | CTATATTTGATTTTGGCTCTGCTGGCAAAGGCAATTAGGTATCCTGTTAGGACTCTTGGGAAAGTTGTTTaGCTTCTCAACTACAGAATG | + |
|
Preference number: 2 (lower is better) Translates to: LYLILALLAKAIRYPVRTLGKVV*LLNYRM Trigger: CATTCTGTAGTTGAGAAGTCAAACAACTTTCCCAAG...AGTCCTAACAGGATACCTAATTGCCTTTGCCAGCAGAGCCAAAATCAAATATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTAATCAGAAGTTCCCAGAAAAGTCACCAGGTGGCGATAGAAGACCATGTATGCAGAATTCCATGAGATaGTTAAGGCTACAACTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LNQKFPEKSPGGDRRPCMQNSMR*LRLQLF Trigger: AAAAAGTTGTAGCCTTAACCATCTCATGGAATTCTG...CATACATGGTCTTCTATCGCCACCTGGTGACTTTTCTGGGAACTTCTGATTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR TCA 72 bp | GGCTTGTGCTGGGGCGAGCTGCAGTGCTGGCCGTGGTaGCAGACACTGTGTGGTCAGTGTTGCACATGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GLCWGELQCWPW*QTLCGQCCTWD Trigger: ATCCCATGTGCAACACTGACCACACAGTGTCTGTCACCACGGCCAGCACTGCAGCTCGCCCCAGCACAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR TCA 72 bp | TTTGGGGAGCCCACAGCTGTGTGGAGGGGTTGCTTCTaGGACTGGGAGTCGGGCCAGACGGGTCACTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FGEPTAVWRGCF*DWESGQTGHCS Trigger: AGAACAGTGACCCGTCTGGCCCGACTCCCAGTCTCAGAAGCAACCCCTCCACACAGCTGTGGGCTCCCCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR GCA 72 bp | CCTCCCCATCTCCCTGTTAGTGAGTCCCAAGCCCATTaGCTGGGACCTGGGGTTCCTCTCCTAGCCACATCA | + |
|
Preference number: 3 (lower is better) Translates to: PPHLPVSESQAH*LGPGVPLLATS Trigger: TGATGTGGCTAGGAGAGGAACCCCAGGTCCCAGGCAATGGGCTTGGGACTCACTAACAGGGAGATGGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | GGGTGTCTGGACCCGTTGACTCCCAAGCCAGAGGCATaGAAAGGGCCTTTTGATGTCCAGTCCACCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GCLDPLTPKPEA*KGPFDVQSTSS Trigger: GGAGGAGGTGGACTGGACATCAAAAGGCCCTTTCCATGCCTCTGGCTTGGGAGTCAACGGGTCCAGACACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | CGAGCTGCAGTGCTGGCCGTGGTGACAGACACTGTGTaGTCAGTGTTGCACATGGGATATGTGACTGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RAAVLAVVTDTV*SVLHMGYVTGD Trigger: GTCCCCAGTCACATATCCCATGTGCAACACTGACCACACAGTGTCTGTCACCACGGCCAGCACTGCAGCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | GGTTACACATGGTGCTTGCTTGTGTGCAGACGCCTTTaGGGAGCCCACAGCTGTGTGGAGGGGTTGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GYTWCLLVCRRL*GAHSCVEGLLL Trigger: CAGAAGCAACCCCTCCACACAGCTGTGGGCTCCCCAAAGGCGTCTGCACACAAGCAAGCACCATGTGTAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | GGTCTTGGCCCAGACTTTCCCTGTTGGAGCTCAACTTaGGTTCCCTCACCCGAGTTAGAGGATGCTCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GLGPDFPCWSST*VPSPELEDAQE Trigger: CTCCTGAGCATCCTCTAACTCGGGTGAGGGAACCCAAGTTGAGCTCCAACAGGGAAAGTCTGGGCCAAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCCCTGTTGGAGCTCAACTTGGGTTCCCTCACCCGAGTTAGAGGATGCTCAAGCTGTGTGGAGGGGTaGCTTCTGAGACTGGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LSLLELNLGSLTRVRGCSSCVEG*LLRLGV Trigger: GACTCCCAGTCTCAGAAGCAACCCCTCCACACAGCT...TGAGCATCCTCTAACTCGGGTGAGGGAACCCAAGTTGAGCTCCAACAGGGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR GCA 72 bp | TATTGGCCTGTGGAGGCCAGAAGAGCCCACCTCATGTaGATGTGGTGCGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: YWPVEARRAHLM*MWCVCVCVCVC Trigger: ACACACACACACACACACACACACGCACCACATGCACATGAGGTGGGCTCTTCTGGCCTCCACAGGCCAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | ACAAGCAAGATGGCGCCACATTGCAGATTCCAGGAGTaGCAGGAAGGGAGCAAACACTCAGGTCCAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TSKMAPHCRFQE*QEGSKHSGPSQ Trigger: CTGGCTTGGACCTGAGTGTTTGCTCCCTTCCTGCCACTCCTGGAATCTGCAATGTGGCGCCATCTTGCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR GCA 72 bp | TGTCAGCGAAGGTCTTTACCCTCTGAGCCATCCCACTaGCCAGGCAACACATTTTTAGGGCACAGCCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CQRRSLPSEPSH*PGNTFLGHSLE Trigger: CTCTAGGCTGTGCCCTAAAAATGTGTTGCCTGGGCAGTGGGATGGCTCAGAGGGTAAAGACCTTCGCTGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | TCTCCTAGCCACATCAGCCAGGGAAATTTTGGTGCTTaGGTGCAGAGGTCAGAGGACCCATCTCTCCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SPSHISQGNFGA*VQRSEDPSLQN Trigger: GTTCTGGAGAGATGGGTCCTCTGACCTCTGCACCCAAGCACCAAAATTTCCCTGGCTGATGTGGCTAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | AACCTGCCACTGGGCAGAGGCAGAAGAGCATTAGTATaGGTCGAAACTTCAGGGTGTCTGGACCCGTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: