Pregenerated sensors for DNAJC8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054405Ensembl transcript IDs: ENSMUST00000094657.10, ENSMUST00000138334.8, ENSMUST00000150207.8, ENSMUST00000156385.2
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAAGGCGGCATGGGTCCGAAGCTCCTTCAATCCTGGTGGATCCGTaGGGAAAGGACGGGGATGGTGAAACCAAGCCCCTCCTCTCAATG | + |
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Preference number: 1 (lower is better) Translates to: RRRHGSEAPSILVDP*GKDGDGETKPLLSM Trigger: CATTGAGAGGAGGGGCTTGGTTTCACCATCCCCGTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACCCATGCCGCCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094657.10 ENSMUST00000150207.8 |
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| 3UTR CCA 90 bp | AGCAAGGGCCTCAAGGATGGCTTCCCAAGGTGGCCCAGGCTGATCTaGAGTCGGGGCAACACCACTGTAAGCAAGACATTTAATTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: SKGLKDGFPRWPRLI*SRGNTTVSKTFNWK Trigger: TTTCCAATTAAATGTCTTGCTTACAGTGGTGTTGCCCCGACTCCAGATCAGCCTGGGCCACCTTGGGAAGCCATCCTTGAGGCCCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094657.10 |
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| 3UTR TCA 90 bp | GCAAGGACACAACGGGACTGGCTGGAAGATGAATTCTTTGGAAAGTaGACAGGTTTAAGTGGCTGGGAGCCTCGTGCCAAACACCACAGG | + |
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Preference number: 1 (lower is better) Translates to: ARTQRDWLEDEFFGK*TGLSGWEPRAKHHR Trigger: CCTGTGGTGTTTGGCACGAGGCTCCCAGCCACTTAAACCTGTTCACTTTCCAAAGAATTCATCTTCCAGCCAGTCCCGTTGTGTCCTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094657.10 |
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| 3UTR CAA 90 bp | GCTTCGATCTCCTCTTCTCTCTGTCGCTTCCTCTCATGCATTTCTTaGGCTTCTCTCTCTTTCCTTTTAATCTCCAGCTCAGCAAACAGC | + |
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Preference number: 2 (lower is better) Translates to: ASISSSLCRFLSCIS*ASLSFLLISSSANS Trigger: GCTGTTTGCTGAGCTGGAGATTAAAAGGAAAGAGAGAGAAGCCAAAGAAATGCATGAGAGGAAGCGACAGAGAGAAGAGGAGATCGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138334.8 |
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| 3UTR CCA 72 bp | CATGGGTCCGAAGCTCCTTCAATCCTGGTGGATCCGTaGGGAAAGGACGGGGATGGTGAAACCAAGCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: HGSEAPSILVDP*GKDGDGETKPL Trigger: GAGGGGCTTGGTTTCACCATCCCCGTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094657.10 ENSMUST00000150207.8 |
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| 3UTR CCA 72 bp | GAAGGCGGCATGGGTCCGAAGCTCCTTCAATCCTGGTaGATCCGTGGGGAAAGGACGGGGATGGTGAAACCA | + |
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Preference number: 3 (lower is better) Translates to: EGGMGPKLLQSW*IRGERTGMVKP Trigger: TGGTTTCACCATCCCCGTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACCCATGCCGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094657.10 ENSMUST00000150207.8 |
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| 3UTR CCA 72 bp | TATTGGAGCAAGGGCCTCAAGGATGGCTTCCCAAGGTaGCCCAGGCTGATCTGGAGTCGGGGCAACACCACT | + |
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Preference number: 3 (lower is better) Translates to: YWSKGLKDGFPR*PRLIWSRGNTT Trigger: AGTGGTGTTGCCCCGACTCCAGATCAGCCTGGGCCACCTTGGGAAGCCATCCTTGAGGCCCTTGCTCCAATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094657.10 |
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| 3UTR CCA 72 bp | AAAGAAGGCGGCATGGGTCCGAAGCTCCTTCAATCCTaGTGGATCCGTGGGGAAAGGACGGGGATGGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: KEGGMGPKLLQS*WIRGERTGMVK Trigger: TTTCACCATCCCCGTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACCCATGCCGCCTTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094657.10 ENSMUST00000150207.8 |
