Pregenerated sensors for DNAJC5G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053856Ensembl transcript IDs: ENSMUST00000066544.5, ENSMUST00000201740.4, ENSMUST00000202433.4, ENSMUST00000202760.4
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCAGGGGCCTACTGGACATTGACCCAGGTACCCACTGGAGAAAGCTaGACCCACTCAGCAAACAGCTGCCAACACGTCTTGAGAGCGCAT | + |
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Preference number: 1 (lower is better) Translates to: SGAYWTLTQVPTGES*THSANSCQHVLRAH Trigger: ATGCGCTCTCAAGACGTGTTGGCAGCTGTTTGCTGAGTGGGTGCAGCTTTCTCCAGTGGGTACCTGGGTCAATGTCCAGTAGGCCCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR CCA 90 bp | GAGTGTAGAGACAGGGCTACTTTCTTCCTTCTTCAATGTATCCAGTaGGCTGAGTGTCGGGGACTCTTGCTGGGCCAGCACCCCATTCCT | + |
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Preference number: 1 (lower is better) Translates to: ECRDRATFFLLQCIQ*AECRGLLLGQHPIP Trigger: AGGAATGGGGTGCTGGCCCAGCAAGAGTCCCCGACACTCAGCCCACTGGATACATTGAAGAAGGAAGAAAGTAGCCCTGTCTCTACACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR GCA 90 bp | ACCCAGGTACCCACTGGAGAAAGCTGCACCCACTCAGCAAACAGCTaGCAACACGTCTTGAGAGCGCATGTGGATAAAGACAGGAATGGA | + |
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Preference number: 1 (lower is better) Translates to: TQVPTGESCTHSANS*QHVLRAHVDKDRNG Trigger: TCCATTCCTGTCTTTATCCACATGCGCTCTCAAGACGTGTTGGCAGCTGTTTGCTGAGTGGGTGCAGCTTTCTCCAGTGGGTACCTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR TCA 90 bp | ATCCTGGTGAACTTGTTAGTAAGTGCTCAGGGGCCTACTGGACATTaGCCCAGGTACCCACTGGAGAAAGCTGCACCCACTCAGCAAACA | + |
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Preference number: 1 (lower is better) Translates to: ILVNLLVSAQGPTGH*PRYPLEKAAPTQQT Trigger: TGTTTGCTGAGTGGGTGCAGCTTTCTCCAGTGGGTACCTGGGTCAATGTCCAGTAGGCCCCTGAGCACTTACTAACAAGTTCACCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR CCA 90 bp | AGGAATGGAGTCAGAGCTAAACAGAAAAGCAGCTGGAAGGTTCTTTaGGGACAGGCTTTGTGTCACTGTGGAGGGCAGAGATGTCCTTAC | + |
|
Preference number: 1 (lower is better) Translates to: RNGVRAKQKSSWKVL*GQALCHCGGQRCPY Trigger: GTAAGGACATCTCTGCCCTCCACAGTGACACAAAGCCTGTCCCCAAAGAACCTTCCAGCTGCTTTTCTGTTTAGCTCTGACTCCATTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR GCA 90 bp | TGGTGTAGGAACCAGAAGATGGTGAGACCAGTCTTCCAAAGGTGTTaGAAAGAAATGAAGCTGGTGCTAAAAGTTCTTGGTACACAGTGT | + |
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Preference number: 1 (lower is better) Translates to: WCRNQKMVRPVFQRC*KEMKLVLKVLGTQC Trigger: ACACTGTGTACCAAGAACTTTTAGCACCAGCTTCATTTCTTTGCAACACCTTTGGAAGACTGGTCTCACCATCTTCTGGTTCCTACACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| 3UTR CCA 90 bp | CTTCCAAAGGTGTTGCAAAGAAATGAAGCTGGTGCTAAAAGTTCTTaGTACACAGTGTTCCAACGAAGGAGGACTAATTGGTGCAACAGC | + |
|
Preference number: 1 (lower is better) Translates to: LPKVLQRNEAGAKSS*YTVFQRRRTNWCNS Trigger: GCTGTTGCACCAATTAGTCCTCCTTCGTTGGAACACTGTGTACCAAGAACTTTTAGCACCAGCTTCATTTCTTTGCAACACCTTTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| 3UTR CCA 90 bp | TCCTTAGCCTTTTTCCCAGTGAATAGAGAGAGGTTTGATGGTTCCTaGGCCCTGATACCACATAGTAAGAAAGAAACAATAAAGCGGGAT | + |
