Pregenerated sensors for DNALI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042707Ensembl transcript IDs: ENSMUST00000036383.4
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGACATCAGGCAAGGTTTGGAGGCAGGAGTGCTGCTAGGCACCGATaGTTTCCTGCACCGCCCACAGAGCCTGTGGCACGACGGGAACAT | + |
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Preference number: 1 (lower is better) Translates to: RHQARFGGRSAARHR*FPAPPTEPVARREH Trigger: ATGTTCCCGTCGTGCCACAGGCTCTGTGGGCGGTGCAGGAAAGCATCGGTGCCTAGCAGCACTCCTGCCTCCAAACCTTGCCTGATGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR CCA 90 bp | GGGAGTGTGGAGTCAGGCTTTGCTATCCAGCAGAAGGTATTCAAATaGTGTGGGGAGGACCTGGGTGCAGACAGCTCTCAAGACACTGGG | + |
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Preference number: 1 (lower is better) Translates to: GSVESGFAIQQKVFK*CGEDLGADSSQDTG Trigger: CCCAGTGTCTTGAGAGCTGTCTGCACCCAGGTCCTCCCCACACCATTTGAATACCTTCTGCTGGATAGCAAAGCCTGACTCCACACTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR CCA 90 bp | TGTGGAGTCAGGCTTTGCTATCCAGCAGAAGGTATTCAAATGGTGTaGGGAGGACCTGGGTGCAGACAGCTCTCAAGACACTGGGACTTT | + |
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Preference number: 1 (lower is better) Translates to: CGVRLCYPAEGIQMV*GGPGCRQLSRHWDF Trigger: AAAGTCCCAGTGTCTTGAGAGCTGTCTGCACCCAGGTCCTCCCCACACCATTTGAATACCTTCTGCTGGATAGCAAAGCCTGACTCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR TCA 90 bp | TCCCACCTTCCATTGCCTAGCCAGGAACCTGGCTTAGGTGTTTCATaGCTCTGGGACAACAGTTGTAACAATGACATGAGTGGTGACCAG | + |
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Preference number: 1 (lower is better) Translates to: SHLPLPSQEPGLGVS*LWDNSCNNDMSGDQ Trigger: CTGGTCACCACTCATGTCATTGTTACAACTGTTGTCCCAGAGTCATGAAACACCTAAGCCAGGTTCCTGGCTAGGCAATGGAAGGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR GCA 90 bp | TTGGGATACAGTCAACTCAGAACAGCCGTTGGGGTTCATAGGCCTTaGAGTAAGCTTAGACTGGGATGGAGGTCAGAGCTGCAGTTTTCA | + |
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Preference number: 1 (lower is better) Translates to: LGYSQLRTAVGVHRP*SKLRLGWRSELQFS Trigger: TGAAAACTGCAGCTCTGACCTCCATCCCAGTCTAAGCTTACTGCAAGGCCTATGAACCCCAACGGCTGTTCTGAGTTGACTGTATCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR CCA 90 bp | ACAGCCGTTGGGGTTCATAGGCCTTGCAGTAAGCTTAGACTGGGATaGAGGTCAGAGCTGCAGTTTTCAGGATCTACAAATTTGCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: TAVGVHRPCSKLRLG*RSELQFSGSTNLPS Trigger: TGAAGGCAAATTTGTAGATCCTGAAAACTGCAGCTCTGACCTCCATCCCAGTCTAAGCTTACTGCAAGGCCTATGAACCCCAACGGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR CCA 90 bp | TCAGAACAGCCGTTGGGGTTCATAGGCCTTGCAGTAAGCTTAGACTaGGATGGAGGTCAGAGCTGCAGTTTTCAGGATCTACAAATTTGC | + |
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Preference number: 1 (lower is better) Translates to: SEQPLGFIGLAVSLD*DGGQSCSFQDLQIC Trigger: GCAAATTTGTAGATCCTGAAAACTGCAGCTCTGACCTCCATCCCAGTCTAAGCTTACTGCAAGGCCTATGAACCCCAACGGCTGTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR GCA 90 bp | GACTGGGATGGAGGTCAGAGCTGCAGTTTTCAGGATCTACAAATTTaGCTTCAGTCCATAATTCATCTAGAACTACATGTGAGATGTGGG | + |
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Preference number: 1 (lower is better) Translates to: DWDGGQSCSFQDLQI*LQSIIHLELHVRCG Trigger: CCCACATCTCACATGTAGTTCTAGATGAATTATGGACTGAAGGCAAATTTGTAGATCCTGAAAACTGCAGCTCTGACCTCCATCCCAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR CAA 90 bp | GTGGGGAGGACCTGGGTGCAGACAGCTCTCAAGACACTGGGACTTTaGTACCTCTCAGTGAGCATGGCTTTGACTCTGCTGCTGTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: VGRTWVQTALKTLGL*YLSVSMALTLLLFS Trigger: GGAAAACAGCAGCAGAGTCAAAGCCATGCTCACTGAGAGGTACAAAAGTCCCAGTGTCTTGAGAGCTGTCTGCACCCAGGTCCTCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR-3UTR TCA 90 bp | CACTTGGGAAGCTTAGTGGTGAGGGCGCACCCCAGTTCTGTGGCAACAGGAAGTGTTGTAACAATGACATaGGTGGTGACCAGGGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: HLGSLVVRAHPSSVATGSVVTMT*VVTREG Trigger: CCCTTCCCTGGTCACCACTCATGTCATTGTTACAAC...ACTTCCTGTTGCCACAGAACTGGGGTGCGCCCTCACCACTAAGCTTCCCAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGGTGAGGCTAGAGAAGCCCAAGGTACAAGGTGAGCTGGAAACTGAACTTCAAAGGTGGTCTCTTTaGGGAAACACTTGCTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: GRVRLEKPKVQGELETELQRWSL*GNTCSL Trigger: TAGGGAGCAAGTGTTTCCTCAAAGAGACCACCTTTG...AAGTTCAGTTTCCAGCTCACCTTGTACCTTGGGCTTCTCTAGCCTCACCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTGCTATCCAGCAGAAGGTATTCAAATGGTGTGGGGAGGACCTGGGTGCAATTAGAGAGGTGATGTaGAAGGGTGAGGCTAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: GFAIQQKVFKWCGEDLGAIREVM*KGEARE Trigger: TTCTCTAGCCTCACCCTTCCACATCACCTCTCTAAT...TGCACCCAGGTCCTCCCCACACCATTTGAATACCTTCTGCTGGATAGCAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR CAA 90 bp | AACAGTTGTAACAATGACATGAGTGGTGACCAGGGAAGGGGTGGCTaGTTCACTCTGGAAACTGGCTTTTATTACAATGGGCTTATGGGG | + |