NLPLGRGRRALV*VETSGCLDPLT Trigger: AGTCAACGGGTCCAGACACCCTGAAGTTTCGACCCATACTAATGCTCTTCTGCCTCTGCCCAGTGGCAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | TGGTGGCTGGCATCTATAAGGCTGGCACTCATCCAGTaGGAAGGTGGAAACAGGAGGGTCAGAGTTCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: WWLASIRLALIQ*EGGNRRVRVQG Trigger: ACCTTGAACTCTGACCCTCCTGTTTCCACCTTCCCACTGGATGAGTGCCAGCCTTATAGATGCCAGCCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | ACCATGTATGCTGGTCTTGGCCCAGACTTTCCCTGTTaGAGCTCAACTTGGGTTCCCTCACCCGAGTTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TMYAGLGPDFPC*SSTWVPSPELE Trigger: CTCTAACTCGGGTGAGGGAACCCAAGTTGAGCTCCAACAGGGAAAGTCTGGGCCAAGACCAGCATACATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | CACCAGGTGGCGATAGAAGACCATGTATGCTGGTCTTaGCCCAGACTTTCCCTGTTGGAGCTCAACTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: HQVAIEDHVCWS*PRLSLLELNLG Trigger: ACCCAAGTTGAGCTCCAACAGGGAAAGTCTGGGCCAAGACCAGCATACATGGTCTTCTATCGCCACCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR TCA 72 bp | GCTTGCTTAGTCCTGTCTGAGCACTGCATGAAACGCTaGGTGGTGGCTGGCATCTATAAGGCTGGCACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: ACLVLSEHCMKR*VVAGIYKAGTH Trigger: ATGAGTGCCAGCCTTATAGATGCCAGCCACCACTCAGCGTTTCATGCAGTGCTCAGACAGGACTAAGCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR GCA 72 bp | TGTATTTCTTCAGGTTACACATGGTGCTTGCTTGTGTaGAGACGCCTTTGGGGAGCCCACAGCTGTGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CISSGYTWCLLV*RRLWGAHSCVE Trigger: CTCCACACAGCTGTGGGCTCCCCAAAGGCGTCTGCACACAAGCAAGCACCATGTGTAACCTGAAGAAATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | AATGCACAAAAACGGGTGCCCTGCATACAAGCAAGATaGCGCCACATTGCAGATTCCAGGAGTGGCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NAQKRVPCIQAR*RHIADSRSGRK Trigger: CTTCCTGCCACTCCTGGAATCTGCAATGTGGCGCCATCTTGCTTGTATGCAGGGCACCCGTTTTTGTGCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | GGCATCTATAAGGCTGGCACTCATCCAGTGGGAAGGTaGAAACAGGAGGGTCAGAGTTCAAGGTCATCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GIYKAGTHPVGR*KQEGQSSRSSS Trigger: TGAGGATGACCTTGAACTCTGACCCTCCTGTTTCCACCTTCCCACTGGATGAGTGCCAGCCTTATAGATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAAGTCTCAACAGCTTTGCCATCTTCCCCGAAAGACTACGTCATCGCCAGAAGAGGTGGAGCTTGGTaGGAGGTCATGGGAGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: SKVSTALPSSPKDYVIARRGGAW*EVMGET Trigger: AGTCTCTCCCATGACCTCCAACCAAGCTCCACCTCT...TCTGGCGATGACGTAGTCTTTCGGGGAAGATGGCAAAGCTGTTGAGACTTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR TCA 72 bp | GCACAGTGGAAGTGTCCTTCACTCTTCTTCCACGCATaGCCCCAGGCAACTGAGTTTCATTGCCTCCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: AQWKCPSLFFHA*PQATEFHCLHH Trigger: ATGATGGAGGCAATGAAACTCAGTTGCCTGGGGTCATGCGTGGAAGAAGAGTGAAGGACACTTCCACTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR TCA 72 bp | CAGACACTGTGTGGTCAGTGTTGCACATGGGATATGTaGCTGGGGACAGTTAGAACAGGACAGGCATGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QTLCGQCCTWDM*LGTVRTGQACK Trigger: CTTGCATGCCTGTCCTGTTCTAACTGTCCCCAGTCACATATCCCATGTGCAACACTGACCACACAGTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR TCA 72 bp | TGTGTAGCACACACAAAGTGCTTGCTTAGTCCTGTCTaGGCACTGCATGAAACGCTGAGTGGTGGCTGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: CVAHTKCLLSPV*ALHETLSGGWH Trigger: ATGCCAGCCACCACTCAGCGTTTCATGCAGTGCTCAGACAGGACTAAGCAAGCACTTTGTGTGTGCTACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | GTGTATGAGTGCCTTTCTTCCTTGTATATTGGCCTGTaGAGGCCAGAAGAGCCCACCTCATGTGCATGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VYECLSSLYIGL*RPEEPTSCACG Trigger: ACCACATGCACATGAGGTGGGCTCTTCTGGCCTCCACAGGCCAATATACAAGGAAGAAAGGCACTCATACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | CTGTTGGGAGATGGAACACTTGTAAGAGGTGGAGCTTaGTTGGAGGTCATGGGAGAGACTGTGTTCTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LLGDGTLVRGGA*LEVMGETVFWN Trigger: GTTCCAGAACACAGTCTCTCCCATGACCTCCAACCAAGCTCCACCTCTTACAAGTGTTCCATCTCCCAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | AAAAGTCACCAGGTGGCGATAGAAGACCATGTATGCTaGTCTTGGCCCAGACTTTCCCTGTTGGAGCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: KSHQVAIEDHVC*SWPRLSLLELN Trigger: GTTGAGCTCCAACAGGGAAAGTCTGGGCCAAGACCAGCATACATGGTCTTCTATCGCCACCTGGTGACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCGAAATGCACAAAAACGGGTGCCCTGCATACAAGCAAGATGGCGCCACATGACTCTCCTCCCAGCTaGGTTCCAGGCAAAATTAAC | + |
