Pregenerated sensors for DNASE1L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024136Ensembl transcript IDs: ENSMUST00000088506.12, ENSMUST00000119932.8, ENSMUST00000129401.8, ENSMUST00000148820.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACATCGTAGAGCGCGTCGATCTCTGCCACCGCCTGGTGTGGTGCTaGATGGAGGGGGATCAGCACCAGCTCCTTGGTGGCACAGCTAGG | + |
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Preference number: 1 (lower is better) Translates to: HIVERVDLCHRLVWC*MEGDQHQLLGGTAR Trigger: CCTAGCTGTGCCACCAAGGAGCTGGTGCTGATCCCCCTCCATGCAGCACCACACCAGGCGGTGGCAGAGATCGACGCGCTCTACGATGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148820.2 |
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| 3UTR GCA 90 bp | GTACACATCGTAGAGCGCGTCGATCTCTGCCACCGCCTGGTGTGGTaGTGCATGGAGGGGGATCAGCACCAGCTCCTTGGTGGCACAGCT | + |
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Preference number: 1 (lower is better) Translates to: VHIVERVDLCHRLVW*CMEGDQHQLLGGTA Trigger: AGCTGTGCCACCAAGGAGCTGGTGCTGATCCCCCTCCATGCAGCACCACACCAGGCGGTGGCAGAGATCGACGCGCTCTACGATGTGTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148820.2 |
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| 3UTR CCA 90 bp | AGCCATTGTCCACACCAGCTGGTCCGACCCTGTGTCCTCAGTGGGTaGGTGGCCTGCCACCTGAATGATTCACTGTGGTGCCAGTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: SHCPHQLVRPCVLSG*VACHLNDSLWCQSL Trigger: CAAGGACTGGCACCACAGTGAATCATTCAGGTGGCAGGCCACCCACCCACTGAGGACACAGGGTCGGACCAGCTGGTGTGGACAATGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR TCA 90 bp | AGCTGGTCCGACCCTGTGTCCTCAGTGGGTGGGTGGCCTGCCACCTaGATGATTCACTGTGGTGCCAGTCCTTGTGGTAATAGTCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: SWSDPVSSVGGWPAT*MIHCGASPCGNSLQ Trigger: CTGCAGACTATTACCACAAGGACTGGCACCACAGTGAATCATTCAGGTGGCAGGCCACCCACCCACTGAGGACACAGGGTCGGACCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR GCA 90 bp | CCTCCTGAAAGTTGTGAACTGAGGCTGAGTGGGGCTTCAGGCTCCTaGGCAGATGGGCGCCACTCACTACAATCCGGTCATAGGCACAGT | + |
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Preference number: 1 (lower is better) Translates to: PPESCELRLSGASGS*ADGRHSLQSGHRHS Trigger: ACTGTGCCTATGACCGGATTGTAGTGAGTGGCGCCCATCTGCGCAGGAGCCTGAAGCCCCACTCAGCCTCAGTTCACAACTTTCAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129401.8 |
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| 3UTR CCA 90 bp | GCCTCGGTACAGAGGTCTCAGAAAGCAGAGGCCCCATCCAACCTGTaGGTAGTCCTGGCCAAGAGCGGCTTGTTTATTAAGCATGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: ASVQRSQKAEAPSNL*VVLAKSGLFIKHAA Trigger: AGCTGCATGCTTAATAAACAAGCCGCTCTTGGCCAGGACTACCCACAGGTTGGATGGGGCCTCTGCTTTCTGAGACCTCTGTACCGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| 3UTR GCA 90 bp | CCTGCTCCTAAAGTGATGGCCCACCTGAGCATAAAATCTCCATCCTaGCGAGGCCTCGCCCAGCCCAAAGTTTTAAAGCTACTCCATGAG | + |
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Preference number: 1 (lower is better) Translates to: PAPKVMAHLSIKSPS*RGLAQPKVLKLLHE Trigger: CTCATGGAGTAGCTTTAAAACTTTGGGCTGGGCGAGGCCTCGGCAGGATGGAGATTTTATGCTCAGGTGGGCCATCACTTTAGGAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088506.12 |
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| 3UTR CCA 90 bp | ATACGAGCATTTCAAGTTCGCACAAAGGCAATAAGGATAGGGAGCTaGCATGGTGTGGAGGAGCCAGCATCCTCCAGGCTGGGAAGTGAA | + |
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Preference number: 1 (lower is better) Translates to: IRAFQVRTKAIRIGS*HGVEEPASSRLGSE Trigger: TTCACTTCCCAGCCTGGAGGATGCTGGCTCCTCCACACCATGCCAGCTCCCTATCCTTATTGCCTTTGTGCGAACTTGAAATGCTCGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| 3UTR CCA 90 bp | CCAGTCCTTGTGGTAATAGTCTGCAGGTGGCATATCCTGAGGCCTTaGCTCTCAGTGAGTCTTGAAAGTCACTTCCACAGGAAAATGGTC | + |
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Preference number: 1 (lower is better) Translates to: PVLVVIVCRWHILRP*LSVSLESHFHRKMV Trigger: GACCATTTTCCTGTGGAAGTGACTTTCAAGACTCACTGAGAGCCAAGGCCTCAGGATATGCCACCTGCAGACTATTACCACAAGGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129401.8 |
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| 3UTR TCA 90 bp | TCACAGCAGCCCGATGAGGTAGGTGATGTTAGTTCACCTTGCAGATaGGGAAATGGGAGCTTTAAGGAGTCCTGTAAATGTGTTCACAGC | + |
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Preference number: 1 (lower is better) Translates to: SQQPDEVGDVSSPCR*GNGSFKESCKCVHS Trigger: GCTGTGAACACATTTACAGGACTCCTTAAAGCTCCCATTTCCTCATCTGCAAGGTGAACTAACATCACCTACCTCATCGGGCTGCTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR TCA 90 bp | GCTGAAAGCGTCCTCTGGGTCTGGATACTGGTACGTGCTCACCACTaGCGCTACATCTTTCCTGTAAACAAACAGGTACATTTCCTTGTA | + |