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| 3UTR CCA 72 bp | CTCAAGGATGGCTTCCCAAGGTGGCCCAGGCTGATCTaGAGTCGGGGCAACACCACTGTAAGCAAGACATTT | + |
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Preference number: 3 (lower is better) Translates to: LKDGFPRWPRLI*SRGNTTVSKTF Trigger: AAATGTCTTGCTTACAGTGGTGTTGCCCCGACTCCAGATCAGCCTGGGCCACCTTGGGAAGCCATCCTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094657.10 |
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| 3UTR CCA 72 bp | AGTGACTGCCGTGTGAATCCACAATACCTCTCCTATTaGAGCAAGGGCCTCAAGGATGGCTTCCCAAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: SDCRVNPQYLSY*SKGLKDGFPRW Trigger: CCACCTTGGGAAGCCATCCTTGAGGCCCTTGCTCCAATAGGAGAGGTATTGTGGATTCACACGGCAGTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094657.10 |
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| 3UTR CCA 72 bp | AACATTAAGTTAGAGGCGTGGGAAAAGAAGGCGGCATaGGTCCGAAGCTCCTTCAATCCTGGTGGATCCGTG | + |
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Preference number: 3 (lower is better) Translates to: NIKLEAWEKKAA*VRSSFNPGGSV Trigger: CACGGATCCACCAGGATTGAAGGAGCTTCGGACCCATGCCGCCTTCTTTTCCCACGCCTCTAACTTAATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094657.10 ENSMUST00000150207.8 |
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| CDS-3UTR CCA 90 bp | AGGCGGCATGGGTCCGAAGCTCCTTCAATCCTGGTGGATCCGTGGGGAAAGGACGCAGCGGGGAGGCTCTaGTCCTGCTGCTCACTCCCG | + |
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Preference number: 4 (lower is better) Translates to: RRHGSEAPSILVDPWGKDAAGRL*SCCSLP Trigger: CGGGAGTGAGCAGCAGGACCAGAGCCTCCCCGCTGC...GTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACCCATGCCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150207.8 |
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| CDS-3UTR TCA 90 bp | GGCATGGGTCCGAAGCTCCTTCAATCCTGGTGGATCCGTGGGGAAAGGACGGGGCCCGCTGCTCCATCTTaGCTTTCGGTGGCCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GMGPKLLQSWWIRGERTGPAAPS*LSVAAG Trigger: TCCTGCGGCCACCGAAAGTCAAGATGGAGCAGCGGG...CCCCGTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACCCATGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094657.10 ENSMUST00000150207.8 |
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| CDS-3UTR GCA 90 bp | ATGGGTCCGAAGCTCCTTCAATCCTGGTGGATCCGTGGGGAAAGGACGGGGATGGGGAGGCTCTGGTCCTaGTGCTCACTCCCGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: MGPKLLQSWWIRGERTGMGRLWS*CSLPLL Trigger: GAGCAGCGGGAGTGAGCAGCAGGACCAGAGCCTCCC...CATCCCCGTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150207.8 |
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| CDS-3UTR TCA 90 bp | AAGGCGGCATGGGTCCGAAGCTCCTTCAATCCTGGTGGATCCGTGGGGAAAGGACCCGCTGCTCCATCTTaGCTTTCGGTGGCCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: KAAWVRSSFNPGGSVGKGPAAPS*LSVAAG Trigger: TCCTGCGGCCACCGAAAGTCAAGATGGAGCAGCGGG...TCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACCCATGCCGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094657.10 ENSMUST00000150207.8 |
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| CDS-3UTR CCA 90 bp | GCAGGAGGAGCAGCGGGGAGGCTCTGGTCCTGCTGCTCACTCCCGCTGCTCCATACTCTCTTTCTCGCTTaGCTTTTTCCTGGGCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: AGGAAGRLWSCCSLPLLHTLFLA*LFPGLR Trigger: TCGAAGCCCAGGAAAAAGCCAAGCGAGAAAGAGAGT...ATGGAGCAGCGGGAGTGAGCAGCAGGACCAGAGCCTCCCCGCTGCTCCTCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156385.2 |