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Preference number: 2 (lower is better) Translates to: NSCNNDMSGDQGRGG*FTLETGFYYNGLMG Trigger: CCCCATAAGCCCATTGTAATAAAAGCCAGTTTCCAGAGTGAACAAGCCACCCCTTCCCTGGTCACCACTCATGTCATTGTTACAACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR-3UTR CCA 90 bp | TACATTAGAGAGGTGATGTGGAAGGGTGAGGCTAGAGAAGCCCAAGGTACAAGGGTGGCTTGTTCACTCTaGAAACTGGCTTTTATTACA | + |
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Preference number: 2 (lower is better) Translates to: YIREVMWKGEAREAQGTRVACSL*KLAFIT Trigger: TGTAATAAAAGCCAGTTTCCAGAGTGAACAAGCCAC...CCTTGTACCTTGGGCTTCTCTAGCCTCACCCTTCCACATCACCTCTCTAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR-3UTR GCA 90 bp | GCCCTTAGTTCCTCCAGCATGTCTTGTGTGTGTCTACAGACATGCATGTTCCTCCAGGATCTACAAATTTaGCTTCAGTCCATAATTCAT | + |
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Preference number: 2 (lower is better) Translates to: ALSSSSMSCVCLQTCMFLQDLQI*LQSIIH Trigger: ATGAATTATGGACTGAAGGCAAATTTGTAGATCCTG...GAGGAACATGCATGTCTGTAGACACACACAAGACATGCTGGAGGAACTAAGGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR-3UTR CCA 90 bp | AAGGTACAAGGTGAGCTGGAAACTGAACTTGATGCAAAGGTGGTCTCTTTGAGGGTTCACTCTGGAAACTaGCTTTTATTACAATGGGCT | + |
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Preference number: 2 (lower is better) Translates to: KVQGELETELDAKVVSLRVHSGN*LLLQWA Trigger: AGCCCATTGTAATAAAAGCCAGTTTCCAGAGTGAAC...CCTCAAAGAGACCACCTTTGCATCAAGTTCAGTTTCCAGCTCACCTTGTACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR GCA 72 bp | GCAAGGTTTGGAGGCAGGAGTGCTGCTAGGCACCGATaGTTTCCTGCACCGCCCACAGAGCCTGTGGCACGA | + |
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Preference number: 3 (lower is better) Translates to: ARFGGRSAARHR*FPAPPTEPVAR Trigger: TCGTGCCACAGGCTCTGTGGGCGGTGCAGGAAAGCATCGGTGCCTAGCAGCACTCCTGCCTCCAAACCTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR CCA 72 bp | GGCACCGATGCTTTCCTGCACCGCCCACAGAGCCTGTaGCACGACGGGAACATGGCTTCACCGACAGGTTGT | + |
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Preference number: 3 (lower is better) Translates to: GTDAFLHRPQSL*HDGNMASPTGC Trigger: ACAACCTGTCGGTGAAGCCATGTTCCCGTCGTGCCACAGGCTCTGTGGGCGGTGCAGGAAAGCATCGGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR-3UTR CAA 90 bp | GGCTTTGCTATCCAGCAGAAGGTATTCAAATGGTGTGGGGAGGACCTGGGTGCATTCTCCCACCTTCCATaGCCTAGCCAGGAACCTGGC | + |
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Preference number: 3 (lower is better) Translates to: GFAIQQKVFKWCGEDLGAFSHLP*PSQEPG Trigger: GCCAGGTTCCTGGCTAGGCAATGGAAGGTGGGAGAA...TGCACCCAGGTCCTCCCCACACCATTTGAATACCTTCTGCTGGATAGCAAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR CCA 72 bp | GAGATGACAAAGCCCCAGGCCAATTTAAGCTGCACATaGACACCGGGTTCTCCCACCTTCCATTGCCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: EMTKPQANLSCT*TPGSPTFHCLA Trigger: GGCTAGGCAATGGAAGGTGGGAGAACCCGGTGTCCATGTGCAGCTTAAATTGGCCTGGGGCTTTGTCATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR GCA 72 bp | AGTCAACTCAGAACAGCCGTTGGGGTTCATAGGCCTTaGAGTAAGCTTAGACTGGGATGGAGGTCAGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: SQLRTAVGVHRP*SKLRLGWRSEL Trigger: CAGCTCTGACCTCCATCCCAGTCTAAGCTTACTGCAAGGCCTATGAACCCCAACGGCTGTTCTGAGTTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR TCA 72 bp | CTCCGAAACGAGGTGCAGAAGCTTACATTAGAGAGGTaGTGTGGAAGGGTGAGGCTAGAGAAGCCCAAGGTA | + |
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Preference number: 3 (lower is better) Translates to: LRNEVQKLTLER*CGRVRLEKPKV Trigger: TACCTTGGGCTTCTCTAGCCTCACCCTTCCACATCACCTCTCTAATGTAAGCTTCTGCACCTCGTTTCGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR CCA 72 bp | CCGTTGGGGTTCATAGGCCTTGCAGTAAGCTTAGACTaGGATGGAGGTCAGAGCTGCAGTTTTCAGGATCTA | + |
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Preference number: 3 (lower is better) Translates to: PLGFIGLAVSLD*DGGQSCSFQDL Trigger: TAGATCCTGAAAACTGCAGCTCTGACCTCCATCCCAGTCTAAGCTTACTGCAAGGCCTATGAACCCCAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR-3UTR CAA 90 bp | GCTATAGTCCAAAACCAAACTCCGAAACGAGGTGCAGAAGCTTACATTAGAGAGCAGGGAAGGGGTGGCTaGTTCACTCTGGAAACTGGC | + |
