Pregenerated sensors for DNAJC7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014195Ensembl transcript IDs: ENSMUST00000014339.15, ENSMUST00000132886.3, ENSMUST00000137688.9, ENSMUST00000146840.3, ENSMUST00000154972.9, ENSMUST00000155152.9, ENSMUST00000239389.2, ENSMUST00000239410.2, ENSMUST00000239418.2, ENSMUST00000239479.2, ENSMUST00000239490.2, ENSMUST00000239494.2, ENSMUST00000239499.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCTTTAATCCCAGCAGTCAGGAGGCAGGGGCAGGCAGGTCTTTGTaGGTTCGAGGTCAGCCTGGTGTACAGTACAAATTCCAGAACAGC | + |
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Preference number: 1 (lower is better) Translates to: AFNPSSQEAGAGRSL*VRGQPGVQYKFQNS Trigger: GCTGTTCTGGAATTTGTACTGTACACCAGGCTGACCTCGAACTCACAAAGACCTGCCTGCCCCTGCCTCCTGACTGCTGGGATTAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
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| 3UTR CCA 90 bp | GGCCGCTCTTTCAGAGGTCCTGGGTTCAATTCCCAGCAACTCACATaGCAGCTCACAGCTGTCTGTAACTCCAGTTCCAGAAGGTCTGAT | + |
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Preference number: 1 (lower is better) Translates to: GRSFRGPGFNSQQLT*QLTAVCNSSSRRSD Trigger: ATCAGACCTTCTGGAACTGGAGTTACAGACAGCTGTGAGCTGCCATGTGAGTTGCTGGGAATTGAACCCAGGACCTCTGAAAGAGCGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
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| 3UTR TCA 90 bp | TTCCACAGTACTGAGTTTAGTCCTAGCACCAGCCTCAGGGGGATTTaGTGCCCTCTTCTGGCTTCTGTAGACACAGGTATACAGGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: FHSTEFSPSTSLRGI*CPLLASVDTGIQVA Trigger: TGCCACCTGTATACCTGTGTCTACAGAAGCCAGAAGAGGGCATCAAATCCCCCTGAGGCTGGTGCTAGGACTAAACTCAGTACTGTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
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| 3UTR GCA 90 bp | AGGAGACATGATCTTCCAGGCAATAACCCTGATCTCCAACATCACTaGCACAGCCAGTACAAGTCTGCCCTCATACAAACGAAAGCACAA | + |
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Preference number: 1 (lower is better) Translates to: RRHDLPGNNPDLQHH*HSQYKSALIQTKAQ Trigger: TTGTGCTTTCGTTTGTATGAGGGCAGACTTGTACTGGCTGTGGCAGTGATGTTGGAGATCAGGGTTATTGCCTGGAAGATCATGTCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
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| 3UTR TCA 90 bp | AGAGACTATGAGATTTACCTAAAGTTGGCTAAGTGTGGCTGCTGGTaGAGTGAGACTGTCAGTCCTGCCTTATTGGTCACTCTTCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: RDYEIYLKLAKCGCW*SETVSPALLVTLLS Trigger: GGAAAGAAGAGTGACCAATAAGGCAGGACTGACAGTCTCACTTCACCAGCAGCCACACTTAGCCAACTTTAGGTAAATCTCATAGTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAACTTCGGCACTGGCCCCACTGTGCCGATCTGGATGGTGCATCAAGGCCCGACAGGCATGGGAGACTaGGGGAGCGTGTGCAATCTC | + |
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Preference number: 2 (lower is better) Translates to: LNFGTGPTVPIWMVHQGPTGMGD*GSVCNL Trigger: GAGATTGCACACGCTCCCTCAGTCTCCCATGCCTGT...CGGGCCTTGATGCACCATCCAGATCGGCACAGTGGGGCCAGTGCCGAAGTTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000239418.2 ENSMUST00000239494.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTGAACTTCGGCACTGGCCCCACTGTGCCGATCTGGATGGTGCATCAAGGACAGGCATGGGAGACTaGGGGAGCGTGTGCAATCTC | + |
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Preference number: 2 (lower is better) Translates to: PSELRHWPHCADLDGASRTGMGD*GSVCNL Trigger: GAGATTGCACACGCTCCCTCAGTCTCCCATGCCTGT...CCTTGATGCACCATCCAGATCGGCACAGTGGGGCCAGTGCCGAAGTTCAGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000239418.2 ENSMUST00000239494.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTGAACTTCGGCACTGGCCCCACTGTGCCGATCTGGATGGTGCATCAAGGTTCCCTGTCTACCCCTaGCTTCCCTCCCTCCCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: PSELRHWPHCADLDGASRFPVYP*LPSLPS Trigger: ACTAGGGAGGGAGGGAAGCCAGGGGTAGACAGGGAA...CCTTGATGCACCATCCAGATCGGCACAGTGGGGCCAGTGCCGAAGTTCAGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000239494.2 ENSMUST00000239499.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGAACTTCGGCACTGGCCCCACTGTGCCGATCTGGATGGTGCATCAAGGCCCCACAGGGCACCCGACTaGGAAAACGAAACTGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: SELRHWPHCADLDGASRPHRAPD*ENETAL Trigger: TAGAGCAGTTTCGTTTTCTCAGTCGGGTGCCCTGTG...GGGCCTTGATGCACCATCCAGATCGGCACAGTGGGGCCAGTGCCGAAGTTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000239494.2 ENSMUST00000239499.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGAGGCAGGGGCAGGCAGGTCTTTGTGAGTTCGAGGTCAGCCTGGTGTACACGAGACCAGTTAGCCTaGGCTACATGGAGACCCATT | + |
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Preference number: 2 (lower is better) Translates to: SGGRGRQVFVSSRSAWCTRDQLA*ATWRPI Trigger: AATGGGTCTCCATGTAGCCCAGGCTAACTGGTCTCG...TGTACACCAGGCTGACCTCGAACTCACAAAGACCTGCCTGCCCCTGCCTCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGGAGGCAGGGGCAGGCAGGTCTTTGTGAGTTCGAGGTCAGCCTGGTGTACAGAACTGAAAGACGTGTaGTACCAGCTTAAGCCACAT | + |
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Preference number: 2 (lower is better) Translates to: SGGRGRQVFVSSRSAWCTELKDV*YQLKPH Trigger: ATGTGGCTTAAGCTGGTAGCACACGTCTTTCAGTTC...TGTACACCAGGCTGACCTCGAACTCACAAAGACCTGCCTGCCCCTGCCTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAACGAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCCGGCATTGGCGTTCTTaGACTCCTGCTGTGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: ENETALSTQGHDGGSELSRHWRS*TPAVPG Trigger: CCCAGGCACAGCAGGAGTTCAAGAACGCCAATGCCG...GGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239499.2 |
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| 3UTR-3UTR CCA 90 bp | TCTATGGCATCTTCCAGTTGCCTAAGCTTGGAATTAACCGTACCCCGATTACAGCCTAGTCCTCAGCACTaGCCCCCTTTCCTTCACCCC | + |
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Preference number: 2 (lower is better) Translates to: SMASSSCLSLELTVPRLQPSPQH*PPFLHP Trigger: GGGGTGAAGGAAAGGGGGCCAGTGCTGAGGACTAGG...CTGTAATCGGGGTACGGTTAATTCCAAGCTTAGGCAACTGGAAGATGCCATAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239499.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCAGCCTGGTGTACAGTACAAATTCCAGAACAGCCAGGGACACACTGAGAAATCCTTAAAAAGCTGGTaGCGGGCTGGAGAGATGGCT | + |