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| CDS-3UTR CCA 90 bp | CGGCATGGGTCCGAAGCTCCTTCAATCCTGGTGGATCCGTGGGGAAAGGACGGGATCGCTACTCTCTGGTaGGGTGGAGGTGGAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: RHGSEAPSILVDPWGKDGIATLW*GGGGER Trigger: TCTCTCTCCACCTCCACCCCACCAGAGAGTAGCGAT...CCCGTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACCCATGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150207.8 |
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| CDS-3UTR CCA 90 bp | CGGCATGGGTCCGAAGCTCCTTCAATCCTGGTGGATCCGTGGGGAAAGGACGGGTACTCTCTGGTGGGGTaGAGGTGGAGAGAGAATGAG | + |
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Preference number: 4 (lower is better) Translates to: RHGSEAPSILVDPWGKDGYSLVG*RWRENE Trigger: CTCATTCTCTCTCCACCTCCACCCCACCAGAGAGTA...CCCGTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACCCATGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150207.8 |
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| CDS-3UTR CCA 90 bp | GGTCCGAAGCTCCTTCAATCCTGGTGGATCCGTGGGGAAAGGACGGGGATGGTGCAGGATGCACCAGGATaGACAACTGACGAAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: GPKLLQSWWIRGERTGMVQDAPG*TTDETS Trigger: AGAGGTTTCGTCAGTTGTCCATCCTGGTGCATCCTG...CACCATCCCCGTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094657.10 ENSMUST00000150207.8 |
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| CDS-3UTR CCA 90 bp | GGCATGGGTCCGAAGCTCCTTCAATCCTGGTGGATCCGTGGGGAAAGGACGGGGCAGCAAACAGCTTCATaGTCTGTTTGTAGACTGCCT | + |
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Preference number: 4 (lower is better) Translates to: GMGPKLLQSWWIRGERTGQQTAS*SVCRLP Trigger: AGGCAGTCTACAAACAGACCATGAAGCTGTTTGCTG...CCCCGTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACCCATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094657.10 ENSMUST00000150207.8 |
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| CDS-3UTR CCA 90 bp | GGTCCGAAGCTCCTTCAATCCTGGTGGATCCGTGGGGAAAGGACGGGGATGGTGACTCTCTTTCTCGCTTaGCTTTTTCCTGGGCTTCGA | + |
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Preference number: 4 (lower is better) Translates to: GPKLLQSWWIRGERTGMVTLFLA*LFPGLR Trigger: TCGAAGCCCAGGAAAAAGCCAAGCGAGAAAGAGAGT...CACCATCCCCGTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094657.10 |
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| CDS-3UTR GCA 90 bp | AAGGCGGCATGGGTCCGAAGCTCCTTCAATCCTGGTGGATCCGTGGGGAAAGGAGGTCTGTTTGTAGACTaGCTGTTTGAACAGTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: KAAWVRSSFNPGGSVGKGGLFVD*LFEQFG Trigger: CCCGAACTGTTCAAACAGGCAGTCTACAAACAGACC...TCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACCCATGCCGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094657.10 ENSMUST00000150207.8 |
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| CDS-3UTR CCA 90 bp | TCCGAAGCTCCTTCAATCCTGGTGGATCCGTGGGGAAAGGACGGGGATGGTGAACGCTTGGCTTTTTCCTaGGCTTCGATCTCCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SEAPSILVDPWGKDGDGERLAFS*ASISSS Trigger: AGAAGAGGAGATCGAAGCCCAGGAAAAAGCCAAGCG...TTCACCATCCCCGTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094657.10 |
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| CDS-3UTR CCA 90 bp | ATGGGTCCGAAGCTCCTTCAATCCTGGTGGATCCGTGGGGAAAGGACGGGGATGCAGCAAACAGCTTCATaGTCTGTTTGTAGACTGCCT | + |
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Preference number: 4 (lower is better) Translates to: MGPKLLQSWWIRGERTGMQQTAS*SVCRLP Trigger: AGGCAGTCTACAAACAGACCATGAAGCTGTTTGCTG...CATCCCCGTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGGACCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094657.10 ENSMUST00000150207.8 |