|
Preference number: 1 (lower is better) Translates to: SLAFFPVNRERFDGS*ALIPHSKKETIKRD Trigger: ATCCCGCTTTATTGTTTCTTTCTTACTATGTGGTATCAGGGCCCAGGAACCATCAAACCTCTCTCTATTCACTGGGAAAAAGGCTAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| 3UTR-3UTR TCA 90 bp | TGCTCAGGGGCCTACTGGACATTGACCCAGGTACCCACTGGAGAAAGCTGCACCGGGCCTACTGGACATTaGCCCAGGTACCCACTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: CSGAYWTLTQVPTGESCTGPTGH*PRYPLE Trigger: CTCCAGTGGGTACCTGGGTCAATGTCCAGTAGGCCC...GGTGCAGCTTTCTCCAGTGGGTACCTGGGTCAATGTCCAGTAGGCCCCTGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR-3UTR GCA 90 bp | GAAAAGCAGCTGGAAGGTTCTTTGGGGACAGGCTTTGTGTCACTGTGGAGGGCAAGTGTCGGGGACTCTTaGTGGGCCAGCACCCCATTC | + |
|
Preference number: 2 (lower is better) Translates to: EKQLEGSLGTGFVSLWRASVGDS*WASTPF Trigger: GAATGGGGTGCTGGCCCAGCAAGAGTCCCCGACACT...TGCCCTCCACAGTGACACAAAGCCTGTCCCCAAAGAACCTTCCAGCTGCTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR CAA 90 bp | GATCCTGGTGAACTTGTTAGTAAGTGCTCAGGGGCCTACTGGACATaGACCCAGGTACCCACTGGAGAAAGCTGCACCCACTCAGCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: DPGELVSKCSGAYWT*TQVPTGESCTHSAN Trigger: GTTTGCTGAGTGGGTGCAGCTTTCTCCAGTGGGTACCTGGGTCAATGTCCAGTAGGCCCCTGAGCACTTACTAACAAGTTCACCAGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGGTGAGTGTAGAGACAGGGCTACTTTCTTCCTTCTTCAATGTATCCAGTGGAGTGTCGGGGACTCTTaGTGGGCCAGCACCCCATTC | + |
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Preference number: 2 (lower is better) Translates to: LGECRDRATFFLLQCIQWSVGDS*WASTPF Trigger: GAATGGGGTGCTGGCCCAGCAAGAGTCCCCGACACT...CCACTGGATACATTGAAGAAGGAAGAAAGTAGCCCTGTCTCTACACTCACCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR-3UTR GCA 90 bp | GAGTGTAGAGACAGGGCTACTTTCTTCCTTCTTCAATGTATCCAGTGGGCTGAGAGTGTCGGGGACTCTTaGTGGGCCAGCACCCCATTC | + |
|
Preference number: 2 (lower is better) Translates to: ECRDRATFFLLQCIQWAESVGDS*WASTPF Trigger: GAATGGGGTGCTGGCCCAGCAAGAGTCCCCGACACT...CTCAGCCCACTGGATACATTGAAGAAGGAAGAAAGTAGCCCTGTCTCTACACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR-3UTR TCA 90 bp | TGCTCAGGGGCCTACTGGACATTGACCCAGGTACCCACTGGAGAAAGCTGCACCTGTCATCATAGCTTCTaGAGCAGCAGGGATTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: CSGAYWTLTQVPTGESCTCHHSF*SSRDFF Trigger: AAAGAAATCCCTGCTGCTTCAGAAGCTATGATGACA...GGTGCAGCTTTCTCCAGTGGGTACCTGGGTCAATGTCCAGTAGGCCCCTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR CAA 90 bp | TTCTTCCTTCTTCAATGTATCCAGTGGGCTGAGTGTCGGGGACTCTaGCTGGGCCAGCACCCCATTCCTCTTCACGTTTCCTTAATTATT | + |
|
