Pregenerated sensors for DNAL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022420Ensembl transcript IDs: ENSMUST00000023055.8, ENSMUST00000069877.12, ENSMUST00000162713.9, ENSMUST00000229644.2, ENSMUST00000230645.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCGGGCCAATGCCAGGGCTGTGAATGGCTGGTCCAGTAAGATGTaGTGGGCTGTTCAGTCCCGGGTCAGGCTGGGGAAGGGGAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: PRANARAVNGWSSKM*WAVQSRVRLGKGRG Trigger: CCCTCTCCCCTTCCCCAGCCTGACCCGGGACTGAACAGCCCACCACATCTTACTGGACCAGCCATTCACAGCCCTGGCATTGGCCCGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
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| 3UTR TCA 90 bp | GAAGTCCCTGGCAGGCCAGGTTTCCCTGCTAACGGGGCCTCACGGTaGGATCACTCCTGGCCCAGGTGTCTCACCGGGAGCTCAGCAACA | + |
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Preference number: 1 (lower is better) Translates to: EVPGRPGFPANGASR*DHSWPRCLTGSSAT Trigger: TGTTGCTGAGCTCCCGGTGAGACACCTGGGCCAGGAGTGATCTCACCGTGAGGCCCCGTTAGCAGGGAAACCTGGCCTGCCAGGGACTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
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| 3UTR CCA 90 bp | CGGGCCAATGCCAGGGCTGTGAATGGCTGGTCCAGTAAGATGTGGTaGGCTGTTCAGTCCCGGGTCAGGCTGGGGAAGGGGAGAGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: RANARAVNGWSSKMW*AVQSRVRLGKGRGN Trigger: GTTCCCTCTCCCCTTCCCCAGCCTGACCCGGGACTGAACAGCCCACCACATCTTACTGGACCAGCCATTCACAGCCCTGGCATTGGCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
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| 3UTR CCA 90 bp | CCCACCCCTCATGCACACAGAGATGCCTGTCCACAGCTCAGAGCTTaGAGACAACCACGGGGAGCCTGGGCATGGAGAGGTCACCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: PTPHAHRDACPQLRA*RQPRGAWAWRGHQV Trigger: CACTTGGTGACCTCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGGCATCTCTGTGTGCATGAGGGGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000230645.2 |
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| 3UTR GCA 90 bp | AGAATCCCGTGCTTCACCCTCTCACCTGCCACACCCCACCCCTCATaGACACAGAGATGCCTGTCCACAGCTCAGAGCTTGGAGACAACC | + |
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Preference number: 1 (lower is better) Translates to: RIPCFTLSPATPHPS*TQRCLSTAQSLETT Trigger: GGTTGTCTCCAAGCTCTGAGCTGTGGACAGGCATCTCTGTGTGCATGAGGGGTGGGGTGTGGCAGGTGAGAGGGTGAAGCACGGGATTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000230645.2 |
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| 3UTR CCA 90 bp | AGCAGTTCTGGTGGAAGGGGTGTGAAAGGTTCATGTGGCCCGAGCTaGGAGAAGGGGACAGGAAGACTGTGTGATCCTCGGGCCAATGCC | + |
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Preference number: 1 (lower is better) Translates to: SSSGGRGVKGSCGPS*EKGTGRLCDPRANA Trigger: GGCATTGGCCCGAGGATCACACAGTCTTCCTGTCCCCTTCTCCCAGCTCGGGCCACATGAACCTTTCACACCCCTTCCACCAGAACTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
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| 3UTR CCA 90 bp | CTTGGAGACAACCACGGGGAGCCTGGGCATGGAGAGGTCACCAAGTaGACACTCTGGGTGCGGCTCAGGAAACTGGTACACAAGGACAAA | + |
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Preference number: 1 (lower is better) Translates to: LGDNHGEPGHGEVTK*TLWVRLRKLVHKDK Trigger: TTTGTCCTTGTGTACCAGTTTCCTGAGCCGCACCCAGAGTGTCCACTTGGTGACCTCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000230645.2 |
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| 3UTR TCA 90 bp | AAGGGCAGGAGATACTTCCCAGCAGTCCTTGGGGCAGAAGGGCTTTaGGGCTGCTGGGATGGAAGGTGGGACCAGTCCATTTCAAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: KGRRYFPAVLGAEGL*GCWDGRWDQSISRR Trigger: TCTCCTTGAAATGGACTGGTCCCACCTTCCATCCCAGCAGCCTCAAAGCCCTTCTGCCCCAAGGACTGCTGGGAAGTATCTCCTGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
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| 3UTR CCA 90 bp | CTTCCCAGCAGTCCTTGGGGCAGAAGGGCTTTGAGGCTGCTGGGATaGAAGGTGGGACCAGTCCATTTCAAGGAGAAGAATCCCGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: LPSSPWGRRALRLLG*KVGPVHFKEKNPVL Trigger: AAGCACGGGATTCTTCTCCTTGAAATGGACTGGTCCCACCTTCCATCCCAGCAGCCTCAAAGCCCTTCTGCCCCAAGGACTGCTGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
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| 3UTR GCA 90 bp | ACCTCGTGGGTGATCTCAAACCCAAACCCCTCGCCGATCACCACATaGCAGGAGGAGCCGAACTTCTTGTCCATTGTCTCCTTGATCATC | + |
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Preference number: 1 (lower is better) Translates to: TSWVISNPNPSPITT*QEEPNFLSIVSLII Trigger: GATGATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTCCTGGCATGTGGTGATCGGCGAGGGGTTTGGGTTTGAGATCACCCACGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGTCCACAGCTCAGAGCTTGGAGACAACCACGGGGAGCCTGGGCATGGAGAGGAGAGAGCCAGGCTCTaGCTAGGGGAGCCTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PVHSSELGDNHGEPGHGEERARL*LGEPGE Trigger: CTCCCCAGGCTCCCCTAGGCAGAGCCTGGCTCTCTC...CTCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000230645.2 |
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| 3UTR-3UTR CCA 90 bp | ACGGGGAGCCTGGGCATGGAGAGGTCACCAAGTGGACACTCTGGGTGCGGCTCAACCAAGTGGACACTCTaGGTGCGGCTCAGGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: TGSLGMERSPSGHSGCGSTKWTL*VRLRKL Trigger: CAGTTTCCTGAGCCGCACCCAGAGTGTCCACTTGGT...TGAGCCGCACCCAGAGTGTCCACTTGGTGACCTCTCCATGCCCAGGCTCCCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000230645.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGGCAGGCCAGGTTTCCCTGCTAACGGGGCCTCACGGTGAGATCACTCCTTCATGTGGCCCGAGCTaGGAGAAGGGGACAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SLAGQVSLLTGPHGEITPSCGPS*EKGTGR Trigger: TCTTCCTGTCCCCTTCTCCCAGCTCGGGCCACATGA...AGGAGTGATCTCACCGTGAGGCCCCGTTAGCAGGGAAACCTGGCCTGCCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
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| 3UTR-3UTR TCA 90 bp | AACCACGGGGAGCCTGGGCATGGAGAGGTCACCAAGTGGACACTCTGGGTGCGGTCTTCACCTCGTGGGTaGTCTCAAACCCAAACCCCT | + |