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| CDS-3UTR CCA 90 bp | TTCGCCAACTGTCCACTCGACCATCCCGACTTTCCTATAATCCCAGCACGGGAGCGCTTGGCTTTTTCCTaGGCTTCGATCTCCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FANCPLDHPDFPIIPARERLAFS*ASISSS Trigger: AGAAGAGGAGATCGAAGCCCAGGAAAAAGCCAAGCG...CTCCCGTGCTGGGATTATAGGAAAGTCGGGATGGTCGAGTGGACAGTTGGCGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156385.2 |
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| CDS-3UTR GCA 90 bp | TTCGCCAACTGTCCACTCGACCATCCCGACTTTCCTATAATCCCAGCACGGGAGGGTCTGTTTGTAGACTaGCTGTTTGAACAGTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: FANCPLDHPDFPIIPAREGLFVD*LFEQFG Trigger: CCCGAACTGTTCAAACAGGCAGTCTACAAACAGACC...CTCCCGTGCTGGGATTATAGGAAAGTCGGGATGGTCGAGTGGACAGTTGGCGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156385.2 |
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| CDS-3UTR GCA 90 bp | CCGAAGCTCCTTCAATCCTGGTGGATCCGTGGGGAAAGGACGGGGATGGTGAAACCGACTTTCCTCTCATaGATTTCTTTGGCTTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: PKLLQSWWIRGERTGMVKPTFLS*ISLASL Trigger: GAGAGAAGCCAAAGAAATGCATGAGAGGAAAGTCGG...TTTCACCATCCCCGTCCTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150207.8 |
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| CDS-3UTR CCA 90 bp | TCCACAATACCTCTCCTATTGGAGCAAGGGCCTCAAGGATGGCTTCCCAAGGTGCAGGATGCACCAGGATaGACAACTGACGAAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: STIPLLLEQGPQGWLPKVQDAPG*TTDETS Trigger: AGAGGTTTCGTCAGTTGTCCATCCTGGTGCATCCTG...CACCTTGGGAAGCCATCCTTGAGGCCCTTGCTCCAATAGGAGAGGTATTGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094657.10 |
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| CDS-3UTR TCA 90 bp | CCACTCGACCATCCCGACTTTCCTATAATCCCAGCACGGGAGTGGCTGAGGGAACCTTGGGCTATAAGGTaGGACTGTCTCAAAGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: PLDHPDFPIIPAREWLREPWAIR*DCLKVF Trigger: AAAAACTTTGAGACAGTCTCACCTTATAGCCCAAGG...TTCCCTCAGCCACTCCCGTGCTGGGATTATAGGAAAGTCGGGATGGTCGAGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156385.2 |
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| CDS-3UTR GCA 90 bp | CCACTCGACCATCCCGACTTTCCTATAATCCCAGCACGGGAGTGGCTGAGGGAAAAGGACAGACTAAGCTaGGTAGTGACTTCAAGATAC | + |
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Preference number: 4 (lower is better) Translates to: PLDHPDFPIIPAREWLREKDRLS*VVTSRY Trigger: GTATCTTGAAGTCACTACGCAGCTTAGTCTGTCCTT...TTCCCTCAGCCACTCCCGTGCTGGGATTATAGGAAAGTCGGGATGGTCGAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156385.2 |
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| CDS-3UTR CCA 90 bp | TGGCTTTTTCCTGGGCTTCGATCTCCTCTTCTCTCTGTCGCTTCCTCTCATGCACAGGATGCACCAGGATaGACAACTGACGAAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: WLFPGLRSPLLSVASSHAQDAPG*TTDETS Trigger: AGAGGTTTCGTCAGTTGTCCATCCTGGTGCATCCTG...TGCATGAGAGGAAGCGACAGAGAGAAGAGGAGATCGAAGCCCAGGAAAAAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138334.8 |
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| CDS-3UTR GCA 90 bp | AGGCTGATCTGGAGTCGGGGCAACACCACTGTAAGCAAGACATTTAATTGGAAAGGTCTGTTTGTAGACTaGCTGTTTGAACAGTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: RLIWSRGNTTVSKTFNWKGLFVD*LFEQFG Trigger: CCCGAACTGTTCAAACAGGCAGTCTACAAACAGACC...TTTCCAATTAAATGTCTTGCTTACAGTGGTGTTGCCCCGACTCCAGATCAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094657.10 |
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