Preference number: 2 (lower is better) Translates to: FFLLQCIQWAECRGL*LGQHPIPLHVSLII Trigger: AATAATTAAGGAAACGTGAAGAGGAATGGGGTGCTGGCCCAGCAAGAGTCCCCGACACTCAGCCCACTGGATACATTGAAGAAGGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR-3UTR GCA 90 bp | TGTGTCACTGTGGAGGGCAGAGATGTCCTTACGAGGATGGGTGTCATCATAGCTCACGTCTTAATCCTCTaGTTCAATATCTTGTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: CVTVEGRDVLTRMGVIIAHVLIL*FNILCS Trigger: AGAACACAAGATATTGAAGCAGAGGATTAAGACGTG...AGCTATGATGACACCCATCCTCGTAAGGACATCTCTGCCCTCCACAGTGACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR-3UTR CAA 90 bp | TTGGGGACAGGCTTTGTGTCACTGTGGAGGGCAGAGATGTCCTTACGAGGATGGCTTTGGGGACAGGCTTaGTGTCACTGTGGAGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LGTGFVSLWRAEMSLRGWLWGQA*CHCGGQ Trigger: CTGCCCTCCACAGTGACACAAAGCCTGTCCCCAAAG...CCATCCTCGTAAGGACATCTCTGCCCTCCACAGTGACACAAAGCCTGTCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR GCA 72 bp | TTCAATGTATCCAGTGGGCTGAGTGTCGGGGACTCTTaGTGGGCCAGCACCCCATTCCTCTTCACGTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FNVSSGLSVGDS*WASTPFLFTFP Trigger: AGGAAACGTGAAGAGGAATGGGGTGCTGGCCCAGCAAGAGTCCCCGACACTCAGCCCACTGGATACATTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR CCA 72 bp | GACAGGGCTACTTTCTTCCTTCTTCAATGTATCCAGTaGGCTGAGTGTCGGGGACTCTTGCTGGGCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: DRATFFLLQCIQ*AECRGLLLGQH Trigger: GTGCTGGCCCAGCAAGAGTCCCCGACACTCAGCCCACTGGATACATTGAAGAAGGAAGAAAGTAGCCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR-3UTR CAA 90 bp | ACAGAAAAGCAGCTGGAAGGTTCTTTGGGGACAGGCTTTGTGTCACTGTGGAGGCTTTGGGGACAGGCTTaGTGTCACTGTGGAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TEKQLEGSLGTGFVSLWRLWGQA*CHCGGQ Trigger: CTGCCCTCCACAGTGACACAAAGCCTGTCCCCAAAG...CCTCCACAGTGACACAAAGCCTGTCCCCAAAGAACCTTCCAGCTGCTTTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR GCA 72 bp | CCCACTGGAGAAAGCTGCACCCACTCAGCAAACAGCTaGCAACACGTCTTGAGAGCGCATGTGGATAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PTGESCTHSANS*QHVLRAHVDKD Trigger: GTCTTTATCCACATGCGCTCTCAAGACGTGTTGGCAGCTGTTTGCTGAGTGGGTGCAGCTTTCTCCAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR GCA 72 bp | TACTGGACATTGACCCAGGTACCCACTGGAGAAAGCTaGACCCACTCAGCAAACAGCTGCCAACACGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: YWTLTQVPTGES*THSANSCQHVL Trigger: CAAGACGTGTTGGCAGCTGTTTGCTGAGTGGGTGCAGCTTTCTCCAGTGGGTACCTGGGTCAATGTCCAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR CCA 72 bp | CTGGAAGGTTCTTTGGGGACAGGCTTTGTGTCACTGTaGAGGGCAGAGATGTCCTTACGAGGATGGGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: LEGSLGTGFVSL*RAEMSLRGWVS Trigger: TGACACCCATCCTCGTAAGGACATCTCTGCCCTCCACAGTGACACAAAGCCTGTCCCCAAAGAACCTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR CCA 72 bp | CCTGGTGAACTTGTTAGTAAGTGCTCAGGGGCCTACTaGACATTGACCCAGGTACCCACTGGAGAAAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: PGELVSKCSGAY*TLTQVPTGESC Trigger: GCAGCTTTCTCCAGTGGGTACCTGGGTCAATGTCCAGTAGGCCCCTGAGCACTTACTAACAAGTTCACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR TCA 72 bp | GCTGCACCCACTCAGCAAACAGCTGCCAACACGTCTTaGGAGCGCATGTGGATAAAGACAGGAATGGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: AAPTQQTAANTS*ERMWIKTGMES Trigger: TGACTCCATTCCTGTCTTTATCCACATGCGCTCTCAAGACGTGTTGGCAGCTGTTTGCTGAGTGGGTGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR TCA 72 bp | AACTTGTTAGTAAGTGCTCAGGGGCCTACTGGACATTaGCCCAGGTACCCACTGGAGAAAGCTGCACCCACT | + |