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Preference number: 2 (lower is better) Translates to: GQPGVQYKFQNSQGHTEKSLKSW*RAGEMA Trigger: AGCCATCTCTCCAGCCCGTCACCAGCTTTTTAAGGA...TTTCTCAGTGTGTCCCTGGCTGTTCTGGAATTTGTACTGTACACCAGGCTGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
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| 3UTR-3UTR TCA 90 bp | ATCACTGCCACAGCCAGTACAAGTCTGCCCTCATACAAACGAAAGCACAAGAGTAAGTGTGGCTGCTGGTaGAGTGAGACTGTCAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: ITATASTSLPSYKRKHKSKCGCW*SETVSP Trigger: AGGACTGACAGTCTCACTTCACCAGCAGCCACACTT...ACTCTTGTGCTTTCGTTTGTATGAGGGCAGACTTGTACTGGCTGTGGCAGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
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| 3UTR CAA 90 bp | AGACAGACGAGACCAGTTAGCCTGGGCTACATGGAGACCCATTTTTaGTTTTGTTTGGAGACAAGGTCTCATGTAGCCTGGGCTAGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: RQTRPVSLGYMETHF*FCLETRSHVAWASL Trigger: TAAGCTAGCCCAGGCTACATGAGACCTTGTCTCCAAACAAAACAAAAAATGGGTCTCCATGTAGCCCAGGCTAACTGGTCTCGTCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTTCCTTCACCCCTCATACAGACACAGGGCACCCGACTGAGAAAACGAAACCAAGTCTGCATTTTCTaGGTTTTAAGTAGTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: PFPSPLIQTQGTRLRKRNQVCIF*VLSSWP Trigger: AGGCCAACTACTTAAAACCCAGAAAATGCAGACTTG...GTTTCGTTTTCTCAGTCGGGTGCCCTGTGTCTGTATGAGGGGTGAAGGAAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239494.2 ENSMUST00000239499.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAAACATTTCCTTAAAAAGCTGGTGACGGGCTGGAGAGATGGCTCAGCAGTTTCCCAGCAACTCACATaGCAGCTCACAGCTGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: IKHFLKKLVTGWRDGSAVSQQLT*QLTAVC Trigger: ACAGACAGCTGTGAGCTGCCATGTGAGTTGCTGGGA...AACTGCTGAGCCATCTCTCCAGCCCGTCACCAGCTTTTTAAGGAAATGTTTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTTTGGCATTTCTACAAGCGACACAAGCCTTCTCGTGGTCAGGAGCCATCACAGAGCATCAGCATTaGTGGAATCCATTCGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: RALAFLQATQAFSWSGAITEHQH*WNPFVK Trigger: TTTTACGAATGGATTCCACCAATGCTGATGCTCTGT...GATGGCTCCTGACCACGAGAAGGCTTGTGTCGCTTGTAGAAATGCCAAAGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239499.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGCATTTCTACAAGCGACACAAGCCTTCTCGTGGTCAGGAGCCATCCTGAGAGAGCATCAGCATTGGTaGAATCCATTCGTAAAATGT | + |
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Preference number: 2 (lower is better) Translates to: LAFLQATQAFSWSGAILREHQHW*NPFVKC Trigger: ACATTTTACGAATGGATTCCACCAATGCTGATGCTC...TCTCAGGATGGCTCCTGACCACGAGAAGGCTTGTGTCGCTTGTAGAAATGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239499.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAAACATTTCCTTAAAAAGCTGGTGACGGGCTGGAGAGATGGCTCAGCAGTTCTCTTTCAGAGGTCCTaGGTTCAATTCCCAGCAACT | + |
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Preference number: 2 (lower is better) Translates to: IKHFLKKLVTGWRDGSAVLFQRS*VQFPAT Trigger: AGTTGCTGGGAATTGAACCCAGGACCTCTGAAAGAG...AACTGCTGAGCCATCTCTCCAGCCCGTCACCAGCTTTTTAAGGAAATGTTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCATGCAAGTCTGCATTTTCTaGGTTTTAAGTAGTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: TALSTQGHDGGSELSTLMQVCIF*VLSSWP Trigger: AGGCCAACTACTTAAAACCCAGAAAATGCAGACTTG...CATGAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239494.2 ENSMUST00000239499.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAACGAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCCAAGTCTGCATTTTCTaGGTTTTAAGTAGTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: ENETALSTQGHDGGSELSQVCIF*VLSSWP Trigger: AGGCCAACTACTTAAAACCCAGAAAATGCAGACTTG...GGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239494.2 ENSMUST00000239499.2 |
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| 3UTR-3UTR CCA 90 bp | TCTATGGCATCTTCCAGTTGCCTAAGCTTGGAATTAACCGTACCCCGATTACAGCAAGTCTGCATTTTCTaGGTTTTAAGTAGTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SMASSSCLSLELTVPRLQQVCIF*VLSSWP Trigger: AGGCCAACTACTTAAAACCCAGAAAATGCAGACTTG...CTGTAATCGGGGTACGGTTAATTCCAAGCTTAGGCAACTGGAAGATGCCATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000239499.2 |
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| 3UTR-3UTR TCA 90 bp | TACCCAGTCATCTCTGAAGCTTTCCACTTTTTACATACTGAAAACTCATTTAACAAGTGTGGCTGCTGGTaGAGTGAGACTGTCAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: YPVISEAFHFLHTENSFNKCGCW*SETVSP Trigger: AGGACTGACAGTCTCACTTCACCAGCAGCCACACTT...GTTAAATGAGTTTTCAGTATGTAAAAAGTGGAAAGCTTCAGAGATGACTGGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132886.3 ENSMUST00000239479.2 |
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| 3UTR-3UTR GCA 90 bp | TTAAAGGCTTTATTCCCATCTTCCTTCTTGGCTTTAAGGGCTTTGGCATTTCTAGCGTTCTTGAACTCCTaGTGTGCCTGGGCATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: LKALFPSSFLALRALAFLAFLNS*CAWAFL Trigger: TAAAAATGCCCAGGCACAGCAGGAGTTCAAGAACGC...TAGAAATGCCAAAGCCCTTAAAGCCAAGAAGGAAGATGGGAATAAAGCCTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239499.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTATACAGGTGGCATGCGTGCATACAATATATAAACAAAATCAAGGTGAGGTCAGTCCTGCCTTATTaGTCACTCTTCTTTCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: QVYRWHACIQYINKIKVRSVLPY*SLFFPD Trigger: GTCTGGAAAGAAGAGTGACCAATAAGGCAGGACTGA...CCTCACCTTGATTTTGTTTATATATTGTATGCACGCATGCCACCTGTATACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
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| 3UTR-3UTR GCA 90 bp | GCGTGCATACAATATATAAACAAAATCAAGGTGAGGGAGATGACTCTGTGTGTATGGGATTCCAAAGTGTaGACTACCACAGAAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: ACIQYINKIKVREMTLCVWDSKV*TTTEGF Trigger: AAAGCCTTCTGTGGTAGTGCACACTTTGGAATCCCA...TACACACAGAGTCATCTCCCTCACCTTGATTTTGTTTATATATTGTATGCACGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
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| 3UTR CCA 72 bp | AGGGGCAGGCAGGTCTTTGTGAGTTCGAGGTCAGCCTaGTGTACAGTACAAATTCCAGAACAGCCAGGGACA | + |
