Pregenerated sensors for DNASE1L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019088Ensembl transcript IDs: ENSMUST00000019232.10, ENSMUST00000075821.10, ENSMUST00000114189.10, ENSMUST00000119361.4, ENSMUST00000239445.2, ENSMUST00000239458.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GGTGAAGTCCTGTCTACCCAACAGGATTCAAGCCCAAGGCACTTGTaGCTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: GEVLSTQQDSSPRHL*LSYTPSPSFLRIAS Trigger: GCTTGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAGCAACAAGTGCCTTGGGCTTGAATCCTGTTGGGTAGACAGGACTTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000114189.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGATTACTTAGACCTAAGGTTATTTCTACTGGAGCTTaGTTCCTAACTACCTCAGGT | + |
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Preference number: 3 (lower is better) Translates to: AEPCSIVHGEARLLRPKVISTGA*FLTTSG Trigger: ACCTGAGGTAGTTAGGAACAAAGCTCCAGTAGAAAT...AACCTTAGGTCTAAGTAATCTTGCTTCTCCATGCACTATACTACATGGCTCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| 3UTR TCA 72 bp | TCATTTGTATCAGTTGCAGAAATCTTAGGTATGATCTaGGCCCATTTCTACTGGAGCTTTGTTCCTAACTAC | + |
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Preference number: 3 (lower is better) Translates to: SFVSVAEILGMI*AHFYWSFVPNY Trigger: GTAGTTAGGAACAAAGCTCCAGTAGAAATGGGCTCAGATCATACCTAAGATTTCTGCAACTGATACAAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000114189.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | CCAAGGCACTTGTTGCTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCATCAGGAATCACCCAGTaGAAGCCTGCCTTAGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: PRHLLLSYTPSPSFLRIASGITQ*KPALVR Trigger: CCGGACTAAGGCAGGCTTCCACTGGGTGATTCCTGA...TGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAGCAACAAGTGCCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | AGGCACTTGTTGCTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCAAGCCTCAGTGGAGTGGCCTaGCTCAGTTCCACTTCTACA | + |
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Preference number: 4 (lower is better) Translates to: RHLLLSYTPSPSFLRIASLSGVA*LSSTST Trigger: TGTAGAAGTGGAACTGAGCCAGGCCACTCCACTGAG...GCTTGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAGCAACAAGTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000114189.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | TCTGAGCCCATTTCTACTGGAGCTTTGTTCCTAACTACCTCAGGTGAAGTCCTGGGATACTCAGTGGAGTaGCCTGGCTCAGTTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SEPISTGALFLTTSGEVLGYSVE*PGSVPL Trigger: AAGTGGAACTGAGCCAGGCCACTCCACTGAGTATCC...CAGGACTTCACCTGAGGTAGTTAGGAACAAAGCTCCAGTAGAAATGGGCTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000114189.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR TCA 90 bp | AGGCACTTGTTGCTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCAAGCTCAGTCTGTGGGCATTaGAGGCACAGATACGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHLLLSYTPSPSFLRIASSVCGH*RHRYER Trigger: CCTTTCGTATCTGTGCCTTCAATGCCCACAGACTGA...GCTTGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAGCAACAAGTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000114189.