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Preference number: 2 (lower is better) Translates to: NHGEPGHGEVTKWTLWVRSSPRG*SQTQTP Trigger: AGGGGTTTGGGTTTGAGATCACCCACGAGGTGAAGA...CCGCACCCAGAGTGTCCACTTGGTGACCTCTCCATGCCCAGGCTCCCCGTGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
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| 3UTR-3UTR CCA 90 bp | CCACAGCTCAGAGCTTGGAGACAACCACGGGGAGCCTGGGCATGGAGAGGTCACACCAAGTGGACACTCTaGGTGCGGCTCAGGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: PQLRAWRQPRGAWAWRGHTKWTL*VRLRKL Trigger: CAGTTTCCTGAGCCGCACCCAGAGTGTCCACTTGGT...GTGACCTCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000230645.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGGGCAGGAGATACTTCCCAGCAGTCCTTGGGGCAGAAGGGCTTTGAGGCTGCCACAGCTCAGAGCTTaGAGACAACCACGGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: QGQEILPSSPWGRRALRLPQLRA*RQPRGA Trigger: GGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGG...CAGCCTCAAAGCCCTTCTGCCCCAAGGACTGCTGGGAAGTATCTCCTGCCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
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| 3UTR-3UTR GCA 90 bp | AGCTTGGAGACAACCACGGGGAGCCTGGGCATGGAGAGGTCACCAAGTGGACACAGGAGAAGAATCCCGTaGTTCACCCTCTCACCTGCC | + |
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Preference number: 2 (lower is better) Translates to: SLETTTGSLGMERSPSGHRRRIP*FTLSPA Trigger: GGCAGGTGAGAGGGTGAAGCACGGGATTCTTCTCCT...GTGTCCACTTGGTGACCTCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000230645.2 |
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| 3UTR CAA 90 bp | CAAGGGCAGGAGATACTTCCCAGCAGTCCTTGGGGCAGAAGGGCTTaGAGGCTGCTGGGATGGAAGGTGGGACCAGTCCATTTCAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QGQEILPSSPWGRRA*RLLGWKVGPVHFKE Trigger: CTCCTTGAAATGGACTGGTCCCACCTTCCATCCCAGCAGCCTCAAAGCCCTTCTGCCCCAAGGACTGCTGGGAAGTATCTCCTGCCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
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| 3UTR-3UTR CCA 90 bp | CTAACAACAAGGGCAGGAGATACTTCCCAGCAGTCCTTGGGGCAGAAGGGCTTTCGGGGAGCCTGGGCATaGAGAGGTCACCAAGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LTTRAGDTSQQSLGQKGFRGAWA*RGHQVD Trigger: GTCCACTTGGTGACCTCTCCATGCCCAGGCTCCCCG...AAAGCCCTTCTGCCCCAAGGACTGCTGGGAAGTATCTCCTGCCCTTGTTGTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
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| 3UTR-3UTR GCA 90 bp | GGACACTCTGGGTGCGGCTCAGGAAACTGGTACACAAGGACAAAAGAAAAGACTGAGAGAGCCAGGCTCTaGCTAGGGGAGCCTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GHSGCGSGNWYTRTKEKTERARL*LGEPGE Trigger: CTCCCCAGGCTCCCCTAGGCAGAGCCTGGCTCTCTC...AGTCTTTTCTTTTGTCCTTGTGTACCAGTTTCCTGAGCCGCACCCAGAGTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000229644.2 ENSMUST00000230645.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGCTAACGGGGCCTCACGGTGAGATCACTCCTGGCCCAGGTGTCTCACCGTGCGGCTCAGGAAACTaGTACACAAGGACAAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: SLLTGPHGEITPGPGVSPCGSGN*YTRTKE Trigger: TTCTTTTGTCCTTGTGTACCAGTTTCCTGAGCCGCA...CGGTGAGACACCTGGGCCAGGAGTGATCTCACCGTGAGGCCCCGTTAGCAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
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| 3UTR-3UTR TCA 90 bp | GACAACCACGGGGAGCCTGGGCATGGAGAGGTCACCAAGTGGACACTCTGGGTGTGTCCATTGTCTCCTTaGTCATCTTTGCAGCACTCT | + |
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Preference number: 2 (lower is better) Translates to: DNHGEPGHGEVTKWTLWVCPLSP*SSLQHS Trigger: AGAGTGCTGCAAAGATGATCAAGGAGACAATGGACA...CACCCAGAGTGTCCACTTGGTGACCTCTCCATGCCCAGGCTCCCCGTGGTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCTGGGTGCGGCTCAGGAAACTGGTACACAAGGACAAAAGAAAAGACTTGACGAGAGAGCCAGGCTCTaGCTAGGGGAGCCTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: TLGAAQETGTQGQKKRLDERARL*LGEPGE Trigger: CTCCCCAGGCTCCCCTAGGCAGAGCCTGGCTCTCTC...GTCAAGTCTTTTCTTTTGTCCTTGTGTACCAGTTTCCTGAGCCGCACCCAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000229644.2 ENSMUST00000230645.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAGGTAAGAAGTACAAATCGCATGCGGTCCCTGATGAAGTCCCTGGCAGGGCCACGCAGCAGTTCTaGTGGAAGGGGTGTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: QQGKKYKSHAVPDEVPGRATQQF*WKGCER Trigger: CCTTTCACACCCCTTCCACCAGAACTGCTGCGTGGC...CCTGCCAGGGACTTCATCAGGGACCGCATGCGATTTGTACTTCTTACCTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
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| 3UTR CAA 90 bp | CCAAACCCCTCGCCGATCACCACATGCCAGGAGGAGCCGAACTTCTaGTCCATTGTCTCCTTGATCATCTTTGCAGCACTCTGGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PNPSPITTCQEEPNF*SIVSLIIFAALWKG Trigger: TCCCTTCCAGAGTGCTGCAAAGATGATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTCCTGGCATGTGGTGATCGGCGAGGGGTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
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| 3UTR-3UTR CCA 90 bp | ACACAGAGATGCCTGTCCACAGCTCAGAGCTTGGAGACAACCACGGGGAGCCTGAGGTTCTTCACCTCGTaGGTGATCTCAAACCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: TQRCLSTAQSLETTTGSLRFFTS*VISNPN Trigger: GTTTGGGTTTGAGATCACCCACGAGGTGAAGAACCT...CAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGGCATCTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCACACAGAGATGCCTGTCCACAGCTCAGAGCTTGGAGACAACCACGGGGAGCTCCTTGATCATCTTTaGAGCACTCTGGAAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: MHTEMPVHSSELGDNHGELLDHL*STLEGR Trigger: TCTCCCTTCCAGAGTGCTGCAAAGATGATCAAGGAG...CTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGGCATCTCTGTGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGCGGCTCAGGAAACTGGTACACAAGGACAAAAGAAAAGACTTGACTCTCCTACCAAGTGGACACTCTaGGTGCGGCTCAGGAAACTG | + |