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Preference number: 3 (lower is better) Translates to: NLLVSAQGPTGH*PRYPLEKAAPT Trigger: AGTGGGTGCAGCTTTCTCCAGTGGGTACCTGGGTCAATGTCCAGTAGGCCCCTGAGCACTTACTAACAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR-3UTR CAA 90 bp | ACAGAAAAGCAGCTGGAAGGTTCTTTGGGGACAGGCTTTGTGTCACTGTGGAGGCAGCTGGAAGGTTCTTaGGGGACAGGCTTTGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: TEKQLEGSLGTGFVSLWRQLEGS*GTGFVS Trigger: TGACACAAAGCCTGTCCCCAAAGAACCTTCCAGCTG...CCTCCACAGTGACACAAAGCCTGTCCCCAAAGAACCTTCCAGCTGCTTTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR GCA 72 bp | TTTGGTGATCAGGATCCTGGTGAACTTGTTAGTAAGTaGTCAGGGGCCTACTGGACATTGACCCAGGTACCC | + |
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Preference number: 3 (lower is better) Translates to: FGDQDPGELVSK*SGAYWTLTQVP Trigger: GGGTACCTGGGTCAATGTCCAGTAGGCCCCTGAGCACTTACTAACAAGTTCACCAGGATCCTGATCACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR CCA 72 bp | GTCAGAGCTAAACAGAAAAGCAGCTGGAAGGTTCTTTaGGGACAGGCTTTGTGTCACTGTGGAGGGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VRAKQKSSWKVL*GQALCHCGGQR Trigger: TCTCTGCCCTCCACAGTGACACAAAGCCTGTCCCCAAAGAACCTTCCAGCTGCTTTTCTGTTTAGCTCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR CCA 72 bp | TCTTGGTACACAGTGTTCCAACGAAGGAGGACTAATTaGTGCAACAGCTCCTGGGATGGGAGCCACCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: SWYTVFQRRRTN*CNSSWDGSHLV Trigger: AACAAGGTGGCTCCCATCCCAGGAGCTGTTGCACCAATTAGTCCTCCTTCGTTGGAACACTGTGTACCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| 3UTR CCA 72 bp | GACAGGAATGGAGTCAGAGCTAAACAGAAAAGCAGCTaGAAGGTTCTTTGGGGACAGGCTTTGTGTCACTGT | + |
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Preference number: 3 (lower is better) Translates to: DRNGVRAKQKSS*KVLWGQALCHC Trigger: ACAGTGACACAAAGCCTGTCCCCAAAGAACCTTCCAGCTGCTTTTCTGTTTAGCTCTGACTCCATTCCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR-3UTR CAA 90 bp | AGGTTCTTTGGGGACAGGCTTTGTGTCACTGTGGAGGGCAGAGATGTCCTTACGCAATATCTTGTGTTCTaGATCTTGAAGGCTGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: RFFGDRLCVTVEGRDVLTQYLVF*ILKAEK Trigger: CTTCTCAGCCTTCAAGATCAAGAACACAAGATATTG...CGTAAGGACATCTCTGCCCTCCACAGTGACACAAAGCCTGTCCCCAAAGAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR-3UTR CAA 90 bp | CGGGGACTCTTGCTGGGCCAGCACCCCATTCCTCTTCACGTTTCCTTAATTATTCTTGTGTTCTTGATCTaGAAGGCTGAGAAGAAACAT | + |
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Preference number: 3 (lower is better) Translates to: RGLLLGQHPIPLHVSLIILVFLI*KAEKKH Trigger: ATGTTTCTTCTCAGCCTTCAAGATCAAGAACACAAG...AATAATTAAGGAAACGTGAAGAGGAATGGGGTGCTGGCCCAGCAAGAGTCCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR TCA 72 bp | ATAAGATCTAAGGGGATCACTCTGTGTGAAGTAACATaGGGGACAGAGGCAGTAAGATTGGAGCATGGACTG | + |
