Pregenerated sensors for DNAL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042523Ensembl transcript IDs: ENSMUST00000123491.8, ENSMUST00000136159.2, ENSMUST00000140812.2, ENSMUST00000156138.8
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGTCCAGAAAAGGACATCAGAGCCCCTGGAGGTCCAGAGGGCTGTaGGCCTCCTCATGGTACTGGGAAGCAAGCTCAGGTCCTGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: RSRKGHQSPWRSRGL*ASSWYWEASSGPEQ Trigger: TTGCTCAGGACCTGAGCTTGCTTCCCAGTACCATGAGGAGGCTCACAGCCCTCTGGACCTCCAGGGGCTCTGATGTCCTTTTCTGGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR CCA 90 bp | GGTACCTTCTGCTCTCCACTGGCCATTGGCAGGAGTGGTCCCACTTaGCAACAGCGTCATAGGCAGGGTCTCCCACTGACTGGAGACATA | + |
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Preference number: 1 (lower is better) Translates to: GTFCSPLAIGRSGPT*QQRHRQGLPLTGDI Trigger: TATGTCTCCAGTCAGTGGGAGACCCTGCCTATGACGCTGTTGCCAAGTGGGACCACTCCTGCCAATGGCCAGTGGAGAGCAGAAGGTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR CCA 90 bp | GCGAATGATGCTCCTGGCCATGAACGACAACCTGAGAGAAGCAGGTaGACTGGGTACCTTCTGCTCTCCACTGGCCATTGGCAGGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: ANDAPGHERQPERSR*TGYLLLSTGHWQEW Trigger: CCACTCCTGCCAATGGCCAGTGGAGAGCAGAAGGTACCCAGTCCACCTGCTTCTCTCAGGTTGTCGTTCATGGCCAGGAGCATCATTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR TCA 90 bp | AGGGCTGTGAGCCTCCTCATGGTACTGGGAAGCAAGCTCAGGTCCTaGGCAACAGGTACTCTTACCTCTGAGCTGTCTCACCAGCCCACA | + |
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Preference number: 1 (lower is better) Translates to: RAVSLLMVLGSKLRS*ATGTLTSELSHQPT Trigger: TGTGGGCTGGTGAGACAGCTCAGAGGTAAGAGTACCTGTTGCTCAGGACCTGAGCTTGCTTCCCAGTACCATGAGGAGGCTCACAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR GCA 90 bp | ATCTGTAAGTCACTTCACAGAGCCAGTCTGAAGCCATCCCCTTCCTaGCCTCACTCCAGGTGTGTCGCAGGAAGCACAGCATCAGCGGGA | + |
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Preference number: 1 (lower is better) Translates to: ICKSLHRASLKPSPS*PHSRCVAGSTASAG Trigger: TCCCGCTGATGCTGTGCTTCCTGCGACACACCTGGAGTGAGGGCAGGAAGGGGATGGCTTCAGACTGGCTCTGTGAAGTGACTTACAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR GCA 90 bp | ACCTCGTCGGCTGCCACACACAACCCGACTCTGCTGCCCGGCTGTTaGTTCATTAGTCACAGACTCATTCTCGGCCCACACAAAGGACAT | + |
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Preference number: 1 (lower is better) Translates to: TSSAATHNPTLLPGC*FISHRLILGPHKGH Trigger: ATGTCCTTTGTGTGGGCCGAGAATGAGTCTGTGACTAATGAAGCAACAGCCGGGCAGCAGAGTCGGGTTGTGTGTGGCAGCCGACGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR TCA 90 bp | GACAGGGCTGCAGCTAACCTGCACACAGTGCACGGCCCACAAGAGTaGGTCATACAGCCTAAATGTAAACAGCGCCACACTGAGCATCTC | + |
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Preference number: 1 (lower is better) Translates to: DRAAANLHTVHGPQE*VIQPKCKQRHTEHL Trigger: GAGATGCTCAGTGTGGCGCTGTTTACATTTAGGCTGTATGACTCACTCTTGTGGGCCGTGCACTGTGTGCAGGTTAGCTGCAGCCCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR TCA 90 bp | CCACATTTAGGTCAGCCCCAGGAAGCATTCCAAGTAACTGAGCGGTaGGGGACAGCACCCTTCTGGTCAGTTGCACTGGACATCTGCATC | + |
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Preference number: 1 (lower is better) Translates to: PHLGQPQEAFQVTER*GTAPFWSVALDICI Trigger: GATGCAGATGTCCAGTGCAACTGACCAGAAGGGTGCTGTCCCTCACCGCTCAGTTACTTGGAATGCTTCCTGGGGCTGACCTAAATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR TCA 90 bp | TCCAGAGCCACATTTAGGTCAGCCCCAGGAAGCATTCCAAGTAACTaGGCGGTGAGGGACAGCACCCTTCTGGTCAGTTGCACTGGACAT | + |
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Preference number: 1 (lower is better) Translates to: SRATFRSAPGSIPSN*AVRDSTLLVSCTGH Trigger: ATGTCCAGTGCAACTGACCAGAAGGGTGCTGTCCCTCACCGCTCAGTTACTTGGAATGCTTCCTGGGGCTGACCTAAATGTGGCTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR GCA 90 bp | CTCCAGGTGTGTCGCAGGAAGCACAGCATCAGCGGGAACAGGGCTTaGCTGTGTAAACTACAAGCAACCACAACAGTGTCTCCTAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: LQVCRRKHSISGNRA*LCKLQATTTVSPKL Trigger: AAGCTTAGGAGACACTGTTGTGGTTGCTTGTAGTTTACACAGGCAAGCCCTGTTCCCGCTGATGCTGTGCTTCCTGCGACACACCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR GCA 90 bp | GCTTTTTCAGCTTGGGCACTCTCTTGGTTGCTTCATCGATCCAGTTaGCCTCGGCAGAGTGTTTCTCCTCCAGGGGATTACCGACGAACA | + |
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Preference number: 1 (lower is better) Translates to: AFSAWALSWLLHRSS*PRQSVSPPGDYRRT Trigger: TGTTCGTCGGTAATCCCCTGGAGGAGAAACACTCTGCCGAGGGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCTGAAAAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156138.8 |
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| 3UTR GCA 90 bp | CAGGAAGCCTCAGGACATCTCATTTCTCACTGTGTGCATGCGCCGTaGCTGTGTACATGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGT | + |
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Preference number: 1 (lower is better) Translates to: QEASGHLISHCVHAP*LCTCVCVCERERES Trigger: ACTCTCTCTCTCTCTCTCACACACACACACACATGTACACAGGCACGGCGCATGCACACAGTGAGAAATGAGATGTCCTGAGGCTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
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| 3UTR CCA 90 bp | ACTAGGGAGGCAGAGACAGGTGGATCTCTGTGTTTGATGCTAGCCTaGTCTACATACAGAGTAAGTCCCAAGACTGCCTGGGAAACCCTG | + |
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Preference number: 1 (lower is better) Translates to: TREAETGGSLCLMLA*STYRVSPKTAWETL Trigger: CAGGGTTTCCCAGGCAGTCTTGGGACTTACTCTGTATGTAGACCAGGCTAGCATCAAACACAGAGATCCACCTGTCTCTGCCTCCCTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR CCA 90 bp | AGGGACAAGAATCGGCAGCCTCTGGCTGAGACTTTAGGCACAGGTTaGCAGCGGTTCCTGACTACTCCACAATCAGTCAATAATTCTATC | + |
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Preference number: 1 (lower is better) Translates to: RDKNRQPLAETLGTG*QRFLTTPQSVNNSI Trigger: GATAGAATTATTGACTGATTGTGGAGTAGTCAGGAACCGCTGCCAACCTGTGCCTAAAGTCTCAGCCAGAGGCTGCCGATTCTTGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR GCA 90 bp | GTGTTTGATGCTAGCCTGGTCTACATACAGAGTAAGTCCCAAGACTaGCTGGGAAACCCTGTCTTGAACAACCAAAACCAAACTAAACCA | + |