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Preference number: 1 (lower is better) Translates to: AESVLWVWILVRAHH*RYIFPVNKQVHFLV Trigger: TACAAGGAAATGTACCTGTTTGTTTACAGGAAAGATGTAGCGTCAGTGGTGAGCACGTACCAGTATCCAGACCCAGAGGACGCTTTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148820.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGAGTGGGGCTTCAGGCTCCTGCGCAGATGGGCGCCACTCACTACAATCCACCCTGTGTCCTCAGTaGGTGGGTGGCCTGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: RLSGASGSCADGRHSLQSTLCPQ*VGGLPP Trigger: AGGTGGCAGGCCACCCACCCACTGAGGACACAGGGT...GGATTGTAGTGAGTGGCGCCCATCTGCGCAGGAGCCTGAAGCCCCACTCAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129401.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCCGACCCTGTGTCCTCAGTGGGTGGGTGGCCTGCCACCTGAATGATTCAACCCTGTGTCCTCAGTaGGTGGGTGGCCTGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: LVRPCVLSGWVACHLNDSTLCPQ*VGGLPP Trigger: AGGTGGCAGGCCACCCACCCACTGAGGACACAGGGT...TGAATCATTCAGGTGGCAGGCCACCCACCCACTGAGGACACAGGGTCGGACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCGCTGCTCGGTTCTCCTCACAGCAGCCCGATGAGGTAGGTGATGTTAGTGCCCCATCCAACCTGTaGGTAGTCCTGGCCAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: PGAARFSSQQPDEVGDVSAPSNL*VVLAKS Trigger: GCTCTTGGCCAGGACTACCCACAGGTTGGATGGGGC...ACTAACATCACCTACCTCATCGGGCTGCTGTGAGGAGAACCGAGCAGCGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACCCTGTGTCCTCAGTGGGGGCCTGCCACCTGAATaGTTCACTGTGGTGCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: CVHSHCPHQLVRPCVLSGGLPPE*FTVVPV Trigger: GACTGGCACCACAGTGAATCATTCAGGTGGCAGGCC...CCCACTGAGGACACAGGGTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR-3UTR GCA 90 bp | AGCGGCTTGTTTATTAAGCATGCAGCTATGTGCCTGGCGCTGCTCGGTTCTCCTGGGGCTTCAGGCTCCTaGGCAGATGGGCGCCACTCA | + |
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Preference number: 2 (lower is better) Translates to: SGLFIKHAAMCLALLGSPGASGS*ADGRHS Trigger: TGAGTGGCGCCCATCTGCGCAGGAGCCTGAAGCCCC...AGGAGAACCGAGCAGCGCCAGGCACATAGCTGCATGCTTAATAAACAAGCCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129401.8 |
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| 3UTR CAA 90 bp | GCAGAGGCCCCATCCAACCTGTGGGTAGTCCTGGCCAAGAGCGGCTaGTTTATTAAGCATGCAGCTATGTGCCTGGCGCTGCTCGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: AEAPSNLWVVLAKSG*FIKHAAMCLALLGS Trigger: AGAACCGAGCAGCGCCAGGCACATAGCTGCATGCTTAATAAACAAGCCGCTCTTGGCCAGGACTACCCACAGGTTGGATGGGGCCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACCCGCCCCATCCAACCTGTaGGTAGTCCTGGCCAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: KESCKCVHSHCPHQLVRPAPSNL*VVLAKS Trigger: GCTCTTGGCCAGGACTACCCACAGGTTGGATGGGGC...GGGTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACATTTACAGGACTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAATGATCAGGGCCTGCTCTCAAATCCAGCAGGGTCCAGAAAGACATTACGGAGCTGGCATGGTGTaGAGGAGCCAGCATCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: GRMIRACSQIQQGPERHYGAGMV*RSQHPP Trigger: TGGAGGATGCTGGCTCCTCCACACCATGCCAGCTCC...GTAATGTCTTTCTGGACCCTGCTGGATTTGAGAGCAGGCCCTGATCATTCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088506.12 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCGCTGCTCGGTTCTCCTCACAGCAGCCCGATGAGGTAGGTGATGTTAGTGGTGTCCGCACTGTCTaGGATGAGCCATTTAAACAC | + |
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Preference number: 2 (lower is better) Translates to: PGAARFSSQQPDEVGDVSGVRTV*DEPFKH Trigger: GTGTTTAAATGGCTCATCCCAGACAGTGCGGACACC...ACTAACATCACCTACCTCATCGGGCTGCTGTGAGGAGAACCGAGCAGCGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129401.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGGCCTGCCACCTGAATaGTTCACTGTGGTGCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: ALRSPVNVFTAIVHTSWSGLPPE*FTVVPV Trigger: GACTGGCACCACAGTGAATCATTCAGGTGGCAGGCC...GGACCAGCTGGTGTGGACAATGGCTGTGAACACATTTACAGGACTCCTTAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR-3UTR CCA 90 bp | GAAATGGGAGCTTTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCCACACCACCCTGTGTCCTCAGTaGGTGGGTGGCCTGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: EMGALRSPVNVFTAIVHTTLCPQ*VGGLPP Trigger: AGGTGGCAGGCCACCCACCCACTGAGGACACAGGGT...GGTGTGGACAATGGCTGTGAACACATTTACAGGACTCCTTAAAGCTCCCATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACAGTGGGTGGGTGGCCTaGCACCTGAATGATTCACTG | + |
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Preference number: 2 (lower is better) Translates to: LRSPVNVFTAIVHTSWSDSGWVA*HLNDSL Trigger: CAGTGAATCATTCAGGTGGCAGGCCACCCACCCACT...GTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACATTTACAGGACTCCTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR-3UTR TCA 90 bp | CACCTTGCAGATGAGGAAATGGGAGCTTTAAGGAGTCCTGTAAATGTGTTCACAGGGTGGCCTGCCACCTaGATGATTCACTGTGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: HLADEEMGALRSPVNVFTGWPAT*MIHCGA Trigger: GGCACCACAGTGAATCATTCAGGTGGCAGGCCACCC...TGTGAACACATTTACAGGACTCCTTAAAGCTCCCATTTCCTCATCTGCAAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR-3UTR TCA 90 bp | GATGAGGAAATGGGAGCTTTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCGGGTGGCCTGCCACCTaGATGATTCACTGTGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: DEEMGALRSPVNVFTAIVGWPAT*MIHCGA Trigger: GGCACCACAGTGAATCATTCAGGTGGCAGGCCACCC...GACAATGGCTGTGAACACATTTACAGGACTCCTTAAAGCTCCCATTTCCTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTTTCAGAAGGTGGCAGAAGAGCTCACTAACGGGGTAGGTGTAGCCGCCATCAGTTCACCTTGCAGATaGGGAAATGGGAGCTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: PFQKVAEELTNGVGVAAISSPCR*GNGSFK Trigger: CTTAAAGCTCCCATTTCCTCATCTGCAAGGTGAACT...GATGGCGGCTACACCTACCCCGTTAGTGAGCTCTTCTGCCACCTTCTGAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088506.12 |
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| 3UTR-3UTR GCA 90 bp | CGGTTCTCCTCACAGCAGCCCGATGAGGTAGGTGATGTTAGTTCACCTTGCAGACTTGTGGTAATAGTCTaGAGGTGGCATATCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: RFSSQQPDEVGDVSSPCRLVVIV*RWHILR Trigger: CCTCAGGATATGCCACCTGCAGACTATTACCACAAG...TCTGCAAGGTGAACTAACATCACCTACCTCATCGGGCTGCTGTGAGGAGAACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR-3UTR GCA 90 bp | GATGAGGAAATGGGAGCTTTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCAGTGGGTGGGTGGCCTaGCACCTGAATGATTCACTG | + |