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Preference number: 3 (lower is better) Translates to: RGRQVFVSSRSA*CTVQIPEQPGT Trigger: TGTCCCTGGCTGTTCTGGAATTTGTACTGTACACCAGGCTGACCTCGAACTCACAAAGACCTGCCTGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGGAGGCAGGGGCAGGCAGGTCTTTGTGAGTTCGAGGTCAGCCTGGTGTACAATGGAGACCCATTTTTaGTTTTGTTTGGAGACAAGG | + |
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Preference number: 3 (lower is better) Translates to: SGGRGRQVFVSSRSAWCTMETHF*FCLETR Trigger: CCTTGTCTCCAAACAAAACAAAAAATGGGTCTCCAT...TGTACACCAGGCTGACCTCGAACTCACAAAGACCTGCCTGCCCCTGCCTCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
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| 3UTR CCA 72 bp | TTCAGAGGTCCTGGGTTCAATTCCCAGCAACTCACATaGCAGCTCACAGCTGTCTGTAACTCCAGTTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: FRGPGFNSQQLT*QLTAVCNSSSR Trigger: TCTGGAACTGGAGTTACAGACAGCTGTGAGCTGCCATGTGAGTTGCTGGGAATTGAACCCAGGACCTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
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| 3UTR TCA 72 bp | TTCCTTCACCCCTCATACAGACACAGGGCACCCGACTaGGAAAACGAAACTGCTCTAAGTACACAGGGACAT | + |
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Preference number: 3 (lower is better) Translates to: FLHPSYRHRAPD*ENETALSTQGH Trigger: ATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTCTCAGTCGGGTGCCCTGTGTCTGTATGAGGGGTGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239494.2 ENSMUST00000239499.2 |
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| 3UTR TCA 72 bp | AAATATGGCCACCATAAGCCAGGGGTTGGGCAGTTTTaGGATGCTCACTCAGATGTGTCCAGGCACCTACTA | + |
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Preference number: 3 (lower is better) Translates to: KYGHHKPGVGQF*DAHSDVSRHLL Trigger: TAGTAGGTGCCTGGACACATCTGAGTGAGCATCTCAAAACTGCCCAACCCCTGGCTTATGGTGGCCATATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
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| 3UTR GCA 72 bp | GATCTTCCAGGCAATAACCCTGATCTCCAACATCACTaGCACAGCCAGTACAAGTCTGCCCTCATACAAACG | + |
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Preference number: 3 (lower is better) Translates to: DLPGNNPDLQHH*HSQYKSALIQT Trigger: CGTTTGTATGAGGGCAGACTTGTACTGGCTGTGGCAGTGATGTTGGAGATCAGGGTTATTGCCTGGAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
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| 3UTR CCA 72 bp | AGAATTAAACATTTCCTTAAAAAGCTGGTGACGGGCTaGAGAGATGGCTCAGCAGTTAAGAGCACTGGCCGC | + |
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Preference number: 3 (lower is better) Translates to: RIKHFLKKLVTG*RDGSAVKSTGR Trigger: GCGGCCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCGTCACCAGCTTTTTAAGGAAATGTTTAATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCAACTCACATGGCAGCTCACAGCTGTCTGTAACTCCAGTTCCAGAAGGTCTATGGAGACCCATTTTTaGTTTTGTTTGGAGACAAGG | + |
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Preference number: 3 (lower is better) Translates to: QQLTWQLTAVCNSSSRRSMETHF*FCLETR Trigger: CCTTGTCTCCAAACAAAACAAAAAATGGGTCTCCAT...AGACCTTCTGGAACTGGAGTTACAGACAGCTGTGAGCTGCCATGTGAGTTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
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| 3UTR TCA 72 bp | GAGATTTACCTAAAGTTGGCTAAGTGTGGCTGCTGGTaGAGTGAGACTGTCAGTCCTGCCTTATTGGTCACT | + |
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Preference number: 3 (lower is better) Translates to: EIYLKLAKCGCW*SETVSPALLVT Trigger: AGTGACCAATAAGGCAGGACTGACAGTCTCACTTCACCAGCAGCCACACTTAGCCAACTTTAGGTAAATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
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| 3UTR TCA 72 bp | AGAGATCCTATCTTGCTGGTCAGTGTAATGTCCACTTaGGAAGCAAAGGGCAGCTTGCTCTATACATCCAGC | + |
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Preference number: 3 (lower is better) Translates to: RDPILLVSVMST*EAKGSLLYTSS Trigger: GCTGGATGTATAGAGCAAGCTGCCCTTTGCTTCTCAAGTGGACATTACACTGACCAGCAAGATAGGATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
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| 3UTR-3UTR CAA 90 bp | TCTATGGCATCTTCCAGTTGCCTAAGCTTGGAATTAACCGTACCCCGATTACAGTTTGTTTTTATGTTGTaGGGATCTATCCCCAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: SMASSSCLSLELTVPRLQFVFML*GSIPKA Trigger: AGCCTTGGGGATAGATCCCAACAACATAAAAACAAA...CTGTAATCGGGGTACGGTTAATTCCAAGCTTAGGCAACTGGAAGATGCCATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000239499.2 |
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| 3UTR-3UTR CAA 90 bp | AATGCTTTAATTTCGTTCCTTAGCTTCCTTCCTGAAGCATTATGCGTCTACCCAGTCAGTCCTGCCTTATaGGTCACTCTTCTTTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: NALISFLSFLPEALCVYPVSPAL*VTLLSR Trigger: TCTGGAAAGAAGAGTGACCAATAAGGCAGGACTGAC...TGGGTAGACGCATAATGCTTCAGGAAGGAAGCTAAGGAACGAAATTAAAGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
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| 3UTR GCA 72 bp | CTTCTGGCTTCTGTAGACACAGGTATACAGGTGGCATaGGTGCATACAATATATAAACAAAATCAAGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: LLASVDTGIQVA*VHTIYKQNQGE Trigger: CTCACCTTGATTTTGTTTATATATTGTATGCACGCATGCCACCTGTATACCTGTGTCTACAGAAGCCAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
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| 3UTR-3UTR CAA 90 bp | GTGCATACAATATATAAACAAAATCAAGGTGAGGGAGATGACTCTGTGTGTAAAGGTGCATTTCCAGACTaGAAACCCTATCTTTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: VHTIYKQNQGEGDDSVCKGAFPD*KPYLLK Trigger: TTTTAAAAGATAGGGTTTCAAGTCTGGAAATGCACC...TTTACACACAGAGTCATCTCCCTCACCTTGATTTTGTTTATATATTGTATGCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
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| CDS-3UTR TCA 90 bp | CCATGTAACGTGAGGGGCGTTAGACACAGGCATGGGAGACTGAGGGAGCGTGTGCGGCATTGGCGTTCTTaGACTCCTGCTGTGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PCNVRGVRHRHGRLRERVRHWRS*TPAVPG Trigger: CCCAGGCACAGCAGGAGTTCAAGAACGCCAATGCCG...CACACGCTCCCTCAGTCTCCCATGCCTGTGTCTAACGCCCCTCACGTTACATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239418.2 |