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Preference number: 1 (lower is better) Translates to: VFDASLVYIQSKSQD*LGNPVLNNQNQTKP Trigger: TGGTTTAGTTTGGTTTTGGTTGTTCAAGACAGGGTTTCCCAGGCAGTCTTGGGACTTACTCTGTATGTAGACCAGGCTAGCATCAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR GCA 90 bp | TGTTCTATCAGGCTAAAAGTCTATAGTTTTTCCTGTCTGCTTCCTTaGTTACAGTTAGTGATGGACACAGACATGGAACTCGGAAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: CSIRLKVYSFSCLLP*LQLVMDTDMELGRL Trigger: CAGCCTTCCGAGTTCCATGTCTGTGTCCATCACTAACTGTAAGCAAGGAAGCAGACAGGAAAAACTATAGACTTTTAGCCTGATAGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR CCA 90 bp | AAGACATTGAGAAATAGGGGAGGGGTGTTTCCCAACTACAGAATTTaGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: KTLRNRGGVFPNYRI*KQTHICKSLHRASL Trigger: CAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCTGTAGTTGGGAAACACCCCTCCCCTATTTCTCAATGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR TCA 90 bp | ACCTCAGTCAGAGACAAGAACTCCTCAACCATTTTTCAAAGTGAATaGTTACATGCAAACTGTCTAGGCCGGCTAACTGCTTTGTTTGTT | + |
|
Preference number: 1 (lower is better) Translates to: TSVRDKNSSTIFQSE*LHANCLGRLTALFV Trigger: AACAAACAAAGCAGTTAGCCGGCCTAGACAGTTTGCATGTAATCATTCACTTTGAAAAATGGTTGAGGAGTTCTTGTCTCTGACTGAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR TCA 90 bp | CTTGAGGACCACTGGCCTATAAACATTTCCTCATGGCTTATTCTATaGTGGCATCATCCAAGAGAGGTATTAAGAATGTCTTATAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: LEDHWPINISSWLIL*WHHPREVLRMSYRE Trigger: TTCCCTATAAGACATTCTTAATACCTCTCTTGGATGATGCCATCATAGAATAAGCCATGAGGAAATGTTTATAGGCCAGTGGTCCTCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
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| 3UTR CAA 90 bp | CAGAGGAATGCTGGGACAGGAAACACTGGCTCCTATCTAGAGAATTaGGCTGTCCCACCTGCTCCAGGGCTCAGTGGGCAACGCTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: QRNAGTGNTGSYLEN*AVPPAPGLSGQRLQ Trigger: CTGCAAGCGTTGCCCACTGAGCCCTGGAGCAGGTGGGACAGCCAAATTCTCTAGATAGGAGCCAGTGTTTCCTGTCCCAGCATTCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTGCTCTCCACTGGCCATTGGCAGGAGTGGTCCCACTTGGCAACAGCGTCAGCGGGAACAGGGCTTaGCTGTGTAAACTACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: PSALHWPLAGVVPLGNSVSGNRA*LCKLQA Trigger: TGCTTGTAGTTTACACAGGCAAGCCCTGTTCCCGCT...GACGCTGTTGCCAAGTGGGACCACTCCTGCCAATGGCCAGTGGAGAGCAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTGCTCTCCACTGGCCATTGGCAGGAGTGGTCCCACTTGGCAACAGCGTCAGAAACAAAAGACTCTaGCCCCTTCACTGTGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: PSALHWPLAGVVPLGNSVRNKRL*PLHCGD Trigger: GTCACCACAGTGAAGGGGGCAGAGTCTTTTGTTTCT...GACGCTGTTGCCAAGTGGGACCACTCCTGCCAATGGCCAGTGGAGAGCAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR-3UTR TCA 90 bp | GCCATCCCCTTCCTGCCCTCACTCCAGGTGTGTCGCAGGAAGCACAGCATCAGCCCATTCTTCCTTTTCTaGGCAGTGTTTCCAACTAGA | + |
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Preference number: 2 (lower is better) Translates to: AIPFLPSLQVCRRKHSISPFFLF*AVFPTR Trigger: TCTAGTTGGAAACACTGCTCAGAAAAGGAAGAATGG...GCTGATGCTGTGCTTCCTGCGACACACCTGGAGTGAGGGCAGGAAGGGGATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTGCTCTCCACTGGCCATTGGCAGGAGTGGTCCCACTTGGCAACAGCGTCAACCTACACTCCAGTTaGCAGTGCACACATTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: PSALHWPLAGVVPLGNSVNLHSS*QCTHFW Trigger: CCAAAAATGTGTGCACTGTCAACTGGAGTGTAGGTT...GACGCTGTTGCCAAGTGGGACCACTCCTGCCAATGGCCAGTGGAGAGCAGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTGCTCTCCACTGGCCATTGGCAGGAGTGGTCCCACTTGGCAACAGCGTCCACCGTGCACATCTCTaGGAACCATCAGTGAATAAA | + |
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Preference number: 2 (lower is better) Translates to: PSALHWPLAGVVPLGNSVHRAHL*EPSVNK Trigger: TTTATTCACTGATGGTTCTCAGAGATGTGCACGGTG...GACGCTGTTGCCAAGTGGGACCACTCCTGCCAATGGCCAGTGGAGAGCAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGAATGCTGGGACAGGAAACACTGGCTCCTATCTAGAGAATTTGGCTGTCCCAAGCCATCCCCTTCCTaGCCTCACTCCAGGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: EECWDRKHWLLSREFGCPKPSPS*PHSRCV Trigger: GACACACCTGGAGTGAGGGCAGGAAGGGGATGGCTT...GGGACAGCCAAATTCTCTAGATAGGAGCCAGTGTTTCCTGTCCCAGCATTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR CAA 90 bp | AGCTTTTTCAGCTTGGGCACTCTCTTGGTTGCTTCATCGATCCAGTaGCCCTCGGCAGAGTGTTTCTCCTCCAGGGGATTACCGACGAAC | + |
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Preference number: 2 (lower is better) Translates to: SFFSLGTLLVASSIQ*PSAECFSSRGLPTN Trigger: GTTCGTCGGTAATCCCCTGGAGGAGAAACACTCTGCCGAGGGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCTGAAAAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156138.8 |
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| 3UTR-3UTR TCA 90 bp | TATCTAGAGAATTTGGCTGTCCCACCTGCTCCAGGGCTCAGTGGGCAACGCTTGGAAGAAAATAGACCATaGGCCAAGAAGCCTCCACGG | + |
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Preference number: 2 (lower is better) Translates to: YLENLAVPPAPGLSGQRLEENRP*AKKPPR Trigger: CCGTGGAGGCTTCTTGGCTCATGGTCTATTTTCTTC...CAAGCGTTGCCCACTGAGCCCTGGAGCAGGTGGGACAGCCAAATTCTCTAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGGCCAGAAAAGGACATGAGAGTCCCTGGAGGTCCAGAAAAGGACATCAGAGCAAGCTCAGGTCCTaGGCAACAGGTACTCTTACC | + |
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Preference number: 2 (lower is better) Translates to: WEARKGHESPWRSRKGHQSKLRS*ATGTLT Trigger: GGTAAGAGTACCTGTTGCTCAGGACCTGAGCTTGCT...CTGATGTCCTTTTCTGGACCTCCAGGGACTCTCATGTCCTTTTCTGGCCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTCTGCTCTCCACTGGCCATTGGCAGGAGTGGTCCCACTTGGCAACAGCGTCAAGTCTCACCACTGTTaGTCAGAAGAGAAATGCCAA | + |
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Preference number: 2 (lower is better) Translates to: PSALHWPLAGVVPLGNSVKSHHC*SEEKCQ Trigger: TTGGCATTTCTCTTCTGAGCAACAGTGGTGAGACTT...GACGCTGTTGCCAAGTGGGACCACTCCTGCCAATGGCCAGTGGAGAGCAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAACTCGGAACAGCTACCTCAGTCAGAGACAAGAACTCCTCAACCATTTTTCAGGTCCAGAGGGCTGTaGGCCTCCTCATGGTACTGG | + |
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Preference number: 2 (lower is better) Translates to: VNSEQLPQSETRTPQPFFRSRGL*ASSWYW Trigger: CCAGTACCATGAGGAGGCTCACAGCCCTCTGGACCT...GAAAAATGGTTGAGGAGTTCTTGTCTCTGACTGAGGTAGCTGTTCCGAGTTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR CAA 90 bp | TTACTGGAGTACCATCCAGCTTTTTCAGCTTGGGCACTCTCTTGGTaGCTTCATCGATCCAGTTGCCCTCGGCAGAGTGTTTCTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LLEYHPAFSAWALSW*LHRSSCPRQSVSPP Trigger: TGGAGGAGAAACACTCTGCCGAGGGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCTGAAAAAGCTGGATGGTACTCCAGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156138.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCACCACGCTGCCTCTGAAGCAATGCGTGCTGCATTTGTGCTTCTGACTTGTGCTTGGGCACTCTCTTaGTTGCTTCATCGATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SHHAASEAMRAAFVLLTCAWALS*LLHRSS Trigger: ACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGC...ACAAGTCAGAAGCACAAATGCAGCACGCATTGCTTCAGAGGCAGCGTGGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156138.8 |