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Preference number: 2 (lower is better) Translates to: GAAQETGTQGQKKRLDSPTKWTL*VRLRKL Trigger: CAGTTTCCTGAGCCGCACCCAGAGTGTCCACTTGGT...AGGAGAGTCAAGTCTTTTCTTTTGTCCTTGTGTACCAGTTTCCTGAGCCGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000229644.2 ENSMUST00000230645.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGAAACTGGTACACAAGGACAAAAGAAAAGACTTGACTCTCCTTGAGAGATGCGGCTCAGGAAACTaGTACACAAGGACAAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LRKLVHKDKRKDLTLLERCGSGN*YTRTKE Trigger: TTCTTTTGTCCTTGTGTACCAGTTTCCTGAGCCGCA...TCTCTCAAGGAGAGTCAAGTCTTTTCTTTTGTCCTTGTGTACCAGTTTCCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000229644.2 ENSMUST00000230645.2 |
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| 3UTR TCA 72 bp | GGCAGGCCAGGTTTCCCTGCTAACGGGGCCTCACGGTaGGATCACTCCTGGCCCAGGTGTCTCACCGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: GRPGFPANGASR*DHSWPRCLTGS Trigger: GCTCCCGGTGAGACACCTGGGCCAGGAGTGATCTCACCGTGAGGCCCCGTTAGCAGGGAAACCTGGCCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
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| 3UTR-3UTR CAA 90 bp | GCGGTCCCTGATGAAGTCCCTGGCAGGCCAGGTTTCCCTGCTAACGGGGCCTCATCCACAGCTCAGAGCTaGGAGACAACCACGGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: AVPDEVPGRPGFPANGASSTAQS*ETTTGS Trigger: GCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGA...TGAGGCCCCGTTAGCAGGGAAACCTGGCCTGCCAGGGACTTCATCAGGGACCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
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| 3UTR TCA 72 bp | TGGCCCGAGCTGGGAGAAGGGGACAGGAAGACTGTGTaGTCCTCGGGCCAATGCCAGGGCTGTGAATGGCTG | + |
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Preference number: 3 (lower is better) Translates to: WPELGEGDRKTV*SSGQCQGCEWL Trigger: CAGCCATTCACAGCCCTGGCATTGGCCCGAGGATCACACAGTCTTCCTGTCCCCTTCTCCCAGCTCGGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
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| 3UTR CCA 72 bp | CTCAGAGCTTGGAGACAACCACGGGGAGCCTGGGCATaGAGAGGTCACCAAGTGGACACTCTGGGTGCGGCT | + |
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Preference number: 3 (lower is better) Translates to: LRAWRQPRGAWA*RGHQVDTLGAA Trigger: AGCCGCACCCAGAGTGTCCACTTGGTGACCTCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000230645.2 |
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| 3UTR CCA 72 bp | TACACCACCGCACCAGCCTCGGCCACGCAGCAGTTCTaGTGGAAGGGGTGTGAAAGGTTCATGTGGCCCGAG | + |
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Preference number: 3 (lower is better) Translates to: YTTAPASATQQF*WKGCERFMWPE Trigger: CTCGGGCCACATGAACCTTTCACACCCCTTCCACCAGAACTGCTGCGTGGCCGAGGCTGGTGCGGTGGTGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
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| 3UTR GCA 72 bp | TCACCTGCCACACCCCACCCCTCATGCACACAGAGATaGCTGTCCACAGCTCAGAGCTTGGAGACAACCACG | + |
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Preference number: 3 (lower is better) Translates to: SPATPHPSCTQR*LSTAQSLETTT Trigger: CGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGGCATCTCTGTGTGCATGAGGGGTGGGGTGTGGCAGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000230645.2 |
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| 3UTR CCA 72 bp | CATGCACACAGAGATGCCTGTCCACAGCTCAGAGCTTaGAGACAACCACGGGGAGCCTGGGCATGGAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: HAHRDACPQLRA*RQPRGAWAWRG Trigger: ACCTCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGGCATCTCTGTGTGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000230645.2 |
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| 3UTR CCA 72 bp | TGTGATCCTCGGGCCAATGCCAGGGCTGTGAATGGCTaGTCCAGTAAGATGTGGTGGGCTGTTCAGTCCCGG | + |
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Preference number: 3 (lower is better) Translates to: CDPRANARAVNG*SSKMWWAVQSR Trigger: CCGGGACTGAACAGCCCACCACATCTTACTGGACCAGCCATTCACAGCCCTGGCATTGGCCCGAGGATCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
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| 3UTR-3UTR CAA 90 bp | ATGCACACAGAGATGCCTGTCCACAGCTCAGAGCTTGGAGACAACCACGGGGAGTGGGGCAGAAGGGCTTaGAGGCTGCTGGGATGGAAG | + |
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Preference number: 3 (lower is better) Translates to: MHTEMPVHSSELGDNHGEWGRRA*RLLGWK Trigger: CTTCCATCCCAGCAGCCTCAAAGCCCTTCTGCCCCA...CTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGGCATCTCTGTGTGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
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| 3UTR GCA 72 bp | AGGTGGGACCAGTCCATTTCAAGGAGAAGAATCCCGTaGTTCACCCTCTCACCTGCCACACCCCACCCCTCA | + |
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Preference number: 3 (lower is better) Translates to: RWDQSISRRRIP*FTLSPATPHPS Trigger: TGAGGGGTGGGGTGTGGCAGGTGAGAGGGTGAAGCACGGGATTCTTCTCCTTGAAATGGACTGGTCCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
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| 3UTR CCA 72 bp | CCCCCGAAGTACAGGTACAGGAGGTTCTTCACCTCGTaGGTGATCTCAAACCCAAACCCCTCGCCGATCACC | + |
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Preference number: 3 (lower is better) Translates to: PPKYRYRRFFTS*VISNPNPSPIT Trigger: GGTGATCGGCGAGGGGTTTGGGTTTGAGATCACCCACGAGGTGAAGAACCTCCTGTACCTGTACTTCGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
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| 3UTR TCA 72 bp | AGATACTTCCCAGCAGTCCTTGGGGCAGAAGGGCTTTaGGGCTGCTGGGATGGAAGGTGGGACCAGTCCATT | + |
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Preference number: 3 (lower is better) Translates to: RYFPAVLGAEGL*GCWDGRWDQSI Trigger: AATGGACTGGTCCCACCTTCCATCCCAGCAGCCTCAAAGCCCTTCTGCCCCAAGGACTGCTGGGAAGTATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
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| 3UTR TCA 72 bp | GAAGACTGTGTGATCCTCGGGCCAATGCCAGGGCTGTaGATGGCTGGTCCAGTAAGATGTGGTGGGCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: EDCVILGPMPGL*MAGPVRCGGLF Trigger: GAACAGCCCACCACATCTTACTGGACCAGCCATTCACAGCCCTGGCATTGGCCCGAGGATCACACAGTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