|
Preference number: 3 (lower is better) Translates to: KAKCTKTGALHTSKMAPHDSPPS*VPGKIN Trigger: GTTAATTTTGCCTGGAACCAAGCTGGGAGGAGAGTC...ATGTGGCGCCATCTTGCTTGTATGCAGGGCACCCGTTTTTGTGCATTTCGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR GCA 72 bp | GGAAGGGAGAAAGGGAGGGAAGACACTGTTGGAGCATaGATCCAAAGTGAGGCTGGCTGTCAGATAATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GREKGREDTVGA*IQSEAGCQIMK Trigger: TTTCATTATCTGACAGCCAGCCTCACTTTGGATGCATGCTCCAACAGTGTCTTCCCTCCCTTTCTCCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTAATCAGAAGTTCCCAGAAAAGTCACCAGGTGGCGATAGAAGACCATGTATGCCCAGACTTTCCCTGTaGGAGCTCAACTTGGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LNQKFPEKSPGGDRRPCMPRLSL*ELNLGS Trigger: GGAACCCAAGTTGAGCTCCAACAGGGAAAGTCTGGG...CATACATGGTCTTCTATCGCCACCTGGTGACTTTTCTGGGAACTTCTGATTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR TCA 72 bp | CAGTCAGGAAGAGTGAAAATAACTCCTCTGTCTGTCTaGGTTTGGCAGAGTGACAGCTTGCAGAGACCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QSGRVKITPLSV*VWQSDSLQRPS Trigger: TGAGGGTCTCTGCAAGCTGTCACTCTGCCAAACTCAGACAGACAGAGGAGTTATTTTCACTCTTCCTGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR GCA 72 bp | TATCCAGGAAAACAAAGCGAAATGCACAAAAACGGGTaGCCTGCATACAAGCAAGATGGCGCCACATTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: YPGKQSEMHKNG*PAYKQDGATLQ Trigger: CTGCAATGTGGCGCCATCTTGCTTGTATGCAGGGCACCCGTTTTTGTGCATTTCGCTTTGTTTTCCTGGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR GCA 72 bp | ATAGACTTTGTATTTCTTCAGGTTACACATGGTGCTTaGTTGTGTGCAGACGCCTTTGGGGAGCCCACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: IDFVFLQVTHGA*LCADAFGEPTA Trigger: AGCTGTGGGCTCCCCAAAGGCGTCTGCACACAAGCAAGCACCATGTGTAACCTGAAGAAATACAAAGTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR GCA 72 bp | AAATTATTGTGTTCCCCAGTACACACCCAGAACCTGTaGCTACCTGTGTCTAGTAAACGTCAGCTCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KLLCSPVHTQNL*LPVSSKRQLWA Trigger: AGCCCAGAGCTGACGTTTACTAGACACAGGTAGGCACAGGTTCTGGGTGTGTACTGGGGAACACAATAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | GAGGTCATGGGAGAGACTGTGTTCTGGAACAGAAACTaGGTTTATGCCTCCCCAACCCCATGTCTCTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: EVMGETVFWNRN*VYASPTPCLFI Trigger: AATAAAGAGACATGGGGTTGGGGAGGCATAAACCCAGTTTCTGTTCCAGAACACAGTCTCTCCCATGACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | GATGGACTTGACCCTTTCCTTCCATCGTGCCCATTCTaGAGATCAAATTCAAGTTGCCAGAGTTGTCAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: DGLDPFLPSCPF*RSNSSCQSCQR Trigger: TCGCTGACAACTCTGGCAACTTGAATTTGATCTCCAGAATGGGCACGATGGAAGGAAAGGGTCAAGTCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR TCA 72 bp | ACTGACCCAGAAACAACAGAGTCAAGGGCCATAAATTaGAACTTCTGGAAGCACAAGTCAAAACCCAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TDPETTESRAIN*NFWKHKSKPSP Trigger: GGGGCTGGGTTTTGACTTGTGCTTCCAGAAGTTTCAATTTATGGCCCTTGACTCTGTTGTTTCTGGGTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR TCA 72 bp | CAGACTCTTGAGAGCTGCCATGTGGGTGCTAGGAATTaGACCTTAATCAGAAGTTCCCAGAAAAGTCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: QTLESCHVGARN*TLIRSSQKSHQ Trigger: CTGGTGACTTTTCTGGGAACTTCTGATTAAGGTTCAATTCCTAGCACCCACATGGCAGCTCTCAAGAGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR GCA 72 bp | TGTAATAGACTTTGTATTTCTTCAGGTTACACATGGTaGTTGCTTGTGTGCAGACGCCTTTGGGGAGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: CNRLCISSGYTW*LLVCRRLWGAH Trigger: GTGGGCTCCCCAAAGGCGTCTGCACACAAGCAAGCACCATGTGTAACCTGAAGAAATACAAAGTCTATTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | CAGTGTAATAGACTTTGTATTTCTTCAGGTTACACATaGTGCTTGCTTGTGTGCAGACGCCTTTGGGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QCNRLCISSGYT*CLLVCRRLWGA Trigger: GGCTCCCCAAAGGCGTCTGCACACAAGCAAGCACCATGTGTAACCTGAAGAAATACAAAGTCTATTACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR CAA 90 bp | CTATATTTGATTTTGGCTCTGCTGGCAAAGGCAATTAGGTATCCTGTTAGGACTGGAGGGAAGACACTGTaGGAGCATGCATCCAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LYLILALLAKAIRYPVRTGGKTL*EHASKV Trigger: CACTTTGGATGCATGCTCCAACAGTGTCTTCCCTCC...AGTCCTAACAGGATACCTAATTGCCTTTGCCAGCAGAGCCAAAATCAAATATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR TCA 72 bp | AGGGAGGGAAGACACTGTTGGAGCATGCATCCAAAGTaGGGCTGGCTGTCAGATAATGAAAACCTTCATATA | + |