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| 3UTR CAA 90 bp | CATGGATATCTGAGACTGACTGTGGGAAGGACAGGTTTTCTCCCCTaGCCGTTACTGTTTACCGTCTCAGTGAACTCGGAACAGCTACCT | + |
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Preference number: 2 (lower is better) Translates to: HGYLRLTVGRTGFLP*PLLFTVSVNSEQLP Trigger: AGGTAGCTGTTCCGAGTTCACTGAGACGGTAAACAGTAACGGCAAGGGGAGAAAACCTGTCCTTCCCACAGTCAGTCTCAGATATCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR-3UTR TCA 90 bp | AGCGGCATCCATGGTGCACAACCTACACTCCAGTTGACAGTGCACACATTTTTGGAAGAAAATAGACCATaGGCCAAGAAGCCTCCACGG | + |
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Preference number: 2 (lower is better) Translates to: SGIHGAQPTLQLTVHTFLEENRP*AKKPPR Trigger: CCGTGGAGGCTTCTTGGCTCATGGTCTATTTTCTTC...CAAAAATGTGTGCACTGTCAACTGGAGTGTAGGTTGTGCACCATGGATGCCGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR-3UTR GCA 90 bp | AGCGGCATCCATGGTGCACAACCTACACTCCAGTTGACAGTGCACACATTTTTGCTGCCTCTGAAGCAATaGGTGCTGCATTTGTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: SGIHGAQPTLQLTVHTFLLPLKQ*VLHLCF Trigger: GAAGCACAAATGCAGCACGCATTGCTTCAGAGGCAG...CAAAAATGTGTGCACTGTCAACTGGAGTGTAGGTTGTGCACCATGGATGCCGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGAATGCTGGGACAGGAAACACTGGCTCCTATCTAGAGAATTTGGCTGTCCCCACAGAAAAGCACCGTaGACATCTCTGAGAACCATC | + |
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Preference number: 2 (lower is better) Translates to: EECWDRKHWLLSREFGCPHRKAP*TSLRTI Trigger: GATGGTTCTCAGAGATGTGCACGGTGCTTTTCTGTG...GGGACAGCCAAATTCTCTAGATAGGAGCCAGTGTTTCCTGTCCCAGCATTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAATGAACATGGATCTAGAAGTCAAAGCTTTGCGAATGATGCTCCTGGCCATCCTTCTGCTCTCCACTaGCCATTGGCAGGAGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: QNEHGSRSQSFANDAPGHPSALH*PLAGVV Trigger: GACCACTCCTGCCAATGGCCAGTGGAGAGCAGAAGG...ATGGCCAGGAGCATCATTCGCAAAGCTTTGACTTCTAGATCCATGTTCATTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| 3UTR CAA 90 bp | TTAATTACTGGAGTACCATCCAGCTTTTTCAGCTTGGGCACTCTCTaGGTTGCTTCATCGATCCAGTTGCCCTCGGCAGAGTGTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LITGVPSSFFSLGTL*VASSIQLPSAECFS Trigger: GGAGAAACACTCTGCCGAGGGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCTGAAAAAGCTGGATGGTACTCCAGTAATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156138.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTCACCAGCCCACAACCAGACATTCTTGTATGGATTTAGAGTTGATTGTCAATCGGCAGCCTCTGGCTaGGACTTTAGGCACAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: VSPAHNQTFLYGFRVDCQSAASG*DFRHRL Trigger: CAACCTGTGCCTAAAGTCTCAGCCAGAGGCTGCCGA...TTGACAATCAACTCTAAATCCATACAAGAATGTCTGGTTGTGGGCTGGTGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCATTTAGTGTCTCACCTCCATGTCTGTCTGTGCAACATGTGTGTGGGAGGCTGTGCAACATGTGTGTaGGAGGCCAGAAAAGGACAT | + |
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Preference number: 2 (lower is better) Translates to: MHLVSHLHVCLCNMCVGGCATCV*EARKGH Trigger: ATGTCCTTTTCTGGCCTCCCACACACATGTTGCACA...GCCTCCCACACACATGTTGCACAGACAGACATGGAGGTGAGACACTAAATGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR CAA 90 bp | CTGTCTCACCAGCCCACAACCAGACATTCTTGTATGGATTTAGAGTaGATTGTCAAAGCAGTGGTCCCTTCTGACCAGCGTGACTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: LSHQPTTRHSCMDLE*IVKAVVPSDQRDSY Trigger: GTAAGAGTCACGCTGGTCAGAAGGGACCACTGCTTTGACAATCAACTCTAAATCCATACAAGAATGTCTGGTTGTGGGCTGGTGAGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCAAGAAGCCTCCACGGCAGCCATTCTTCCTTTTCTGAGCAGTGTTTCCAACCCATTCTTCCTTTTCTaGGCAGTGTTTCCAACTAGA | + |
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Preference number: 2 (lower is better) Translates to: SQEASTAAILPFLSSVSNPFFLF*AVFPTR Trigger: TCTAGTTGGAAACACTGCTCAGAAAAGGAAGAATGG...GTTGGAAACACTGCTCAGAAAAGGAAGAATGGCTGCCGTGGAGGCTTCTTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCATTTAGTGTCTCACCTCCATGTCTGTCTGTGCAACATGTGTGTGGGAGGCGACTTCATCTGGTGCTaGTGCCATTTTACAGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: MHLVSHLHVCLCNMCVGGDFIWC*CHFTGF Trigger: GAAACCTGTAAAATGGCATCAGCACCAGATGAAGTC...GCCTCCCACACACATGTTGCACAGACAGACATGGAGGTGAGACACTAAATGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR-3UTR TCA 90 bp | GGAACAGGGCTTGCCTGTGTAAACTACAAGCAACCACAACAGTGTCTCCTAAGCCACCGTGCACATCTCTaGGAACCATCAGTGAATAAA | + |
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Preference number: 2 (lower is better) Translates to: GTGLACVNYKQPQQCLLSHRAHL*EPSVNK Trigger: TTTATTCACTGATGGTTCTCAGAGATGTGCACGGTG...GCTTAGGAGACACTGTTGTGGTTGCTTGTAGTTTACACAGGCAAGCCCTGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTTGATGCTAGCCTGGTCTACATACAGAGTAAGTCCCAAGACTGCCTGGGAAACCATTGTCCTAACATaGGCAGGGGACAAGAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: CLMLAWSTYRVSPKTAWETIVLT*AGDKKL Trigger: GAGTTTCTTGTCCCCTGCTCATGTTAGGACAATGGT...TTCCCAGGCAGTCTTGGGACTTACTCTGTATGTAGACCAGGCTAGCATCAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR GCA 90 bp | TCGGAACAGCTACCTCAGTCAGAGACAAGAACTCCTCAACCATTTTTCAAAGTGCTCCATGTCTGTCTGTaGAACATGTGTGTGGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SEQLPQSETRTPQPFFKVLHVCL*NMCVGG Trigger: GCCTCCCACACACATGTTGCACAGACAGACATGGAG...CACTTTGAAAAATGGTTGAGGAGTTCTTGTCTCTGACTGAGGTAGCTGTTCCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAAAGGGCATCTGGGTAAATCATGAGGGTGAAGGTTTTCAAAATCTCAGTGGTCTTAAGCGGCATCCATaGTGCACAACCTACACTCCA | + |
|
Preference number: 2 (lower is better) Translates to: AKGIWVNHEGEGFQNLSGLKRHP*CTTYTP Trigger: TGGAGTGTAGGTTGTGCACCATGGATGCCGCTTAAG...ACCACTGAGATTTTGAAAACCTTCACCCTCATGATTTACCCAGATGCCCTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAACAAACAAAATGCACATTCCCATGACACGGGTGTGTCACACAGCTGTGGCAGTCCTTGAGGACCACTaGCCTATAAACATTTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: QTNKMHIPMTRVCHTAVAVLEDH*PINISS Trigger: TGAGGAAATGTTTATAGGCCAGTGGTCCTCAAGGAC...TGCCACAGCTGTGTGACACACCCGTGTCATGGGAATGTGCATTTTGTTTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGACTTCATCTGGTGCTGATGCCATTTTACAGGTTTCAGAATATTTTTCTTACTCGGCAGCCTCTGGCTaGGACTTTAGGCACAGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: ETSSGADAILQVSEYFSYSAASG*DFRHRL Trigger: CAACCTGTGCCTAAAGTCTCAGCCAGAGGCTGCCGA...GTAAGAAAAATATTCTGAAACCTGTAAAATGGCATCAGCACCAGATGAAGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAATTTGGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTGAAGAGCAAGCTCAGGTCCTaGGCAACAGGTACTCTTACC | + |
|