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| 3UTR GCA 72 bp | TTCAAGGAGAAGAATCCCGTGCTTCACCCTCTCACCTaGCACACCCCACCCCTCATGCACACAGAGATGCCT | + |
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Preference number: 3 (lower is better) Translates to: FKEKNPVLHPLT*HTPPLMHTEMP Trigger: AGGCATCTCTGTGTGCATGAGGGGTGGGGTGTGGCAGGTGAGAGGGTGAAGCACGGGATTCTTCTCCTTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000230645.2 |
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| 3UTR CCA 72 bp | GAGCCTGGGCATGGAGAGGTCACCAAGTGGACACTCTaGGTGCGGCTCAGGAAACTGGTACACAAGGACAAA | + |
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Preference number: 3 (lower is better) Translates to: EPGHGEVTKWTL*VRLRKLVHKDK Trigger: TTTGTCCTTGTGTACCAGTTTCCTGAGCCGCACCCAGAGTGTCCACTTGGTGACCTCTCCATGCCCAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000230645.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGTCCACAGCTCAGAGCTTGGAGACAACCACGGGGAGCCTGGGCATGGAGAGGACAAAAGAAAAGACTaGACTCTCCTTGAGAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: PVHSSELGDNHGEPGHGEDKRKD*TLLERA Trigger: GGCTCTCTCAAGGAGAGTCAAGTCTTTTCTTTTGTC...CTCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000230645.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAAGGAGAAGAATCCCGTGCTTCACCCTCTCACCTGCCACACCCCACCCCTCGAGGAGCCGAACTTCTaGTCCATTGTCTCCTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: FKEKNPVLHPLTCHTPPLEEPNF*SIVSLI Trigger: GATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTC...GAGGGGTGGGGTGTGGCAGGTGAGAGGGTGAAGCACGGGATTCTTCTCCTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
||
| 3UTR GCA 72 bp | GTGATCTCAAACCCAAACCCCTCGCCGATCACCACATaGCAGGAGGAGCCGAACTTCTTGTCCATTGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VISNPNPSPITT*QEEPNFLSIVS Trigger: GGAGACAATGGACAAGAAGTTCGGCTCCTCCTGGCATGTGGTGATCGGCGAGGGGTTTGGGTTTGAGATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTGGAGACAACCACGGGGAGCCTGGGCATGGAGAGGTCACCAAGTGGACACGACAAAAGAAAAGACTaGACTCTCCTTGAGAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SLETTTGSLGMERSPSGHDKRKD*TLLERA Trigger: GGCTCTCTCAAGGAGAGTCAAGTCTTTTCTTTTGTC...GTGTCCACTTGGTGACCTCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000230645.2 |
||
| 3UTR TCA 72 bp | CGAAGTACAGGTACAGGAGGTTCTTCACCTCGTGGGTaGTCTCAAACCCAAACCCCTCGCCGATCACCACAT | + |
|
Preference number: 3 (lower is better) Translates to: RSTGTGGSSPRG*SQTQTPRRSPH Trigger: ATGTGGTGATCGGCGAGGGGTTTGGGTTTGAGATCACCCACGAGGTGAAGAACCTCCTGTACCTGTACTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
||
| 3UTR CCA 72 bp | AGTCCTTGGGGCAGAAGGGCTTTGAGGCTGCTGGGATaGAAGGTGGGACCAGTCCATTTCAAGGAGAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SPWGRRALRLLG*KVGPVHFKEKN Trigger: ATTCTTCTCCTTGAAATGGACTGGTCCCACCTTCCATCCCAGCAGCCTCAAAGCCCTTCTGCCCCAAGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTGGGTGCGGCTCAGGAAACTGGTACACAAGGACAAAAGAAAAGACTTGACTCCACAGCTCAGAGCTaGGAGACAACCACGGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: TLGAAQETGTQGQKKRLDSTAQS*ETTTGS Trigger: GCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGA...GTCAAGTCTTTTCTTTTGTCCTTGTGTACCAGTTTCCTGAGCCGCACCCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000230645.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAGGAGAAGAATCCCGTGCTTCACCCTCTCACCTGCCACACCCCACCCCTCTTGTCCATTGTCTCCTaGATCATCTTTGCAGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: FKEKNPVLHPLTCHTPPLLSIVS*IIFAAL Trigger: GAGTGCTGCAAAGATGATCAAGGAGACAATGGACAA...GAGGGGTGGGGTGTGGCAGGTGAGAGGGTGAAGCACGGGATTCTTCTCCTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGCGGCTCAGGAAACTGGTACACAAGGACAAAAGAAAAGACTTGACTCTCCTGACAAAAGAAAAGACTaGACTCTCCTTGAGAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GAAQETGTQGQKKRLDSPDKRKD*TLLERA Trigger: GGCTCTCTCAAGGAGAGTCAAGTCTTTTCTTTTGTC...AGGAGAGTCAAGTCTTTTCTTTTGTCCTTGTGTACCAGTTTCCTGAGCCGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000229644.2 ENSMUST00000230645.2 |
||
| CDS-3UTR GCA 90 bp | ACCACGGGGAGCCTGGGCATGGAGAGGTCACCAAGTGGACACTCTGGGTGCGGCTCGCCGATCACCACATaGCAGGAGGAGCCGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTGSLGMERSPSGHSGCGSPITT*QEEPNF Trigger: GAAGTTCGGCTCCTCCTGGCATGTGGTGATCGGCGA...GCCGCACCCAGAGTGTCCACTTGGTGACCTCTCCATGCCCAGGCTCCCCGTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTGCTAACGGGGCCTCACGGTGAGATCACTCCTGGCCCAGGTGTCTCACCGCACGCGCATCTCCTCTaGCATGTCCGAGTGCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLLTGPHGEITPGPGVSPHAHLL*HVRVPD Trigger: GTCAGGCACTCGGACATGCCAGAGGAGATGCGCGTG...CGGTGAGACACCTGGGCCAGGAGTGATCTCACCGTGAGGCCCCGTTAGCAGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
||
| CDS-3UTR TCA 90 bp | GTTCATGTGGCCCGAGCTGGGAGAAGGGGACAGGAAGACTGTGTGATCCTCGGGGCATGTCCGAGTGCCTaGCCAGGGGGAAGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VHVARAGRRGQEDCVILGACPSA*PGGRSA Trigger: TGCAGACCTTCCCCCTGGTCAGGCACTCGGACATGC...CCCGAGGATCACACAGTCTTCCTGTCCCCTTCTCCCAGCTCGGGCCACATGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
||
| CDS-3UTR TCA 90 bp | CAGAGCTTGGAGACAACCACGGGGAGCCTGGGCATGGAGAGGTCACCAAGTGGAGCATGTCCGAGTGCCTaGCCAGGGGGAAGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSLETTTGSLGMERSPSGACPSA*PGGRSA Trigger: TGCAGACCTTCCCCCTGGTCAGGCACTCGGACATGC...TCCACTTGGTGACCTCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000230645.2 |
||
| CDS-3UTR TCA 90 bp | GACTTGACTCTCCTTGAGAGAGCCAGGCTCTGCCTAGGGGAGCCTGGGGAGCCCTCTTTGCAGCACTCCTaGCCAGGGGGAAGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DLTLLERARLCLGEPGEPSLQHS*PGGRSA Trigger: TGCAGACCTTCCCCCTGGTCAGGAGTGCTGCAAAGA...GGGCTCCCCAGGCTCCCCTAGGCAGAGCCTGGCTCTCTCAAGGAGAGTCAAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000229644.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTGGCAGGCCAGGTTTCCCTGCTAACGGGGCCTCACGGTGAGATCACTCCTCACGCGCATCTCCTCTaGCATGTCCGAGTGCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLAGQVSLLTGPHGEITPHAHLL*HVRVPD Trigger: GTCAGGCACTCGGACATGCCAGAGGAGATGCGCGTG...AGGAGTGATCTCACCGTGAGGCCCCGTTAGCAGGGAAACCTGGCCTGCCAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