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Preference number: 3 (lower is better) Translates to: AIVQNQTPKRGAEAYIREQGRGG*FTLETG Trigger: GCCAGTTTCCAGAGTGAACAAGCCACCCCTTCCCTG...CTCTCTAATGTAAGCTTCTGCACCTCGTTTCGGAGTTTGGTTTTGGACTATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR-3UTR CAA 90 bp | CAGCAGAAGGTATTCAAATGGTGTGGGGAGGACCTGGGTGCAGACAGCTCTCAAAGCTGGAAACTGAACTaGATGCAAAGGTGGTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: QQKVFKWCGEDLGADSSQSWKLN*MQRWSL Trigger: AAGAGACCACCTTTGCATCAAGTTCAGTTTCCAGCT...TTGAGAGCTGTCTGCACCCAGGTCCTCCCCACACCATTTGAATACCTTCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR CCA 72 bp | AAACGAGGTGCAGAAGCTTACATTAGAGAGGTGATGTaGAAGGGTGAGGCTAGAGAAGCCCAAGGTACAAGG | + |
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Preference number: 3 (lower is better) Translates to: KRGAEAYIREVM*KGEAREAQGTR Trigger: CCTTGTACCTTGGGCTTCTCTAGCCTCACCCTTCCACATCACCTCTCTAATGTAAGCTTCTGCACCTCGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR TCA 72 bp | CCATTGCCTAGCCAGGAACCTGGCTTAGGTGTTTCATaGCTCTGGGACAACAGTTGTAACAATGACATGAGT | + |
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Preference number: 3 (lower is better) Translates to: PLPSQEPGLGVS*LWDNSCNNDMS Trigger: ACTCATGTCATTGTTACAACTGTTGTCCCAGAGTCATGAAACACCTAAGCCAGGTTCCTGGCTAGGCAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR GCA 72 bp | CTTGCAGTAAGCTTAGACTGGGATGGAGGTCAGAGCTaGAGTTTTCAGGATCTACAAATTTGCCTTCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: LAVSLDWDGGQS*SFQDLQICLQS Trigger: GGACTGAAGGCAAATTTGTAGATCCTGAAAACTGCAGCTCTGACCTCCATCCCAGTCTAAGCTTACTGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR GCA 72 bp | AAAAATATGCCATTAGGAACTGTGTTCGCTTTCTTGTaGCCAGTTGGCATCTCTAAGGCACAGCACACTTGG | + |
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Preference number: 3 (lower is better) Translates to: KNMPLGTVFAFL*PVGISKAQHTW Trigger: CCAAGTGTGCTGTGCCTTAGAGATGCCAACTGGGCACAAGAAAGCGAACACAGTTCCTAATGGCATATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR GCA 72 bp | GGAGGTCAGAGCTGCAGTTTTCAGGATCTACAAATTTaGCTTCAGTCCATAATTCATCTAGAACTACATGTG | + |
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Preference number: 3 (lower is better) Translates to: GGQSCSFQDLQI*LQSIIHLELHV Trigger: CACATGTAGTTCTAGATGAATTATGGACTGAAGGCAAATTTGTAGATCCTGAAAACTGCAGCTCTGACCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR GCA 90 bp | TCCAGCAGAAGGTATTCAAATGGTGTGGGGAGGACCTGGGTGCAGACAGCTCTCTGCGCACAGGGCAGATaGCTGTCTCCCTGGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SSRRYSNGVGRTWVQTALCAQGR*LSPWPA Trigger: GGCAGGCCAGGGAGACAGGCATCTGCCCTGTGCGCA...GAGAGCTGTCTGCACCCAGGTCCTCCCCACACCATTTGAATACCTTCTGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR GCA 90 bp | TTGGCATCTCTAAGGCACAGCACACTTGGGAAGCTTAGTGGTGAGGGCGCACCCTTCTGGTGCTGGGTGTaGTGGACACCTGCTGGATCC | + |
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Preference number: 4 (lower is better) Translates to: LASLRHSTLGKLSGEGAPFWCWV*WTPAGS Trigger: GGATCCAGCAGGTGTCCAGCACACCCAGCACCAGAA...GGGTGCGCCCTCACCACTAAGCTTCCCAAGTGTGCTGTGCCTTAGAGATGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR GCA 90 bp | GGGAACATGGCTTCACCGACAGGTTGTGCTAATGGAGGCCTAGTTCCTCAGGATCTGGCCTGCCTCTGCTaGAGCTTCAGGTCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GNMASPTGCANGGLVPQDLACLC*SFRSSC Trigger: GCAGCTGGACCTGAAGCTGCAGCAGAGGCAGGCCAG...ATCCTGAGGAACTAGGCCTCCATTAGCACAACCTGTCGGTGAAGCCATGTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR GCA 90 bp | TTGGCATCTCTAAGGCACAGCACACTTGGGAAGCTTAGTGGTGAGGGCGCACCCGCAGTGCCTTCCTCATaGCAAATGCCACGCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LASLRHSTLGKLSGEGAPAVPSS*QMPRCS Trigger: AGAGCAGCGTGGCATTTGGCATGAGGAAGGCACTGC...GGGTGCGCCCTCACCACTAAGCTTCCCAAGTGTGCTGTGCCTTAGAGATGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CCA 90 bp | CACTTGGGAAGCTTAGTGGTGAGGGCGCACCCCAGTTCTGTGGCAACAGGAAGTCATCCATTCTGGTGCTaGGTGTGCTGGACACCTGCT | + |
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Preference number: 4 (lower is better) Translates to: HLGSLVVRAHPSSVATGSHPFWC*VCWTPA Trigger: AGCAGGTGTCCAGCACACCCAGCACCAGAATGGATG...ACTTCCTGTTGCCACAGAACTGGGGTGCGCCCTCACCACTAAGCTTCCCAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR TCA 90 bp | ACCAGGGAAGGGGTGGCTTGTTCACTCTGGAAACTGGCTTTTATTACAATGGGCCAGGCTGCTGGATGGTaGCTTTCAGTGGCCGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: TREGVACSLWKLAFITMGQAAGW*LSVAEP Trigger: CGGCTCGGCCACTGAAAGTCACCATCCAGCAGCCTG...GCCCATTGTAATAAAAGCCAGTTTCCAGAGTGAACAAGCCACCCCTTCCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR GCA 90 bp | CAGCAGAAGGTATTCAAATGGTGTGGGGAGGACCTGGGTGCAGACAGCTCTCAACAGCAGCCCTCTCTCTaGGCAGTTGATGGTGACCTC | + |