Preference number: 2 (lower is better) Translates to: RIWKQTHICKSLHRASLKSKLRS*ATGTLT Trigger: GGTAAGAGTACCTGTTGCTCAGGACCTGAGCTTGCT...CTTCAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTCACCAGCCCACAACCAGACATTCTTGTATGGATTTAGAGTTGATTGTCAACTGCCTCTGAAGCAATaGGTGCTGCATTTGTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: VSPAHNQTFLYGFRVDCQLPLKQ*VLHLCF Trigger: GAAGCACAAATGCAGCACGCATTGCTTCAGAGGCAG...TTGACAATCAACTCTAAATCCATACAAGAATGTCTGGTTGTGGGCTGGTGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTCTGGTCAGTTGCACTGGACATCTGCATCAGCTAACTTCTGGGCACGAGCAATTCACACTTAACTATTaGTTTGCAGGTCTGAGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LLVSCTGHLHQLTSGHEQFTLNY*FAGLRL Trigger: TAACCTCAGACCTGCAAAGCAATAGTTAAGTGTGAA...TTGCTCGTGCCCAGAAGTTAGCTGATGCAGATGTCCAGTGCAACTGACCAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAGCCGCATCAAAGTCATTCCAATATTTGTGATGAGGAGCCGAAAATGTTTCTCCATGTCTGTCTGTaGAACATGTGTGTGGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: TEPHQSHSNICDEEPKMFLHVCL*NMCVGG Trigger: GCCTCCCACACACATGTTGCACAGACAGACATGGAG...AAACATTTTCGGCTCCTCATCACAAATATTGGAATGACTTTGATGCGGCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR GCA 90 bp | TACAGAATTTGGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTGGGGCACTCTCTTGGTTaGTTCATCGATCCAGTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: YRIWKQTHICKSLHRASLGHSLG*FIDPVA Trigger: GGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCC...CAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156138.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCTCAAGAAAAACCCAGGTAAAAGACTCCCTGCTTTCTCTGTCACCAACTCTGGGACTTGACTACAATTaGTGCTACTGGTTTGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: TSRKTQVKDSLLSLSPTLGLDYN*CYWFVG Trigger: TCCCACAAACCAGTAGCACCAATTGTAGTCAAGTCC...CAGAGTTGGTGACAGAGAAAGCAGGGAGTCTTTTACCTGGGTTTTTCTTGAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAATTTGGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTGAAGGGACATCAGAGCCCCTaGAGGTCCAGAAAAGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: RIWKQTHICKSLHRASLKGHQSP*RSRKGH Trigger: ATGTCCTTTTCTGGACCTCCAGGGGCTCTGATGTCC...CTTCAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGGTGTTTCCCAACTACAGAATTTGGAAACAAACACACATCTGTAAGTCACGGCCTGAACCTTCTATaGATGGCAAAGTCGTCTATC | + |
|
Preference number: 2 (lower is better) Translates to: EGCFPTTEFGNKHTSVSHGLNLL*MAKSSI Trigger: GATAGACGACTTTGCCATCCATAGAAGGTTCAGGCC...GTGACTTACAGATGTGTGTTTGTTTCCAAATTCTGTAGTTGGGAAACACCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR CAA 90 bp | GTTAAAACGTTCTTCAGAATGAACATGGATCTAGAAGTCAAAGCTTaGCGAATGATGCTCCTGGCCATGAACGACAACCTGAGAGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: VKTFFRMNMDLEVKA*RMMLLAMNDNLREA Trigger: TGCTTCTCTCAGGTTGTCGTTCATGGCCAGGAGCATCATTCGCAAAGCTTTGACTTCTAGATCCATGTTCATTCTGAAGAACGTTTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCTCACCAGCCCACAACCAGACATTCTTGTATGGATTTAGAGTTGATTGTCAAGACTTCATCTGGTGCTaGTGCCATTTTACAGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: VSPAHNQTFLYGFRVDCQDFIWC*CHFTGF Trigger: GAAACCTGTAAAATGGCATCAGCACCAGATGAAGTC...TTGACAATCAACTCTAAATCCATACAAGAATGTCTGGTTGTGGGCTGGTGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR CCA 90 bp | TCGGAACAGCTACCTCAGTCAGAGACAAGAACTCCTCAACCATTTTTCAAAGTGAAAGCAAAGGGCATCTaGGTAAATCATGAGGGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SEQLPQSETRTPQPFFKVKAKGI*VNHEGE Trigger: TTCACCCTCATGATTTACCCAGATGCCCTTTGCTTT...CACTTTGAAAAATGGTTGAGGAGTTCTTGTCTCTGACTGAGGTAGCTGTTCCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAATTTGGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTGAAGTCTATCTTGACCCACTaGAGACTTCATCTGGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RIWKQTHICKSLHRASLKSILTH*RLHLVL Trigger: CAGCACCAGATGAAGTCTCCAGTGGGTCAAGATAGA...CTTCAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAACTCGGAACAGCTACCTCAGTCAGAGACAAGAACTCCTCAACCATTTTTCTCCACAGCACTTACATaGTACACTTTAAAAGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: VNSEQLPQSETRTPQPFFSTALT*YTLKAV Trigger: AACAGCTTTTAAAGTGTATCATGTAAGTGCTGTGGA...GAAAAATGGTTGAGGAGTTCTTGTCTCTGACTGAGGTAGCTGTTCCGAGTTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR CCA 90 bp | AATCATGAGGGTGAAGGTTTTCAAAATCTCAGTGGTCGATACTTAGGACTATTGGGCCTGAACCTTCTATaGATGGCAAAGTCGTCTATC | + |
|
Preference number: 2 (lower is better) Translates to: NHEGEGFQNLSGRYLGLLGLNLL*MAKSSI Trigger: GATAGACGACTTTGCCATCCATAGAAGGTTCAGGCC...CAATAGTCCTAAGTATCGACCACTGAGATTTTGAAAACCTTCACCCTCATGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAATGAACATGGATCTAGAAGTCAAAGCTTTGCGAATGATGCTCCTGGCCATGAAAAATTAAAATACTaGGTGTTCCTGCACCCTACC | + |
|
Preference number: 2 (lower is better) Translates to: QNEHGSRSQSFANDAPGHEKLKY*VFLHPT Trigger: GGTAGGGTGCAGGAACACCCAGTATTTTAATTTTTC...ATGGCCAGGAGCATCATTCGCAAAGCTTTGACTTCTAGATCCATGTTCATTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAATGAACATGGATCTAGAAGTCAAAGCTTTGCGAATGATGCTCCTGGCCATCCCAACTACAGAATTTaGAAACAAACACACATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: QNEHGSRSQSFANDAPGHPNYRI*KQTHIC Trigger: ACAGATGTGTGTTTGTTTCCAAATTCTGTAGTTGGG...ATGGCCAGGAGCATCATTCGCAAAGCTTTGACTTCTAGATCCATGTTCATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCTCACCAGCCCACAACCAGACATTCTTGTATGGATTTAGAGTTGATTGTCAATCCACAGCACTTACATaGTACACTTTAAAAGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: VSPAHNQTFLYGFRVDCQSTALT*YTLKAV Trigger: AACAGCTTTTAAAGTGTATCATGTAAGTGCTGTGGA...TTGACAATCAACTCTAAATCCATACAAGAATGTCTGGTTGTGGGCTGGTGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGACTTCATCTGGTGCTGATGCCATTTTACAGGTTTCAGAATATTTTTCTTACGGACTTGACTACAATTaGTGCTACTGGTTTGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: ETSSGADAILQVSEYFSYGLDYN*CYWFVG Trigger: TCCCACAAACCAGTAGCACCAATTGTAGTCAAGTCC...GTAAGAAAAATATTCTGAAACCTGTAAAATGGCATCAGCACCAGATGAAGTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR GCA 90 bp | TACAGAATTTGGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTGTTCACACTTAACTATTaGTTTGCAGGTCTGAGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: YRIWKQTHICKSLHRASLFTLNY*FAGLRL Trigger: TAACCTCAGACCTGCAAAGCAATAGTTAAGTGTGAA...CAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAATTTGGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTGAAGCCCAACTACAGAATTTaGAAACAAACACACATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RIWKQTHICKSLHRASLKPNYRI*KQTHIC Trigger: ACAGATGTGTGTTTGTTTCCAAATTCTGTAGTTGGG...CTTCAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR CCA 90 bp | AACCAAACCAAAGTTTCTATTCTAAATAGAAAAGCTATTTACACCCTCCCAGAGACATCTATTCCAAGTTaGTTCCATCTCCAATCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: NQTKVSILNRKAIYTLPETSIPS*FHLQSE Trigger: TTCAGATTGGAGATGGAACCAACTTGGAATAGATGT...CTCTGGGAGGGTGTAAATAGCTTTTCTATTTAGAATAGAAACTTTGGTTTGGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCCCCTGGAGGTCCAGAGGGCTGTGAGCCTCCTCATGGTACTGGGAAGCAAAGCTTGGGCACTCTCTaGGTTGCTTCATCGATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RAPGGPEGCEPPHGTGKQSLGTL*VASSIQ Trigger: CTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCT...TTGCTTCCCAGTACCATGAGGAGGCTCACAGCCCTCTGGACCTCCAGGGGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156138.8 |