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Preference number: 2 (lower is better) Translates to: DEEMGALRSPVNVFTAIVSGWVA*HLNDSL Trigger: CAGTGAATCATTCAGGTGGCAGGCCACCCACCCACT...GACAATGGCTGTGAACACATTTACAGGACTCCTTAAAGCTCCCATTTCCTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGCAGATGAGGAAATGGGAGCTTTAAGGAGTCCTGTAAATGTGTTCACAGCCGCTCTCAGTGAGTCTTaGAAGTCACTTCCACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LADEEMGALRSPVNVFTAALSES*KSLPQE Trigger: TTCCTGTGGAAGTGACTTTCAAGACTCACTGAGAGC...GGCTGTGAACACATTTACAGGACTCCTTAAAGCTCCCATTTCCTCATCTGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129401.8 |
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| 3UTR-3UTR GCA 90 bp | GAAATGGGAGCTTTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCCACACCCTTGTGGTAATAGTCTaGAGGTGGCATATCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: EMGALRSPVNVFTAIVHTLVVIV*RWHILR Trigger: CCTCAGGATATGCCACCTGCAGACTATTACCACAAG...GGTGTGGACAATGGCTGTGAACACATTTACAGGACTCCTTAAAGCTCCCATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGCAGATGAGGAAATGGGAGCTTTAAGGAGTCCTGTAAATGTGTTCACAGCCCTTGTGGTAATAGTCTaGAGGTGGCATATCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LADEEMGALRSPVNVFTALVVIV*RWHILR Trigger: CCTCAGGATATGCCACCTGCAGACTATTACCACAAG...GGCTGTGAACACATTTACAGGACTCCTTAAAGCTCCCATTTCCTCATCTGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR GCA 72 bp | GAGCGCGTCGATCTCTGCCACCGCCTGGTGTGGTGCTaGATGGAGGGGGATCAGCACCAGCTCCTTGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: ERVDLCHRLVWC*MEGDQHQLLGG Trigger: GCCACCAAGGAGCTGGTGCTGATCCCCCTCCATGCAGCACCACACCAGGCGGTGGCAGAGATCGACGCGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148820.2 |
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| 3UTR GCA 72 bp | GTAGAGCGCGTCGATCTCTGCCACCGCCTGGTGTGGTaGTGCATGGAGGGGGATCAGCACCAGCTCCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: VERVDLCHRLVW*CMEGDQHQLLG Trigger: ACCAAGGAGCTGGTGCTGATCCCCCTCCATGCAGCACCACACCAGGCGGTGGCAGAGATCGACGCGCTCTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148820.2 |
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| 3UTR CCA 72 bp | CCACACCAGCTGGTCCGACCCTGTGTCCTCAGTGGGTaGGTGGCCTGCCACCTGAATGATTCACTGTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: PHQLVRPCVLSG*VACHLNDSLWC Trigger: GCACCACAGTGAATCATTCAGGTGGCAGGCCACCCACCCACTGAGGACACAGGGTCGGACCAGCTGGTGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR GCA 72 bp | AGTTGTGAACTGAGGCTGAGTGGGGCTTCAGGCTCCTaGGCAGATGGGCGCCACTCACTACAATCCGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: SCELRLSGASGS*ADGRHSLQSGH Trigger: ATGACCGGATTGTAGTGAGTGGCGCCCATCTGCGCAGGAGCCTGAAGCCCCACTCAGCCTCAGTTCACAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129401.8 |
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| 3UTR CCA 72 bp | CCTGTAAATGTGTTCACAGCCATTGTCCACACCAGCTaGTCCGACCCTGTGTCCTCAGTGGGTGGGTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: PVNVFTAIVHTS*SDPVSSVGGWP Trigger: AGGCCACCCACCCACTGAGGACACAGGGTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACATTTACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR-3UTR CAA 90 bp | ACACATCGTAGAGCGCGTCGATCTCTGCCACCGCCTGGTGTGGTGCTGCATGGACTAGGAACTGAGAATTaGACCACAAAAGGCTCCCGG | + |
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Preference number: 3 (lower is better) Translates to: THRRARRSLPPPGVVLHGLGTEN*TTKGSR Trigger: CCGGGAGCCTTTTGTGGTCAAATTCTCAGTTCCTAG...TCCATGCAGCACCACACCAGGCGGTGGCAGAGATCGACGCGCTCTACGATGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148820.2 |
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| 3UTR TCA 72 bp | CTGTGTCCTCAGTGGGTGGGTGGCCTGCCACCTGAATaGTTCACTGTGGTGCCAGTCCTTGTGGTAATAGTC | + |
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Preference number: 3 (lower is better) Translates to: LCPQWVGGLPPE*FTVVPVLVVIV Trigger: GACTATTACCACAAGGACTGGCACCACAGTGAATCATTCAGGTGGCAGGCCACCCACCCACTGAGGACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR CCA 72 bp | CAGAGGTCTCAGAAAGCAGAGGCCCCATCCAACCTGTaGGTAGTCCTGGCCAAGAGCGGCTTGTTTATTAAG | + |
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Preference number: 3 (lower is better) Translates to: QRSQKAEAPSNL*VVLAKSGLFIK Trigger: CTTAATAAACAAGCCGCTCTTGGCCAGGACTACCCACAGGTTGGATGGGGCCTCTGCTTTCTGAGACCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| 3UTR CCA 72 bp | CCATTTAAACACCTCACTGCTTCGAAGGCGGATCGATaGCCAGTCATGCGCCTTCACGTACTTGCAATCGGC | + |
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Preference number: 3 (lower is better) Translates to: PFKHLTASKADR*PVMRLHVLAIG Trigger: GCCGATTGCAAGTACGTGAAGGCGCATGACTGGCCATCGATCCGCCTTCGAAGCAGTGAGGTGTTTAAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129401.8 |
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| 3UTR TCA 72 bp | AGGCCTCGCCCAGCCCAAAGTTTTAAAGCTACTCCATaGGGCACCTTTGAACAGCTTGGCCTAAGCAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: RPRPAQSFKATP*GTFEQLGLSRV Trigger: CACTCTGCTTAGGCCAAGCTGTTCAAAGGTGCCTCATGGAGTAGCTTTAAAACTTTGGGCTGGGCGAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088506.12 |