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Preference number: 4 (lower is better) Translates to: QQKVFKWCGEDLGADSSQQQPSL*AVDGDL Trigger: GAGGTCACCATCAACTGCGCAGAGAGAGGGCTGCTG...TTGAGAGCTGTCTGCACCCAGGTCCTCCCCACACCATTTGAATACCTTCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CCA 90 bp | GCCCTTAGTTCCTCCAGCATGTCTTGTGTGTGTCTACAGACATGCATGTTCCTCGATGGTGACTTTCAGTaGCCGAGCCGTGGGGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: ALSSSSMSCVCLQTCMFLDGDFQ*PSRGAP Trigger: CGGAGCCCCACGGCTCGGCCACTGAAAGTCACCATC...GAGGAACATGCATGTCTGTAGACACACACAAGACATGCTGGAGGAACTAAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CCA 90 bp | TCAGAACAGCCGTTGGGGTTCATAGGCCTTGCAGTAAGCTTAGACTGGGATGGAAGGGCAGCTTGGCCTTaGGTGGCTGTGGGCTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: SEQPLGFIGLAVSLDWDGRAAWP*VAVGLY Trigger: GTACAAGCCCACAGCCACCCAAGGCCAAGCTGCCCT...TCCATCCCAGTCTAAGCTTACTGCAAGGCCTATGAACCCCAACGGCTGTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR TCA 90 bp | GGCTTTGCTATCCAGCAGAAGGTATTCAAATGGTGTGGGGAGGACCTGGGTGCATTTCCTCTCCATGTCTaGCTTCCCCTGTTCGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GFAIQQKVFKWCGEDLGAFPLHV*LPLFGL Trigger: CAGGCCGAACAGGGGAAGTCAGACATGGAGAGGAAA...TGCACCCAGGTCCTCCCCACACCATTTGAATACCTTCTGCTGGATAGCAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR GCA 90 bp | TCAGAACAGCCGTTGGGGTTCATAGGCCTTGCAGTAAGCTTAGACTGGGATGGATTCCCCTGTTCGGCCTaGAGTGCCTTCCTCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: SEQPLGFIGLAVSLDWDGFPCSA*SAFLMP Trigger: TGGCATGAGGAAGGCACTGCAGGCCGAACAGGGGAA...TCCATCCCAGTCTAAGCTTACTGCAAGGCCTATGAACCCCAACGGCTGTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CCA 90 bp | ACCAGGGAAGGGGTGGCTTGTTCACTCTGGAAACTGGCTTTTATTACAATGGGCGGCCTTGGGTGGCTGTaGGCTTGTACTAGAGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: TREGVACSLWKLAFITMGGLGWL*ACTRGS Trigger: GGACCCTCTAGTACAAGCCCACAGCCACCCAAGGCC...GCCCATTGTAATAAAAGCCAGTTTCCAGAGTGAACAAGCCACCCCTTCCCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CCA 90 bp | GGCTTTGCTATCCAGCAGAAGGTATTCAAATGGTGTGGGGAGGACCTGGGTGCACAGCTTGGCCTTGGGTaGCTGTGGGCTTGTACTAGA | + |
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Preference number: 4 (lower is better) Translates to: GFAIQQKVFKWCGEDLGAQLGLG*LWACTR Trigger: TCTAGTACAAGCCCACAGCCACCCAAGGCCAAGCTG...TGCACCCAGGTCCTCCCCACACCATTTGAATACCTTCTGCTGGATAGCAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CCA 90 bp | GCATCTCTAAGGCACAGCACACTTGGGAAGCTTAGTGGTGAGGGCGCACCCCAGATAATGCCTTCCAGTTaGGCCTTCAGTTGCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: ASLRHSTLGKLSGEGAPQIMPSS*AFSCWL Trigger: CAACCAGCAACTGAAGGCCCAACTGGAAGGCATTAT...CTGGGGTGCGCCCTCACCACTAAGCTTCCCAAGTGTGCTGTGCCTTAGAGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR TCA 90 bp | ACCAGGGAAGGGGTGGCTTGTTCACTCTGGAAACTGGCTTTTATTACAATGGGCCCGGGGTGTCATATTTaGGCAGAGAGTCTGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TREGVACSLWKLAFITMGPGCHI*AESLLG Trigger: CCCCAGCAGACTCTCTGCTCAAATATGACACCCCGG...GCCCATTGTAATAAAAGCCAGTTTCCAGAGTGAACAAGCCACCCCTTCCCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CCA 90 bp | ACCAGGGAAGGGGTGGCTTGTTCACTCTGGAAACTGGCTTTTATTACAATGGGCGAGGGTCCAGGCTGCTaGATGGTGACTTTCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: TREGVACSLWKLAFITMGEGPGC*MVTFSG Trigger: GCCACTGAAAGTCACCATCCAGCAGCCTGGACCCTC...GCCCATTGTAATAAAAGCCAGTTTCCAGAGTGAACAAGCCACCCCTTCCCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CCA 90 bp | GGGAACATGGCTTCACCGACAGGTTGTGCTAATGGAGGCCTAGTTCCTCAGGATGTGCTGGACACCTGCTaGATCCATAGCTGTGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GNMASPTGCANGGLVPQDVLDTC*IHSCVS Trigger: AGACACACAGCTATGGATCCAGCAGGTGTCCAGCAC...ATCCTGAGGAACTAGGCCTCCATTAGCACAACCTGTCGGTGAAGCCATGTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CCA 90 bp | TCAGAACAGCCGTTGGGGTTCATAGGCCTTGCAGTAAGCTTAGACTGGGATGGATGGTGCTGGGTGTGCTaGACACCTGCTGGATCCATA | + |