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| CDS-3UTR CCA 90 bp | CCTTCTGAACTTCGGCACTGGCCCCACTGTGCCGATCTGGATGGTGCATCAAGGTTCCCAAGTGAGAGGTaGCACTTGCCTTCTCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PSELRHWPHCADLDGASRFPSER*HLPSRR Trigger: CCTCCGAGAAGGCAAGTGCCACCTCTCACTTGGGAA...CCTTGATGCACCATCCAGATCGGCACAGTGGGGCCAGTGCCGAAGTTCAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000239418.2 ENSMUST00000239499.2 |
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| CDS-3UTR TCA 90 bp | CCCTTTCCTTCACCCCTCATACAGACACAGGGCACCCGACTGAGAAAACGAAACCAGATGCTTCAAAGCTaGAGCCCCCAGGACCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: PFPSPLIQTQGTRLRKRNQMLQS*SPQDHR Trigger: TCGGTGGTCCTGGGGGCTTCAGCTTTGAAGCATCTG...GTTTCGTTTTCTCAGTCGGGTGCCCTGTGTCTGTATGAGGGGTGAAGGAAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR CCA 90 bp | TCTGAACTTCGGCACTGGCCCCACTGTGCCGATCTGGATGGTGCATCAAGGCCCCAAGCATCATCAGTGTaGCCGCTCGATTACCGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SELRHWPHCADLDGASRPQASSV*PLDYRN Trigger: ATTACGGTAATCGAGCGGCCACACTGATGATGCTTG...GGGCCTTGATGCACCATCCAGATCGGCACAGTGGGGCCAGTGCCGAAGTTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000239418.2 ENSMUST00000239499.2 |
||
| CDS-3UTR CCA 90 bp | CCCGCACGGCTTCTTCAAACTGCTCTGTGTCCATGTAACGTGAGGGGCGTTAGATTCCCAAGTGAGAGGTaGCACTTGCCTTCTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PARLLQTALCPCNVRGVRFPSER*HLPSRR Trigger: CCTCCGAGAAGGCAAGTGCCACCTCTCACTTGGGAA...TCTAACGCCCCTCACGTTACATGGACACAGAGCAGTTTGAAGAAGCCGTGCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239418.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGAGGCAGGGGCAGGCAGGTCTTTGTGAGTTCGAGGTCAGCCTGGTGTACAGTGCATTTCCAGACTTaGAACCCTATCTCCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGGRGRQVFVSSRSAWCTVHFQT*NPISCC Trigger: ACAGCAGGAGATAGGGTTTCAAGTCTGGAAATGCAC...TGTACACCAGGCTGACCTCGAACTCACAAAGACCTGCCTGCCCCTGCCTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154972.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCTGAACTTCGGCACTGGCCCCACTGTGCCGATCTGGATGGTGCATCAAGGTTCCTTGAAGGATTCTaGTTCCCTCTTGGCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSELRHWPHCADLDGASRFLEGF*FPLGVF Trigger: GAAGACGCCAAGAGGGAAGCAGAATCCTTCAAGGAA...CCTTGATGCACCATCCAGATCGGCACAGTGGGGCCAGTGCCGAAGTTCAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000239418.2 ENSMUST00000239499.2 |
||
| CDS-3UTR CCA 90 bp | CCCGCACGGCTTCTTCAAACTGCTCTGTGTCCATGTAACGTGAGGGGCGTTAGAACACAAGCCTTCTCGTaGTCAGGAGCCATCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PARLLQTALCPCNVRGVRTQAFS*SGAILR Trigger: TCTCAGGATGGCTCCTGACCACGAGAAGGCTTGTGT...TCTAACGCCCCTCACGTTACATGGACACAGAGCAGTTTGAAGAAGCCGTGCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239418.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCATGCGGCATTGGCGTTCTTaGACTCCTGCTGTGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TALSTQGHDGGSELSTLMRHWRS*TPAVPG Trigger: CCCAGGCACAGCAGGAGTTCAAGAACGCCAATGCCG...CATGAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR TCA 90 bp | GAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCCGGCATTGGCGTTCTTaGACTCCTGCTGTGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ETALSTQGHDGGSELSTLRHWRS*TPAVPG Trigger: CCCAGGCACAGCAGGAGTTCAAGAACGCCAATGCCG...GAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR GCA 90 bp | ACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCATGGCACTGGCCCCACTGTaGCGATCTGGATGGTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TALSTQGHDGGSELSTLMALAPL*RSGWCI Trigger: GATGCACCATCCAGATCGGCACAGTGGGGCCAGTGC...CATGAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR CCA 90 bp | GAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCCCCACTGTGCCGATCTaGATGGTGCATCAAGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ETALSTQGHDGGSELSTLPTVPI*MVHQGP Trigger: CGGGCCTTGATGCACCATCCAGATCGGCACAGTGGG...GAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR TCA 90 bp | ACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCATGTTCTCCTCCTCCTTCTaGACTTCGGCACTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TALSTQGHDGGSELSTLMFSSSF*TSALAP Trigger: TGGGGCCAGTGCCGAAGTTCAGAAGGAGGAGGAGAA...CATGAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR TCA 90 bp | GAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCCAGATGCTTCAAAGCTaGAGCCCCCAGGACCACCGA | + |
|
Preference number: 4 (lower is better) Translates to: ETALSTQGHDGGSELSTLQMLQS*SPQDHR Trigger: TCGGTGGTCCTGGGGGCTTCAGCTTTGAAGCATCTG...GAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR GCA 90 bp | CCCGCACGGCTTCTTCAAACTGCTCTGTGTCCATGTAACGTGAGGGGCGTTAGAGCGTTCTTGAACTCCTaGTGTGCCTGGGCATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PARLLQTALCPCNVRGVRAFLNS*CAWAFL Trigger: TAAAAATGCCCAGGCACAGCAGGAGTTCAAGAACGC...TCTAACGCCCCTCACGTTACATGGACACAGAGCAGTTTGAAGAAGCCGTGCGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239418.2 |
||
| CDS-3UTR GCA 90 bp | GAAAACGAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCGCACTGGCCCCACTGTaGCGATCTGGATGGTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ENETALSTQGHDGGSELSALAPL*RSGWCI Trigger: GATGCACCATCCAGATCGGCACAGTGGGGCCAGTGC...GGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR TCA 90 bp | GAAAACGAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCTTCTCCTCCTCCTTCTaGACTTCGGCACTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ENETALSTQGHDGGSELSFSSSF*TSALAP Trigger: TGGGGCCAGTGCCGAAGTTCAGAAGGAGGAGGAGAA...GGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR GCA 90 bp | AGTCCCGCACGGCTTCTTCAAACTGCTCTGTGTCCATGTAACGTGAGGGGCGTTCTTGAACTCCTGCTGTaGCTGGGCATTTTTATGATC | + |
|
Preference number: 4 (lower is better) Translates to: SPARLLQTALCPCNVRGVLELLL*LGIFMI Trigger: GATCATAAAAATGCCCAGGCACAGCAGGAGTTCAAG...AACGCCCCTCACGTTACATGGACACAGAGCAGTTTGAAGAAGCCGTGCGGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239418.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTTCCTTCACCCCTCATACAGACACAGGGCACCCGACTGAGAAAACGAAACGCGTTCTTGAACTCCTaGTGTGCCTGGGCATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PFPSPLIQTQGTRLRKRNAFLNS*CAWAFL Trigger: TAAAAATGCCCAGGCACAGCAGGAGTTCAAGAACGC...GTTTCGTTTTCTCAGTCGGGTGCCCTGTGTCTGTATGAGGGGTGAAGGAAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR CCA 90 bp | CCATGTAACGTGAGGGGCGTTAGACACAGGCATGGGAGACTGAGGGAGCGTGTGACAGAGCATCAGCATTaGTGGAATCCATTCGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PCNVRGVRHRHGRLRERVTEHQH*WNPFVK Trigger: TTTTACGAATGGATTCCACCAATGCTGATGCTCTGT...CACACGCTCCCTCAGTCTCCCATGCCTGTGTCTAACGCCCCTCACGTTACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239418.2 |