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| 3UTR GCA 72 bp | ATGGAAATAGACCTACTGGACAGTAAGACCAGGCTCTaGAGCCTCGGTACAGAGGTCTCAGAAAGCAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: MEIDLLDSKTRL*SLGTEVSESRG Trigger: GCCTCTGCTTTCTGAGACCTCTGTACCGAGGCTGCAGAGCCTGGTCTTACTGTCCAGTAGGTCTATTTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| 3UTR CCA 72 bp | ACTGTGGTGCCAGTCCTTGTGGTAATAGTCTGCAGGTaGCATATCCTGAGGCCTTGGCTCTCAGTGAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: TVVPVLVVIVCR*HILRPWLSVSL Trigger: AAGACTCACTGAGAGCCAAGGCCTCAGGATATGCCACCTGCAGACTATTACCACAAGGACTGGCACCACAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129401.8 |
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| 3UTR-3UTR CAA 90 bp | TTCACTGTGGTGCCAGTCCTTGTGGTAATAGTCTGCAGGTGGCATATCCTGAGGCTGGCCAAGAGCGGCTaGTTTATTAAGCATGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: FTVVPVLVVIVCRWHILRLAKSG*FIKHAA Trigger: AGCTGCATGCTTAATAAACAAGCCGCTCTTGGCCAG...CCTCAGGATATGCCACCTGCAGACTATTACCACAAGGACTGGCACCACAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| 3UTR TCA 72 bp | TGGTGTGGAGGAGCCAGCATCCTCCAGGCTGGGAAGTaGACAACAACAATGGAAATAGACCTACTGGACAGT | + |
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Preference number: 3 (lower is better) Translates to: WCGGASILQAGK*TTTMEIDLLDS Trigger: ACTGTCCAGTAGGTCTATTTCCATTGTTGTTGTTCACTTCCCAGCCTGGAGGATGCTGGCTCCTCCACACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| 3UTR GCA 72 bp | AAAGTGATGGCCCACCTGAGCATAAAATCTCCATCCTaGCGAGGCCTCGCCCAGCCCAAAGTTTTAAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: KVMAHLSIKSPS*RGLAQPKVLKL Trigger: TAGCTTTAAAACTTTGGGCTGGGCGAGGCCTCGGCAGGATGGAGATTTTATGCTCAGGTGGGCCATCACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088506.12 |
||
| 3UTR CCA 72 bp | GTGGTAATAGTCTGCAGGTGGCATATCCTGAGGCCTTaGCTCTCAGTGAGTCTTGAAAGTCACTTCCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: VVIVCRWHILRP*LSVSLESHFHR Trigger: CCTGTGGAAGTGACTTTCAAGACTCACTGAGAGCCAAGGCCTCAGGATATGCCACCTGCAGACTATTACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129401.8 |
||
| 3UTR TCA 72 bp | CCAGAAACAGCATGTCATCAGTGTTCCACTTGTCAATaGCATCAAGGTACACATCGTAGAGCGCGTCGATCT | + |
|
Preference number: 3 (lower is better) Translates to: PETACHQCSTCQ*HQGTHRRARRS Trigger: AGATCGACGCGCTCTACGATGTGTACCTTGATGTCATTGACAAGTGGAACACTGATGACATGCTGTTTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148820.2 |
||
| 3UTR TCA 72 bp | CCCGATGAGGTAGGTGATGTTAGTTCACCTTGCAGATaGGGAAATGGGAGCTTTAAGGAGTCCTGTAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: PDEVGDVSSPCR*GNGSFKESCKC Trigger: ACATTTACAGGACTCCTTAAAGCTCCCATTTCCTCATCTGCAAGGTGAACTAACATCACCTACCTCATCGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGCGCTGCTCGGTTCTCCTCACAGCAGCCCGATGAGGTAGGTGATGTTAGTCCCCAGTGCCCAAACTaGTGTCAGCGGGGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGAARFSSQQPDEVGDVSPQCPN*CQRGPG Trigger: CCCTGGGCCCCGCTGACAGCAGTTTGGGCACTGGGG...ACTAACATCACCTACCTCATCGGGCTGCTGTGAGGAGAACCGAGCAGCGCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGTCCTCAGTGGGTGGGTGGCCTGCCACCTGAATGATTCACTGTGGTGCGGGGCTTCAGGCTCCTaGGCAGATGGGCGCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PCVLSGWVACHLNDSLWCGASGS*ADGRHS Trigger: TGAGTGGCGCCCATCTGCGCAGGAGCCTGAAGCCCC...GCACCACAGTGAATCATTCAGGTGGCAGGCCACCCACCCACTGAGGACACAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGGCCCCATCCAACCTGTGGGTAGTCCTGGCCAAGAGCGGCTTGTTTATGCGCTGTGGCTCCCATaGCCCCCAGTGCCCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SRGPIQPVGSPGQERLVYALWLP*PPVPKL Trigger: CAGTTTGGGCACTGGGGGTCATGGGAGCCACAGCGC...ATAAACAAGCCGCTCTTGGCCAGGACTACCCACAGGTTGGATGGGGCCTCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR TCA 90 bp | GCGCGTCGATCTCTGCCACCGCCTGGTGTGGTGCTGCATGGAGGGGGATCAGCACCAGGATCTGTGCTATaGCACTGCCACAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARRSLPPPGVVLHGGGSAPGSVL*HCHSLD Trigger: ATCCAGACTGTGGCAGTGTCATAGCACAGATCCTGG...TGCTGATCCCCCTCCATGCAGCACCACACCAGGCGGTGGCAGAGATCGACGCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148820.2 |
||
| CDS-3UTR CCA 90 bp | CGACCCTGTGTCCTCAGTGGGTGGGTGGCCTGCCACCTGAATGATTCACTGTGGTGGTGTGGTGCTGCATaGAGGGGGATCAGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPCVLSGWVACHLNDSLWWCGAA*RGISTS Trigger: GCTGGTGCTGATCCCCCTCCATGCAGCACCACACCA...CCACAGTGAATCATTCAGGTGGCAGGCCACCCACCCACTGAGGACACAGGGTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTCCGACCCTGTGTCCTCAGTGGGTGGGTGGCCTGCCACCTGAATGATTCACTGGTCACGTCCGAGTaGCTTGCTGCTCACAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVRPCVLSGWVACHLNDSLVTSE*LAAHKA Trigger: GGCTTTGTGAGCAGCAAGCCACTCGGACGTGACCAG...TGAATCATTCAGGTGGCAGGCCACCCACCCACTGAGGACACAGGGTCGGACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACCCGCGCTGTGGCTCCCATaGCCCCCAGTGCCCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KESCKCVHSHCPHQLVRPALWLP*PPVPKL Trigger: CAGTTTGGGCACTGGGGGTCATGGGAGCCACAGCGC...GGGTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACATTTACAGGACTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR TCA 90 bp | GAATTTGACCACAAAAGGCTCCCGGCTGAAAGCGTCCTCTGGGTCTGGATACTGGCGCTGTGGCTCCCATaGCCCCCAGTGCCCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: EFDHKRLPAESVLWVWILALWLP*PPVPKL Trigger: CAGTTTGGGCACTGGGGGTCATGGGAGCCACAGCGC...CAGTATCCAGACCCAGAGGACGCTTTCAGCCGGGAGCCTTTTGTGGTCAAATTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148820.2 |