||
| CDS-3UTR TCA 90 bp | ACCCAAACCCCTCGCCGATCACCACATGCCAGGAGGAGCCGAACTTCTTGTCCAGCATGTCCGAGTGCCTaGCCAGGGGGAAGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQTPRRSPHARRSRTSCPACPSA*PGGRSA Trigger: TGCAGACCTTCCCCCTGGTCAGGCACTCGGACATGC...TGGACAAGAAGTTCGGCTCCTCCTGGCATGTGGTGATCGGCGAGGGGTTTGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
||
| CDS-3UTR TCA 90 bp | GGTTCATGTGGCCCGAGCTGGGAGAAGGGGACAGGAAGACTGTGTGATCCTCGGGGGGCAGAAGGGCTTTaGGGCTCGTGGGTGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSCGPSWEKGTGRLCDPRGAEGL*GSWVIS Trigger: TGAGATCACCCACGAGCCTCAAAGCCCTTCTGCCCC...CCGAGGATCACACAGTCTTCCTGTCCCCTTCTCCCAGCTCGGGCCACATGAACC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069877.12 |
||
| CDS-3UTR TCA 90 bp | CCACGGGGAGCCTGGGCATGGAGAGGTCACCAAGTGGACACTCTGGGTGCGGCTATTTCTCACAGGCTGTaGCACACAGCTCCATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRGAWAWRGHQVDTLGAAISHRL*HTAPWS Trigger: AGACCATGGAGCTGTGTGTCACAGCCTGTGAGAAAT...AGCCGCACCCAGAGTGTCCACTTGGTGACCTCTCCATGCCCAGGCTCCCCGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000230645.2 |
||
| CDS-3UTR TCA 90 bp | GCGGTCCCTGATGAAGTCCCTGGCAGGCCAGGTTTCCCTGCTAACGGGGCCTCATTTGAGGCTCGTGGGTaGTCTCAAACCCAAACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVPDEVPGRPGFPANGASFEARG*SQTQTP Trigger: AGGGGTTTGGGTTTGAGATCACCCACGAGCCTCAAA...TGAGGCCCCGTTAGCAGGGAAACCTGGCCTGCCAGGGACTTCATCAGGGACCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069877.12 |
||
| CDS-3UTR CCA 90 bp | ACACAGAGATGCCTGTCCACAGCTCAGAGCTTGGAGACAACCACGGGGAGCCTGCACGCGCATCTCCTCTaGCATGTCCGAGTGCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TQRCLSTAQSLETTTGSLHAHLL*HVRVPD Trigger: GTCAGGCACTCGGACATGCCAGAGGAGATGCGCGTG...CAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGGCATCTCTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000230645.2 |
||
| 3UTR CAA 72 bp | TCATGCACACAGAGATGCCTGTCCACAGCTCAGAGCTaGGAGACAACCACGGGGAGCCTGGGCATGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCTQRCLSTAQS*ETTTGSLGMER Trigger: CCTCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGGCATCTCTGTGTGCATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000230645.2 |
||
| CDS-3UTR TCA 90 bp | GGCTGGTCCAGTAAGATGTGGTGGGCTGTTCAGTCCCGGGTCAGGCTGGGGAAGTCTTCACCTCGTGGGTaGTCTCAAACCCAAACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GWSSKMWWAVQSRVRLGKSSPRG*SQTQTP Trigger: AGGGGTTTGGGTTTGAGATCACCCACGAGGTGAAGA...CTTCCCCAGCCTGACCCGGGACTGAACAGCCCACCACATCTTACTGGACCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
||
| CDS-3UTR GCA 90 bp | GATCCTCGGGCCAATGCCAGGGCTGTGAATGGCTGGTCCAGTAAGATGTGGTGGTCGCCGATCACCACATaGCAGGAGGAGCCGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: DPRANARAVNGWSSKMWWSPITT*QEEPNF Trigger: GAAGTTCGGCTCCTCCTGGCATGTGGTGATCGGCGA...CCACCACATCTTACTGGACCAGCCATTCACAGCCCTGGCATTGGCCCGAGGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
||
| CDS-3UTR TCA 90 bp | AGAGCTTGGAGACAACCACGGGGAGCCTGGGCATGGAGAGGTCACCAAGTGGACTCTTCACCTCGTGGGTaGTCTCAAACCCAAACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAWRQPRGAWAWRGHQVDSSPRG*SQTQTP Trigger: AGGGGTTTGGGTTTGAGATCACCCACGAGGTGAAGA...GTCCACTTGGTGACCTCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 |
||
| CDS-3UTR TCA 90 bp | GCGGTCCCTGATGAAGTCCCTGGCAGGCCAGGTTTCCCTGCTAACGGGGCCTCATGTCCATTGTCTCCTTaGTCATCTTTGCAGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVPDEVPGRPGFPANGASCPLSP*SSLQHS Trigger: AGAGTGCTGCAAAGATGATCAAGGAGACAATGGACA...TGAGGCCCCGTTAGCAGGGAAACCTGGCCTGCCAGGGACTTCATCAGGGACCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
||
| CDS-3UTR TCA 90 bp | AACCACGGGGAGCCTGGGCATGGAGAGGTCACCAAGTGGACACTCTGGGTGCGGTGTCCATTGTCTCCTTaGTCATCTTTGCAGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: NHGEPGHGEVTKWTLWVRCPLSP*SSLQHS Trigger: AGAGTGCTGCAAAGATGATCAAGGAGACAATGGACA...CCGCACCCAGAGTGTCCACTTGGTGACCTCTCCATGCCCAGGCTCCCCGTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGATGCCTGTCCACAGCTCAGAGCTTGGAGACAACCACGGGGAGCCTGGGCAGGTTCTTCACCTCGTaGGTGATCTCAAACCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QRCLSTAQSLETTTGSLGRFFTS*VISNPN Trigger: GTTTGGGTTTGAGATCACCCACGAGGTGAAGAACCT...GCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGGCATCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTGGACACTCTGGGTGCGGCTCAGGAAACTGGTACACAAGGACAAAAGAAAGCATGTCCGAGTGCCTaGCCAGGGGGAAGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVDTLGAAQETGTQGQKKACPSA*PGGRSA Trigger: TGCAGACCTTCCCCCTGGTCAGGCACTCGGACATGC...TTTCTTTTGTCCTTGTGTACCAGTTTCCTGAGCCGCACCCAGAGTGTCCACTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000230645.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGTCCACAGCTCAGAGCTTGGAGACAACCACGGGGAGCCTGGGCATGGAGAATAGTGACAGGCACATaGCAGCTCCTCATTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ACPQLRAWRQPRGAWAWRIVTGT*QLLIVV Trigger: AACAACAATGAGGAGCTGGCATGTGCCTGTCACTAT...TCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAGTACAAATCGCATGCGGTCCCTGATGAAGTCCCTGGCAGGCCAGGTTTCCTTCCCAGCAGTCCTTaGGGCAGAAGGGCTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKYKSHAVPDEVPGRPGFLPSSP*GRRALR Trigger: CCTCAAAGCCCTTCTGCCCCAAGGACTGCTGGGAAG...GAAACCTGGCCTGCCAGGGACTTCATCAGGGACCGCATGCGATTTGTACTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069877.12 |
||
| 3UTR CAA 72 bp | CTAACAACAAGGGCAGGAGATACTTCCCAGCAGTCCTaGGGGCAGAAGGGCTTTGAGGCTGCTGGGATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTTRAGDTSQQS*GQKGFEAAGME Trigger: TTCCATCCCAGCAGCCTCAAAGCCCTTCTGCCCCAAGGACTGCTGGGAAGTATCTCCTGCCCTTGTTGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023055.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAGTACAAATCGCATGCGGTCCCTGATGAAGTCCCTGGCAGGCCAGGTTTCGAACTCCTTCCCCAGTaGAAAGGAGAGCCTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KKYKSHAVPDEVPGRPGFELLPQ*KGEPCP Trigger: AGGGCAAGGCTCTCCTTTTCACTGGGGAAGGAGTTC...GAAACCTGGCCTGCCAGGGACTTCATCAGGGACCGCATGCGATTTGTACTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069877.12 |