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR GCA 90 bp | TCTGAGCCCATTTCTACTGGAGCTTTGTTCCTAACTACCTCAGGTGAAGTCCTGTTTCCTTGTATGTGCTaGGCCCCAGCAATGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEPISTGALFLTTSGEVLFPCMC*APAMSC Trigger: ACAGCTCATTGCTGGGGCGCAGCACATACAAGGAAA...CAGGACTTCACCTGAGGTAGTTAGGAACAAAGCTCCAGTAGAAATGGGCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | CCAAGGCACTTGTTGCTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCACTAGGGAGAGTGAAATaGGCCACAAATGGTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: PRHLLLSYTPSPSFLRIALGRVK*ATNGSR Trigger: CCGAGAACCATTTGTGGCCCATTTCACTCTCCCTAG...TGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAGCAACAAGTGCCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | TCTGAGCCCATTTCTACTGGAGCTTTGTTCCTAACTACCTCAGGTGAAGTCCTGCTAGGGAGAGTGAAATaGGCCACAAATGGTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SEPISTGALFLTTSGEVLLGRVK*ATNGSR Trigger: CCGAGAACCATTTGTGGCCCATTTCACTCTCCCTAG...CAGGACTTCACCTGAGGTAGTTAGGAACAAAGCTCCAGTAGAAATGGGCTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | CCAAGGCACTTGTTGCTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCACCTTCTCAACATCCTTaGGAGTGGTGTGGAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: PRHLLLSYTPSPSFLRIAPSQHP*EWCGEE Trigger: TTCCTCTCCACACCACTCCCAAGGATGTTGAGAAGG...TGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAGCAACAAGTGCCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | CTGACAACACTGGCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGATTACTTTCAGGAATCACCCAGTaGAAGCCTGCCTTAGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: LTTLAEPCSIVHGEARLLSGITQ*KPALVR Trigger: CCGGACTAAGGCAGGCTTCCACTGGGTGATTCCTGA...AAGTAATCTTGCTTCTCCATGCACTATACTACATGGCTCTGCCAGTGTTGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | GCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGATTACTTAGACCTAAGGTTTCAGGAATCACCCAGTaGAAGCCTGCCTTAGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AEPCSIVHGEARLLRPKVSGITQ*KPALVR Trigger: CCGGACTAAGGCAGGCTTCCACTGGGTGATTCCTGA...AACCTTAGGTCTAAGTAATCTTGCTTCTCCATGCACTATACTACATGGCTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | TTGCTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCAAGCAGCTATTTATCAGGAATCACCCAGTaGAAGCCTGCCTTAGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSYTPSPSFLRIASSYLSGITQ*KPALVR Trigger: CCGGACTAAGGCAGGCTTCCACTGGGTGATTCCTGA...TAAATAGCTGCTTGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | TTAAACCTGACAACACTGGCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGACTCAGTGGAGTGGCCTaGCTCAGTTCCACTTCTACA | + |
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Preference number: 4 (lower is better) Translates to: LNLTTLAEPCSIVHGEARLSGVA*LSSTST Trigger: TGTAGAAGTGGAACTGAGCCAGGCCACTCCACTGAG...TCTTGCTTCTCCATGCACTATACTACATGGCTCTGCCAGTGTTGTCAGGTTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | TTAAACCTGACAACACTGGCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGAGGATACTCAGTGGAGTaGCCTGGCTCAGTTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: LNLTTLAEPCSIVHGEARGYSVE*PGSVPL Trigger: AAGTGGAACTGAGCCAGGCCACTCCACTGAGTATCC...TCTTGCTTCTCCATGCACTATACTACATGGCTCTGCCAGTGTTGTCAGGTTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR GCA 90 bp | TCTGAGCCCATTTCTACTGGAGCTTTGTTCCTAACTACCTCAGGTGAAGTCCTGAAAGTCAAAGGTAGCTaGAGCCTTCAGCAGCATTTG | + |
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Preference number: 4 (lower is better) Translates to: SEPISTGALFLTTSGEVLKVKGS*SLQQHL Trigger: CAAATGCTGCTGAAGGCTGCAGCTACCTTTGACTTT...CAGGACTTCACCTGAGGTAGTTAGGAACAAAGCTCCAGTAGAAATGGGCTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | AGGCACTTGTTGCTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCAAGCAAGGGGACAGTATTCTaGGAAGAATCTACTACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHLLLSYTPSPSFLRIASKGTVF*EESTTS Trigger: GGAGGTAGTAGATTCTTCCCAGAATACTGTCCCCTT...GCTTGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAGCAACAAGTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | CTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCAAGCAGCTATTTAAAATCCTTGGGAGTGGTGTaGAGAGGAACCAGCACCACA | + |