||
| CDS-3UTR TCA 90 bp | GAGCGCGTCGATCTCTGCCACCGCCTGGTGTGGTGCTGCATGGAGGGGGATCAGGCCACAGTCTGGATCTaGCACTTTGTTGTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ERVDLCHRLVWCCMEGDQATVWI*HFVVSK Trigger: TTTGGAGACAACAAAGTGTCAGATCCAGACTGTGGC...CTGATCCCCCTCCATGCAGCACCACACCAGGCGGTGGCAGAGATCGACGCGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148820.2 |
||
| CDS-3UTR GCA 90 bp | TTGGTGGCACAGCTAGGAACTGAGAATTTGACCACAAAAGGCTCCCGGCTGAAACCCCAGTGCCCAAACTaGTGTCAGCGGGGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVAQLGTENLTTKGSRLKPQCPN*CQRGPG Trigger: CCCTGGGCCCCGCTGACAGCAGTTTGGGCACTGGGG...TTTCAGCCGGGAGCCTTTTGTGGTCAAATTCTCAGTTCCTAGCTGTGCCACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148820.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTAGTCCTGGCCAAGAGCGGCTTGTTTATTAAGCATGCAGCTATGTGCCTGGGGGCTTCAGGCTCCTaGGCAGATGGGCGCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: WVVLAKSGLFIKHAAMCLGASGS*ADGRHS Trigger: TGAGTGGCGCCCATCTGCGCAGGAGCCTGAAGCCCC...CAGGCACATAGCTGCATGCTTAATAAACAAGCCGCTCTTGGCCAGGACTACCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGGCCCCATCCAACCTGTGGGTAGTCCTGGCCAAGAGCGGCTTGTTTATCTGAGTTGCCCACTGTaGTGTCCGCACTGTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRGPIQPVGSPGQERLVYLSCPL*CPHCLG Trigger: TCCCAGACAGTGCGGACACCACAGTGGGCAACTCAG...ATAAACAAGCCGCTCTTGGCCAGGACTACCCACAGGTTGGATGGGGCCTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR CCA 90 bp | GTAAATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACCCTGTGTCCTCATGGTGTGGTGCTGCATaGAGGGGGATCAGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VNVFTAIVHTSWSDPVSSWCGAA*RGISTS Trigger: GCTGGTGCTGATCCCCCTCCATGCAGCACCACACCA...TGAGGACACAGGGTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACATTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR TCA 90 bp | CGACCCTGTGTCCTCAGTGGGTGGGTGGCCTGCCACCTGAATGATTCACTGTGGGCCACAGTCTGGATCTaGCACTTTGTTGTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RPCVLSGWVACHLNDSLWATVWI*HFVVSK Trigger: TTTGGAGACAACAAAGTGTCAGATCCAGACTGTGGC...CCACAGTGAATCATTCAGGTGGCAGGCCACCCACCCACTGAGGACACAGGGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAAGCAGAGGCCCCATCCAACCTGTGGGTAGTCCTGGCCAAGAGCGGCTTGGTGTCCGCACTGTCTaGGATGAGCCATTTAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SESRGPIQPVGSPGQERLGVRTV*DEPFKH Trigger: GTGTTTAAATGGCTCATCCCAGACAGTGCGGACACC...AAGCCGCTCTTGGCCAGGACTACCCACAGGTTGGATGGGGCCTCTGCTTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACCCTGTGTCCTCAGTGGGGGTGTCCGCACTGTCTaGGATGAGCCATTTAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: CVHSHCPHQLVRPCVLSGGVRTV*DEPFKH Trigger: GTGTTTAAATGGCTCATCCCAGACAGTGCGGACACC...CCCACTGAGGACACAGGGTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| 3UTR CAA 72 bp | CCATCCAACCTGTGGGTAGTCCTGGCCAAGAGCGGCTaGTTTATTAAGCATGCAGCTATGTGCCTGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSNLWVVLAKSG*FIKHAAMCLAL Trigger: CAGCGCCAGGCACATAGCTGCATGCTTAATAAACAAGCCGCTCTTGGCCAGGACTACCCACAGGTTGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| 3UTR CAA 72 bp | TGTGGTGCTGCATGGAGGGGGATCAGCACCAGCTCCTaGGTGGCACAGCTAGGAACTGAGAATTTGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: CGAAWRGISTSS*VAQLGTENLTT Trigger: TGTGGTCAAATTCTCAGTTCCTAGCTGTGCCACCAAGGAGCTGGTGCTGATCCCCCTCCATGCAGCACCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148820.2 |
||
| CDS-3UTR GCA 90 bp | GATGAGGAAATGGGAGCTTTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCCCCCAGTGCCCAAACTaGTGTCAGCGGGGCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DEEMGALRSPVNVFTAIVPQCPN*CQRGPG Trigger: CCCTGGGCCCCGCTGACAGCAGTTTGGGCACTGGGG...GACAATGGCTGTGAACACATTTACAGGACTCCTTAAAGCTCCCATTTCCTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGAATGATCAGGGCCTGCTCTCAAATCCAGCAGGGTCCAGAAAGACATTACGCCGGCCAGGATCTGTaGTATGACACTGCCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRMIRACSQIQQGPERHYAGQDL*YDTATV Trigger: GACTGTGGCAGTGTCATAGCACAGATCCTGGCCGGC...GTAATGTCTTTCTGGACCCTGCTGGATTTGAGAGCAGGCCCTGATCATTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088506.12 |
||
| CDS-3UTR CCA 90 bp | TGGGTAGTCCTGGCCAAGAGCGGCTTGTTTATTAAGCATGCAGCTATGTGCCTGCTGGTCACGTCCGAGTaGCTTGCTGCTCACAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WVVLAKSGLFIKHAAMCLLVTSE*LAAHKA Trigger: GGCTTTGTGAGCAGCAAGCCACTCGGACGTGACCAG...CAGGCACATAGCTGCATGCTTAATAAACAAGCCGCTCTTGGCCAGGACTACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTGTTTATTAAGCATGCAGCTATGTGCCTGGCGCTGCTCGGTTCTCCTCACCCAGGATCTGTGCTATaGCACTGCCACAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLFIKHAAMCLALLGSPHPGSVL*HCHSLD Trigger: ATCCAGACTGTGGCAGTGTCATAGCACAGATCCTGG...GTGAGGAGAACCGAGCAGCGCCAGGCACATAGCTGCATGCTTAATAAACAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR TCA 90 bp | GTAAATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACCCTGTGTCCTCACCAGGATCTGTGCTATaGCACTGCCACAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VNVFTAIVHTSWSDPVSSPGSVL*HCHSLD Trigger: ATCCAGACTGTGGCAGTGTCATAGCACAGATCCTGG...TGAGGACACAGGGTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACATTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGCCGGCCAGGATCTGTaGTATGACACTGCCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALRSPVNVFTAIVHTSWSAGQDL*YDTATV