||
| CDS-3UTR CCA 90 bp | GGACACTCTGGGTGCGGCTCAGGAAACTGGTACACAAGGACAAAAGAAAAGACTCACGCGCATCTCCTCTaGCATGTCCGAGTGCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GHSGCGSGNWYTRTKEKTHAHLL*HVRVPD Trigger: GTCAGGCACTCGGACATGCCAGAGGAGATGCGCGTG...AGTCTTTTCTTTTGTCCTTGTGTACCAGTTTCCTGAGCCGCACCCAGAGTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000230645.2 |
||
| CDS-3UTR GCA 90 bp | CCTCACGGTGAGATCACTCCTGGCCCAGGTGTCTCACCGGGAGCTCAGCAACACCTCCTTGATCATCTTTaGAGCACTCTCATTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PHGEITPGPGVSPGAQQHLLDHL*STLIVV Trigger: AACAACAATGAGAGTGCTGCAAAGATGATCAAGGAG...GTGTTGCTGAGCTCCCGGTGAGACACCTGGGCCAGGAGTGATCTCACCGTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
||
| 3UTR CAA 72 bp | TGCCAGGAGGAGCCGAACTTCTTGTCCATTGTCTCCTaGATCATCTTTGCAGCACTCTGGAAGGGAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CQEEPNFLSIVS*IIFAALWKGEG Trigger: ACCCTCTCCCTTCCAGAGTGCTGCAAAGATGATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTCCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
||
| 3UTR CAA 72 bp | TCGCCGATCACCACATGCCAGGAGGAGCCGAACTTCTaGTCCATTGTCTCCTTGATCATCTTTGCAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SPITTCQEEPNF*SIVSLIIFAAL Trigger: GAGTGCTGCAAAGATGATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTCCTGGCATGTGGTGATCGGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
||
| CDS-3UTR GCA 90 bp | ACACAGAGATGCCTGTCCACAGCTCAGAGCTTGGAGACAACCACGGGGAGCCTGCTCCTTGATCATCTTTaGAGCACTCTCATTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TQRCLSTAQSLETTTGSLLLDHL*STLIVV Trigger: AACAACAATGAGAGTGCTGCAAAGATGATCAAGGAG...CAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGGCATCTCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 |
||
| CDS-3UTR TCA 90 bp | GTAAGAAGTACAAATCGCATGCGGTCCCTGATGAAGTCCCTGGCAGGCCAGGTTTGTCCATTGTCTCCTTaGTCATCTTTGCAGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRSTNRMRSLMKSLAGQVCPLSP*SSLQHS Trigger: AGAGTGCTGCAAAGATGATCAAGGAGACAATGGACA...AACCTGGCCTGCCAGGGACTTCATCAGGGACCGCATGCGATTTGTACTTCTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
||
| CDS-3UTR TCA 90 bp | GTGCGGCTCAGGAAACTGGTACACAAGGACAAAAGAAAAGACTTGACTCTCCTTTCTTCACCTCGTGGGTaGTCTCAAACCCAAACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRLRKLVHKDKRKDLTLLSSPRG*SQTQTP Trigger: AGGGGTTTGGGTTTGAGATCACCCACGAGGTGAAGA...AAGGAGAGTCAAGTCTTTTCTTTTGTCCTTGTGTACCAGTTTCCTGAGCCGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000229644.2 |
||
| CDS-3UTR TCA 90 bp | GTGCGGCTCAGGAAACTGGTACACAAGGACAAAAGAAAAGACTTGACTCTCCTTTGTCCATTGTCTCCTTaGTCATCTTTGCAGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRLRKLVHKDKRKDLTLLCPLSP*SSLQHS Trigger: GGAGTGCTGCAAAGATGATCAAGGAGACAATGGACA...AAGGAGAGTCAAGTCTTTTCTTTTGTCCTTGTGTACCAGTTTCCTGAGCCGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229644.2 |
||
| CDS-3UTR GCA 90 bp | AAACTGGTACACAAGGACAAAAGAAAAGACTTGACTCTCCTTGAGAGAGCCAGGCTCCTTGATCATCTTTaGAGCACTCTCATTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLVHKDKRKDLTLLERARLLDHL*STLIVV Trigger: AACAACAATGAGAGTGCTGCAAAGATGATCAAGGAG...CCTGGCTCTCTCAAGGAGAGTCAAGTCTTTTCTTTTGTCCTTGTGTACCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 |
||
| CDS-3UTR CAA 90 bp | GCGGTCCCTGATGAAGTCCCTGGCAGGCCAGGTTTCCCTGCTAACGGGGCCTCATGGGGCAGAAGGGCTTaGAGGCTCGTGGGTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: AVPDEVPGRPGFPANGASWGRRA*RLVGDL Trigger: GAGATCACCCACGAGCCTCAAAGCCCTTCTGCCCCA...TGAGGCCCCGTTAGCAGGGAAACCTGGCCTGCCAGGGACTTCATCAGGGACCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069877.12 |
||
| CDS TCA 90 bp | ACTTCCCAGCAGTCCTTGGGGCAGAAGGGCTTTGAGGCTCGTGGGTaGTCTCAAACCCAAACCCCTCGCCGATCACCACATGCCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSQQSLGQKGFEARG*SQTQTPRRSPHARR Trigger: CCTCCTGGCATGTGGTGATCGGCGAGGGGTTTGGGTTTGAGATCACCCACGAGCCTCAAAGCCCTTCTGCCCCAAGGACTGCTGGGAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069877.12 |
||
| CDS TCA 90 bp | AAGGGCAGGAGATACTTCCCAGCAGTCCTTGGGGCAGAAGGGCTTTaGGGCTCGTGGGTGATCTCAAACCCAAACCCCTCGCCGATCACC | + |
|
Preference number: 5 (lower is better) Translates to: KGRRYFPAVLGAEGL*GSWVISNPNPSPIT Trigger: GGTGATCGGCGAGGGGTTTGGGTTTGAGATCACCCACGAGCCTCAAAGCCCTTCTGCCCCAAGGACTGCTGGGAAGTATCTCCTGCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069877.12 |
||
| CDS-3UTR CAA 90 bp | GTCCCTGATGAAGTCCCTGGCAGGCCAGGTTTCCCTGCTAACGGGGCCTCACGGGAGGAGCCGAACTTCTaGTCCATTGTCTCCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: VPDEVPGRPGFPANGASREEPNF*SIVSLI Trigger: GATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTC...CCGTGAGGCCCCGTTAGCAGGGAAACCTGGCCTGCCAGGGACTTCATCAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
||
| CDS-3UTR CAA 90 bp | CCACAGCTCAGAGCTTGGAGACAACCACGGGGAGCCTGGGCATGGAGAGGTCACGAGGAGCCGAACTTCTaGTCCATTGTCTCCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: PQLRAWRQPRGAWAWRGHEEPNF*SIVSLI Trigger: GATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTC...GTGACCTCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 |
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| CDS GCA 90 bp | GGCTCGTGGGTGATCTCAAACCCAAACCCCTCGCCGATCACCACATaGCAGGAGGAGCCGAACTTCTTGTCCATTGTCTCCTTGATCATC | + |
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Preference number: 5 (lower is better) Translates to: GSWVISNPNPSPITT*QEEPNFLSIVSLII Trigger: GATGATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTCCTGGCATGTGGTGATCGGCGAGGGGTTTGGGTTTGAGATCACCCACGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069877.12 |
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| CDS-3UTR CAA 90 bp | CAGAGATGCCTGTCCACAGCTCAGAGCTTGGAGACAACCACGGGGAGCCTGGGCGCACTCTCATTGTTGTaGGAGAATTTCTCACAGGCT | + |