|
Preference number: 3 (lower is better) Translates to: REGRHCWSMHPK*GWLSDNENLHI Trigger: TATATGAAGGTTTTCATTATCTGACAGCCAGCCTCACTTTGGATGCATGCTCCAACAGTGTCTTCCCTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR GCA 72 bp | CCCCAACCCCATGTCTCTTTATTTAATGTGTATGAGTaGCTTTCTTCCTTGTATATTGGCCTGTGGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PQPHVSLFNVYE*LSSLYIGLWRP Trigger: TGGCCTCCACAGGCCAATATACAAGGAAGAAAGGCACTCATACACATTAAATAAAGAGACATGGGGTTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR GCA 72 bp | GGGAGAGACTGTGTTCTGGAACAGAAACTGGGTTTATaGCTCCCCAACCCCATGTCTCTTTATTTAATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GRDCVLEQKLGL*LPNPMSLYLMC Trigger: ACACATTAAATAAAGAGACATGGGGTTGGGGAGGCATAAACCCAGTTTCTGTTCCAGAACACAGTCTCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATTAGGTATCCTGTTAGGACTCTCCTGGGCCCTAGCTGGACTTCCATTCCTATCTTGGGAAAGTTGTTaGACTTCTCAACTACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: QLGILLGLSWALAGLPFLSWESC*TSQLQN Trigger: ATTCTGTAGTTGAGAAGTCAAACAACTTTCCCAAGA...TAGGAATGGAAGTCCAGCTAGGGCCCAGGAGAGTCCTAACAGGATACCTAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR TCA 72 bp | GAAAATAACTCCTCTGTCTGTCTGAGTTTGGCAGAGTaGCAGCTTGCAGAGACCCTCATTTGTATCTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: ENNSSVCLSLAE*QLAETLICISN Trigger: GTTAGAGATACAAATGAGGGTCTCTGCAAGCTGTCACTCTGCCAAACTCAGACAGACAGAGGAGTTATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR TCA 72 bp | TTATTTATTGGGGGCATGTTTACATGTGGAGAGATCTaGGAATGGCGTGATGGACTTGACCCTTTCCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LFIGGMFTCGEI*EWRDGLDPFLP Trigger: TGGAAGGAAAGGGTCAAGTCCATCACGCCATTCTCAGATCTCTCCACATGTAAACATGCCCCCAATAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR TCA 72 bp | GAGAACATGACCTTTGGAGGCACACAGACCTATATTTaGTTTTGGCTCTGCTGGCAAAGGCAATTAGGTATC | + |
|
Preference number: 3 (lower is better) Translates to: ENMTFGGTQTYI*FWLCWQRQLGI Trigger: GATACCTAATTGCCTTTGCCAGCAGAGCCAAAATCAAATATAGGTCTGTGTGCCTCCAAAGGTCATGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CCA 72 bp | ATTAGGTATCCTGTTAGGACTCTCCTGGGCCCTAGCTaGACTTCCATTCCTAGGTTCATTCCTTTATCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: IRYPVRTLLGPS*TSIPRFIPLSK Trigger: TTTTGATAAAGGAATGAACCTAGGAATGGAAGTCCAGCTAGGGCCCAGGAGAGTCCTAACAGGATACCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR TCA 72 bp | CCGGGCATTATCTCCTCCAACTTAACCGGGCACTTTTaGTTTTATTCCCTTGGCAAGATGGTATATAATCCT | + |
|
Preference number: 3 (lower is better) Translates to: PGIISSNLTGHF*FYSLGKMVYNP Trigger: AGGATTATATACCATCTTGCCAAGGGAATAAAATCAAAAGTGCCCGGTTAAGTTGGAGGAGATAATGCCCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 72 bp | GGGGTTCCTCTCCTAGCCACATCAGCCAGGGAAATTTaGGTGCTTGGGTGCAGAGGTCAGAGGACCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVPLLATSAREI*VLGCRGQRTHL Trigger: GAGATGGGTCCTCTGACCTCTGCACCCAAGCACCAAAATTTCCCTGGCTGATGTGGCTAGGAGAGGAACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CCA 90 bp | GACTTTCCCTGTTGGAGCTCAACTTGGGTTCCCTCACCCGAGTTAGAGGATGCTAGGGCCAGGGTGTCATaGAGGGCAAGGATGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DFPCWSSTWVPSPELEDARARVS*RARMKS Trigger: GCTCTTCATCCTTGCCCTCCATGACACCCTGGCCCT...AGCATCCTCTAACTCGGGTGAGGGAACCCAAGTTGAGCTCCAACAGGGAAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGTTGCCAGAGTTGTCAGCGAAGGTCTTTACCCTCTGAGCCATCCCACTGCTCTGCCAGGCCTTCTTaGGGACATAGCTACAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCQSCQRRSLPSEPSHCSARPS*GHSYSR Trigger: CCGGCTGTAGCTATGTCCCCAAGAAGGCCTGGCAGA...GCAGTGGGATGGCTCAGAGGGTAAAGACCTTCGCTGACAACTCTGGCAACTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 72 bp | TGGTCTTGGCCCAGACTTTCCCTGTTGGAGCTCAACTaGGGTTCCCTCACCCGAGTTAGAGGATGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WSWPRLSLLELN*GSLTRVRGCSG Trigger: TCCTGAGCATCCTCTAACTCGGGTGAGGGAACCCAAGTTGAGCTCCAACAGGGAAAGTCTGGGCCAAGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCCTGTTGGAGCTCAACTTGGGTTCCCTCACCCGAGTTAGAGGATGCTCACTGGAAAGTGATCACTaGCATCCAGGGCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLLELNLGSLTRVRGCSLESDH*HPGPPP Trigger: AGGAGGAGGCCCTGGATGTCAGTGATCACTTTCCAG...TGAGCATCCTCTAACTCGGGTGAGGGAACCCAAGTTGAGCTCCAACAGGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 72 bp | GACCATGTATGCTGGTCTTGGCCCAGACTTTCCCTGTaGGAGCTCAACTTGGGTTCCCTCACCCGAGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DHVCWSWPRLSL*ELNLGSLTRVR Trigger: TCTAACTCGGGTGAGGGAACCCAAGTTGAGCTCCAACAGGGAAAGTCTGGGCCAAGACCAGCATACATGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 72 bp | TCACCAGGTGGCGATAGAAGACCATGTATGCTGGTCTaGGCCCAGACTTTCCCTGTTGGAGCTCAACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPGGDRRPCMLV*AQTFPVGAQLG Trigger: CCCAAGTTGAGCTCCAACAGGGAAAGTCTGGGCCAAGACCAGCATACATGGTCTTCTATCGCCACCTGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCTGGCAAAGGCAATTAGGTATCCTGTTAGGACTCTCCTGGGCCCTAGCACCGTAGTGTCCTCTTaGTCCCCAATCAGCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ALLAKAIRYPVRTLLGPSTVVSS*SPISQT Trigger: TGTTTGGCTGATTGGGGACCAAGAGGACACTACGGT...GCTAGGGCCCAGGAGAGTCCTAACAGGATACCTAATTGCCTTTGCCAGCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCCTGTTGGAGCTCAACTTGGGTTCCCTCACCCGAGTTAGAGGATGCTCAAACTCAACTGGAAAGTaGTCACTGACATCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLELNLGSLTRVRGCSNSTGK*SLTSRA Trigger: GGCCCTGGATGTCAGTGATCACTTTCCAGTTGAGTT...TGAGCATCCTCTAACTCGGGTGAGGGAACCCAAGTTGAGCTCCAACAGGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR GCA 90 bp | GACTTTCCCTGTTGGAGCTCAACTTGGGTTCCCTCACCCGAGTTAGAGGATGCTCTCAAACGAATGTTCTaGCAGGCCTTCTTGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: DFPCWSSTWVPSPELEDALKRMF*QAFLGT Trigger: TGTCCCCAAGAAGGCCTGGCAGAACATTCGTTTGAG...AGCATCCTCTAACTCGGGTGAGGGAACCCAAGTTGAGCTCCAACAGGGAAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 72 bp | GACTTTGTATTTCTTCAGGTTACACATGGTGCTTGCTaGTGTGCAGACGCCTTTGGGGAGCCCACAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DFVFLQVTHGAC*CADAFGEPTAV Trigger: CACAGCTGTGGGCTCCCCAAAGGCGTCTGCACACAAGCAAGCACCATGTGTAACCTGAAGAAATACAAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 72 bp | GCTGTTGGGAGATGGAACACTTGTAAGAGGTGGAGCTaGGTTGGAGGTCATGGGAGAGACTGTGTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVGRWNTCKRWS*VGGHGRDCVLE Trigger: TTCCAGAACACAGTCTCTCCCATGACCTCCAACCAAGCTCCACCTCTTACAAGTGTTCCATCTCCCAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCTGGCAAAGGCAATTAGGTATCCTGTTAGGACTCTCCTGGGCCCTAGCATATCCATGGCTTCATaGTTTTCCTTCTTGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLAKAIRYPVRTLLGPSISMAS*FSFLLA Trigger: AGCGAGCAAGAAGGAAAACCATGAAGCCATGGATAT...GCTAGGGCCCAGGAGAGTCCTAACAGGATACCTAATTGCCTTTGCCAGCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 72 bp | TTGGGAGATGGAACACTTGTAAGAGGTGGAGCTTGGTaGGAGGTCATGGGAGAGACTGTGTTCTGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGDGTLVRGGAW*EVMGETVFWNR Trigger: TCTGTTCCAGAACACAGTCTCTCCCATGACCTCCAACCAAGCTCCACCTCTTACAAGTGTTCCATCTCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCCTGTTGGAGCTCAACTTGGGTTCCCTCACCCGAGTTAGAGGATGCTCAATTTTCTGTTGTTGGTaGAGGCCCTTGAAGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLLELNLGSLTRVRGCSIFCCW*RPLKTV Trigger: TACAGTCTTCAAGGGCCTTCACCAACAACAGAAAAT...TGAGCATCCTCTAACTCGGGTGAGGGAACCCAAGTTGAGCTCCAACAGGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 72 bp | AATAGACTTTGTATTTCTTCAGGTTACACATGGTGCTaGCTTGTGTGCAGACGCCTTTGGGGAGCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRLCISSGYTWC*LVCRRLWGAHS Trigger: GCTGTGGGCTCCCCAAAGGCGTCTGCACACAAGCAAGCACCATGTGTAACCTGAAGAAATACAAAGTCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 72 bp | CTATGTGAGGGTGTCAGACCTTCAAGTTACAGACTCTaGAGAGCTGCCATGTGGGTGCTAGGAATTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LCEGVRPSSYRL*RAAMWVLGIEP Trigger: AGGTTCAATTCCTAGCACCCACATGGCAGCTCTCAAGAGTCTGTAACTTGAAGGTCTGACACCCTCACATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCCCAACCCCATGTCTCTTTATTTAATGTGTATGAGTGCCTTTCTTCCTTGCAAAGGACCTCACATTaGAGGAGCAGAGCCTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPQPHVSLFNVYECLSSLQRTSH*RSRALG Trigger: CCCTAAGGCTCTGCTCCTTCAATGTGAGGTCCTTTG...CAAGGAAGAAAGGCACTCATACACATTAAATAAAGAGACATGGGGTTGGGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTGCTCATGTGCAAGAGTAAAGAATATCCAGGAAAACAAAGCGAAATGCACGCTTCTCCATCAGCATaGGACAGATGTTGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QVLMCKSKEYPGKQSEMHASPSA*DRCCCC Trigger: GCAGCAACAACATCTGTCCCATGCTGATGGAGAAGC...GTGCATTTCGCTTTGTTTTCCTGGATATTCTTTACTCTTGCACATGAGCACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCAACCCCATGTCTCTTTATTTAATGTGTATGAGTGCCTTTCTTCCTTGTCAGCCAAACAAACTTaGGGTCCGTCCTCAAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPQPHVSLFNVYECLSSLSAKQT*GPSSNE Trigger: TTCGTTTGAGGACGGACCCCAAGTTTGTTTGGCTGA...CAAGGAAGAAAGGCACTCATACACATTAAATAAAGAGACATGGGGTTGGGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 72 bp | TATTTAATGTGTATGAGTGCCTTTCTTCCTTGTATATaGGCCTGTGGAGGCCAGAAGAGCCCACCTCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: YLMCMSAFLPCI*ACGGQKSPPHV Trigger: CACATGAGGTGGGCTCTTCTGGCCTCCACAGGCCAATATACAAGGAAGAAAGGCACTCATACACATTAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 72 bp | GTCTCTTTATTTAATGTGTATGAGTGCCTTTCTTCCTaGTATATTGGCCTGTGGAGGCCAGAAGAGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VSLFNVYECLSS*YIGLWRPEEPT Trigger: GGTGGGCTCTTCTGGCCTCCACAGGCCAATATACAAGGAAGAAAGGCACTCATACACATTAAATAAAGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 72 bp | AGAAAAGACTTGCTGATATACCAGATCAGGATGCTGTaGGGAGATGGAACACTTGTAAGAGGTGGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKDLLIYQIRML*GDGTLVRGGAW Trigger: CCAAGCTCCACCTCTTACAAGTGTTCCATCTCCCAACAGCATCCTGATCTGGTATATCAGCAAGTCTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 72 bp | GGAGAACATGACCTTTGGAGGCACACAGACCTATATTaGATTTTGGCTCTGCTGGCAAAGGCAATTAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GEHDLWRHTDLY*ILALLAKAIRY Trigger: ATACCTAATTGCCTTTGCCAGCAGAGCCAAAATCAAATATAGGTCTGTGTGCCTCCAAAGGTCATGTTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| 3UTR CAA 72 bp | AGAACTGTCTCATATATGAGTAGCATACTTTACCATTaGGGGACTGTAAGGTTTCTAGGTATGGTGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTVSYMSSILYH*GTVRFLGMVNS Trigger: GGAGTTCACCATACCTAGAAACCTTACAGTCCCCAAATGGTAAAGTATGCTACTCATATATGAGACAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCAGTGCTGGCCGTGGTGACAGACACTGTGTGGTCAGTGTTGCACATGGGACAGCTGGTACTCTTCTaGACCGTAGTGTCCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AAVLAVVTDTVWSVLHMGQLVLF*TVVSSW Trigger: CCAAGAGGACACTACGGTCAAGAAGAGTACCAGCTG...TCCCATGTGCAACACTGACCACACAGTGTCTGTCACCACGGCCAGCACTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTGCTGGCAAAGGCAATTAGGTATCCTGTTAGGACTCTCCTGGGCCCTAGCACAATCACGAAGTCCTaGACAGCAGTAAAGGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ALLAKAIRYPVRTLLGPSTITKS*TAVKGE Trigger: TTCCCCCTTTACTGCTGTCAAGGACTTCGTGATTGT...GCTAGGGCCCAGGAGAGTCCTAACAGGATACCTAATTGCCTTTGCCAGCAGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS GCA 90 bp | TCGACCAGCTCATCTATCTCTTTAACGGAGGTCTCGGGAGTTGTGTaGAAGGGGACAATCACGAAGTCCTTGACAGCAGTAAAGGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: STSSSISLTEVSGVV*KGTITKSLTAVKGE Trigger: TTCCCCCTTTACTGCTGTCAAGGACTTCGTGATTGTCCCCTTGCACACAACTCCCGAGACCTCCGTTAAAGAGATAGATGAGCTGGTCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGTCTCAACAGCTTTGCCATCTTCCCCGAAAGACTACGTCATCGCCAGACCAAAGGACCTCACATaGAAGGAGCAGAGCCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKVSTALPSSPKDYVIARPKDLT*KEQSLR Trigger: CCTAAGGCTCTGCTCCTTCAATGTGAGGTCCTTTGG...TCTGGCGATGACGTAGTCTTTCGGGGAAGATGGCAAAGCTGTTGAGACTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCGAAATGCACAAAAACGGGTGCCCTGCATACAAGCAAGATGGCGCCACATCGGGGAACCACGGAGTaGACTATCTCTTGTCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: KAKCTKTGALHTSKMAPHRGTTE*TISCPQ Trigger: TTGTGGACAAGAGATAGTCAACTCCGTGGTTCCCCG...ATGTGGCGCCATCTTGCTTGTATGCAGGGCACCCGTTTTTGTGCATTTCGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS TCA 90 bp | CTTTCTGAAAGTCAAAGACGCCACTGGAACGGGGAACCACGGAGTTaGCTATCTCTTGTCCACAAAGCACAATCCTGTCATAGGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSESQRRHWNGEPRS*LSLVHKAQSCHRHS Trigger: GCTGTGCCTATGACAGGATTGTGCTTTGTGGACAAGAGATAGTCAACTCCGTGGTTCCCCGTTCCAGTGGCGTCTTTGACTTTCAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGTCTCAACAGCTTTGCCATCTTCCCCGAAAGACTACGTCATCGCCAGAATCAGCCAAACAAACTaGGGGTCCGTCCTCAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: SKVSTALPSSPKDYVIARISQTN*GSVLKR Trigger: TCGTTTGAGGACGGACCCCAAGTTTGTTTGGCTGAT...TCTGGCGATGACGTAGTCTTTCGGGGAAGATGGCAAAGCTGTTGAGACTTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CAA 90 bp | TCAAAGTCACACAGTTCCCAGTGTGTTAAGGAACAACTCGACCCCATAGTTACAGACCGTAGTGTCCTCTaGGTCCCCAATCAGCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SKSHSSQCVKEQLDPIVTDRSVL*VPNQPN Trigger: GTTTGGCTGATTGGGGACCAAGAGGACACTACGGTC...TGTAACTATGGGGTCGAGTTGTTCCTTAACACACTGGGAACTGTGTGACTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CAA 90 bp | TGCATACAAGCAAGATGGCGCCACATTGCAGATTCCAGGAGTGGCAGGAAGGGATTGTTGCTGCTGTCCTaGATTTCCATCAACAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: CIQARWRHIADSRSGRKGLLLLS*ISINSI Trigger: TATACTGTTGATGGAAATCAAGGACAGCAGCAACAA...TCCCTTCCTGCCACTCCTGGAATCTGCAATGTGGCGCCATCTTGCTTGTATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CAA 90 bp | GATCAAGGTGATGTAACAGAAGACTCTCCTCCCAGCTTGGTTCCAGGCAAAATTATGGGACAGATGTTGTaGCTGCTGTCCTTGATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DQGDVTEDSPPSLVPGKIMGQML*LLSLIS Trigger: GGAAATCAAGGACAGCAGCAACAACATCTGTCCCAT...AATTTTGCCTGGAACCAAGCTGGGAGGAGAGTCTTCTGTTACATCACCTTGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGTCTCAACAGCTTTGCCATCTTCCCCGAAAGACTACGTCATCGCCAGAAAGGCATACTGCTCTTaGTACGTGTTTCTTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SKVSTALPSSPKDYVIARKAYCS*YVFLPS Trigger: ACTTGGAAGAAACACGTACAAAGAGCAGTATGCCTT...TCTGGCGATGACGTAGTCTTTCGGGGAAGATGGCAAAGCTGTTGAGACTTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS CCA 90 bp | AGGTCACAGCGTTTGATGATCTTCACAATGATATCCATGGCTTCATaGTTTTCCTTCTTGCTCGCTCCAAAGGACCTCACATTGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: RSQRLMIFTMISMAS*FSFLLAPKDLTLKE Trigger: CTCCTTCAATGTGAGGTCCTTTGGAGCGAGCAAGAAGGAAAACCATGAAGCCATGGATATCATTGTGAAGATCATCAAACGCTGTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS-3UTR CAA 90 bp | CCTCCCCAACCCCATGTCTCTTTATTTAATGTGTATGAGTGCCTTTCTTCCTTGAGCATGGGACAGATGTaGTTGCTGCTGTCCTTGATT | + |
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Preference number: 5 (lower is better) Translates to: PPQPHVSLFNVYECLSSLSMGQM*LLLSLI Trigger: AATCAAGGACAGCAGCAACAACATCTGTCCCATGCT...CAAGGAAGAAAGGCACTCATACACATTAAATAAAGAGACATGGGGTTGGGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS-3UTR CAA 90 bp | TCAAAGTCACACAGTTCCCAGTGTGTTAAGGAACAACTCGACCCCATAGTTACACATGGTAGTGGTATTTaGTCTTCACAGACACCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SKSHSSQCVKEQLDPIVTHGSGI*SSQTPA Trigger: AGCTGGTGTCTGTGAAGACAAAATACCACTACCATG...TGTAACTATGGGGTCGAGTTGTTCCTTAACACACTGGGAACTGTGTGACTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS-3UTR CAA 90 bp | GACTTGCTGATATACCAGATCAGGATGCTGTTGGGAGATGGAACACTTGTAAGAGAAACAGATTTTCTGTaGTTGGTGAAGGCCCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: DLLIYQIRMLLGDGTLVRETDFL*LVKALE Trigger: TTCAAGGGCCTTCACCAACAACAGAAAATCTGTTTC...TCTTACAAGTGTTCCATCTCCCAACAGCATCCTGATCTGGTATATCAGCAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS-3UTR CAA 90 bp | CTATATTTGATTTTGGCTCTGCTGGCAAAGGCAATTAGGTATCCTGTTAGGACTACAGATTTTCTGTTGTaGGTGAAGGCCCTTGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: LYLILALLAKAIRYPVRTTDFLL*VKALED Trigger: GTCTTCAAGGGCCTTCACCAACAACAGAAAATCTGT...AGTCCTAACAGGATACCTAATTGCCTTTGCCAGCAGAGCCAAAATCAAATATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS CAA 90 bp | ATGGCTTCATGGTTTTCCTTCTTGCTCGCTCCAAAGGACCTCACATaGAAGGAGCAGAGCCTTAGGGCCAGGGTGTCATGGAGGGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: MASWFSFLLAPKDLT*KEQSLRARVSWRAR Trigger: CCTTGCCCTCCATGACACCCTGGCCCTAAGGCTCTGCTCCTTCAATGTGAGGTCCTTTGGAGCGAGCAAGAAGGAAAACCATGAAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS TCA 72 bp | GGTTTTCCTTCTTGCTCGCTCCAAAGGACCTCACATTaGAGGAGCAGAGCCTTAGGGCCAGGGTGTCATGGA | + |