Trigger: GACTGTGGCAGTGTCATAGCACAGATCCTGGCCGGC...GGACCAGCTGGTGTGGACAATGGCTGTGAACACATTTACAGGACTCCTTAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACAGGCACAGTCTGAGTTaGCCACTGTGGTGTCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRSPVNVFTAIVHTSWSDRHSLS*PLWCPH Trigger: GTGCGGACACCACAGTGGGCAACTCAGACTGTGCCT...GTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACATTTACAGGACTCCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR CCA 90 bp | AACCTGTGGGTAGTCCTGGCCAAGAGCGGCTTGTTTATTAAGCATGCAGCTATGCTGAGTTGCCCACTGTaGTGTCCGCACTGTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLWVVLAKSGLFIKHAAMLSCPL*CPHCLG Trigger: TCCCAGACAGTGCGGACACCACAGTGGGCAACTCAG...CATAGCTGCATGCTTAATAAACAAGCCGCTCTTGGCCAGGACTACCCACAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR CCA 90 bp | GATGAGGAAATGGGAGCTTTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCTGCCACCGCCTGGTGTaGTGCTGCATGGAGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DEEMGALRSPVNVFTAIVCHRLV*CCMEGD Trigger: ATCCCCCTCCATGCAGCACCACACCAGGCGGTGGCA...GACAATGGCTGTGAACACATTTACAGGACTCCTTAAAGCTCCCATTTCCTCATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTTCAGAAGGTGGCAGAAGAGCTCACTAACGGGGTAGGTGTAGCCGCCATCTTGTCTCCAAAGCTCTaGACATTGAAGGCTCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: PFQKVAEELTNGVGVAAILSPKL*TLKAPI Trigger: GATTGGAGCCTTCAATGTTCAGAGCTTTGGAGACAA...GATGGCGGCTACACCTACCCCGTTAGTGAGCTCTTCTGCCACCTTCTGAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088506.12 |
||
| CDS-3UTR TCA 90 bp | ATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACCCTGTGTCCTCAGTGGTGTTCCACTTGTCAATaGCATCAAGGTACACATCGT | + |
|
Preference number: 4 (lower is better) Translates to: MCSQPLSTPAGPTLCPQWCSTCQ*HQGTHR Trigger: ACGATGTGTACCTTGATGTCATTGACAAGTGGAACA...CCACTGAGGACACAGGGTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACCCACTTCCACAGGAAAATaGTCACTGATGGCAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KESCKCVHSHCPHQLVRPTSTGK*SLMARA Trigger: GGCTCTTGCCATCAGTGACCATTTTCCTGTGGAAGT...GGGTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACATTTACAGGACTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR TCA 90 bp | AGCGGCTTGTTTATTAAGCATGCAGCTATGTGCCTGGCGCTGCTCGGTTCTCCTTTGTCTCCAAAGCTCTaGACATTGAAGGCTCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SGLFIKHAAMCLALLGSPLSPKL*TLKAPI Trigger: GATTGGAGCCTTCAATGTTCAGAGCTTTGGAGACAA...AGGAGAACCGAGCAGCGCCAGGCACATAGCTGCATGCTTAATAAACAAGCCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR GCA 90 bp | GATGAGGAAATGGGAGCTTTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCAGGCACAGTCTGAGTTaGCCACTGTGGTGTCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DEEMGALRSPVNVFTAIVRHSLS*PLWCPH Trigger: GTGCGGACACCACAGTGGGCAACTCAGACTGTGCCT...GACAATGGCTGTGAACACATTTACAGGACTCCTTAAAGCTCCCATTTCCTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR TCA 90 bp | TTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACGCCACAGTCTGGATCTaGCACTTTGTTGTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRSPVNVFTAIVHTSWSDATVWI*HFVVSK Trigger: TTTGGAGACAACAAAGTGTCAGATCCAGACTGTGGC...GTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACATTTACAGGACTCCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTGTTTATTAAGCATGCAGCTATGTGCCTGGCGCTGCTCGGTTCTCCTCACTGTTCCACTTGTCAATaGCATCAAGGTACACATCGT | + |
|
Preference number: 4 (lower is better) Translates to: GLFIKHAAMCLALLGSPHCSTCQ*HQGTHR Trigger: ACGATGTGTACCTTGATGTCATTGACAAGTGGAACA...GTGAGGAGAACCGAGCAGCGCCAGGCACATAGCTGCATGCTTAATAAACAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR TCA 90 bp | CTTGCAGATGAGGAAATGGGAGCTTTAAGGAGTCCTGTAAATGTGTTCACAGCCCAGGAAAATGGTCACTaGTGGCAAGAGCCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LADEEMGALRSPVNVFTAQENGH*WQEPGS Trigger: AGACCCAGGCTCTTGCCATCAGTGACCATTTTCCTG...GGCTGTGAACACATTTACAGGACTCCTTAAAGCTCCCATTTCCTCATCTGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR CCA 90 bp | AACCTGTGGGTAGTCCTGGCCAAGAGCGGCTTGTTTATTAAGCATGCAGCTATGACTTCCACAGGAAAATaGTCACTGATGGCAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLWVVLAKSGLFIKHAAMTSTGK*SLMARA Trigger: GGCTCTTGCCATCAGTGACCATTTTCCTGTGGAAGT...CATAGCTGCATGCTTAATAAACAAGCCGCTCTTGGCCAGGACTACCCACAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR TCA 90 bp | GATGAGGAAATGGGAGCTTTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCCAGGAAAATGGTCACTaGTGGCAAGAGCCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DEEMGALRSPVNVFTAIVQENGH*WQEPGS Trigger: AGACCCAGGCTCTTGCCATCAGTGACCATTTTCCTG...GACAATGGCTGTGAACACATTTACAGGACTCCTTAAAGCTCCCATTTCCTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR CAA 90 bp | GCGCGTCGATCTCTGCCACCGCCTGGTGTGGTGCTGCATGGAGGGGGATCAGCATGCTTGGACACTCTCTaGCACCAGGGCGATATCATA | + |
|
Preference number: 5 (lower is better) Translates to: ARRSLPPPGVVLHGGGSACLDTL*HQGDII Trigger: TATGATATCGCCCTGGTGCAAGAGAGTGTCCAAGCA...TGCTGATCCCCCTCCATGCAGCACCACACCAGGCGGTGGCAGAGATCGACGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148820.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGAGGCCCCATCCAACCTGTGGGTAGTCCTGGCCAAGAGCGGCTTGTTTTCACGTCCGAGTGGCTaGCTGCTCACAAAGCCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: KAEAPSNLWVVLAKSGLFSRPSG*LLTKPY Trigger: GTACGGCTTTGTGAGCAGCAAGCCACTCGGACGTGA...AAACAAGCCGCTCTTGGCCAGGACTACCCACAGGTTGGATGGGGCCTCTGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