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Preference number: 3 (lower is better) Translates to: IRSKGITLCEVT*GTEAVRLEHGL Trigger: CAGTCCATGCTCCAATCTTACTGCCTCTGTCCCTCATGTTACTTCACACAGAGTGATCCCCTTAGATCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| 3UTR CCA 72 bp | GCAGCAGGGATTTCTTTTAAGAACAGGAGTCAAATCTaGGTGAGTGTAGAGACAGGGCTACTTTCTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: AAGISFKNRSQI*VSVETGLLSSF Trigger: GAAGGAAGAAAGTAGCCCTGTCTCTACACTCACCCAGATTTGACTCCTGTTCTTAAAAGAAATCCCTGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR GCA 72 bp | AACCAGAAGATGGTGAGACCAGTCTTCCAAAGGTGTTaGAAAGAAATGAAGCTGGTGCTAAAAGTTCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: NQKMVRPVFQRC*KEMKLVLKVLG Trigger: ACCAAGAACTTTTAGCACCAGCTTCATTTCTTTGCAACACCTTTGGAAGACTGGTCTCACCATCTTCTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| 3UTR CCA 72 bp | GTGTTGCAAAGAAATGAAGCTGGTGCTAAAAGTTCTTaGTACACAGTGTTCCAACGAAGGAGGACTAATTGG | + |
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Preference number: 3 (lower is better) Translates to: VLQRNEAGAKSS*YTVFQRRRTNW Trigger: CCAATTAGTCCTCCTTCGTTGGAACACTGTGTACCAAGAACTTTTAGCACCAGCTTCATTTCTTTGCAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| 3UTR-3UTR CAA 90 bp | TTTAAGAACAGGAGTCAAATCTGGGTGAGTGTAGAGACAGGGCTACTTTCTTCCCTTGTGTTCTTGATCTaGAAGGCTGAGAAGAAACAT | + |
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Preference number: 3 (lower is better) Translates to: FKNRSQIWVSVETGLLSSLVFLI*KAEKKH Trigger: ATGTTTCTTCTCAGCCTTCAAGATCAAGAACACAAG...GGAAGAAAGTAGCCCTGTCTCTACACTCACCCAGATTTGACTCCTGTTCTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR-3UTR CAA 90 bp | GAGTCAAATCTGGGTGAGTGTAGAGACAGGGCTACTTTCTTCCTTCTTCAATGTCAATATCTTGTGTTCTaGATCTTGAAGGCTGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: ESNLGECRDRATFFLLQCQYLVF*ILKAEK Trigger: CTTCTCAGCCTTCAAGATCAAGAACACAAGATATTG...ACATTGAAGAAGGAAGAAAGTAGCCCTGTCTCTACACTCACCCAGATTTGACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR CAA 72 bp | CTTCAATGTATCCAGTGGGCTGAGTGTCGGGGACTCTaGCTGGGCCAGCACCCCATTCCTCTTCACGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LQCIQWAECRGL*LGQHPIPLHVS Trigger: GGAAACGTGAAGAGGAATGGGGTGCTGGCCCAGCAAGAGTCCCCGACACTCAGCCCACTGGATACATTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 ENSMUST00000202760.4 |
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| 3UTR CAA 72 bp | GAACTTGTTAGTAAGTGCTCAGGGGCCTACTGGACATaGACCCAGGTACCCACTGGAGAAAGCTGCACCCAC | + |
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Preference number: 4 (lower is better) Translates to: ELVSKCSGAYWT*TQVPTGESCTH Trigger: GTGGGTGCAGCTTTCTCCAGTGGGTACCTGGGTCAATGTCCAGTAGGCCCCTGAGCACTTACTAACAAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR CAA 72 bp | AGCTGCACCCACTCAGCAAACAGCTGCCAACACGTCTaGAGAGCGCATGTGGATAAAGACAGGAATGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SCTHSANSCQHV*RAHVDKDRNGV Trigger: GACTCCATTCCTGTCTTTATCCACATGCGCTCTCAAGACGTGTTGGCAGCTGTTTGCTGAGTGGGTGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000202433.4 |