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Preference number: 4 (lower is better) Translates to: LSYTPSPSFLRIASSYLKSLGVV*RGTSTT Trigger: TGTGGTGCTGGTTCCTCTCCACACCACTCCCAAGGA...TTTTAAATAGCTGCTTGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | ACACTGGCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGATTACTTAGACCTCCTTCTCAACATCCTTaGGAGTGGTGTGGAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: TLAEPCSIVHGEARLLRPPSQHP*EWCGEE Trigger: TTCCTCTCCACACCACTCCCAAGGATGTTGAGAAGG...AGGTCTAAGTAATCTTGCTTCTCCATGCACTATACTACATGGCTCTGCCAGTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | TTAAACCTGACAACACTGGCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGACCTTCTCAACATCCTTaGGAGTGGTGTGGAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LNLTTLAEPCSIVHGEARPSQHP*EWCGEE Trigger: TTCCTCTCCACACCACTCCCAAGGATGTTGAGAAGG...TCTTGCTTCTCCATGCACTATACTACATGGCTCTGCCAGTGTTGTCAGGTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | TTGCTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCAAGCAGCTATTTACTCAGTGGAGTGGCCTaGCTCAGTTCCACTTCTACA | + |
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Preference number: 4 (lower is better) Translates to: LLSYTPSPSFLRIASSYLLSGVA*LSSTST Trigger: TGTAGAAGTGGAACTGAGCCAGGCCACTCCACTGAG...TAAATAGCTGCTTGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000114189.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR TCA 90 bp | TTGCTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCAAGCAGCTATTTATCAGTCTGTGGGCATTaGAGGCACAGATACGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: LLSYTPSPSFLRIASSYLSVCGH*RHRYER Trigger: CCTTTCGTATCTGTGCCTTCAATGCCCACAGACTGA...TAAATAGCTGCTTGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000114189.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR TCA 90 bp | ACACTGGCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGATTACTTAGACCTTCTTCCTCAGTCAGCTaGAACCTCTTGGGAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TLAEPCSIVHGEARLLRPSSSVS*NLLGKS Trigger: TGACTTTCCCAAGAGGTTTCAGCTGACTGAGGAAGA...AGGTCTAAGTAATCTTGCTTCTCCATGCACTATACTACATGGCTCTGCCAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR GCA 90 bp | ACACTGGCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGATTACTTAGACCTAACAAGGCCACGCATTaGTATGTGTGCATCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: TLAEPCSIVHGEARLLRPNKATH*YVCIRN Trigger: GTTCCTGATGCACACATAGCAATGCGTGGCCTTGTT...AGGTCTAAGTAATCTTGCTTCTCCATGCACTATACTACATGGCTCTGCCAGTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019232.10 ENSMUST00000239445.2 |
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| CDS-3UTR GCA 90 bp | TTGCTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCAAGCAGCTATTTATTTCCTTGTATGTGCTaGGCCCCAGCAATGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LLSYTPSPSFLRIASSYLFPCMC*APAMSC Trigger: ACAGCTCATTGCTGGGGCGCAGCACATACAAGGAAA...TAAATAGCTGCTTGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | GCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGATTACTTAGACCTAAGGTTCTAGGGAGAGTGAAATaGGCCACAAATGGTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: AEPCSIVHGEARLLRPKVLGRVK*ATNGSR Trigger: CCGAGAACCATTTGTGGCCCATTTCACTCTCCCTAG...AACCTTAGGTCTAAGTAATCTTGCTTCTCCATGCACTATACTACATGGCTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | CTGACAACACTGGCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGATTACTTAACCAGCACCACACTTaGAAGAGTTTTGCTAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LTTLAEPCSIVHGEARLLNQHHT*KSFARE Trigger: CTCCCTAGCAAAACTCTTCCAAGTGTGGTGCTGGTT...AAGTAATCTTGCTTCTCCATGCACTATACTACATGGCTCTGCCAGTGTTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | TTAAACCTGACAACACTGGCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGAAACCAGCACCACACTTaGAAGAGTTTTGCTAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LNLTTLAEPCSIVHGEARNQHHT*KSFARE Trigger: CTCCCTAGCAAAACTCTTCCAAGTGTGGTGCTGGTT...TCTTGCTTCTCCATGCACTATACTACATGGCTCTGCCAGTGTTGTCAGGTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | CTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCAAGCAGCTATTTAAAAGGATACTCAGTGGAGTaGCCTGGCTCAGTTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: LSYTPSPSFLRIASSYLKGYSVE*PGSVPL Trigger: AAGTGGAACTGAGCCAGGCCACTCCACTGAGTATCC...TTTTAAATAGCTGCTTGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000114189.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR TCA 90 bp | CTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCAAGCAGCTATTTAAAATCAGTCTGTGGGCATTaGAGGCACAGATACGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: LSYTPSPSFLRIASSYLKSVCGH*RHRYER Trigger: CCTTTCGTATCTGTGCCTTCAATGCCCACAGACTGA...TTTTAAATAGCTGCTTGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000114189.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR GCA 90 bp | CTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCAAGCAGCTATTTAAAATTTCCTTGTATGTGCTaGGCCCCAGCAATGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LSYTPSPSFLRIASSYLKFPCMC*APAMSC Trigger: ACAGCTCATTGCTGGGGCGCAGCACATACAAGGAAA...TTTTAAATAGCTGCTTGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR GCA 90 bp | ACACTGGCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGATTACTTAGACCTAAAGTCAAAGGTAGCTaGAGCCTTCAGCAGCATTTG | + |
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Preference number: 4 (lower is better) Translates to: TLAEPCSIVHGEARLLRPKVKGS*SLQQHL Trigger: CAAATGCTGCTGAAGGCTGCAGCTACCTTTGACTTT...AGGTCTAAGTAATCTTGCTTCTCCATGCACTATACTACATGGCTCTGCCAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | CTGACAACACTGGCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGATTACTTAAGGGGACAGTATTCTaGGAAGAATCTACTACCTCC | + |
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Preference number: 4 (lower is better) Translates to: LTTLAEPCSIVHGEARLLKGTVF*EESTTS Trigger: GGAGGTAGTAGATTCTTCCCAGAATACTGTCCCCTT...AAGTAATCTTGCTTCTCCATGCACTATACTACATGGCTCTGCCAGTGTTGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | GGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATCTTAGGTATGATCTCCTTGGGAGTGGTGTaGAGAGGAACCAGCACCACA | + |
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Preference number: 4 (lower is better) Translates to: GFSSMSSFVSVAEILGMISLGVV*RGTSTT Trigger: TGTGGTGCTGGTTCCTCTCCACACCACTCCCAAGGA...GATCATACCTAAGATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR GCA 90 bp | GCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGATTACTTAGACCTAAGGTTAAAGTCAAAGGTAGCTaGAGCCTTCAGCAGCATTTG | + |
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Preference number: 4 (lower is better) Translates to: AEPCSIVHGEARLLRPKVKVKGS*SLQQHL Trigger: CAAATGCTGCTGAAGGCTGCAGCTACCTTTGACTTT...AACCTTAGGTCTAAGTAATCTTGCTTCTCCATGCACTATACTACATGGCTCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | TACTTAGACCTAAGGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATTCCTTGGGAGTGGTGTaGAGAGGAACCAGCACCACA | + |
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Preference number: 4 (lower is better) Translates to: YLDLRFFQYELICISCRNSLGVV*RGTSTT Trigger: TGTGGTGCTGGTTCCTCTCCACACCACTCCCAAGGA...ATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACCTTAGGTCTAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR TCA 90 bp | GCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGATTACTTAGACCTAAGGTTGAATCTACTACCTCCTaGAGCACCATGATATCACAT | + |