||
| CDS-3UTR GCA 90 bp | CCCTTTCCTTCACCCCTCATACAGACACAGGGCACCCGACTGAGAAAACGAAACAGGACCACCGAAGAATaGCTTGAAGATGTTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFPSPLIQTQGTRLRKRNRTTEE*LEDVVC Trigger: GCAAACAACATCTTCAAGGCATTCTTCGGTGGTCCT...GTTTCGTTTTCTCAGTCGGGTGCCCTGTGTCTGTATGAGGGGTGAAGGAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR GCA 90 bp | ACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCATGTTCCTTGAAGGATTCTaGTTCCCTGGACCGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TALSTQGHDGGSELSTLMFLEGF*FPGPPS Trigger: AGACGGCGGTCCAGGGAAGCAGAATCCTTCAAGGAA...CATGAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146840.3 |
||
| CDS-3UTR CCA 90 bp | GAAAACGAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCTTCCCAAGTGAGAGGTaGCACTTGCCTTCTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ENETALSTQGHDGGSELSFPSER*HLPSRR Trigger: CCTCCGAGAAGGCAAGTGCCACCTCTCACTTGGGAA...GGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239499.2 |
||
| CDS-3UTR CCA 90 bp | AGCATAGACCAGTTCTTTCTGACAAACCCAAGGTCTGAAACCGAGACTCAGAACTTCCCAAGTGAGAGGTaGCACTTGCCTTCTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIDQFFLTNPRSETETQNFPSER*HLPSRR Trigger: CCTCCGAGAAGGCAAGTGCCACCTCTCACTTGGGAA...GTTCTGAGTCTCGGTTTCAGACCTTGGGTTTGTCAGAAAGAACTGGTCTATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132886.3 ENSMUST00000239479.2 |
||
| CDS-3UTR CCA 90 bp | CCATGTAACGTGAGGGGCGTTAGACACAGGCATGGGAGACTGAGGGAGCGTGTGTTGTTTTTATGTTGTTaGGATCTATCCCCAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PCNVRGVRHRHGRLRERVLFLCC*DLSPRL Trigger: AAGCCTTGGGGATAGATCCCAACAACATAAAAACAA...CACACGCTCCCTCAGTCTCCCATGCCTGTGTCTAACGCCCCTCACGTTACATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000239418.2 |
||
| CDS-3UTR CCA 90 bp | GTAATGACCGTGAGGGGCGTTAGACACAGGCATGGGAGACTGAGGGAGCGTGTGTTGTTTTTATGTTGTTaGGATCTATCCCCAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VMTVRGVRHRHGRLRERVLFLCC*DLSPRL Trigger: AAGCCTTGGGGATAGATCCCAACAACATAAAAACAA...CACACGCTCCCTCAGTCTCCCATGCCTGTGTCTAACGCCCCTCACGGTCATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000239494.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCCGCACGGCTTCTTCAAACTGCTCTGTGTCCATGTAACGTGAGGGGCGTTGAGCATCAGCATTGGTaGAATCCATTCGTAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SPARLLQTALCPCNVRGVEHQHW*NPFVKC Trigger: ACATTTTACGAATGGATTCCACCAATGCTGATGCTC...AACGCCCCTCACGTTACATGGACACAGAGCAGTTTGAAGAAGCCGTGCGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239418.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACGAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACAAGCCTTCTCGTaGTCAGGAGCCATCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ENETALSTQGHDGGSELSTQAFS*SGAILR Trigger: TCTCAGGATGGCTCCTGACCACGAGAAGGCTTGTGT...GGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR TCA 90 bp | GAAAACGAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCCATTCCCTTGTTCCTTaGAGGATTCTGCTTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ENETALSTQGHDGGSELSHSLVP*RILLPW Trigger: CCAGGGAAGCAGAATCCTTCAAGGAACAAGGGAATG...GGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146840.3 |
||
| CDS-3UTR GCA 90 bp | GAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCGCGTTCTTGAACTCCTaGTGTGCCTGGGCATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ETALSTQGHDGGSELSTLAFLNS*CAWAFL Trigger: TAAAAATGCCCAGGCACAGCAGGAGTTCAAGAACGC...GAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR CCA 90 bp | ACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCATGCAAGCATCATCAGTGTaGCCGCTCGATTACCGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TALSTQGHDGGSELSTLMQASSV*PLDYRN Trigger: ATTACGGTAATCGAGCGGCCACACTGATGATGCTTG...CATGAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239499.2 |
||
| CDS-3UTR CCA 90 bp | GAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCCAAGCATCATCAGTGTaGCCGCTCGATTACCGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ETALSTQGHDGGSELSTLQASSV*PLDYRN Trigger: ATTACGGTAATCGAGCGGCCACACTGATGATGCTTG...GAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239499.2 |
||
| CDS-3UTR GCA 90 bp | GAAAACGAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCTTCCTTGAAGGATTCTaGTTCCCTCTTGGCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ENETALSTQGHDGGSELSFLEGF*FPLGVF Trigger: GAAGACGCCAAGAGGGAAGCAGAATCCTTCAAGGAA...GGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000239499.2 |
||
| CDS-3UTR GCA 90 bp | AGCATAGACCAGTTCTTTCTGACAAACCCAAGGTCTGAAACCGAGACTCAGAACTTCCTTGAAGGATTCTaGTTCCCTCTTGGCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIDQFFLTNPRSETETQNFLEGF*FPLGVF Trigger: GAAGACGCCAAGAGGGAAGCAGAATCCTTCAAGGAA...GTTCTGAGTCTCGGTTTCAGACCTTGGGTTTGTCAGAAAGAACTGGTCTATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132886.3 ENSMUST00000239479.2 |
||
| CDS-3UTR GCA 90 bp | GAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCCTTGAACTCCTGCTGTaGCTGGGCATTTTTATGATC | + |
|
Preference number: 4 (lower is better) Translates to: ETALSTQGHDGGSELSTLLELLL*LGIFMI Trigger: GATCATAAAAATGCCCAGGCACAGCAGGAGTTCAAG...GAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR GCA 90 bp | ACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCATGAGGACCACCGAAGAATaGCTTGAAGATGTTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TALSTQGHDGGSELSTLMRTTEE*LEDVVC Trigger: GCAAACAACATCTTCAAGGCATTCTTCGGTGGTCCT...CATGAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR CCA 90 bp | AATGCTTTAATTTCGTTCCTTAGCTTCCTTCCTGAAGCATTATGCGTCTACCCATTCCCAAGTGAGAGGTaGCACTTGCCTTCTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NALISFLSFLPEALCVYPFPSER*HLPSRR Trigger: CCTCCGAGAAGGCAAGTGCCACCTCTCACTTGGGAA...TGGGTAGACGCATAATGCTTCAGGAAGGAAGCTAAGGAACGAAATTAAAGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132886.3 ENSMUST00000239479.2 |