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Preference number: 5 (lower is better) Translates to: QRCLSTAQSLETTTGSLGALSLL*ENFSQA Trigger: AGCCTGTGAGAAATTCTCCAACAACAATGAGAGTGC...GCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGGCATCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 |
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| CDS-3UTR CAA 90 bp | GGAGCCTGGGCATGGAGAGGTCACCAAGTGGACACTCTGGGTGCGGCTCAGGAATTGTCCATTGTCTCCTaGATCATCTTTGCAGCACTC | + |
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Preference number: 5 (lower is better) Translates to: GAWAWRGHQVDTLGAAQELSIVS*IIFAAL Trigger: GAGTGCTGCAAAGATGATCAAGGAGACAATGGACAA...TTCCTGAGCCGCACCCAGAGTGTCCACTTGGTGACCTCTCCATGCCCAGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 |
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| CDS-3UTR CAA 90 bp | TCACTCCTGGCCCAGGTGTCTCACCGGGAGCTCAGCAACACTTTGACAAGTCGCGAGGAGCCGAACTTCTaGTCCATTGTCTCCTTGATC | + |
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Preference number: 5 (lower is better) Translates to: SLLAQVSHRELSNTLTSREEPNF*SIVSLI Trigger: GATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTC...GCGACTTGTCAAAGTGTTGCTGAGCTCCCGGTGAGACACCTGGGCCAGGAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
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| CDS-3UTR CAA 90 bp | AGATGCCTGTCCACAGCTCAGAGCTTGGAGACAACCACGGGGAGCCTGGGCATGGCCAGCTCCTCATTGTaGTTGGAGAATTTCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: RCLSTAQSLETTTGSLGMASSSL*LENFSQ Trigger: CTGTGAGAAATTCTCCAACAACAATGAGGAGCTGGC...CATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGTGGACAGGCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
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| CDS-3UTR CAA 90 bp | ACAGCTCAGAGCTTGGAGACAACCACGGGGAGCCTGGGCATGGAGAGGTCACCAGCACTCTCATTGTTGTaGGAGAATTTCTCACAGGCT | + |
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Preference number: 5 (lower is better) Translates to: TAQSLETTTGSLGMERSPALSLL*ENFSQA Trigger: AGCCTGTGAGAAATTCTCCAACAACAATGAGAGTGC...TGGTGACCTCTCCATGCCCAGGCTCCCCGTGGTTGTCTCCAAGCTCTGAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 |
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| CDS-3UTR CAA 90 bp | GTTCATGTGGCCCGAGCTGGGAGAAGGGGACAGGAAGACTGTGTGATCCTCGGGGCACTCTCATTGTTGTaGGAGAATTTCTCACAGGCT | + |
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Preference number: 5 (lower is better) Translates to: VHVARAGRRGQEDCVILGALSLL*ENFSQA Trigger: AGCCTGTGAGAAATTCTCCAACAACAATGAGAGTGC...CCCGAGGATCACACAGTCTTCCTGTCCCCTTCTCCCAGCTCGGGCCACATGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
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| CDS TCA 90 bp | CACATGCCAGCTCCTCATTGTTGTTGGAGAATTTCTCACAGGCTGTaGCACACAGCTCCATGGTCTCCACGCGCATCTCCTCTGGCATGT | + |
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Preference number: 5 (lower is better) Translates to: HMPAPHCCWRISHRL*HTAPWSPRASPLAC Trigger: ACATGCCAGAGGAGATGCGCGTGGAGACCATGGAGCTGTGTGTCACAGCCTGTGAGAAATTCTCCAACAACAATGAGGAGCTGGCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
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| CDS-3UTR CAA 90 bp | TACAAATCGCATGCGGTCCCTGATGAAGTCCCTGGCAGGCCAGGTTTCCCTGCTTTGTCCATTGTCTCCTaGATCATCTTTGCAGCACTC | + |
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Preference number: 5 (lower is better) Translates to: YKSHAVPDEVPGRPGFPALSIVS*IIFAAL Trigger: GAGTGCTGCAAAGATGATCAAGGAGACAATGGACAA...AGCAGGGAAACCTGGCCTGCCAGGGACTTCATCAGGGACCGCATGCGATTTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
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| CDS-3UTR CAA 90 bp | CAAACCCAAACCCCTCGCCGATCACCACATGCCAGGAGGAGCCGAACTTCTTGTCATGCCAGCTCCTCATaGTTGTTGGAGAATTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: QTQTPRRSPHARRSRTSCHASSS*LLENFS Trigger: TGAGAAATTCTCCAACAACAATGAGGAGCTGGCATG...ACAAGAAGTTCGGCTCCTCCTGGCATGTGGTGATCGGCGAGGGGTTTGGGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
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| CDS TCA 90 bp | TCTTTGCAGCACTCTCATTGTTGTTGGAGAATTTCTCACAGGCTGTaGCACACAGCTCCATGGTCTCCACGCGCATCTCCTCTGGCATGT | + |
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Preference number: 5 (lower is better) Translates to: SLQHSHCCWRISHRL*HTAPWSPRASPLAC Trigger: ACATGCCAGAGGAGATGCGCGTGGAGACCATGGAGCTGTGTGTCACAGCCTGTGAGAAATTCTCCAACAACAATGAGAGTGCTGCAAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 ENSMUST00000162713.9 |
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| CDS-3UTR CAA 90 bp | TACAAATCGCATGCGGTCCCTGATGAAGTCCCTGGCAGGCCAGGTTTCCCTGCTTTTGCAGCACTCTCATaGTTGTTGGAGAATTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: YKSHAVPDEVPGRPGFPAFAALS*LLENFS Trigger: TGAGAAATTCTCCAACAACAATGAGAGTGCTGCAAA...AGCAGGGAAACCTGGCCTGCCAGGGACTTCATCAGGGACCGCATGCGATTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
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| CDS-3UTR CAA 90 bp | GCCAGCAAGGTAAGAAGTACAAATCGCATGCGGTCCCTGATGAAGTCCCTGGCATTGTCCATTGTCTCCTaGATCATCTTTGCAGCACTC | + |
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Preference number: 5 (lower is better) Translates to: ASKVRSTNRMRSLMKSLALSIVS*IIFAAL Trigger: GAGTGCTGCAAAGATGATCAAGGAGACAATGGACAA...TGCCAGGGACTTCATCAGGGACCGCATGCGATTTGTACTTCTTACCTTGCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
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| CDS-3UTR CAA 90 bp | GGACACTCTGGGTGCGGCTCAGGAAACTGGTACACAAGGACAAAAGAAAAGACTGAGGAGCCGAACTTCTaGTCCATTGTCTCCTTGATC | + |
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Preference number: 5 (lower is better) Translates to: GHSGCGSGNWYTRTKEKTEEPNF*SIVSLI Trigger: GATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTC...AGTCTTTTCTTTTGTCCTTGTGTACCAGTTTCCTGAGCCGCACCCAGAGTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000229644.2 |