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Preference number: 4 (lower is better) Translates to: AEPCSIVHGEARLLRPKVESTTS*STMISH Trigger: ATGTGATATCATGGTGCTTCAGGAGGTAGTAGATTC...AACCTTAGGTCTAAGTAATCTTGCTTCTCCATGCACTATACTACATGGCTCTGC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | CTGAGTTATACTCCCAGCCCTAGCTTTCTCAGAATAGCAAGCAGCTATTTAAAAAAGGGGACAGTATTCTaGGAAGAATCTACTACCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSYTPSPSFLRIASSYLKKGTVF*EESTTS Trigger: GGAGGTAGTAGATTCTTCCCAGAATACTGTCCCCTT...TTTTAAATAGCTGCTTGCTATTCTGAGAAAGCTAGGGCTGGGAGTATAACTCAG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | GCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGATTACTTAGACCTAAGGTTGAAATGGGCCACAAATaGTTCTCGGGCAAAAATATC | + |
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Preference number: 4 (lower is better) Translates to: AEPCSIVHGEARLLRPKVEMGHK*FSGKNI Trigger: GATATTTTTGCCCGAGAACCATTTGTGGCCCATTTC...AACCTTAGGTCTAAGTAATCTTGCTTCTCCATGCACTATACTACATGGCTCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | GGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATCTTAGGTATGATCCCTTCTCAACATCCTTaGGAGTGGTGTGGAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GFSSMSSFVSVAEILGMIPSQHP*EWCGEE Trigger: TTCCTCTCCACACCACTCCCAAGGATGTTGAGAAGG...GATCATACCTAAGATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | CTAAGGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATCTTAGGTATCTCAGTGGAGTGGCCTaGCTCAGTTCCACTTCTACA | + |
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Preference number: 4 (lower is better) Translates to: LRFFQYELICISCRNLRYLSGVA*LSSTST Trigger: TGTAGAAGTGGAACTGAGCCAGGCCACTCCACTGAG...ATACCTAAGATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACCTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | TACTTAGACCTAAGGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATGGATACTCAGTGGAGTaGCCTGGCTCAGTTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: YLDLRFFQYELICISCRNGYSVE*PGSVPL Trigger: AAGTGGAACTGAGCCAGGCCACTCCACTGAGTATCC...ATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACCTTAGGTCTAAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR TCA 90 bp | TACTTAGACCTAAGGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATTCAGTCTGTGGGCATTaGAGGCACAGATACGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: YLDLRFFQYELICISCRNSVCGH*RHRYER Trigger: CCTTTCGTATCTGTGCCTTCAATGCCCACAGACTGA...ATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACCTTAGGTCTAAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR GCA 90 bp | GGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATCTTAGGTATGATCAACAAGGCCACGCATTaGTATGTGTGCATCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: GFSSMSSFVSVAEILGMINKATH*YVCIRN Trigger: GTTCCTGATGCACACATAGCAATGCGTGGCCTTGTT...GATCATACCTAAGATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019232.10 ENSMUST00000239445.2 |
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| CDS-3UTR CCA 90 bp | TACTTAGACCTAAGGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATCTAGGGAGAGTGAAATaGGCCACAAATGGTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: YLDLRFFQYELICISCRNLGRVK*ATNGSR Trigger: CCGAGAACCATTTGTGGCCCATTTCACTCTCCCTAG...ATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACCTTAGGTCTAAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | GATTACTTAGACCTAAGGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAACCAGCACCACACTTaGAAGAGTTTTGCTAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: DYLDLRFFQYELICISCRNQHHT*KSFARE Trigger: CTCCCTAGCAAAACTCTTCCAAGTGTGGTGCTGGTT...TCTGCAACTGATACAAATGAGCTCATACTGGAAAAACCTTAGGTCTAAGTAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR TCA 90 bp | CTAAGGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATCTTAGGTATTCTTCCTCAGTCAGCTaGAACCTCTTGGGAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: LRFFQYELICISCRNLRYSSSVS*NLLGKS Trigger: TGACTTTCCCAAGAGGTTTCAGCTGACTGAGGAAGA...ATACCTAAGATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACCTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR TCA 90 bp | TACTTAGACCTAAGGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATTCTTCCTCAGTCAGCTaGAACCTCTTGGGAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: YLDLRFFQYELICISCRNSSSVS*NLLGKS Trigger: TGACTTTCCCAAGAGGTTTCAGCTGACTGAGGAAGA...ATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACCTTAGGTCTAAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | CTAAGGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATCTTAGGTATAACCAGCACCACACTTaGAAGAGTTTTGCTAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LRFFQYELICISCRNLRYNQHHT*KSFARE Trigger: CTCCCTAGCAAAACTCTTCCAAGTGTGGTGCTGGTT...ATACCTAAGATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACCTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR GCA 90 bp | TACTTAGACCTAAGGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATAAAGTCAAAGGTAGCTaGAGCCTTCAGCAGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLDLRFFQYELICISCRNKVKGS*SLQQHL Trigger: CAAATGCTGCTGAAGGCTGCAGCTACCTTTGACTTT...ATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACCTTAGGTCTAAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CCA 90 bp | CTAAGGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATCTTAGGTATAAGGGGACAGTATTCTaGGAAGAATCTACTACCTCC | + |
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Preference number: 4 (lower is better) Translates to: LRFFQYELICISCRNLRYKGTVF*EESTTS Trigger: GGAGGTAGTAGATTCTTCCCAGAATACTGTCCCCTT...ATACCTAAGATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACCTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS CCA 90 bp | GTACTGGCCCGCACTGTAGTATCCTCCCCATCAGGAATCACCCAGTaGAAGCCTGCCTTAGTCCGGAGTAGCAGGCTTTTCAGACGTTTT | + |
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Preference number: 5 (lower is better) Translates to: VLARTVVSSPSGITQ*KPALVRSSRLFRRF Trigger: AAAACGTCTGAAAAGCCTGCTACTCCGGACTAAGGCAGGCTTCCACTGGGTGATTCCTGATGGGGAGGATACTACAGTGCGGGCCAGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS GCA 90 bp | ACCAACCAGGAGAATGAGCAGGGGAGCCATAACAAGGCCACGCATTaGTATGTGTGCATCAGGAACCCTCCAAAGGAATCCAGGTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: TNQENEQGSHNKATH*YVCIRNPPKESRLS Trigger: GGACAACCTGGATTCCTTTGGAGGGTTCCTGATGCACACATAGCAATGCGTGGCCTTGTTATGGCTCCCCTGCTCATTCTCCTGGTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019232.10 ENSMUST00000239445.2 |
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| CDS TCA 90 bp | TCACTGACTCCTTGGTTAGCTTGGCCAGTGTCAGTCTGTGGGCATTaGAGGCACAGATACGAAAGGCTTCAGTCCCACCAACCAGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: SLTPWLAWPVSVCGH*RHRYERLQSHQPGE Trigger: TTCTCCTGGTTGGTGGGACTGAAGCCTTTCGTATCTGTGCCTTCAATGCCCACAGACTGACACTGGCCAAGCTAACCAAGGAGTCAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000114189.10 ENSMUST00000119361.4 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS GCA 90 bp | CTCTTCCTCAGTCAGCTGAAACCTCTTGGGAAAGTCAAAGGTAGCTaGAGCCTTCAGCAGCATTTGGCAGCCCTGTCCATGCACCACAAT | + |