||
| CDS-3UTR GCA 90 bp | GAAAACGAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCCTTGAACTCCTGCTGTaGCTGGGCATTTTTATGATC | + |
|
Preference number: 4 (lower is better) Translates to: ENETALSTQGHDGGSELSLELLL*LGIFMI Trigger: GATCATAAAAATGCCCAGGCACAGCAGGAGTTCAAG...GGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR GCA 90 bp | TGTTTGGAGACAAGGTCTCATGTAGCCTGGGCTAGCTTAAACTTGTTATGTAGCCCCTATCTCCTGCTGTaGCTGGGCATTTTTATGATC | + |
|
Preference number: 4 (lower is better) Translates to: CLETRSHVAWASLNLLCSPYLLL*LGIFMI Trigger: GATCATAAAAATGCCCAGGCACAGCAGGAGATAGGG...GCTACATAACAAGTTTAAGCTAGCCCAGGCTACATGAGACCTTGTCTCCAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154972.9 |
||
| CDS-3UTR CCA 90 bp | GAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCAAAGTAGAAATTCCCTaGGCCAGATGCTTCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETALSTQGHDGGSELSTLKVEIP*ARCFKA Trigger: AGCTTTGAAGCATCTGGCCCAGGGAATTTCTACTTT...GAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR CCA 90 bp | GAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCGAGCATCAGCATTGGTaGAATCCATTCGTAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ETALSTQGHDGGSELSTLEHQHW*NPFVKC Trigger: ACATTTTACGAATGGATTCCACCAATGCTGATGCTC...GAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR CCA 90 bp | ACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCATGACAGAGCATCAGCATTaGTGGAATCCATTCGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TALSTQGHDGGSELSTLMTEHQH*WNPFVK Trigger: TTTTACGAATGGATTCCACCAATGCTGATGCTCTGT...CATGAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR GCA 90 bp | CTGCAGATGGTCTTGAACTTGTCCTTCAGTTTCCATTGTCTAAGTAATGGGATTTTCCTTGAAGGATTCTaGTTCCCTCTTGGCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQMVLNLSFSFHCLSNGIFLEGF*FPLGVF Trigger: GAAGACGCCAAGAGGGAAGCAGAATCCTTCAAGGAA...AATCCCATTACTTAGACAATGGAAACTGAAGGACAAGTTCAAGACCATCTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
||
| CDS-3UTR CCA 90 bp | GATACTCTCATAGCAATACACATAAAATTAGTGACAAATAGACCCCTCCAATACTTCCCAAGTGAGAGGTaGCACTTGCCTTCTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DTLIAIHIKLVTNRPLQYFPSER*HLPSRR Trigger: CCTCCGAGAAGGCAAGTGCCACCTCTCACTTGGGAA...GTATTGGAGGGGTCTATTTGTCACTAATTTTATGTGTATTGCTATGAGAGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTCTTGAACTTGTCCTTCAGTTTCCATTGTCTAAGTAATGGGATTCCAAAGTTCCTTGAAGGATTCTaGTTCCCTCTTGGCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MVLNLSFSFHCLSNGIPKFLEGF*FPLGVF Trigger: GAAGACGCCAAGAGGGAAGCAGAATCCTTCAAGGAA...CTTTGGAATCCCATTACTTAGACAATGGAAACTGAAGGACAAGTTCAAGACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACGAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCTTGTTTTTATGTTGTTaGGATCTATCCCCAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ENETALSTQGHDGGSELSLFLCC*DLSPRL Trigger: AAGCCTTGGGGATAGATCCCAACAACATAAAAACAA...GGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239494.2 |
||
| CDS-3UTR CCA 90 bp | TACCCAGTCATCTCTGAAGCTTTCCACTTTTTACATACTGAAAACTCATTTAACCAAGCATCATCAGTGTaGCCGCTCGATTACCGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: YPVISEAFHFLHTENSFNQASSV*PLDYRN Trigger: ATTACGGTAATCGAGCGGCCACACTGATGATGCTTG...GTTAAATGAGTTTTCAGTATGTAAAAAGTGGAAAGCTTCAGAGATGACTGGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000132886.3 ENSMUST00000239479.2 |
||
| CDS-3UTR CCA 90 bp | TCTGATACTCTCATAGCAATACACATAAAATTAGTGACAAATAGACCCCTCCAACAAGCATCATCAGTGTaGCCGCTCGATTACCGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SDTLIAIHIKLVTNRPLQQASSV*PLDYRN Trigger: ATTACGGTAATCGAGCGGCCACACTGATGATGCTTG...TTGGAGGGGTCTATTTGTCACTAATTTTATGTGTATTGCTATGAGAGTATCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
||
| 3UTR CAA 72 bp | ACAGAAAAGGTCAAGACCCAAGTTTCTTGTTTAATGTaGACTTCCTGTCAGGAAGACAGGAGACATAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: TEKVKTQVSCLM*TSCQEDRRHKI Trigger: TATTTTATGTCTCCTGTCTTCCTGACAGGAAGTCAACATTAAACAAGAAACTTGGGTCTTGACCTTTTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239479.2 |
||
| CDS CCA 90 bp | CCAGAGGGACTCCCTCGAGCCCGTCTACCAACGAGAGGCTCCGCTTaGGGCCAGAGCGGCCTTCCATCCCTGGAGGTCCACGGTGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PEGLPRARLPTRGSA*GQSGLPSLEVHGGL Trigger: GAGACCACCGTGGACCTCCAGGGATGGAAGGCCGCTCTGGCCCCAAGCGGAGCCTCTCGTTGGTAGACGGGCTCGAGGGAGTCCCTCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239410.2 |
||
| CDS-3UTR CAA 90 bp | TCTGAACTTCGGCACTGGCCCCACTGTGCCGATCTGGATGGTGCATCAAGGCCCTCCAGTTGCCTAAGCTaGGAATTAACCGTACCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SELRHWPHCADLDGASRPSSCLS*ELTVPR Trigger: TCGGGGTACGGTTAATTCCAAGCTTAGGCAACTGGA...GGGCCTTGATGCACCATCCAGATCGGCACAGTGGGGCCAGTGCCGAAGTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000239418.2 ENSMUST00000239494.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCTGAACTTCGGCACTGGCCCCACTGTGCCGATCTGGATGGTGCATCAAGGGCATTCCCTTGTTCCTaGAAGGATTCTGCTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSELRHWPHCADLDGASRAFPCS*KDSASL Trigger: GAGGGAAGCAGAATCCTTCAAGGAACAAGGGAATGC...CCTTGATGCACCATCCAGATCGGCACAGTGGGGCCAGTGCCGAAGTTCAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000239418.2 ENSMUST00000239499.2 |
||
| CDS CCA 90 bp | CTTTGGAAACTACGACATGCCGCCATTGCATTCCCAAGTGAGAGGTaGCACTTGCCTTCTCGGAGGTGTCCCCGGACAAAACTGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LWKLRHAAIAFPSER*HLPSRRCPRTKLSS Trigger: GGATGACAGTTTTGTCCGGGGACACCTCCGAGAAGGCAAGTGCCACCTCTCACTTGGGAATGCAATGGCGGCATGTCGTAGTTTCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000014339.15 ENSMUST00000132886.3 ENSMUST00000137688.9 ENSMUST00000146840.3 ENSMUST00000154972.9 ENSMUST00000239389.2 ENSMUST00000239410.2 ENSMUST00000239418.2 ENSMUST00000239490.2 |
||
| CDS-3UTR CAA 90 bp | GTGACGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGGCCGCTCTTTCAGAGGTGCATTTCCAGACTaGAAACCCTATCTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VTGWRDGSAVKSTGRSFRGAFPD*KPYLLL Trigger: CAGCAGGAGATAGGGTTTCAAGTCTGGAAATGCACC...TCTGAAAGAGCGGCCAGTGCTCTTAACTGCTGAGCCATCTCTCCAGCCCGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154972.9 |