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| 3UTR CAA 72 bp | TTGGTGCAACAGCTCCTGGGATGGGAGCCACCTTGTTaGGTGATCAGGATCCTGGTGAACTTGTTAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVQQLLGWEPPC*VIRILVNLLVS Trigger: ACTTACTAACAAGTTCACCAGGATCCTGATCACCAAACAAGGTGGCTCCCATCCCAGGAGCTGTTGCACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| 3UTR CAA 72 bp | CTAATTGGTGCAACAGCTCCTGGGATGGGAGCCACCTaGTTTGGTGATCAGGATCCTGGTGAACTTGTTAGT | + |
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Preference number: 4 (lower is better) Translates to: LIGATAPGMGAT*FGDQDPGELVS Trigger: ACTAACAAGTTCACCAGGATCCTGATCACCAAACAAGGTGGCTCCCATCCCAGGAGCTGTTGCACCAATTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| CDS-3UTR CCA 90 bp | GGGACTCTTGCTGGGCCAGCACCCCATTCCTCTTCACGTTTCCTTAATTATTGTTCGGTGAGTATGGCATaGGCTGTGTTGATCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: GTLAGPAPHSSSRFLNYCSVSMA*AVLISL Trigger: CAAAGAGATCAACACAGCCCATGCCATACTCACCGA...ACAATAATTAAGGAAACGTGAAGAGGAATGGGGTGCTGGCCCAGCAAGAGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| CDS-3UTR CCA 90 bp | AACATGAGGGACAGAGGCAGTAAGATTGGAGCATGGACTGCAGCCTGTCCACAGGAAGAAACATTCATTTaGCGATTCTCTTCCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: NMRDRGSKIGAWTAACPQEETFI*RFSSSS Trigger: GGAAGAGGAAGAGAATCGCCAAATGAATGTTTCTTC...CTGTGGACAGGCTGCAGTCCATGCTCCAATCTTACTGCCTCTGTCCCTCATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| CDS-3UTR CCA 90 bp | CAGAAAAGCAGCTGGAAGGTTCTTTGGGGACAGGCTTTGTGTCACTGTGGAGGGCCTTCTTCACCAAAATaGTCATACAGGTATAATCCT | + |
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Preference number: 4 (lower is better) Translates to: QKSSWKVLWGQALCHCGGPSSPK*SYRYNP Trigger: AGGATTATACCTGTATGACCATTTTGGTGAAGAAGG...CCCTCCACAGTGACACAAAGCCTGTCCCCAAAGAACCTTCCAGCTGCTTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| CDS CCA 90 bp | GAGTGTAGAGACAGGGCTACTTTCTTCCTTCTTCAATGTATCCAGTaGGCTGAGTGTCGGGGACTCTTGCTGGGCCAGCACCTTGAACCA | + |
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Preference number: 5 (lower is better) Translates to: ECRDRATFFLLQCIQ*AECRGLLLGQHLEP Trigger: TGGTTCAAGGTGCTGGCCCAGCAAGAGTCCCCGACACTCAGCCCACTGGATACATTGAAGAAGGAAGAAAGTAGCCCTGTCTCTACACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201740.4 |
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| CDS-3UTR CAA 90 bp | TTCAATGTATCCAGTGGGCTGAGTGTCGGGGACTCTTGCTGGGCCAGCACCCCAAGGATAACAAGTGTCTaGAACCAACAACTGTTCACT | + |
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Preference number: 5 (lower is better) Translates to: FNVSSGLSVGDSCWASTPRITSV*NQQLFT Trigger: AGTGAACAGTTGTTGGTTCAAGACACTTGTTATCCT...TGGGGTGCTGGCCCAGCAAGAGTCCCCGACACTCAGCCCACTGGATACATTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| CDS-3UTR CAA 90 bp | TCTTCCTTCTTCAATGTATCCAGTGGGCTGAGTGTCGGGGACTCTTGCTGGGCCAGAAGAAACATTCATTaGGCGATTCTCTTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SSFFNVSSGLSVGDSCWARRNIH*AILFLF Trigger: GAAGAGGAAGAGAATCGCCAAATGAATGTTTCTTCT...GGCCCAGCAAGAGTCCCCGACACTCAGCCCACTGGATACATTGAAGAAGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| CDS-3UTR