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Preference number: 6 (lower is better) Translates to: GFPSCSLQRTSH*RSRALGPGCHG Trigger: TCCATGACACCCTGGCCCTAAGGCTCTGCTCCTTCAATGTGAGGTCCTTTGGAGCGAGCAAGAAGGAAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS CAA 72 bp | GTAGTGTCCTCTTGGTCCCCAATCAGCCAAACAAACTaGGGGTCCGTCCTCAAACGAATGTTCTGCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VVSSWSPISQTN*GSVLKRMFCQA Trigger: GGCCTGGCAGAACATTCGTTTGAGGACGGACCCCAAGTTTGTTTGGCTGATTGGGGACCAAGAGGACACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS CAA 72 bp | GGCACAGCTGGTACTCTTCTTGACCGTAGTGTCCTCTaGGTCCCCAATCAGCCAAACAAACTTGGGGTCCGT | + |
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Preference number: 6 (lower is better) Translates to: GTAGTLLDRSVL*VPNQPNKLGVR Trigger: ACGGACCCCAAGTTTGTTTGGCTGATTGGGGACCAAGAGGACACTACGGTCAAGAAGAGTACCAGCTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS CAA 90 bp | TTCTTGACCGTAGTGTCCTCTTGGTCCCCAATCAGCCAAACAAACTaGGGGTCCGTCCTCAAACGAATGTTCTGCCAGGCCTTCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FLTVVSSWSPISQTN*GSVLKRMFCQAFLG Trigger: CCCCAAGAAGGCCTGGCAGAACATTCGTTTGAGGACGGACCCCAAGTTTGTTTGGCTGATTGGGGACCAAGAGGACACTACGGTCAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS CAA 90 bp | CCTGTCATAGGCACAGCTGGTACTCTTCTTGACCGTAGTGTCCTCTaGGTCCCCAATCAGCCAAACAAACTTGGGGTCCGTCCTCAAACG | + |
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Preference number: 6 (lower is better) Translates to: PVIGTAGTLLDRSVL*VPNQPNKLGVRPQT Trigger: CGTTTGAGGACGGACCCCAAGTTTGTTTGGCTGATTGGGGACCAAGAGGACACTACGGTCAAGAAGAGTACCAGCTGTGCCTATGACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS CAA 72 bp | GCCACTGGAACGGGGAACCACGGAGTTGACTATCTCTaGTCCACAAAGCACAATCCTGTCATAGGCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: ATGTGNHGVDYL*STKHNPVIGTA Trigger: AGCTGTGCCTATGACAGGATTGTGCTTTGTGGACAAGAGATAGTCAACTCCGTGGTTCCCCGTTCCAGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS CAA 90 bp | GTCAAAGACGCCACTGGAACGGGGAACCACGGAGTTGACTATCTCTaGTCCACAAAGCACAATCCTGTCATAGGCACAGCTGGTACTCTT | + |
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Preference number: 6 (lower is better) Translates to: VKDATGTGNHGVDYL*STKHNPVIGTAGTL Trigger: AAGAGTACCAGCTGTGCCTATGACAGGATTGTGCTTTGTGGACAAGAGATAGTCAACTCCGTGGTTCCCCGTTCCAGTGGCGTCTTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS TCA 72 bp | AGTCAAAGACGCCACTGGAACGGGGAACCACGGAGTTaGCTATCTCTTGTCCACAAAGCACAATCCTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SQRRHWNGEPRS*LSLVHKAQSCH Trigger: ATGACAGGATTGTGCTTTGTGGACAAGAGATAGTCAACTCCGTGGTTCCCCGTTCCAGTGGCGTCTTTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS TCA 72 bp | GCCCTTGAAGACTGTAGCTTAAACTCAACTGGAAAGTaGTCACTGACATCCAGGGCCTCCTCCTCAGACAAG | + |
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Preference number: 6 (lower is better) Translates to: ALEDCSLNSTGK*SLTSRASSSDK Trigger: CTTGTCTGAGGAGGAGGCCCTGGATGTCAGTGATCACTTTCCAGTTGAGTTTAAGCTACAGTCTTCAAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS CCA 72 bp | ACAATCACGAAGTCCTTGACAGCAGTAAAGGGGGAATaGAACCAAACCACAAAGGGCTCCCTGGAAAACACG | + |
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Preference number: 6 (lower is better) Translates to: TITKSLTAVKGE*NQTTKGSLENT Trigger: CGTGTTTTCCAGGGAGCCCTTTGTGGTTTGGTTCCATTCCCCCTTTACTGCTGTCAAGGACTTCGTGATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS CAA 72 bp | AAGTCAAAGACGCCACTGGAACGGGGAACCACGGAGTaGACTATCTCTTGTCCACAAAGCACAATCCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: KSKTPLERGTTE*TISCPQSTILS Trigger: TGACAGGATTGTGCTTTGTGGACAAGAGATAGTCAACTCCGTGGTTCCCCGTTCCAGTGGCGTCTTTGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS GCA 72 bp | TCATCTATCTCTTTAACGGAGGTCTCGGGAGTTGTGTaGAAGGGGACAATCACGAAGTCCTTGACAGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: SSISLTEVSGVV*KGTITKSLTAV Trigger: TACTGCTGTCAAGGACTTCGTGATTGTCCCCTTGCACACAACTCCCGAGACCTCCGTTAAAGAGATAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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| CDS CAA 90 bp | TTCAGCTTCTCCATCAGCATGGGACAGATGTTGTTGCTGCTGTCCTaGATTTCCATCAACAGTATAAGGTCACAGCGTTTGATGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: FSFSISMGQMLLLLS*ISINSIRSQRLMIF Trigger: GAAGATCATCAAACGCTGTGACCTTATACTGTTGATGGAAATCAAGGACAGCAGCAACAACATCTGTCCCATGCTGATGGAGAAGCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026315.8 |
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