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Preference number: 4 (lower is better) Translates to: SEQPLGFIGLAVSLDWDGWCWVC*TPAGSI Trigger: TATGGATCCAGCAGGTGTCCAGCACACCCAGCACCA...TCCATCCCAGTCTAAGCTTACTGCAAGGCCTATGAACCCCAACGGCTGTTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CCA 90 bp | AACTCAGAACAGCCGTTGGGGTTCATAGGCCTTGCAGTAAGCTTAGACTGGGATTCTCCCGCTTCTCGGTaGCCTCGCATTTCGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSEQPLGFIGLAVSLDWDSPASR*PRISPS Trigger: AGAAGGCGAAATGCGAGGCCACCGAGAAGCGGGAGA...ATCCCAGTCTAAGCTTACTGCAAGGCCTATGAACCCCAACGGCTGTTCTGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR CAA 72 bp | ACCTGGGTGCAGACAGCTCTCAAGACACTGGGACTTTaGTACCTCTCAGTGAGCATGGCTTTGACTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TWVQTALKTLGL*YLSVSMALTLL Trigger: CAGCAGAGTCAAAGCCATGCTCACTGAGAGGTACAAAAGTCCCAGTGTCTTGAGAGCTGTCTGCACCCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR CAA 72 bp | ATAAAGCACACGTGCTTCAGAGACATCAGGCAAGGTTaGGAGGCAGGAGTGCTGCTAGGCACCGATGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKHTCFRDIRQG*EAGVLLGTDAF Trigger: GAAAGCATCGGTGCCTAGCAGCACTCCTGCCTCCAAACCTTGCCTGATGTCTCTGAAGCACGTGTGCTTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR TCA 90 bp | AAGGTACAAGGTGAGCTGGAAACTGAACTTGATGCAAAGGTGGTCTCTTTGAGGTGGGACACAGGAAGTTaGGGGCAGCTTGGCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVQGELETELDAKVVSLRWDTGS*GQLGLG Trigger: CCCAAGGCCAAGCTGCCCTCAACTTCCTGTGTCCCA...CCTCAAAGAGACCACCTTTGCATCAAGTTCAGTTTCCAGCTCACCTTGTACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR GCA 90 bp | GGAAGGGTGAGGCTAGAGAAGCCCAAGGTACAAGGTGAGCTGGAAACTGAACTTCTAGAGGGTCCAGGCTaGTGGATGGTGACTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRVRLEKPKVQGELETELLEGPG*WMVTFS Trigger: ACTGAAAGTCACCATCCAGCAGCCTGGACCCTCTAG...AAGTTCAGTTTCCAGCTCACCTTGTACCTTGGGCTTCTCTAGCCTCACCCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR GCA 90 bp | GCCCTTAGTTCCTCCAGCATGTCTTGTGTGTGTCTACAGACATGCATGTTCCTCGGTGTGCTGGACACCTaGTGGATCCATAGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALSSSSMSCVCLQTCMFLGVLDT*WIHSCV Trigger: CACACAGCTATGGATCCAGCAGGTGTCCAGCACACC...GAGGAACATGCATGTCTGTAGACACACACAAGACATGCTGGAGGAACTAAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR GCA 90 bp | GCCCTTAGTTCCTCCAGCATGTCTTGTGTGTGTCTACAGACATGCATGTTCCTCCCACATCCATTCTGGTaGTGGGTGTGCTGGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: ALSSSSMSCVCLQTCMFLPHPFW*WVCWTP Trigger: AGGTGTCCAGCACACCCAGCACCAGAATGGATGTGG...GAGGAACATGCATGTCTGTAGACACACACAAGACATGCTGGAGGAACTAAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR GCA 90 bp | GGAAGGGTGAGGCTAGAGAAGCCCAAGGTACAAGGTGAGCTGGAAACTGAACTTAGCTGCTCCTGGAGATaGACCACATCCATTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRVRLEKPKVQGELETELSCSWR*TTSILV Trigger: CACCAGAATGGATGTGGTGCATCTCCAGGAGCAGCT...AAGTTCAGTTTCCAGCTCACCTTGTACCTTGGGCTTCTCTAGCCTCACCCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR GCA 90 bp | AAGGTACAAGGTGAGCTGGAAACTGAACTTGATGCAAAGGTGGTCTCTTTGAGGGGGAGTAGAGTTCCCTaGGCACAGGGCAGATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVQGELETELDAKVVSLRGSRVP*AQGRCL Trigger: CAGGCATCTGCCCTGTGCGCAGGGAACTCTACTCCC...CCTCAAAGAGACCACCTTTGCATCAAGTTCAGTTTCCAGCTCACCTTGTACCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR GCA 90 bp | CAGCAGAAGGTATTCAAATGGTGTGGGGAGGACCTGGGTGCAGACAGCTCTCAACTTCCTCATGCCAAATaGCACGCTGCTCTCATACAG | + |
|
Preference number: 4 (lower is better) Translates to: QQKVFKWCGEDLGADSSQLPHAK*HAALIQ Trigger: CTGTATGAGAGCAGCGTGGCATTTGGCATGAGGAAG...TTGAGAGCTGTCTGCACCCAGGTCCTCCCCACACCATTTGAATACCTTCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR GCA 90 bp | CAGCAGAAGGTATTCAAATGGTGTGGGGAGGACCTGGGTGCAGACAGCTCTCAATGGATCTCCTCGTTGTaGTTCTTCTCCTCCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QQKVFKWCGEDLGADSSQWISSL*FFSSTC Trigger: ACAGGTGGAGGAGAAGAAGCACAACGAGGAGATCCA...TTGAGAGCTGTCTGCACCCAGGTCCTCCCCACACCATTTGAATACCTTCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CCA 90 bp | ACCTGGCCCTTAGTTCCTCCAGCATGTCTTGTGTGTGTCTACAGACATGCATGTTCTGGTAGGCAGCGATaGTCATGTGGATCTCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TWPLVPPACLVCVYRHACSGRQR*SCGSRP Trigger: GGGACGAGATCCACATGACCATCGCTGCCTACCAGA...ACATGCATGTCTGTAGACACACACAAGACATGCTGGAGGAACTAAGGGCCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CCA 90 bp | CAGCAGAAGGTATTCAAATGGTGTGGGGAGGACCTGGGTGCAGACAGCTCTCAACCTTCAGTTGCTGGTTaGTCCGTTTCAGGAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QQKVFKWCGEDLGADSSQPSVAG*SVSGTG Trigger: TCCAGTTCCTGAAACGGACCAACCAGCAACTGAAGG...TTGAGAGCTGTCTGCACCCAGGTCCTCCCCACACCATTTGAATACCTTCTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CCA 90 bp | CTCAAGACACTGGGACTTTTGTACCTCTCAGTGAGCATGGCTTTGACTCTGCTGAGGTCCAGCTGCTCCTaGAGATGCACCACATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LKTLGLLYLSVSMALTLLRSSCS*RCTTSI Trigger: AATGGATGTGGTGCATCTCCAGGAGCAGCTGGACCT...CAGCAGAGTCAAAGCCATGCTCACTGAGAGGTACAAAAGTCCCAGTGTCTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CCA 90 bp | GCTATAGTCCAAAACCAAACTCCGAAACGAGGTGCAGAAGCTTACATTAGAGAGGCAGCGATGGTCATGTaGATCTCGTCCCGGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: AIVQNQTPKRGAEAYIREAAMVM*ISSRTR Trigger: GCGTGTCCGGGACGAGATCCACATGACCATCGCTGC...CTCTCTAATGTAAGCTTCTGCACCTCGTTTCGGAGTTTGGTTTTGGACTATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR GCA 90 bp | AATGGTGTGGGGAGGACCTGGGTGCAGACAGCTCTCAAGACACTGGGACTTTTGTTCTGTTCATTCACTTaGCTCTCCAAGTCCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NGVGRTWVQTALKTLGLLFCSFT*LSKSLF Trigger: AAAGAGGGACTTGGAGAGGCAAGTGAATGAACAGAA...CAAAAGTCCCAGTGTCTTGAGAGCTGTCTGCACCCAGGTCCTCCCCACACCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