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Preference number: 5 (lower is better) Translates to: LFLSQLKPLGKVKGS*SLQQHLAALSMHHN Trigger: ATTGTGGTGCATGGACAGGGCTGCCAAATGCTGCTGAAGGCTGCAGCTACCTTTGACTTTCCCAAGAGGTTTCAGCTGACTGAGGAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS CCA 90 bp | CTCAACATCCTTGGGAGTGGTGTGGAGAGGAACCAGCACCACACTTaGAAGAGTTTTGCTAGGGAGAGTGAAATGGGCCACAAATGGTTC | + |
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Preference number: 5 (lower is better) Translates to: LNILGSGVERNQHHT*KSFARESEMGHKWF Trigger: GAACCATTTGTGGCCCATTTCACTCTCCCTAGCAAAACTCTTCCAAGTGTGGTGCTGGTTCCTCTCCACACCACTCCCAAGGATGTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS CCA 90 bp | CCAGAAACACATCATAGAGGGCATTCAGCTCCTTCTCAACATCCTTaGGAGTGGTGTGGAGAGGAACCAGCACCACACTTGGAAGAGTTT | + |
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Preference number: 5 (lower is better) Translates to: PETHHRGHSAPSQHP*EWCGEEPAPHLEEF Trigger: AAACTCTTCCAAGTGTGGTGCTGGTTCCTCTCCACACCACTCCCAAGGATGTTGAGAAGGAGCTGAATGCCCTCTATGATGTGTTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CAA 90 bp | TCTGAGCCCATTTCTACTGGAGCTTTGTTCCTAACTACCTCAGGTGAAGTCCTGTACACATACTTTTCCTaGTATGTGCTGCGCCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SEPISTGALFLTTSGEVLYTYFS*YVLRPS Trigger: GCTGGGGCGCAGCACATACAAGGAAAAGTATGTGTA...CAGGACTTCACCTGAGGTAGTTAGGAACAAAGCTCCAGTAGAAATGGGCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS CCA 90 bp | GGAACCAGCACCACACTTGGAAGAGTTTTGCTAGGGAGAGTGAAATaGGCCACAAATGGTTCTCGGGCAAAAATATCATCTGTGTCGTTG | + |
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Preference number: 5 (lower is better) Translates to: GTSTTLGRVLLGRVK*ATNGSRAKISSVSL Trigger: CAACGACACAGATGATATTTTTGCCCGAGAACCATTTGTGGCCCATTTCACTCTCCCTAGCAAAACTCTTCCAAGTGTGGTGCTGGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS TCA 90 bp | AGCGATGCACAGTCTGCATTGAAGTCTCCAAGCAGAATCACATTCTaGACTAAGGTATCCATCACTGACTCCTTGGTTAGCTTGGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: SDAQSALKSPSRITF*TKVSITDSLVSLAS Trigger: ACTGGCCAAGCTAACCAAGGAGTCAGTGATGGATACCTTAGTTCAGAATGTGATTCTGCTTGGAGACTTCAATGCAGACTGTGCATCGCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119361.4 |
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| CDS GCA 90 bp | GTGTCTTGTCAGACCTGTAGATATACACATACTTTTCCTTGTATGTaGTGCGCCCCAGCAATGAGCTGTTTAGGAAGCTGTAACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSCQTCRYTHTFPCM*CAPAMSCLGSCNSW Trigger: CCAGGAGTTACAGCTTCCTAAACAGCTCATTGCTGGGGCGCAGCACATACAAGGAAAAGTATGTGTATATCTACAGGTCTGACAAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CAA 90 bp | ACACTGGCAGAGCCATGTAGTATAGTGCATGGAGAAGCAAGATTACTTAGACCTTACACATACTTTTCCTaGTATGTGCTGCGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLAEPCSIVHGEARLLRPYTYFS*YVLRPS Trigger: GCTGGGGCGCAGCACATACAAGGAAAAGTATGTGTA...AGGTCTAAGTAATCTTGCTTCTCCATGCACTATACTACATGGCTCTGCCAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CAA 90 bp | GGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATCTTAGGTATGATCTACACATACTTTTCCTaGTATGTGCTGCGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GFSSMSSFVSVAEILGMIYTYFS*YVLRPS Trigger: GCTGGGGCGCAGCACATACAAGGAAAAGTATGTGTA...GATCATACCTAAGATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CAA 90 bp | TACTTAGACCTAAGGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAAATTACACATACTTTTCCTaGTATGTGCTGCGCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YLDLRFFQYELICISCRNYTYFS*YVLRPS Trigger: GCTGGGGCGCAGCACATACAAGGAAAAGTATGTGTA...ATTTCTGCAACTGATACAAATGAGCTCATACTGGAAAAACCTTAGGTCTAAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS-3UTR CAA 90 bp | GATTACTTAGACCTAAGGTTTTTCCAGTATGAGCTCATTTGTATCAGTTGCAGAGATGCACAGTCTGCATaGAAGTCTCCAAGCAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: DYLDLRFFQYELICISCRDAQSA*KSPSRI Trigger: GATTCTGCTTGGAGACTTCAATGCAGACTGTGCATC...TCTGCAACTGATACAAATGAGCTCATACTGGAAAAACCTTAGGTCTAAGTAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS CCA 72 bp | CGCACTGTAGTATCCTCCCCATCAGGAATCACCCAGTaGAAGCCTGCCTTAGTCCGGAGTAGCAGGCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RTVVSSPSGITQ*KPALVRSSRLF Trigger: GAAAAGCCTGCTACTCCGGACTAAGGCAGGCTTCCACTGGGTGATTCCTGATGGGGAGGATACTACAGTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS CCA 72 bp | CTTGGGAGTGGTGTGGAGAGGAACCAGCACCACACTTaGAAGAGTTTTGCTAGGGAGAGTGAAATGGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LGSGVERNQHHT*KSFARESEMGH Trigger: GTGGCCCATTTCACTCTCCCTAGCAAAACTCTTCCAAGTGTGGTGCTGGTTCCTCTCCACACCACTCCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS CCA 72 bp | AGAGGGCATTCAGCTCCTTCTCAACATCCTTGGGAGTaGTGTGGAGAGGAACCAGCACCACACTTGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RGHSAPSQHPWE*CGEEPAPHLEE Trigger: CTCTTCCAAGTGTGGTGCTGGTTCCTCTCCACACCACTCCCAAGGATGTTGAGAAGGAGCTGAATGCCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS CCA 72 bp | GAGCGGCTAAGTAGTGGGGTGGGATACTCAGTGGAGTaGCCTGGCTCAGTTCCACTTCTACAGGATAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: ERLSSGVGYSVE*PGSVPLLQDNG Trigger: ACCATTATCCTGTAGAAGTGGAACTGAGCCAGGCCACTCCACTGAGTATCCCACCCCACTACTTAGCCGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000114189.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS GCA 72 bp | AGTCAGCTGAAACCTCTTGGGAAAGTCAAAGGTAGCTaGAGCCTTCAGCAGCATTTGGCAGCCCTGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SQLKPLGKVKGS*SLQQHLAALSM Trigger: CATGGACAGGGCTGCCAAATGCTGCTGAAGGCTGCAGCTACCTTTGACTTTCCCAAGAGGTTTCAGCTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS CAA 90 bp | ATCACTGACTCCTTGGTTAGCTTGGCCAGTGTCAGTCTGTGGGCATaGAAGGCACAGATACGAAAGGCTTCAGTCCCACCAACCAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: ITDSLVSLASVSLWA*KAQIRKASVPPTRR Trigger: TCTCCTGGTTGGTGGGACTGAAGCCTTTCGTATCTGTGCCTTCAATGCCCACAGACTGACACTGGCCAAGCTAACCAAGGAGTCAGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000114189.10 ENSMUST00000119361.4 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS CAA 72 bp | GTGTGGAGAGGAACCAGCACCACACTTGGAAGAGTTTaGCTAGGGAGAGTGAAATGGGCCACAAATGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VWRGTSTTLGRV*LGRVKWATNGS Trigger: AGAACCATTTGTGGCCCATTTCACTCTCCCTAGCAAAACTCTTCCAAGTGTGGTGCTGGTTCCTCTCCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS GCA 72 bp | ACCTGTAGATATACACATACTTTTCCTTGTATGTGCTaGGCCCCAGCAATGAGCTGTTTAGGAAGCTGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: TCRYTHTFPCMC*APAMSCLGSCN Trigger: GTTACAGCTTCCTAAACAGCTCATTGCTGGGGCGCAGCACATACAAGGAAAAGTATGTGTATATCTACAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS CCA 72 bp | ACCACACTTGGAAGAGTTTTGCTAGGGAGAGTGAAATaGGCCACAAATGGTTCTCGGGCAAAAATATCATCT | + |
|
Preference number: 6 (lower is better) Translates to: TTLGRVLLGRVK*ATNGSRAKISS Trigger: AGATGATATTTTTGCCCGAGAACCATTTGTGGCCCATTTCACTCTCCCTAGCAAAACTCTTCCAAGTGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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| CDS CCA 72 bp | AAGAGTTTTGCTAGGGAGAGTGAAATGGGCCACAAATaGTTCTCGGGCAAAAATATCATCTGTGTCGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: KSFARESEMGHK*FSGKNIICVVV Trigger: TACAACGACACAGATGATATTTTTGCCCGAGAACCATTTGTGGCCCATTTCACTCTCCCTAGCAAAACTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019232.10 ENSMUST00000075821.10 ENSMUST00000239445.2 ENSMUST00000239458.2 |
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