||
| 3UTR TCA 72 bp | AAAGGACATCAGAGCCCCTGGAGGTCCAGAGGGCTGTaGGCCTCCTCATGGTACTGGGAAGCAAGCTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: KGHQSPWRSRGL*ASSWYWEASSG Trigger: ACCTGAGCTTGCTTCCCAGTACCATGAGGAGGCTCACAGCCCTCTGGACCTCCAGGGGCTCTGATGTCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR TCA 72 bp | GGTCAGCCCCAGGAAGCATTCCAAGTAACTGAGCGGTaGGGGACAGCACCCTTCTGGTCAGTTGCACTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GQPQEAFQVTER*GTAPFWSVALD Trigger: GTCCAGTGCAACTGACCAGAAGGGTGCTGTCCCTCACCGCTCAGTTACTTGGAATGCTTCCTGGGGCTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR TCA 72 bp | AGCTGTTCACACTGGGTAAGGAAGGGTAAAGGGCCATaGCCTCGTCGGCTGCCACACACAACCCGACTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SCSHWVRKGKGP*PRRLPHTTRLC Trigger: GCAGAGTCGGGTTGTGTGTGGCAGCCGACGAGGTCATGGCCCTTTACCCTTCCTTACCCAGTGTGAACAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR GCA 72 bp | TCACTTCACAGAGCCAGTCTGAAGCCATCCCCTTCCTaGCCTCACTCCAGGTGTGTCGCAGGAAGCACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLHRASLKPSPS*PHSRCVAGSTA Trigger: TGCTGTGCTTCCTGCGACACACCTGGAGTGAGGGCAGGAAGGGGATGGCTTCAGACTGGCTCTGTGAAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR GCA 72 bp | CACTGGCTCCTATCTAGAGAATTTGGCTGTCCCACCTaGTCCAGGGCTCAGTGGGCAACGCTTGCAGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: HWLLSREFGCPT*SRAQWATLAAI Trigger: GATGGCTGCAAGCGTTGCCCACTGAGCCCTGGAGCAGGTGGGACAGCCAAATTCTCTAGATAGGAGCCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR GCA 72 bp | GCTGCCACACACAACCCGACTCTGCTGCCCGGCTGTTaGTTCATTAGTCACAGACTCATTCTCGGCCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: AATHNPTLLPGC*FISHRLILGPH Trigger: GTGTGGGCCGAGAATGAGTCTGTGACTAATGAAGCAACAGCCGGGCAGCAGAGTCGGGTTGTGTGTGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR GCA 72 bp | GACAACCTGAGAGAAGCAGGTGGACTGGGTACCTTCTaGTCTCCACTGGCCATTGGCAGGAGTGGTCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: DNLREAGGLGTF*SPLAIGRSGPT Trigger: AGTGGGACCACTCCTGCCAATGGCCAGTGGAGAGCAGAAGGTACCCAGTCCACCTGCTTCTCTCAGGTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR CCA 72 bp | AGCGGTGAGGGACAGCACCCTTCTGGTCAGTTGCACTaGACATCTGCATCAGCTAACTTCTGGGCACGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SGEGQHPSGQLH*TSASANFWARA Trigger: TGCTCGTGCCCAGAAGTTAGCTGATGCAGATGTCCAGTGCAACTGACCAGAAGGGTGCTGTCCCTCACCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR GCA 72 bp | GCTTGGGCACTCTCTTGGTTGCTTCATCGATCCAGTTaGCCTCGGCAGAGTGTTTCTCCTCCAGGGGATTAC | + |
|
Preference number: 3 (lower is better) Translates to: AWALSWLLHRSS*PRQSVSPPGDY Trigger: GTAATCCCCTGGAGGAGAAACACTCTGCCGAGGGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156138.8 |
||
| 3UTR CCA 72 bp | CCAGCCTGCACAGAGGAATGCTGGGACAGGAAACACTaGCTCCTATCTAGAGAATTTGGCTGTCCCACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PACTEECWDRKH*LLSREFGCPTC Trigger: GCAGGTGGGACAGCCAAATTCTCTAGATAGGAGCCAGTGTTTCCTGTCCCAGCATTCCTCTGTGCAGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR TCA 72 bp | AGCCTCCTCATGGTACTGGGAAGCAAGCTCAGGTCCTaGGCAACAGGTACTCTTACCTCTGAGCTGTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SLLMVLGSKLRS*ATGTLTSELSH Trigger: GTGAGACAGCTCAGAGGTAAGAGTACCTGTTGCTCAGGACCTGAGCTTGCTTCCCAGTACCATGAGGAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR TCA 72 bp | ACATTTAGGTCAGCCCCAGGAAGCATTCCAAGTAACTaGGCGGTGAGGGACAGCACCCTTCTGGTCAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: TFRSAPGSIPSN*AVRDSTLLVSC Trigger: GCAACTGACCAGAAGGGTGCTGTCCCTCACCGCTCAGTTACTTGGAATGCTTCCTGGGGCTGACCTAAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR GCA 72 bp | GGCAGGAAGCCTCAGGACATCTCATTTCTCACTGTGTaGATGCGCCGTGCCTGTGTACATGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GRKPQDISFLTV*MRRACVHVCVC Trigger: ACACACACACACATGTACACAGGCACGGCGCATGCACACAGTGAGAAATGAGATGTCCTGAGGCTTCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
||
| 3UTR TCA 72 bp | GCAGCTAACCTGCACACAGTGCACGGCCCACAAGAGTaGGTCATACAGCCTAAATGTAAACAGCGCCACACT | + |
|
Preference number: 3 (lower is better) Translates to: AANLHTVHGPQE*VIQPKCKQRHT Trigger: AGTGTGGCGCTGTTTACATTTAGGCTGTATGACTCACTCTTGTGGGCCGTGCACTGTGTGCAGGTTAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR CCA 72 bp | GAGTACCATCCAGCTTTTTCAGCTTGGGCACTCTCTTaGTTGCTTCATCGATCCAGTTGCCCTCGGCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: EYHPAFSAWALS*LLHRSSCPRQS Trigger: ACTCTGCCGAGGGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCTGAAAAAGCTGGATGGTACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156138.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAATGCTGGGACAGGAAACACTGGCTCCTATCTAGAGAATTTGGCTGTCCCCTCAGTGGGCAACGCTaGCAGCCATCTTTTGTTACC | + |
|
Preference number: 3 (lower is better) Translates to: EECWDRKHWLLSREFGCPLSGQR*QPSFVT Trigger: GGTAACAAAAGATGGCTGCAAGCGTTGCCCACTGAG...GGGACAGCCAAATTCTCTAGATAGGAGCCAGTGTTTCCTGTCCCAGCATTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCACCACGCTGCCTCTGAAGCAATGCGTGCTGCATTTGTGCTTCTGACTTGTTGGGCACTCTCTTGGTaGCTTCATCGATCCAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SHHAASEAMRAAFVLLTCWALSW*LHRSSC Trigger: GCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCA...ACAAGTCAGAAGCACAAATGCAGCACGCATTGCTTCAGAGGCAGCGTGGTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156138.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAGGCCAGAAAAGGACATGAGAGTCCCTGGAGGTCCAGAAAAGGACATCAGTTCCCAAGGCTGGACTaGACTACAATTGGTGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: WEARKGHESPWRSRKGHQFPRLD*TTIGAT Trigger: AGTAGCACCAATTGTAGTCAAGTCCAGCCTTGGGAA...CTGATGTCCTTTTCTGGACCTCCAGGGACTCTCATGTCCTTTTCTGGCCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR GCA 72 bp | TCAGGACATCTCATTTCTCACTGTGTGCATGCGCCGTaGCTGTGTACATGTGTGTGTGTGTGTGAGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SGHLISHCVHAP*LCTCVCVCERE Trigger: CTCTCTCTCACACACACACACACATGTACACAGGCACGGCGCATGCACACAGTGAGAAATGAGATGTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
||