||
| 3UTR CAA 72 bp | TACAAAAATATGCCATTAGGAACTGTGTTCGCTTTCTaGTGCCCAGTTGGCATCTCTAAGGCACAGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: YKNMPLGTVFAF*CPVGISKAQHT Trigger: AGTGTGCTGTGCCTTAGAGATGCCAACTGGGCACAAGAAAGCGAACACAGTTCCTAATGGCATATTTTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| 3UTR CAA 72 bp | TGGAGGTCAGAGCTGCAGTTTTCAGGATCTACAAATTaGCCTTCAGTCCATAATTCATCTAGAACTACATGT | + |
|
Preference number: 4 (lower is better) Translates to: WRSELQFSGSTN*PSVHNSSRTTC Trigger: ACATGTAGTTCTAGATGAATTATGGACTGAAGGCAAATTTGTAGATCCTGAAAACTGCAGCTCTGACCTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
||
| CDS GCA 90 bp | AGCTTGGCCTTGGGTGGCTGTGGGCTTGTACTAGAGGGTCCAGGCTaGTGGATGGTGACTTTCAGTGGCCGAGCCGTGGGGCTCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLALGGCGLVLEGPG*WMVTFSGRAVGLRF Trigger: GAAACGGAGCCCCACGGCTCGGCCACTGAAAGTCACCATCCAGCAGCCTGGACCCTCTAGTACAAGCCCACAGCCACCCAAGGCCAAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CCA 90 bp | TTGGCCTTGGGTGGCTGTGGGCTTGTACTAGAGGGTCCAGGCTGCTaGATGGTGACTTTCAGTGGCCGAGCCGTGGGGCTCCGTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LALGGCGLVLEGPGC*MVTFSGRAVGLRFS Trigger: AGAGAAACGGAGCCCCACGGCTCGGCCACTGAAAGTCACCATCCAGCAGCCTGGACCCTCTAGTACAAGCCCACAGCCACCCAAGGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CAA 90 bp | GAGGCAGGAGTGCTGCTAGGCACCGATGCTTTCCTGCACCGCCCACAGAGCCTGCTTCCACCCACTCCCTaGGAGGCAGGATGGCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: EAGVLLGTDAFLHRPQSLLPPTP*EAGWHL Trigger: TAAATGCCATCCTGCCTCCAAGGGAGTGGGTGGAAG...CAGGCTCTGTGGGCGGTGCAGGAAAGCATCGGTGCCTAGCAGCACTCCTGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CCA 90 bp | GCTGCTCCTGGAGATGCACCACATCCATTCTGGTGCTGGGTGTGCTaGACACCTGCTGGATCCATAGCTGTGTGTCTTCCACCCACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: AAPGDAPHPFWCWVC*TPAGSIAVCLPPTP Trigger: GGGAGTGGGTGGAAGACACACAGCTATGGATCCAGCAGGTGTCCAGCACACCCAGCACCAGAATGGATGTGGTGCATCTCCAGGAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CCA 90 bp | TGCCAAATGCCACGCTGCTCTCATACAGAGTCTGGTAGGCAGCGATaGTCATGTGGATCTCGTCCCGGACACGCAGCAACAGCAGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CQMPRCSHTESGRQR*SCGSRPGHAATAAL Trigger: GAGGGCTGCTGTTGCTGCGTGTCCGGGACGAGATCCACATGACCATCGCTGCCTACCAGACTCTGTATGAGAGCAGCGTGGCATTTGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CAA 90 bp | AATGGTGTGGGGAGGACCTGGGTGCAGACAGCTCTCAAGACACTGGGACTTTTGGAAGTTGAGGGCAGCTaGGCCTTGGGTGGCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NGVGRTWVQTALKTLGLLEVEGS*ALGGCG Trigger: CCCACAGCCACCCAAGGCCAAGCTGCCCTCAACTTC...CAAAAGTCCCAGTGTCTTGAGAGCTGTCTGCACCCAGGTCCTCCCCACACCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS GCA 90 bp | TGGAGATGCACCACATCCATTCTGGTGCTGGGTGTGCTGGACACCTaGTGGATCCATAGCTGTGTGTCTTCCACCCACTCCCTTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: WRCTTSILVLGVLDT*WIHSCVSSTHSLGG Trigger: GCCTCCAAGGGAGTGGGTGGAAGACACACAGCTATGGATCCAGCAGGTGTCCAGCACACCCAGCACCAGAATGGATGTGGTGCATCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS GCA 90 bp | CCAGCTGCTCCTGGAGATGCACCACATCCATTCTGGTGCTGGGTGTaGTGGACACCTGCTGGATCCATAGCTGTGTGTCTTCCACCCACT | + |
|
Preference number: 5 (lower is better) Translates to: PAAPGDAPHPFWCWV*WTPAGSIAVCLPPT Trigger: AGTGGGTGGAAGACACACAGCTATGGATCCAGCAGGTGTCCAGCACACCCAGCACCAGAATGGATGTGGTGCATCTCCAGGAGCAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS GCA 90 bp | CATGTGGATCTCGTCCCGGACACGCAGCAACAGCAGCCCTCTCTCTaGGCAGTTGATGGTGACCTCCCGGATCAGTTCGTCAAAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: HVDLVPDTQQQQPSL*AVDGDLPDQFVKTL Trigger: CAGTGTTTTGACGAACTGATCCGGGAGGTCACCATCAACTGCGCAGAGAGAGGGCTGCTGTTGCTGCGTGTCCGGGACGAGATCCACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CCA 90 bp | AGATGCACCACATCCATTCTGGTGCTGGGTGTGCTGGACACCTGCTaGATCCATAGCTGTGTGTCTTCCACCCACTCCCTTGGAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RCTTSILVLGVLDTC*IHSCVSSTHSLGGR Trigger: CCTGCCTCCAAGGGAGTGGGTGGAAGACACACAGCTATGGATCCAGCAGGTGTCCAGCACACCCAGCACCAGAATGGATGTGGTGCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CAA 90 bp | GCATCTCTAAGGCACAGCACACTTGGGAAGCTTAGTGGTGAGGGCGCACCCCAGGCCTTCAGTTGCTGGTaGGTCCGTTTCAGGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASLRHSTLGKLSGEGAPQAFSCW*VRFRNW Trigger: CCAGTTCCTGAAACGGACCAACCAGCAACTGAAGGC...CTGGGGTGCGCCCTCACCACTAAGCTTCCCAAGTGTGCTGTGCCTTAGAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS GCA 90 bp | GCTTCAGGTCCAGCTGCTCCTGGAGATGCACCACATCCATTCTGGTaGTGGGTGTGCTGGACACCTGCTGGATCCATAGCTGTGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASGPAAPGDAPHPFW*WVCWTPAGSIAVCL Trigger: AAGACACACAGCTATGGATCCAGCAGGTGTCCAGCACACCCAGCACCAGAATGGATGTGGTGCATCTCCAGGAGCAGCTGGACCTGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CCA 90 bp | TCAGGTCCAGCTGCTCCTGGAGATGCACCACATCCATTCTGGTGCTaGGTGTGCTGGACACCTGCTGGATCCATAGCTGTGTGTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGPAAPGDAPHPFWC*VCWTPAGSIAVCLP Trigger: TGGAAGACACACAGCTATGGATCCAGCAGGTGTCCAGCACACCCAGCACCAGAATGGATGTGGTGCATCTCCAGGAGCAGCTGGACCTGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CCA 90 bp | GCTTCTTCTCCTCCACCTGTCGCCTCTCACTCTCCCGCTTCTCGGTaGCCTCGCATTTCGCCTTCTGTTCATTCACTTGCCTCTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASSPPPVASHSPASR*PRISPSVHSLASPS Trigger: ACTTGGAGAGGCAAGTGAATGAACAGAAGGCGAAATGCGAGGCCACCGAGAAGCGGGAGAGTGAGAGGCGACAGGTGGAGGAGAAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CCA 90 bp | CCTTCCAGTTGGGCCTTCAGTTGCTGGTTGGTCCGTTTCAGGAACTaGATCTCCTCGTTGTGCTTCTTCTCCTCCACCTGTCGCCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSSWAFSCWLVRFRN*ISSLCFFSSTCRLS Trigger: TGAGAGGCGACAGGTGGAGGAGAAGAAGCACAACGAGGAGATCCAGTTCCTGAAACGGACCAACCAGCAACTGAAGGCCCAACTGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CAA 90 bp | CTCAAGACACTGGGACTTTTGTACCTCTCAGTGAGCATGGCTTTGACTCTGCTGCCTCTCTCTGCGCAGTaGATGGTGACCTCCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LKTLGLLYLSVSMALTLLPLSAQ*MVTSRI Trigger: GATCCGGGAGGTCACCATCAACTGCGCAGAGAGAGG...CAGCAGAGTCAAAGCCATGCTCACTGAGAGGTACAAAAGTCCCAGTGTCTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CAA 90 bp | CAGCAGAAGGTATTCAAATGGTGTGGGGAGGACCTGGGTGCAGACAGCTCTCAAAACTGGATCTCCTCGTaGTGCTTCTTCTCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: QQKVFKWCGEDLGADSSQNWISS*CFFSST Trigger: GGTGGAGGAGAAGAAGCACAACGAGGAGATCCAGTT...TTGAGAGCTGTCTGCACCCAGGTCCTCCCCACACCATTTGAATACCTTCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CAA 90 bp | TCAGAACAGCCGTTGGGGTTCATAGGCCTTGCAGTAAGCTTAGACTGGGATGGACAGTTGGGCCTTCAGTaGCTGGTTGGTCCGTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SEQPLGFIGLAVSLDWDGQLGLQ*LVGPFQ Trigger: CTGAAACGGACCAACCAGCAACTGAAGGCCCAACTG...TCCATCCCAGTCTAAGCTTACTGCAAGGCCTATGAACCCCAACGGCTGTTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CAA 90 bp | ACCTGGCCCTTAGTTCCTCCAGCATGTCTTGTGTGTGTCTACAGACATGCATGTACCGGGGTGTCATATTaGAGCAGAGAGTCTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TWPLVPPACLVCVYRHACTGVSY*SRESAG Trigger: CCCAGCAGACTCTCTGCTCAAATATGACACCCCGGT...ACATGCATGTCTGTAGACACACACAAGACATGCTGGAGGAACTAAGGGCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS-3UTR CAA 90 bp | GGAAGGGTGAGGCTAGAGAAGCCCAAGGTACAAGGTGAGCTGGAAACTGAACTTGATAATGCCTTCCAGTaGGGCCTTCAGTTGCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GRVRLEKPKVQGELETELDNAFQ*GLQLLV Trigger: AACCAGCAACTGAAGGCCCAACTGGAAGGCATTATC...AAGTTCAGTTTCCAGCTCACCTTGTACCTTGGGCTTCTCTAGCCTCACCCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS GCA 90 bp | AATTCTGTAATTTTCCTCTCCATGTCTGACTTCCCCTGTTCGGCCTaGAGTGCCTTCCTCATGCCAAATGCCACGCTGCTCTCATACAGA | + |
|
Preference number: 5 (lower is better) Translates to: NSVIFLSMSDFPCSA*SAFLMPNATLLSYR Trigger: TCTGTATGAGAGCAGCGTGGCATTTGGCATGAGGAAGGCACTGCAGGCCGAACAGGGGAAGTCAGACATGGAGAGGAAAATTACAGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
||
| CDS-3UTR CAA 90 bp | CTCAAGACACTGGGACTTTTGTACCTCTCAGTGAGCATGGCTTTGACTCTGCTGATTTCTTCTGCCTGTTaGGTAGGATCTGGGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: LKTLGLLYLSVSMALTLLISSAC*VGSGTQ Trigger: CTGTGTCCCAGATCCTACCAAACAGGCAGAAGAAAT...CAGCAGAGTCAAAGCCATGCTCACTGAGAGGTACAAAAGTCCCAGTGTCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
||
| CDS CCA 72 bp | GGTGGCTGTGGGCTTGTACTAGAGGGTCCAGGCTGCTaGATGGTGACTTTCAGTGGCCGAGCCGTGGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GGCGLVLEGPGC*MVTFSGRAVGL Trigger: GAGCCCCACGGCTCGGCCACTGAAAGTCACCATCCAGCAGCCTGGACCCTCTAGTACAAGCCCACAGCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
||