||
| CDS-3UTR CAA 90 bp | CCCTGTGTCCTCAGTGGGTGGGTGGCCTGCCACCTGAATGATTCACTGTGGTGCCTAGGAACTGAGAATTaGACCACAAAAGGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PCVLSGWVACHLNDSLWCLGTEN*TTKGSR Trigger: CCGGGAGCCTTTTGTGGTCAAATTCTCAGTTCCTAG...GCACCACAGTGAATCATTCAGGTGGCAGGCCACCCACCCACTGAGGACACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAAAGCAGAGGCCCCATCCAACCTGTGGGTAGTCCTGGCCAAGAGCGGCTTAACAGGTACATTTCCTaGTACTGGTCACGTCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SESRGPIQPVGSPGQERLNRYIS*YWSRPS Trigger: ACTCGGACGTGACCAGTACAAGGAAATGTACCTGTT...AAGCCGCTCTTGGCCAGGACTACCCACAGGTTGGATGGGGCCTCTGCTTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS-3UTR CAA 90 bp | ATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACCCTGTGTCCTCAGTGGCTAGGAACTGAGAATTaGACCACAAAAGGCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: MCSQPLSTPAGPTLCPQWLGTEN*TTKGSR Trigger: CCGGGAGCCTTTTGTGGTCAAATTCTCAGTTCCTAG...CCACTGAGGACACAGGGTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| CDS TCA 90 bp | ACACTGCCACAGTCTGGATCTGACACTTTGTTGTCTCCAAAGCTCTaGACATTGAAGGCTCCAATCCGCAGCGCTGTGGCTCCCATGACC | + |
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Preference number: 5 (lower is better) Translates to: TLPQSGSDTLLSPKL*TLKAPIRSAVAPMT Trigger: GGTCATGGGAGCCACAGCGCTGCGGATTGGAGCCTTCAATGTTCAGAGCTTTGGAGACAACAAAGTGTCAGATCCAGACTGTGGCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000148820.2 |
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| CDS-3UTR CAA 90 bp | AAAGCAGAGGCCCCATCCAACCTGTGGGTAGTCCTGGCCAAGAGCGGCTTGTTTAAGCCGTACTCGTGCTaGGACACTCTGTTAATTTGC | + |
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Preference number: 5 (lower is better) Translates to: KAEAPSNLWVVLAKSGLFKPYSC*DTLLIC Trigger: GCAAATTAACAGAGTGTCCAAGCACGAGTACGGCTT...AAACAAGCCGCTCTTGGCCAGGACTACCCACAGGTTGGATGGGGCCTCTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS-3UTR CAA 90 bp | AATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACCCTGTGTCCTCAGTGCTAGGAACTGAGAATTaGACCACAAAAGGCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: NVFTAIVHTSWSDPVSSVLGTEN*TTKGSR Trigger: CCGGGAGCCTTTTGTGGTCAAATTCTCAGTTCCTAG...CACTGAGGACACAGGGTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000129401.8 |
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| CDS GCA 90 bp | TACTGGTCACGTCCGAGTGGCTTGCTGCTCACAAAGCCGTACTCGTaGTTGGACACTCTGTTAATTTGCTCCATGAGCAAGGACACTGCA | + |
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Preference number: 5 (lower is better) Translates to: YWSRPSGLLLTKPYS*LDTLLICSMSKDTA Trigger: TGCAGTGTCCTTGCTCATGGAGCAAATTAACAGAGTGTCCAAGCACGAGTACGGCTTTGTGAGCAGCAAGCCACTCGGACGTGACCAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS CCA 90 bp | TGGGATGAGCCATTTAAACACCTCACTGCTTCGAAGGCGGATCGATaGCCAGTCATGCGCCTTCACGTACTTGCAATCGGCATTAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: WDEPFKHLTASKADR*PVMRLHVLAIGIKV Trigger: GACTTTAATGCCGATTGCAAGTACGTGAAGGCGCATGACTGGCCATCGATCCGCCTTCGAAGCAGTGAGGTGTTTAAATGGCTCATCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS-3UTR CAA 90 bp | TGTAAATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACCCTGTGTCCTCAACAGGTACATTTCCTaGTACTGGTCACGTCCGAGT | + |
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Preference number: 5 (lower is better) Translates to: CKCVHSHCPHQLVRPCVLNRYIS*YWSRPS Trigger: ACTCGGACGTGACCAGTACAAGGAAATGTACCTGTT...GAGGACACAGGGTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACATTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS GCA 90 bp | CATTTAAACACCTCACTGCTTCGAAGGCGGATCGATGGCCAGTCATaGGCCTTCACGTACTTGCAATCGGCATTAAAGTCACCCAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: HLNTSLLRRRIDGQS*AFTYLQSALKSPRN Trigger: GTTTCTGGGTGACTTTAATGCCGATTGCAAGTACGTGAAGGCGCATGACTGGCCATCGATCCGCCTTCGAAGCAGTGAGGTGTTTAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS CCA 90 bp | CCTGTAAACAAACAGGTACATTTCCTTGTACTGGTCACGTCCGAGTaGCTTGCTGCTCACAAAGCCGTACTCGTGCTTGGACACTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: PVNKQVHFLVLVTSE*LAAHKAVLVLGHSV Trigger: AACAGAGTGTCCAAGCACGAGTACGGCTTTGTGAGCAGCAAGCCACTCGGACGTGACCAGTACAAGGAAATGTACCTGTTTGTTTACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS TCA 90 bp | ATAGCCGGCCAGGATCTGTGCTATGACACTGCCACAGTCTGGATCTaGCACTTTGTTGTCTCCAAAGCTCTGAACATTGAAGGCTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: IAGQDLCYDTATVWI*HFVVSKALNIEGSN Trigger: ATTGGAGCCTTCAATGTTCAGAGCTTTGGAGACAACAAAGTGTCAGATCCAGACTGTGGCAGTGTCATAGCACAGATCCTGGCCGGCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000148820.2 |
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| CDS-3UTR CAA 90 bp | GCTTTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGGACACTCTGTTAATTaGCTCCATGAGCAAGGACAC | + |
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Preference number: 5 (lower is better) Translates to: ALRSPVNVFTAIVHTSWSGHSVN*LHEQGH Trigger: GTGTCCTTGCTCATGGAGCAAATTAACAGAGTGTCC...GGACCAGCTGGTGTGGACAATGGCTGTGAACACATTTACAGGACTCCTTAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS-3UTR CAA 90 bp | TTAAGGAGTCCTGTAAATGTGTTCACAGCCATTGTCCACACCAGCTGGTCCGACGGACACTCTGTTAATTaGCTCCATGAGCAAGGACAC | + |