| 3UTR CCA 72 bp | GCAGAGACAGGTGGATCTCTGTGTTTGATGCTAGCCTaGTCTACATACAGAGTAAGTCCCAAGACTGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AETGGSLCLMLA*STYRVSPKTAW Trigger: CCAGGCAGTCTTGGGACTTACTCTGTATGTAGACCAGGCTAGCATCAAACACAGAGATCCACCTGTCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCAAGAAGCCTCCACGGCAGCCATTCTTCCTTTTCTGAGCAGTGTTTCCAACTTCCCAAGGCTGGACTaGACTACAATTGGTGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: SQEASTAAILPFLSSVSNFPRLD*TTIGAT Trigger: AGTAGCACCAATTGTAGTCAAGTCCAGCCTTGGGAA...GTTGGAAACACTGCTCAGAAAAGGAAGAATGGCTGCCGTGGAGGCTTCTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAGGCCAGAAAAGGACATGAGAGTCCCTGGAGGTCCAGAAAAGGACATCAGCAACCTACACTCCAGTaGACAGTGCACACATTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: WEARKGHESPWRSRKGHQQPTLQ*TVHTFL Trigger: CAAAAATGTGTGCACTGTCAACTGGAGTGTAGGTTG...CTGATGTCCTTTTCTGGACCTCCAGGGACTCTCATGTCCTTTTCTGGCCTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR TCA 72 bp | AGTGATGGACACAGACATGGAACTCGGAAGGCTGAGTaGTCACTGATGCAGCTGTTCACACTGGGTAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SDGHRHGTRKAE*SLMQLFTLGKE Trigger: TTCCTTACCCAGTGTGAACAGCTGCATCAGTGATCACTCAGCCTTCCGAGTTCCATGTCTGTGTCCATCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR TCA 72 bp | GTTTTCTCCCCTTGCCGTTACTGTTTACCGTCTCAGTaGACTCGGAACAGCTACCTCAGTCAGAGACAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VFSPCRYCLPSQ*TRNSYLSQRQE Trigger: TTCTTGTCTCTGACTGAGGTAGCTGTTCCGAGTTCACTGAGACGGTAAACAGTAACGGCAAGGGGAGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR GCA 72 bp | GCTAGCCTGGTCTACATACAGAGTAAGTCCCAAGACTaGCTGGGAAACCCTGTCTTGAACAACCAAAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: ASLVYIQSKSQD*LGNPVLNNQNQ Trigger: TTGGTTTTGGTTGTTCAAGACAGGGTTTCCCAGGCAGTCTTGGGACTTACTCTGTATGTAGACCAGGCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAGGCCAGAAAAGGACATGAGAGTCCCTGGAGGTCCAGAAAAGGACATCAGGTCAATAATTCTATCTaGACCCACTGGAGACTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: WEARKGHESPWRSRKGHQVNNSI*THWRLH Trigger: ATGAAGTCTCCAGTGGGTCAAGATAGAATTATTGAC...CTGATGTCCTTTTCTGGACCTCCAGGGACTCTCATGTCCTTTTCTGGCCTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGAATTTGGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTGGACTTTAGGCACAGGTaGGCAGCGGTTCCTGACTAC | + |
|
Preference number: 3 (lower is better) Translates to: YRIWKQTHICKSLHRASLDFRHR*AAVPDY Trigger: GTAGTCAGGAACCGCTGCCAACCTGTGCCTAAAGTC...CAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCAAGAAAAACCCAGGTAAAAGACTCCCTGCTTTCTCTGTCACCAACTCTGGAAGTCTCACCACTGTaGCTCAGAAGAGAAATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TSRKTQVKDSLLSLSPTLEVSPL*LRREMP Trigger: TGGCATTTCTCTTCTGAGCAACAGTGGTGAGACTTC...CAGAGTTGGTGACAGAGAAAGCAGGGAGTCTTTTACCTGGGTTTTTCTTGAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR TCA 72 bp | CACTCTGTAGACCAGGCTGGCCTTCCACTTTCAAATTaGATGCATTTTGGCTTTAATTCCAGGAACAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: HSVDQAGLPLSN*MHFGFNSRNRA Trigger: GGCTCTGTTCCTGGAATTAAAGCCAAAATGCATTCAATTTGAAAGTGGAAGGCCAGCCTGGTCTACAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR TCA 72 bp | GACTCCCTGCTTTCTCTGTCACCAACTCTGAGCCAATaGCAGATTTATTTCCAATGCTCCCTCGTTTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DSLLSLSPTLSQ*QIYFQCSLVFR Trigger: TCTGAAAACGAGGGAGCATTGGAAATAAATCTGTCATTGGCTCAGAGTTGGTGACAGAGAAAGCAGGGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR TCA 72 bp | GAGCAACTCAATACAACACAGTCTAGACTTAATGACTaGCACACCCTGCAAAAGAGTCTGTGCAGGGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: EQLNTTQSRLND*HTLQKSLCRVI Trigger: TATCACCCTGCACAGACTCTTTTGCAGGGTGTGTCAGTCATTAAGTCTAGACTGTGTTGTATTGAGTTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR CCA 72 bp | TTTGTGCTTCTGACTTGTAAGGGCCTGAACCTTCTATaGATGGCAAAGTCGTCTATCTTTAAAATGCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FVLLTCKGLNLL*MAKSSIFKMPG Trigger: CCCAGGCATTTTAAAGATAGACGACTTTGCCATCCATAGAAGGTTCAGGCCCTTACAAGTCAGAAGCACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR CCA 72 bp | ACTCCACAATCAGTCAATAATTCTATCTTGACCCACTaGAGACTTCATCTGGTGCTGATGCCATTTTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: TPQSVNNSILTH*RLHLVLMPFYR Trigger: CCTGTAAAATGGCATCAGCACCAGATGAAGTCTCCAGTGGGTCAAGATAGAATTATTGACTGATTGTGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAGAATTTGGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTGCAACCTACACTCCAGTaGACAGTGCACACATTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: YRIWKQTHICKSLHRASLQPTLQ*TVHTFL Trigger: CAAAAATGTGTGCACTGTCAACTGGAGTGTAGGTTG...CAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGAACTCGGAACAGCTACCTCAGTCAGAGACAAGAACTCCTCAACCATTTTTCCACAACCAGACATTCTaGTATGGATTTAGAGTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VNSEQLPQSETRTPQPFFHNQTF*YGFRVD Trigger: ATCAACTCTAAATCCATACAAGAATGTCTGGTTGTG...GAAAAATGGTTGAGGAGTTCTTGTCTCTGACTGAGGTAGCTGTTCCGAGTTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR TCA 72 bp | AGTCAGAGACAAGAACTCCTCAACCATTTTTCAAAGTaGATGATTACATGCAAACTGTCTAGGCCGGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: SQRQELLNHFSK*MITCKLSRPAN Trigger: GTTAGCCGGCCTAGACAGTTTGCATGTAATCATTCACTTTGAAAAATGGTTGAGGAGTTCTTGTCTCTGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAATTTGGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTGAAGTGTATGGATTTAGAGTaGATTGTCAAAGCAGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RIWKQTHICKSLHRASLKCMDLE*IVKAVV Trigger: GACCACTGCTTTGACAATCAACTCTAAATCCATACA...CTTCAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR GCA 72 bp | TGTCAGATCATAATTGGTTGTCTGGGTCCTCTAATCTaGCCAATATGGGAAATCAATGAGAATCTGATTAGG | + |
|
Preference number: 3 (lower is better) Translates to: CQIIIGCLGPLI*PIWEINENLIR Trigger: CCTAATCAGATTCTCATTGATTTCCCATATTGGGCAGATTAGAGGACCCAGACAACCAATTATGATCTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR CCA 72 bp | CTCTCTTCCTTCTTGTTAAAATTGTCAGATCATAATTaGTTGTCTGGGTCCTCTAATCTGCCCAATATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSSFLLKLSDHN*LSGSSNLPNMG Trigger: TCCCATATTGGGCAGATTAGAGGACCCAGACAACCAATTATGATCTGACAATTTTAACAAGAAGGAAGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTTTCAAAATCTCAGTGGTCGATACTTAGGACTATTGACTACTGCTTTAAACGATACTTAGGACTATaGACTACTGCTTTAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: RFSKSQWSILRTIDYCFKRYLGL*TTALNT Trigger: TGTGTTTAAAGCAGTAGTCAATAGTCCTAAGTATCG...TTTAAAGCAGTAGTCAATAGTCCTAAGTATCGACCACTGAGATTTTGAAAACCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR CAA 72 bp | CAGGTGGACTGGGTACCTTCTGCTCTCCACTGGCCATaGGCAGGAGTGGTCCCACTTGGCAACAGCGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: QVDWVPSALHWP*AGVVPLGNSVI Trigger: TATGACGCTGTTGCCAAGTGGGACCACTCCTGCCAATGGCCAGTGGAGAGCAGAAGGTACCCAGTCCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR CAA 72 bp | GCTGGGACAGGAAACACTGGCTCCTATCTAGAGAATTaGGCTGTCCCACCTGCTCCAGGGCTCAGTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGTGNTGSYLEN*AVPPAPGLSGQ Trigger: TTGCCCACTGAGCCCTGGAGCAGGTGGGACAGCCAAATTCTCTAGATAGGAGCCAGTGTTTCCTGTCCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCCCCTGGAGGTCCAGAGGGCTGTGAGCCTCCTCATGGTACTGGGAAGCAATGGACAGGGCTTCTTTaGTCGTTGTTGCTTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAPGGPEGCEPPHGTGKQWTGLL*SLLLLP Trigger: TGGCAAAAGCAACAACGATCAAAGAAGCCCTGTCCA...TTGCTTCCCAGTACCATGAGGAGGCTCACAGCCCTCTGGACCTCCAGGGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| CDS-3UTR TCA 90 bp | CTCGGCAGAGTGTTTCTCCTCCAGGGGATTACCGACGAACACCAGGTCCTCCAGGCATCAGATGGCTTCTaGCCAGTCTTTTCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGRVFLLQGITDEHQVLQASDGF*PVFSSH Trigger: ATGGGAAGAAAAGACTGGTCAGAAGCCATCTGATGC...CTGGAGGACCTGGTGTTCGTCGGTAATCCCCTGGAGGAGAAACACTCTGCCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156138.8 |