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| CDS-3UTR CAA 90 bp | AAAGGTTCATGTGGCCCGAGCTGGGAGAAGGGGACAGGAAGACTGTGTGATCCTTTTGCAGCACTCTCATaGTTGTTGGAGAATTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: KGSCGPSWEKGTGRLCDPFAALS*LLENFS Trigger: TGAGAAATTCTCCAACAACAATGAGAGTGCTGCAAA...AGGATCACACAGTCTTCCTGTCCCCTTCTCCCAGCTCGGGCCACATGAACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 |
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| CDS-3UTR CAA 90 bp | CAGGAGGAGCCGAACTTCTTGTCCATTGTCTCCTTGATCATCTTTGCAGCACTCAGCTCCTCATTGTTGTaGGAGAATTTCTCACAGGCT | + |
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Preference number: 5 (lower is better) Translates to: QEEPNFLSIVSLIIFAALSSSLL*ENFSQA Trigger: AGCCTGTGAGAAATTCTCCAACAACAATGAGGAGCT...GAGTGCTGCAAAGATGATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230645.2 |
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| CDS-3UTR CAA 90 bp | CACAAGGACAAAAGAAAAGACTTGACTCTCCTTGAGAGAGCCAGGCTCTGCCTATTGTCCATTGTCTCCTaGATCATCTTTGCAGCACTC | + |
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Preference number: 5 (lower is better) Translates to: HKDKRKDLTLLERARLCLLSIVS*IIFAAL Trigger: GAGTGCTGCAAAGATGATCAAGGAGACAATGGACAA...TAGGCAGAGCCTGGCTCTCTCAAGGAGAGTCAAGTCTTTTCTTTTGTCCTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000162713.9 ENSMUST00000229644.2 |
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| CDS CCA 72 bp | GACACACAGCTCCATGGTCTCCACGCGCATCTCCTCTaGCATGTCCGAGTGCCTGACCAGGGGGAAGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: DTQLHGLHAHLL*HVRVPDQGEGL Trigger: CAGACCTTCCCCCTGGTCAGGCACTCGGACATGCCAGAGGAGATGCGCGTGGAGACCATGGAGCTGTGTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 ENSMUST00000162713.9 ENSMUST00000230645.2 |
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| CDS CAA 90 bp | CAAGGGCAGGAGATACTTCCCAGCAGTCCTTGGGGCAGAAGGGCTTaGAGGCTCGTGGGTGATCTCAAACCCAAACCCCTCGCCGATCAC | + |
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Preference number: 6 (lower is better) Translates to: QGQEILPSSPWGRRA*RLVGDLKPKPLADH Trigger: GTGATCGGCGAGGGGTTTGGGTTTGAGATCACCCACGAGCCTCAAAGCCCTTCTGCCCCAAGGACTGCTGGGAAGTATCTCCTGCCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069877.12 |
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| CDS TCA 72 bp | CAGTCCTTGGGGCAGAAGGGCTTTGAGGCTCGTGGGTaGTCTCAAACCCAAACCCCTCGCCGATCACCACAT | + |
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Preference number: 6 (lower is better) Translates to: QSLGQKGFEARG*SQTQTPRRSPH Trigger: ATGTGGTGATCGGCGAGGGGTTTGGGTTTGAGATCACCCACGAGCCTCAAAGCCCTTCTGCCCCAAGGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069877.12 |
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| CDS CAA 90 bp | CCAAACCCCTCGCCGATCACCACATGCCAGGAGGAGCCGAACTTCTaGTCCATTGTCTCCTTGATCATCTTTGCAGCACTCCTGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: PNPSPITTCQEEPNF*SIVSLIIFAALLTR Trigger: CCTGGTCAGGAGTGCTGCAAAGATGATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTCCTGGCATGTGGTGATCGGCGAGGGGTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229644.2 |
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| CDS CAA 90 bp | ATCACCACATGCCAGGAGGAGCCGAACTTCTTGTCCATTGTCTCCTaGATCATCTTTGCAGCACTCCTGACCAGGGGGAAGGTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ITTCQEEPNFLSIVS*IIFAALLTRGKVCS Trigger: GCTGCAGACCTTCCCCCTGGTCAGGAGTGCTGCAAAGATGATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTCCTGGCATGTGGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229644.2 |
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| CDS CAA 72 bp | TGCCAGGAGGAGCCGAACTTCTTGTCCATTGTCTCCTaGATCATCTTTGCAGCACTCCTGACCAGGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: CQEEPNFLSIVS*IIFAALLTRGK Trigger: CTTCCCCCTGGTCAGGAGTGCTGCAAAGATGATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTCCTGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229644.2 |
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| CDS CAA 90 bp | CCAAACCCCTCGCCGATCACCACATGCCAGGAGGAGCCGAACTTCTaGTCCATTGTCTCCTTGATCATCTTTGCAGCACTCTCATTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PNPSPITTCQEEPNF*SIVSLIIFAALSLL Trigger: CAACAATGAGAGTGCTGCAAAGATGATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTCCTGGCATGTGGTGATCGGCGAGGGGTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 ENSMUST00000162713.9 |
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| CDS TCA 72 bp | CACTCTCATTGTTGTTGGAGAATTTCTCACAGGCTGTaGCACACAGCTCCATGGTCTCCACGCGCATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: HSHCCWRISHRL*HTAPWSPRASP Trigger: AGGAGATGCGCGTGGAGACCATGGAGCTGTGTGTCACAGCCTGTGAGAAATTCTCCAACAACAATGAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 ENSMUST00000162713.9 |
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| CDS TCA 72 bp | GCCAGGAGGAGCCGAACTTCTTGTCCATTGTCTCCTTaGTCATCTTTGCAGCACTCTCATTGTTGTTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: ARRSRTSCPLSP*SSLQHSHCCWR Trigger: TCTCCAACAACAATGAGAGTGCTGCAAAGATGATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTCCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 ENSMUST00000162713.9 |
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| CDS CAA 72 bp | TGCCAGGAGGAGCCGAACTTCTTGTCCATTGTCTCCTaGATCATCTTTGCAGCACTCTCATTGTTGTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: CQEEPNFLSIVS*IIFAALSLLLE Trigger: CTCCAACAACAATGAGAGTGCTGCAAAGATGATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTCCTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 ENSMUST00000162713.9 |
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| CDS CAA 90 bp | ATCACCACATGCCAGGAGGAGCCGAACTTCTTGTCCATTGTCTCCTaGATCATCTTTGCAGCACTCTCATTGTTGTTGGAGAATTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: ITTCQEEPNFLSIVS*IIFAALSLLLENFS Trigger: TGAGAAATTCTCCAACAACAATGAGAGTGCTGCAAAGATGATCAAGGAGACAATGGACAAGAAGTTCGGCTCCTCCTGGCATGTGGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023055.8 ENSMUST00000069877.12 ENSMUST00000162713.9 |
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