| CDS GCA 72 bp | TTGGGTGGCTGTGGGCTTGTACTAGAGGGTCCAGGCTaGTGGATGGTGACTTTCAGTGGCCGAGCCGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGGCGLVLEGPG*WMVTFSGRAVG Trigger: CCCCACGGCTCGGCCACTGAAAGTCACCATCCAGCAGCCTGGACCCTCTAGTACAAGCCCACAGCCACCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
||
| CDS GCA 72 bp | CTCGTCCCGGACACGCAGCAACAGCAGCCCTCTCTCTaGGCAGTTGATGGTGACCTCCCGGATCAGTTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LVPDTQQQQPSL*AVDGDLPDQFV Trigger: GACGAACTGATCCGGGAGGTCACCATCAACTGCGCAGAGAGAGGGCTGCTGTTGCTGCGTGTCCGGGACGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
||
| CDS CCA 72 bp | CCTCCACCTGTCGCCTCTCACTCTCCCGCTTCTCGGTaGCCTCGCATTTCGCCTTCTGTTCATTCACTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPPVASHSPASR*PRISPSVHSLA Trigger: GGCAAGTGAATGAACAGAAGGCGAAATGCGAGGCCACCGAGAAGCGGGAGAGTGAGAGGCGACAGGTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CAA 90 bp | TCTGCCTGTTTGGTAGGATCTGGGACACAGGAAGTTGAGGGCAGCTaGGCCTTGGGTGGCTGTGGGCTTGTACTAGAGGGTCCAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SACLVGSGTQEVEGS*ALGGCGLVLEGPGC Trigger: GCAGCCTGGACCCTCTAGTACAAGCCCACAGCCACCCAAGGCCAAGCTGCCCTCAACTTCCTGTGTCCCAGATCCTACCAAACAGGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CAA 90 bp | TGTTTGGTAGGATCTGGGACACAGGAAGTTGAGGGCAGCTTGGCCTaGGGTGGCTGTGGGCTTGTACTAGAGGGTCCAGGCTGCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: CLVGSGTQEVEGSLA*GGCGLVLEGPGCWM Trigger: CATCCAGCAGCCTGGACCCTCTAGTACAAGCCCACAGCCACCCAAGGCCAAGCTGCCCTCAACTTCCTGTGTCCCAGATCCTACCAAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CCA 72 bp | GCTGCTCCTGGAGATGCACCACATCCATTCTGGTGCTaGGTGTGCTGGACACCTGCTGGATCCATAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: AAPGDAPHPFWC*VCWTPAGSIAV Trigger: CACAGCTATGGATCCAGCAGGTGTCCAGCACACCCAGCACCAGAATGGATGTGGTGCATCTCCAGGAGCAGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CCA 72 bp | CCACGCTGCTCTCATACAGAGTCTGGTAGGCAGCGATaGTCATGTGGATCTCGTCCCGGACACGCAGCAACA | + |
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Preference number: 6 (lower is better) Translates to: PRCSHTESGRQR*SCGSRPGHAAT Trigger: TGTTGCTGCGTGTCCGGGACGAGATCCACATGACCATCGCTGCCTACCAGACTCTGTATGAGAGCAGCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CAA 72 bp | CGGACACGCAGCAACAGCAGCCCTCTCTCTGCGCAGTaGATGGTGACCTCCCGGATCAGTTCGTCAAAACAC | + |
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Preference number: 6 (lower is better) Translates to: RTRSNSSPLSAQ*MVTSRISSSKH Trigger: GTGTTTTGACGAACTGATCCGGGAGGTCACCATCAACTGCGCAGAGAGAGGGCTGCTGTTGCTGCGTGTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CAA 90 bp | GCCTTCAGTTGCTGGTTGGTCCGTTTCAGGAACTGGATCTCCTCGTaGTGCTTCTTCTCCTCCACCTGTCGCCTCTCACTCTCCCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: AFSCWLVRFRNWISS*CFFSSTCRLSLSRF Trigger: GAAGCGGGAGAGTGAGAGGCGACAGGTGGAGGAGAAGAAGCACAACGAGGAGATCCAGTTCCTGAAACGGACCAACCAGCAACTGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CAA 72 bp | TGCTGGTTGGTCCGTTTCAGGAACTGGATCTCCTCGTaGTGCTTCTTCTCCTCCACCTGTCGCCTCTCACTC | + |
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Preference number: 6 (lower is better) Translates to: CWLVRFRNWISS*CFFSSTCRLSL Trigger: GAGTGAGAGGCGACAGGTGGAGGAGAAGAAGCACAACGAGGAGATCCAGTTCCTGAAACGGACCAACCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CCA 72 bp | TGGGCCTTCAGTTGCTGGTTGGTCCGTTTCAGGAACTaGATCTCCTCGTTGTGCTTCTTCTCCTCCACCTGT | + |
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Preference number: 6 (lower is better) Translates to: WAFSCWLVRFRN*ISSLCFFSSTC Trigger: ACAGGTGGAGGAGAAGAAGCACAACGAGGAGATCCAGTTCCTGAAACGGACCAACCAGCAACTGAAGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CAA 72 bp | CTCGGTGGCCTCGCATTTCGCCTTCTGTTCATTCACTaGCCTCTCCAAGTCCCTCTTTTCTGTCTCCAATTC | + |
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Preference number: 6 (lower is better) Translates to: LGGLAFRLLFIH*PLQVPLFCLQF Trigger: GAATTGGAGACAGAAAAGAGGGACTTGGAGAGGCAAGTGAATGAACAGAAGGCGAAATGCGAGGCCACCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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| CDS CAA 90 bp | CTCCCGCTTCTCGGTGGCCTCGCATTTCGCCTTCTGTTCATTCACTaGCCTCTCCAAGTCCCTCTTTTCTGTCTCCAATTCTGTAATTTT | + |
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Preference number: 6 (lower is better) Translates to: LPLLGGLAFRLLFIH*PLQVPLFCLQFCNF Trigger: AAAATTACAGAATTGGAGACAGAAAAGAGGGACTTGGAGAGGCAAGTGAATGAACAGAAGGCGAAATGCGAGGCCACCGAGAAGCGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036383.4 |
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