||
| CDS-3UTR CAA 90 bp | GGCTCAGCAGTTAAGAGCACTGGCCGCTCTTTCAGAGGTCCTGGGTTCAATTCCGCATTCCCTTGTTCCTaGAAGGATTCTGCTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSAVKSTGRSFRGPGFNSAFPCS*KDSASL Trigger: GAGGGAAGCAGAATCCTTCAAGGAACAAGGGAATGC...GGAATTGAACCCAGGACCTCTGAAAGAGCGGCCAGTGCTCTTAACTGCTGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCCGCACGGCTTCTTCAAACTGCTCTGTGTCCATGTAACGTGAGGGGCGTTCGAGCTTCACCGCATTaGTACAGTCTTCTATGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPARLLQTALCPCNVRGVRASPH*YSLLWH Trigger: ATGCCATAGAAGACTGTACAAATGCGGTGAAGCTCG...AACGCCCCTCACGTTACATGGACACAGAGCAGTTTGAAGAAGCCGTGCGGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239418.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCTGAACTTCGGCACTGGCCCCACTGTGCCGATCTGGATGGTGCATCAAGGATAATATGCATTCCCTaGTTCCTTGAAGGATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSELRHWPHCADLDGASRIICIP*FLEGFC Trigger: GCAGAATCCTTCAAGGAACAAGGGAATGCATATTAT...CCTTGATGCACCATCCAGATCGGCACAGTGGGGCCAGTGCCGAAGTTCAGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000239418.2 ENSMUST00000239499.2 |
||
| CDS-3UTR CAA 90 bp | CCCGCACGGCTTCTTCAAACTGCTCTGTGTCCATGTAACGTGAGGGGCGTTAGATTGGCTTTAAGGGCTTaGGCATTTCTACAAGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: PARLLQTALCPCNVRGVRLALRA*AFLQAT Trigger: TGTCGCTTGTAGAAATGCCAAAGCCCTTAAAGCCAA...TCTAACGCCCCTCACGTTACATGGACACAGAGCAGTTTGAAGAAGCCGTGCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239418.2 |
||
| CDS-3UTR CAA 90 bp | GTAATGACCGTGAGGGGCGTTAGACACAGGCATGGGAGACTGAGGGAGCGTGTGTTTGTTTTTATGTTGTaGGGATCTATCCCCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VMTVRGVRHRHGRLRERVFVFML*GSIPKA Trigger: AGCCTTGGGGATAGATCCCAACAACATAAAAACAAA...CACACGCTCCCTCAGTCTCCCATGCCTGTGTCTAACGCCCCTCACGGTCATTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000239494.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTTCCTTCACCCCTCATACAGACACAGGGCACCCGACTGAGAAAACGAAACCGAGCTTCACCGCATTaGTACAGTCTTCTATGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PFPSPLIQTQGTRLRKRNRASPH*YSLLWH Trigger: ATGCCATAGAAGACTGTACAAATGCGGTGAAGCTCG...GTTTCGTTTTCTCAGTCGGGTGCCCTGTGTCTGTATGAGGGGTGAAGGAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239494.2 |
||
| CDS-3UTR CAA 90 bp | GAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCGCATTCCCTTGTTCCTaGAAGGATTCTGCTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ETALSTQGHDGGSELSTLAFPCS*KDSASL Trigger: GAGGGAAGCAGAATCCTTCAAGGAACAAGGGAATGC...GAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000239499.2 |
||
| CDS-3UTR CAA 90 bp | CCCGCACGGCTTCTTCAAACTGCTCTGTGTCCATGTAACGTGAGGGGCGTTAGATTTGTTTTTATGTTGTaGGGATCTATCCCCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PARLLQTALCPCNVRGVRFVFML*GSIPKA Trigger: AGCCTTGGGGATAGATCCCAACAACATAAAAACAAA...TCTAACGCCCCTCACGTTACATGGACACAGAGCAGTTTGAAGAAGCCGTGCGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000239418.2 |
||
| CDS-3UTR CAA 90 bp | GAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCTCCAGTTGCCTAAGCTaGGAATTAACCGTACCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: ETALSTQGHDGGSELSTLSSCLS*ELTVPR Trigger: TCGGGGTACGGTTAATTCCAAGCTTAGGCAACTGGA...GAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239494.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTTCCTTCACCCCTCATACAGACACAGGGCACCCGACTGAGAAAACGAAACGCTGTTTGTGTTCTTTaGTTTTCTCCGTCTGATACA | + |
|
Preference number: 5 (lower is better) Translates to: PFPSPLIQTQGTRLRKRNAVCVL*FSPSDT Trigger: TGTATCAGACGGAGAAAACAAAAGAACACAAACAGC...GTTTCGTTTTCTCAGTCGGGTGCCCTGTGTCTGTATGAGGGGTGAAGGAAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR CAA 90 bp | CAGCAACTCACATGGCAGCTCACAGCTGTCTGTAACTCCAGTTCCAGAAGGTCTATAATATGCATTCCCTaGTTCCTTGAAGGATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QQLTWQLTAVCNSSSRRSIICIP*FLEGFC Trigger: GCAGAATCCTTCAAGGAACAAGGGAATGCATATTAT...AGACCTTCTGGAACTGGAGTTACAGACAGCTGTGAGCTGCCATGTGAGTTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCATGTTGGCTTTAAGGGCTTaGGCATTTCTACAAGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: TALSTQGHDGGSELSTLMLALRA*AFLQAT Trigger: TGTCGCTTGTAGAAATGCCAAAGCCCTTAAAGCCAA...CATGAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239494.2 |
||
| CDS-3UTR CAA 90 bp | GAAAACGAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCCGAGCTTCACCGCATTaGTACAGTCTTCTATGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ENETALSTQGHDGGSELSRASPH*YSLLWH Trigger: ATGCCATAGAAGACTGTACAAATGCGGTGAAGCTCG...GGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239494.2 |
||
| CDS-3UTR CAA 90 bp | GAAAACGAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCTTGGCTTTAAGGGCTTaGGCATTTCTACAAGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: ENETALSTQGHDGGSELSLALRA*AFLQAT Trigger: TGTCGCTTGTAGAAATGCCAAAGCCCTTAAAGCCAA...GGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239494.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCATGATAATATGCATTCCCTaGTTCCTTGAAGGATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TALSTQGHDGGSELSTLMIICIP*FLEGFC Trigger: GCAGAATCCTTCAAGGAACAAGGGAATGCATATTAT...CATGAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239499.2 |
||
| CDS-3UTR CAA 90 bp | GAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCATAATATGCATTCCCTaGTTCCTTGAAGGATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ETALSTQGHDGGSELSTLIICIP*FLEGFC Trigger: GCAGAATCCTTCAAGGAACAAGGGAATGCATATTAT...GAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239499.2 |
||
| CDS-3UTR CAA 90 bp | GAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCTTTGTTTTTATGTTGTaGGGATCTATCCCCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ETALSTQGHDGGSELSTLFVFML*GSIPKA Trigger: AGCCTTGGGGATAGATCCCAACAACATAAAAACAAA...GAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239494.2 |
||
| CDS-3UTR CAA 90 bp | GAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCACACTCGCTGTTTGTGTTCTTTaGTTTTCTCCGTCTGATACA | + |
|