CAA 90 bp | CAGCTGGAAGGTTCTTTGGGGACAGGCTTTGTGTCACTGTGGAGGGCAGAGATGCAATATCTTGTGTTCTaGATCTTGAAGGCTGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: QLEGSLGTGFVSLWRAEMQYLVF*ILKAEK Trigger: CTTCTCAGCCTTCAAGATCAAGAACACAAGATATTG...CATCTCTGCCCTCCACAGTGACACAAAGCCTGTCCCCAAAGAACCTTCCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| CDS-3UTR CAA 90 bp | AATCTGGGTGAGTGTAGAGACAGGGCTACTTTCTTCCTTCTTCAATGTATCCAGCTTGTCTGGATGATATaGCAAGGCCAGTTTCCTGTA | + |
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Preference number: 5 (lower is better) Translates to: NLGECRDRATFFLLQCIQLVWMI*QGQFPV Trigger: TACAGGAAACTGGCCTTGCAATATCATCCAGACAAG...CTGGATACATTGAAGAAGGAAGAAAGTAGCCCTGTCTCTACACTCACCCAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| CDS-3UTR CAA 90 bp | GAGTCAAATCTGGGTGAGTGTAGAGACAGGGCTACTTTCTTCCTTCTTCAATGTCTTGTGTTCTTGATCTaGAAGGCTGAGAAGAAACAT | + |
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Preference number: 5 (lower is better) Translates to: ESNLGECRDRATFFLLQCLVFLI*KAEKKH Trigger: ATGTTTCTTCTCAGCCTTCAAGATCAAGAACACAAG...ACATTGAAGAAGGAAGAAAGTAGCCCTGTCTCTACACTCACCCAGATTTGACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| CDS-3UTR CAA 90 bp | TTCCAAAGGTGTTGCAAAGAAATGAAGCTGGTGCTAAAAGTTCTTGGTACACAGATGGCATGGGCTGTGTaGATCTCTTTGAAGATTTCT | + |
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Preference number: 5 (lower is better) Translates to: FQRCCKEMKLVLKVLGTQMAWAV*ISLKIS Trigger: AGAAATCTTCAAAGAGATCAACACAGCCCATGCCAT...CTGTGTACCAAGAACTTTTAGCACCAGCTTCATTTCTTTGCAACACCTTTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066544.5 |
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| CDS CAA 72 bp | CTTCAATGTATCCAGTGGGCTGAGTGTCGGGGACTCTaGCTGGGCCAGCACCTTGAACCAACAACTGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: LQCIQWAECRGL*LGQHLEPTTVH Trigger: GTGAACAGTTGTTGGTTCAAGGTGCTGGCCCAGCAAGAGTCCCCGACACTCAGCCCACTGGATACATTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201740.4 |
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| CDS CAA 90 bp | TTCTTCCTTCTTCAATGTATCCAGTGGGCTGAGTGTCGGGGACTCTaGCTGGGCCAGCACCTTGAACCAACAACTGTTCACTATAAAATA | + |
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Preference number: 6 (lower is better) Translates to: FFLLQCIQWAECRGL*LGQHLEPTTVHYKI Trigger: TATTTTATAGTGAACAGTTGTTGGTTCAAGGTGCTGGCCCAGCAAGAGTCCCCGACACTCAGCCCACTGGATACATTGAAGAAGGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201740.4 |
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| CDS CAA 72 bp | GGGTCGGTGAGTATGGCATGGGCTGTGTTGATCTCTTaGAAGATTTCTGCTGCTAAAGGGTTATCTGGATTC | + |
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Preference number: 6 (lower is better) Translates to: GSVSMAWAVLIS*KISAAKGLSGF Trigger: GAATCCAGATAACCCTTTAGCAGCAGAAATCTTCAAAGAGATCAACACAGCCCATGCCATACTCACCGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066544.5 ENSMUST00000201740.4 |
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