||
| 3UTR CAA 72 bp | AGCTTGGGCACTCTCTTGGTTGCTTCATCGATCCAGTaGCCCTCGGCAGAGTGTTTCTCCTCCAGGGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: SLGTLLVASSIQ*PSAECFSSRGL Trigger: TAATCCCCTGGAGGAGAAACACTCTGCCGAGGGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156138.8 |
||
| 3UTR CAA 72 bp | GGAGTACCATCCAGCTTTTTCAGCTTGGGCACTCTCTaGGTTGCTTCATCGATCCAGTTGCCCTCGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVPSSFFSLGTL*VASSIQLPSAE Trigger: CTCTGCCGAGGGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCTGAAAAAGCTGGATGGTACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156138.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCCCCTGGAGGTCCAGAGGGCTGTGAGCCTCCTCATGGTACTGGGAAGCAAGCTTCCCTCATGATTTaGCTTGAGGAGGAATTATTC | + |
|
Preference number: 4 (lower is better) Translates to: RAPGGPEGCEPPHGTGKQASLMI*LEEELF Trigger: GAATAATTCCTCCTCAAGTCAAATCATGAGGGAAGC...TTGCTTCCCAGTACCATGAGGAGGCTCACAGCCCTCTGGACCTCCAGGGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156138.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGGGAACAATAGTACACCTGTTAGAGTCCTTGAGGACCACTGGCCTATAGGGCACTCTCTTGGTTaGTTCATCGATCCAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKGNNSTPVRVLEDHWPIGHSLG*FIDPVA Trigger: GGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCC...TATAGGCCAGTGGTCCTCAAGGACTCTAACAGGTGTACTATTGTTCCCCTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
||
| CDS-3UTR CCA 90 bp | TCTCACCACGCTGCCTCTGAAGCAATGCGTGCTGCATTTGTGCTTCTGACTTGTCGTCCATCTTCTCTATaGGGGGAATCTGGGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: SHHAASEAMRAAFVLLTCRPSSL*GESGHT Trigger: TGTATGCCCAGATTCCCCCCATAGAGAAGATGGACG...ACAAGTCAGAAGCACAAATGCAGCACGCATTGCTTCAGAGGCAGCGTGGTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR CAA 72 bp | CTGAGACTGACTGTGGGAAGGACAGGTTTTCTCCCCTaGCCGTTACTGTTTACCGTCTCAGTGAACTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRLTVGRTGFLP*PLLFTVSVNSE Trigger: TTCCGAGTTCACTGAGACGGTAAACAGTAACGGCAAGGGGAGAAAACCTGTCCTTCCCACAGTCAGTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| 3UTR CAA 72 bp | AGCACTAGGGAGGCAGAGACAGGTGGATCTCTGTGTTaGATGCTAGCCTGGTCTACATACAGAGTAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: STREAETGGSLC*MLAWSTYRVSP Trigger: GGGACTTACTCTGTATGTAGACCAGGCTAGCATCAAACACAGAGATCCACCTGTCTCTGCCTCCCTAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGGAACAATAGTACACCTGTTAGAGTCCTTGAGGACCACTGGCCTATAGCTTGGGCACTCTCTTaGTTGCTTCATCGATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKGNNSTPVRVLEDHWPIAWALS*LLHRSS Trigger: ACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGC...TATAGGCCAGTGGTCCTCAAGGACTCTAACAGGTGTACTATTGTTCCCCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
||
| CDS-3UTR CCA 90 bp | CAAACAAACAAAATGCACATTCCCATGACACGGGTGTGTCACACAGCTGTGGCACCAGCTTTTTCAGCTTaGGCACTCTCTTGGTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTNKMHIPMTRVCHTAVAPAFSA*ALSWLL Trigger: AAGCAACCAAGAGAGTGCCCAAGCTGAAAAAGCTGG...TGCCACAGCTGTGTGACACACCCGTGTCATGGGAATGTGCATTTTGTTTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
||
| CDS-3UTR GCA 90 bp | GAAATAGGGGAGGGGTGTTTCCCAACTACAGAATTTGGAAACAAACACACATCTGGGCACTCTCTTGGTTaGTTCATCGATCCAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EIGEGCFPTTEFGNKHTSGHSLG*FIDPVA Trigger: GGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCC...AGATGTGTGTTTGTTTCCAAATTCTGTAGTTGGGAAACACCCCTCCCCTATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| CDS-3UTR TCA 90 bp | TCGGAACAGCTACCTCAGTCAGAGACAAGAACTCCTCAACCATTTTTCAAAGTGTCTGGGCATACAGCTTaGTTTCTTTGGCATCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SEQLPQSETRTPQPFFKVSGHTA*FLWHQM Trigger: CATCTGATGCCAAAGAAATCAAGCTGTATGCCCAGA...CACTTTGAAAAATGGTTGAGGAGTTCTTGTCTCTGACTGAGGTAGCTGTTCCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| CDS-3UTR CCA 90 bp | TACAGAATTTGGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTGGCTTGGGCACTCTCTTaGTTGCTTCATCGATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YRIWKQTHICKSLHRASLAWALS*LLHRSS Trigger: ACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGC...CAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| CDS-3UTR CCA 90 bp | AGAATTTGGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTGAAGCGTCCATCTTCTCTATaGGGGGAATCTGGGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: RIWKQTHICKSLHRASLKRPSSL*GESGHT Trigger: TGTATGCCCAGATTCCCCCCATAGAGAAGATGGACG...CTTCAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGTGAAGGTTTTCAAAATCTCAGTGGTCGATACTTAGGACTATTGACTACTTGGACAGGGCTTCTTTaGTCGTTGTTGCTTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGEGFQNLSGRYLGLLTTWTGLL*SLLLLP Trigger: TGGCAAAAGCAACAACGATCAAAGAAGCCCTGTCCA...AGTAGTCAATAGTCCTAAGTATCGACCACTGAGATTTTGAAAACCTTCACCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAGCCGCATCAAAGTCATTCCAATATTTGTGATGAGGAGCCGAAAATGTTTGCATCAGATGGCTTCTaGCCAGTCTTTTCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TEPHQSHSNICDEEPKMFASDGF*PVFSSH Trigger: ATGGGAAGAAAAGACTGGTCAGAAGCCATCTGATGC...AAACATTTTCGGCTCCTCATCACAAATATTGGAATGACTTTGATGCGGCTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| CDS-3UTR CCA 90 bp | TTCTATCTTGACCCACTGGAGACTTCATCTGGTGCTGATGCCATTTTACAGGTTTTCTTTGGCATCAGATaGCTTCTGACCAGTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FYLDPLETSSGADAILQVFFGIR*LLTSLF Trigger: GAAAAGACTGGTCAGAAGCCATCTGATGCCAAAGAA...AACCTGTAAAATGGCATCAGCACCAGATGAAGTCTCCAGTGGGTCAAGATAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| 3UTR CAA 72 bp | GAGGTTAAGACACCTATAGTGACAATCTACAACATATaGCCATTTGCCCAAAACACCTCACTGTTTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVKTPIVTIYNI*PFAQNTSLFPP Trigger: TGGAGGAAACAGTGAGGTGTTTTGGGCAAATGGCAATATGTTGTAGATTGTCACTATAGGTGTCTTAACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