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Preference number: 5 (lower is better) Translates to: LRSPVNVFTAIVHTSWSDGHSVN*LHEQGH Trigger: GTGTCCTTGCTCATGGAGCAAATTAACAGAGTGTCC...GTCGGACCAGCTGGTGTGGACAATGGCTGTGAACACATTTACAGGACTCCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS-3UTR CAA 90 bp | ATGATTCACTGTGGTGCCAGTCCTTGTGGTAATAGTCTGCAGGTGGCATATCCTAAGCCGTACTCGTGCTaGGACACTCTGTTAATTTGC | + |
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Preference number: 5 (lower is better) Translates to: MIHCGASPCGNSLQVAYPKPYSC*DTLLIC Trigger: GCAAATTAACAGAGTGTCCAAGCACGAGTACGGCTT...AGGATATGCCACCTGCAGACTATTACCACAAGGACTGGCACCACAGTGAATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS GCA 72 bp | CGTCCGAGTGGCTTGCTGCTCACAAAGCCGTACTCGTaGTTGGACACTCTCTTGCACCAGGGCGATATCATA | + |
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Preference number: 6 (lower is better) Translates to: RPSGLLLTKPYS*LDTLLHQGDII Trigger: TATGATATCGCCCTGGTGCAAGAGAGTGTCCAAGCACGAGTACGGCTTTGTGAGCAGCAAGCCACTCGGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148820.2 |
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| CDS GCA 72 bp | GGTACATTTCCTTGTACTGGTCACGTCCGAGTGGCTTaGTGCTCACAAAGCCGTACTCGTGCTTGGACACTC | + |
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Preference number: 6 (lower is better) Translates to: GTFPCTGHVRVA*CSQSRTRAWTL Trigger: GAGTGTCCAAGCACGAGTACGGCTTTGTGAGCAGCAAGCCACTCGGACGTGACCAGTACAAGGAAATGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS TCA 72 bp | CCAGGGCGATATCATAGCCGGCCAGGATCTGTGCTATaGCACTGCCACAGTCTGGATCTGACACTTTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PGRYHSRPGSVL*HCHSLDLTLCC Trigger: ACAACAAAGTGTCAGATCCAGACTGTGGCAGTGTCATAGCACAGATCCTGGCCGGCTATGATATCGCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 ENSMUST00000148820.2 |
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| CDS GCA 72 bp | CGTCCGAGTGGCTTGCTGCTCACAAAGCCGTACTCGTaGTTGGACACTCTGTTAATTTGCTCCATGAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: RPSGLLLTKPYS*LDTLLICSMSK Trigger: CTTGCTCATGGAGCAAATTAACAGAGTGTCCAAGCACGAGTACGGCTTTGTGAGCAGCAAGCCACTCGGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS GCA 72 bp | ACATTTCCTTGTACTGGTCACGTCCGAGTGGCTTGCTaGTCACAAAGCCGTACTCGTGCTTGGACACTCTGT | + |
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Preference number: 6 (lower is better) Translates to: TFPCTGHVRVAC*SQSRTRAWTLC Trigger: ACAGAGTGTCCAAGCACGAGTACGGCTTTGTGAGCAGCAAGCCACTCGGACGTGACCAGTACAAGGAAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS GCA 72 bp | ACCTCACTGCTTCGAAGGCGGATCGATGGCCAGTCATaGGCCTTCACGTACTTGCAATCGGCATTAAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: TSLLRRRIDGQS*AFTYLQSALKS Trigger: TGACTTTAATGCCGATTGCAAGTACGTGAAGGCGCATGACTGGCCATCGATCCGCCTTCGAAGCAGTGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS CAA 72 bp | CCGAGTGGCTTGCTGCTCACAAAGCCGTACTCGTGCTaGGACACTCTGTTAATTTGCTCCATGAGCAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: PSGLLLTKPYSC*DTLLICSMSKD Trigger: GTCCTTGCTCATGGAGCAAATTAACAGAGTGTCCAAGCACGAGTACGGCTTTGTGAGCAGCAAGCCACTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS CAA 72 bp | AGGTACATTTCCTTGTACTGGTCACGTCCGAGTGGCTaGCTGCTCACAAAGCCGTACTCGTGCTTGGACACT | + |
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Preference number: 6 (lower is better) Translates to: RYISLYWSRPSG*LLTKPYSCLDT Trigger: AGTGTCCAAGCACGAGTACGGCTTTGTGAGCAGCAAGCCACTCGGACGTGACCAGTACAAGGAAATGTACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS CAA 90 bp | TGGTCACGTCCGAGTGGCTTGCTGCTCACAAAGCCGTACTCGTGCTaGGACACTCTGTTAATTTGCTCCATGAGCAAGGACACTGCACTT | + |
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Preference number: 6 (lower is better) Translates to: WSRPSGLLLTKPYSC*DTLLICSMSKDTAL Trigger: AAGTGCAGTGTCCTTGCTCATGGAGCAAATTAACAGAGTGTCCAAGCACGAGTACGGCTTTGTGAGCAGCAAGCCACTCGGACGTGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS CAA 90 bp | CTGCTTCGAAGGCGGATCGATGGCCAGTCATGCGCCTTCACGTACTaGCAATCGGCATTAAAGTCACCCAGAAACAGCATGTCATCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LLRRRIDGQSCAFTY*QSALKSPRNSMSSV Trigger: CACTGATGACATGCTGTTTCTGGGTGACTTTAATGCCGATTGCAAGTACGTGAAGGCGCATGACTGGCCATCGATCCGCCTTCGAAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS CCA 72 bp | AAACAGGTACATTTCCTTGTACTGGTCACGTCCGAGTaGCTTGCTGCTCACAAAGCCGTACTCGTGCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: KQVHFLVLVTSE*LAAHKAVLVLG Trigger: TCCAAGCACGAGTACGGCTTTGTGAGCAGCAAGCCACTCGGACGTGACCAGTACAAGGAAATGTACCTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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| CDS CAA 72 bp | CCAGAAACAGCATGTCCACAGCTAGGAACTGAGAATTaGACCACAAAAGGCTCCCGGCTGAAAGCGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: PETACPQLGTEN*TTKGSRLKASS Trigger: AGAGGACGCTTTCAGCCGGGAGCCTTTTGTGGTCAAATTCTCAGTTCCTAGCTGTGGACATGCTGTTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129401.8 |
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| CDS GCA 72 bp | ACAAAGCCGTACTCGTGCTTGGACACTCTGTTAATTTaGTCCATGAGCAAGGACACTGCACTTAGGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: TKPYSCLDTLLI*SMSKDTALRSG Trigger: CCCAGACCTAAGTGCAGTGTCCTTGCTCATGGAGCAAATTAACAGAGTGTCCAAGCACGAGTACGGCTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088506.12 ENSMUST00000119932.8 |
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