Preference number: 5 (lower is better) Translates to: ETALSTQGHDGGSELSTLAVCVL*FSPSDT Trigger: TGTATCAGACGGAGAAAACAAAAGAACACAAACAGC...GAGTGTGGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 |
||
| CDS-3UTR CAA 90 bp | TCAAATGCTTTAATTTCGTTCCTTAGCTTCCTTCCTGAAGCATTATGCGTCTACGCATTCCCTTGTTCCTaGAAGGATTCTGCTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SNALISFLSFLPEALCVYAFPCS*KDSASL Trigger: GAGGGAAGCAGAATCCTTCAAGGAACAAGGGAATGC...GTAGACGCATAATGCTTCAGGAAGGAAGCTAAGGAACGAAATTAAAGCATTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132886.3 ENSMUST00000239479.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTTAAGCCACATCTGAGCATAGACCAGTTCTTTCTGACAAACCCAAGGTCTATAATATGCATTCCCTaGTTCCTTGAAGGATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QLKPHLSIDQFFLTNPRSIICIP*FLEGFC Trigger: GCAGAATCCTTCAAGGAACAAGGGAATGCATATTAT...AGACCTTGGGTTTGTCAGAAAGAACTGGTCTATGCTCAGATGTGGCTTAAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132886.3 ENSMUST00000239479.2 |
||
| CDS-3UTR CAA 90 bp | GAAAACGAAACTGCTCTAAGTACACAGGGACATGATGGAGGAAGTGAACTGTCCTTTGTTTTTATGTTGTaGGGATCTATCCCCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ENETALSTQGHDGGSELSFVFML*GSIPKA Trigger: AGCCTTGGGGATAGATCCCAACAACATAAAAACAAA...GGACAGTTCACTTCCTCCATCATGTCCCTGTGTACTTAGAGCAGTTTCGTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000014339.15 ENSMUST00000146840.3 ENSMUST00000239494.2 |
||
| CDS-3UTR CAA 90 bp | ATTAAACATTTCCTTAAAAAGCTGGTGACGGGCTGGAGAGATGGCTCAGCAGTTATAATATGCATTCCCTaGTTCCTTGAAGGATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IKHFLKKLVTGWRDGSAVIICIP*FLEGFC Trigger: GCAGAATCCTTCAAGGAACAAGGGAATGCATATTAT...AACTGCTGAGCCATCTCTCCAGCCCGTCACCAGCTTTTTAAGGAAATGTTTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
||
| CDS-3UTR CAA 90 bp | TCTGATACTCTCATAGCAATACACATAAAATTAGTGACAAATAGACCCCTCCAAGCATTCCCTTGTTCCTaGAAGGATTCTGCTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SDTLIAIHIKLVTNRPLQAFPCS*KDSASL Trigger: GAGGGAAGCAGAATCCTTCAAGGAACAAGGGAATGC...TTGGAGGGGTCTATTTGTCACTAATTTTATGTGTATTGCTATGAGAGTATCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154972.9 ENSMUST00000239479.2 |
||
| CDS CCA 72 bp | GGGCCAGAGCGGCCTTCCATCCCTGGAGGTCCACGGTaGTCTCCGCGCTGGGGCGGGGGCCCAGGGACGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GPERPSIPGGPR*SPRWGGGPGTV Trigger: AACCGTCCCTGGGCCCCCGCCCCAGCGCGGAGACCACCGTGGACCTCCAGGGATGGAAGGCCGCTCTGGCCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239410.2 |
||
| CDS CAA 90 bp | CCCAGAGGGACTCCCTCGAGCCCGTCTACCAACGAGAGGCTCCGCTaGGGGCCAGAGCGGCCTTCCATCCCTGGAGGTCCACGGTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PRGTPSSPSTNERLR*GPERPSIPGGPRWS Trigger: AGACCACCGTGGACCTCCAGGGATGGAAGGCCGCTCTGGCCCCAAGCGGAGCCTCTCGTTGGTAGACGGGCTCGAGGGAGTCCCTCTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239410.2 |
||
| CDS CCA 72 bp | CTCCCTCGAGCCCGTCTACCAACGAGAGGCTCCGCTTaGGGCCAGAGCGGCCTTCCATCCCTGGAGGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LPRARLPTRGSA*GQSGLPSLEVH Trigger: GTGGACCTCCAGGGATGGAAGGCCGCTCTGGCCCCAAGCGGAGCCTCTCGTTGGTAGACGGGCTCGAGGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239410.2 |
||
| CDS TCA 72 bp | CCGCGCTGGGGCGGGGGCCCAGGGACGGTTCCTTCCTaGCTTTGCAGTGTGTCCACAGCTTCCTCCCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PRWGGGPGTVPS*LCSVSTASSLE Trigger: TTCCAGGGAGGAAGCTGTGGACACACTGCAAAGTCAGGAAGGAACCGTCCCTGGGCCCCCGCCCCAGCGCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239410.2 |
||
| CDS CAA 72 bp | ACTCCCTCGAGCCCGTCTACCAACGAGAGGCTCCGCTaGGGGCCAGAGCGGCCTTCCATCCCTGGAGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TPSSPSTNERLR*GPERPSIPGGP Trigger: TGGACCTCCAGGGATGGAAGGCCGCTCTGGCCCCAAGCGGAGCCTCTCGTTGGTAGACGGGCTCGAGGGAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239410.2 |
||
| CDS CCA 72 bp | CTACGACATGCCGCCATTGCATTCCCAAGTGAGAGGTaGCACTTGCCTTCTCGGAGGTGTCCCCGGACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LRHAAIAFPSER*HLPSRRCPRTK Trigger: TTTTGTCCGGGGACACCTCCGAGAAGGCAAGTGCCACCTCTCACTTGGGAATGCAATGGCGGCATGTCGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000014339.15 ENSMUST00000132886.3 ENSMUST00000137688.9 ENSMUST00000146840.3 ENSMUST00000154972.9 ENSMUST00000239389.2 ENSMUST00000239410.2 ENSMUST00000239418.2 ENSMUST00000239490.2 |
||
| CDS CCA 72 bp | CTACGACATGCCGCCATTGCATTCCCAAGTGAGAGGTaGCACTTGCCTTCTCGGAGGTGTCCCTCACAGACT | + |
|
Preference number: 6 (lower is better) Translates to: LRHAAIAFPSER*HLPSRRCPSQT Trigger: AGTCTGTGAGGGACACCTCCGAGAAGGCAAGTGCCACCTCTCACTTGGGAATGCAATGGCGGCATGTCGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000239479.2 ENSMUST00000239499.2 |
||
| CDS TCA 72 bp | AGGCCAGCACTGTCCAGTGAGGTGCATTTCCAGACTTaGAACCCTATCTCCTGCTGTGCCTGGGCATTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: RPALSSEVHFQT*NPISCCAWAFL Trigger: TAAAAATGCCCAGGCACAGCAGGAGATAGGGTTTCAAGTCTGGAAATGCACCTCACTGGACAGTGCTGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154972.9 |
||
| CDS CAA 72 bp | TTCGTTGTAGTCCTTCTTAGCATAATATGCATTCCCTaGTTCCTTGAAGGATTCTGCTTCCCTGGACCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FVVVLLSIICIP*FLEGFCFPGPP Trigger: CGGCGGTCCAGGGAAGCAGAATCCTTCAAGGAACAAGGGAATGCATATTATGCTAAGAAGGACTACAACGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146840.3 |
||
| CDS CAA 72 bp | TCCACTTCTGCTATTTTCTCATACTCCATGACGGCATaGGCGTTCTTGAACCGGACAAAACTGTCATCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: STSAIFSYSMTA*AFLNRTKLSSN Trigger: GTTGGATGACAGTTTTGTCCGGTTCAAGAACGCCAATGCCGTCATGGAGTATGAGAAAATAGCAGAAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155152.9 |
||
| CDS CAA 72 bp | TTCGTTGTAGTCCTTCTTAGCATAATATGCATTCCCTaGTTCCTTGAAGGATTCTGCTTCCCTCTTGGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: FVVVLLSIICIP*FLEGFCFPLGV Trigger: GACGCCAAGAGGGAAGCAGAATCCTTCAAGGAACAAGGGAATGCATATTATGCTAAGAAGGACTACAACGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000014339.15 ENSMUST00000132886.3 ENSMUST00000137688.9 ENSMUST00000154972.9 ENSMUST00000155152.9 ENSMUST00000239410.2 ENSMUST00000239418.2 ENSMUST00000239479.2 ENSMUST00000239499.2 |
||