||
| CDS-3UTR CCA 90 bp | AACCAAACCAAAGTTTCTATTCTAAATAGAAAAGCTATTTACACCCTCCCAGAGCCAGCTTTTTCAGCTTaGGCACTCTCTTGGTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NQTKVSILNRKAIYTLPEPAFSA*ALSWLL Trigger: AAGCAACCAAGAGAGTGCCCAAGCTGAAAAAGCTGG...CTCTGGGAGGGTGTAAATAGCTTTTCTATTTAGAATAGAAACTTTGGTTTGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| CDS CCA 90 bp | CACCGTCACACTCACCATCCAGCTTTTTCAGCTTGGGCACTCTCTTaGTTGCTTCATCGATCCAGTTGCCCTCGGCAGAGTGTTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HRHTHHPAFSAWALS*LLHRSSCPRQSVSP Trigger: AGGAGAAACACTCTGCCGAGGGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCTGAAAAAGCTGGATGGTGAGTGTGACGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
||
| CDS-3UTR CAA 90 bp | TATCTAGAGAATTTGGCTGTCCCACCTGCTCCAGGGCTCAGTGGGCAACGCTTGCTGGACAGGGCTTCTTaGATCGTTGTTGCTTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YLENLAVPPAPGLSGQRLLDRAS*IVVAFA Trigger: GGCAAAAGCAACAACGATCAAAGAAGCCCTGTCCAG...CAAGCGTTGCCCACTGAGCCCTGGAGCAGGTGGGACAGCCAAATTCTCTAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
||
| CDS-3UTR CAA 90 bp | ACACCTGTTAGAGTCCTTGAGGACCACTGGCCTATAAACATTTCCTCATGGCTTAGCTTGGGCACTCTCTaGGTTGCTTCATCGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TPVRVLEDHWPINISSWLSLGTL*VASSIQ Trigger: CTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCT...AAGCCATGAGGAAATGTTTATAGGCCAGTGGTCCTCAAGGACTCTAACAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTTAGAGTCCTTGAGGACCACTGGCCTATAAACATTTCCTCATGGCTTATTTGGGCACTCTCTTGGTaGCTTCATCGATCCAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PVRVLEDHWPINISSWLIWALSW*LHRSSC Trigger: GCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCA...AATAAGCCATGAGGAAATGTTTATAGGCCAGTGGTCCTCAAGGACTCTAACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
||
| CDS TCA 90 bp | GGAATCTGGGCATACAGCTTGATTTCTTTGGCATCAGATGGCTTCTaGCCAGTCTTTTCTTCCCATCTGGACAGGGCTTCTTTGATCGTT | + |
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Preference number: 5 (lower is better) Translates to: GIWAYSLISLASDGF*PVFSSHLDRASLIV Trigger: AACGATCAAAGAAGCCCTGTCCAGATGGGAAGAAAAGACTGGTCAGAAGCCATCTGATGCCAAAGAAATCAAGCTGTATGCCCAGATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123491.8 ENSMUST00000136159.2 ENSMUST00000156138.8 |
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| CDS-3UTR CAA 90 bp | TACAGAATTTGGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTGTGGGCACTCTCTTGGTaGCTTCATCGATCCAGTTGC | + |
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Preference number: 5 (lower is better) Translates to: YRIWKQTHICKSLHRASLWALSW*LHRSSC Trigger: GCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCA...CAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| CDS-3UTR CAA 90 bp | TACAGAATTTGGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTGAGCTTGGGCACTCTCTaGGTTGCTTCATCGATCCAG | + |
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Preference number: 5 (lower is better) Translates to: YRIWKQTHICKSLHRASLSLGTL*VASSIQ Trigger: CTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCT...CAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123491.8 |
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| CDS-3UTR CAA 90 bp | GAAATAGGGGAGGGGTGTTTCCCAACTACAGAATTTGGAAACAAACACACATCTATCTGGGCATACAGCTaGATTTCTTTGGCATCAGAT | + |
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Preference number: 5 (lower is better) Translates to: EIGEGCFPTTEFGNKHTSIWAYS*ISLASD Trigger: ATCTGATGCCAAAGAAATCAAGCTGTATGCCCAGAT...AGATGTGTGTTTGTTTCCAAATTCTGTAGTTGGGAAACACCCCTCCCCTATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| CDS-3UTR CAA 90 bp | AGAATTTGGAAACAAACACACATCTGTAAGTCACTTCACAGAGCCAGTCTGAAGATCTGGGCATACAGCTaGATTTCTTTGGCATCAGAT | + |
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Preference number: 5 (lower is better) Translates to: RIWKQTHICKSLHRASLKIWAYS*ISLASD Trigger: ATCTGATGCCAAAGAAATCAAGCTGTATGCCCAGAT...CTTCAGACTGGCTCTGTGAAGTGACTTACAGATGTGTGTTTGTTTCCAAATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123491.8 ENSMUST00000156138.8 |
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| CDS CAA 90 bp | CCACCGTCACACTCACCATCCAGCTTTTTCAGCTTGGGCACTCTCTaGGTTGCTTCATCGATCCAGTTGCCCTCGGCAGAGTGTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PPSHSPSSFFSLGTL*VASSIQLPSAECFS Trigger: GGAGAAACACTCTGCCGAGGGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCTGAAAAAGCTGGATGGTGAGTGTGACGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
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| CDS CCA 72 bp | CCCCACCGTCACACTCACCATCCAGCTTTTTCAGCTTaGGCACTCTCTTGGTTGCTTCATCGATCCAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: PHRHTHHPAFSA*ALSWLLHRSSC Trigger: GCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCTGAAAAAGCTGGATGGTGAGTGTGACGGTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
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| CDS CAA 72 bp | CACTCACCATCCAGCTTTTTCAGCTTGGGCACTCTCTaGGTTGCTTCATCGATCCAGTTGCCCTCGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: HSPSSFFSLGTL*VASSIQLPSAE Trigger: CTCTGCCGAGGGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCTGAAAAAGCTGGATGGTGAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
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| CDS CAA 90 bp | CGTCACACTCACCATCCAGCTTTTTCAGCTTGGGCACTCTCTTGGTaGCTTCATCGATCCAGTTGCCCTCGGCAGAGTGTTTCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RHTHHPAFSAWALSW*LHRSSCPRQSVSPP Trigger: TGGAGGAGAAACACTCTGCCGAGGGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCTGAAAAAGCTGGATGGTGAGTGTGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
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| CDS CCA 72 bp | ACTCACCATCCAGCTTTTTCAGCTTGGGCACTCTCTTaGTTGCTTCATCGATCCAGTTGCCCTCGGCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: THHPAFSAWALS*LLHRSSCPRQS Trigger: ACTCTGCCGAGGGCAACTGGATCGATGAAGCAACCAAGAGAGTGCCCAAGCTGAAAAAGCTGGATGGTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140812.2 |
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| CDS TCA 72 bp | GCATACAGCTTGATTTCTTTGGCATCAGATGGCTTCTaGCCAGTCTTTTCTTCCCATCTGGACAGGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: AYSLISLASDGF*PVFSSHLDRAS Trigger: AGAAGCCCTGTCCAGATGGGAAGAAAAGACTGGTCAGAAGCCATCTGATGCCAAAGAAATCAAGCTGTATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123491.8 ENSMUST00000136159.2 ENSMUST00000156138.8 |
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