Pregenerated sensors for DNAJC5B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027606Ensembl transcript IDs: ENSMUST00000029132.11, ENSMUST00000118735.8, ENSMUST00000118968.8, ENSMUST00000165693.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATaGCTGAACCAAAAAGAGGAGCTGTGGACCCTCCACGGGCCAACA | + |
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Preference number: 1 (lower is better) Translates to: HSISCLHFPDDHPET*LNQKEELWTLHGPT Trigger: TGTTGGCCCGTGGAGGGTCCACAGCTCCTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| 3UTR TCA 72 bp | GTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTaGACCAAAAAGAGGAGCTGTGGACCCTCCACGGGC | + |
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Preference number: 3 (lower is better) Translates to: VCTSPMTTQRHG*TKKRSCGPSTG Trigger: GCCCGTGGAGGGTCCACAGCTCCTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| 3UTR CCA 72 bp | TCATGTTTGCACTTCCCCGATGACCACCCAGAGACATaGCTGAACCAAAAAGAGGAGCTGTGGACCCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: SCLHFPDDHPET*LNQKEELWTLH Trigger: GTGGAGGGTCCACAGCTCCTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| 3UTR TCA 72 bp | ATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATaGCCACCCAGAGACATGGCTGAACCAAAAAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: ICSQHFMFALPR*PPRDMAEPKRG Trigger: TCCTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR GCA 90 bp | GTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGGTCCACAACAACAGTTaGAGCAGCAGCAAAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VHSISCLHFPDDHPETWLVHNNS*SSSKGS Trigger: GCTGCCTTTGCTGCTGCTGCAACTGTTGTTGTGGAC...CAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR TCA 90 bp | ATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTCTTTGAGGTGTCGGTaGGGATTGTGTGGGCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MFTAFHVCTSPMTTQRHGSLRCR*GLCGRC Trigger: ACAACGCCCACACAATCCTCACCGACACCTCAAAGA...GCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR TCA 90 bp | TCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAAAAAGAGTCTTTGAGGTGTCGGTaGGGATTGTGTGGGCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: SCLHFPDDHPETWLNQKESLRCR*GLCGRC Trigger: ACAACGCCCACACAATCCTCACCGACACCTCAAAGA...CTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR TCA 90 bp | AGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAATCTTTGAGGTGTCGGTaGGGATTGTGTGGGCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: SISCLHFPDDHPETWLNQSLRCR*GLCGRC Trigger: ACAACGCCCACACAATCCTCACCGACACCTCAAAGA...TTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | ATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCAAAGTCCGCTGTCTTTaGTTGGGTGCGTTACATGCC | + |
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Preference number: 4 (lower is better) Translates to: MFTAFHVCTSPMTTQRHGKVRCL*LGALHA Trigger: GGCATGTAACGCACCCAACCAAAGACAGCGGACTTT...GCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | TCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAAAAAGAGAAAGTCCGCTGTCTTTaGTTGGGTGCGTTACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCLHFPDDHPETWLNQKEKVRCL*LGALHA Trigger: GGCATGTAACGCACCCAACCAAAGACAGCGGACTTT...CTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | GTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAGCAGATGGGTCATCTaGATTCTTGTCTGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VHSISCLHFPDDHPETWLSRWVI*ILVWMV Trigger: CACCATCCAGACAAGAATCCAGATGACCCATCTGCT...CAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | CACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACAGCAGATGGGTCATCTaGATTCTTGTCTGGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: HSISCLHFPDDHPETWLNSRWVI*ILVWMV Trigger: CACCATCCAGACAAGAATCCAGATGACCCATCTGCT...GTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | CACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCTTCTCAGCAGCAGATaGGTCATCTGGATTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: HSISCLHFPDDHPETWLNLLSSR*VIWILV Trigger: GACAAGAATCCAGATGACCCATCTGCTGCTGAGAAG...GTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | AGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAACTTCTCAGCAGCAGATaGGTCATCTGGATTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: SISCLHFPDDHPETWLNQLLSSR*VIWILV Trigger: GACAAGAATCCAGATGACCCATCTGCTGCTGAGAAG...TTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR TCA 90 bp | TCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAAAAAGAGCTTTGCCCACCAGCTTaGCAACATGAAGTATGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SCLHFPDDHPETWLNQKELCPPA*QHEVCV Trigger: AACACATACTTCATGTTGTCAAGCTGGTGGGCAAAG...CTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | ATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCGGATTCTTGTCTGGATaGTGTCGCAGGGCTAATTTT | + |
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Preference number: 4 (lower is better) Translates to: MFTAFHVCTSPMTTQRHGGFLSG*CRRANF Trigger: AAAATTAGCCCTGCGACACCATCCAGACAAGAATCC...GCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | TGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAAAAAGAGGAGTCGGTGAGGATTGTGTaGGCGTTGTTGATTTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: CLHFPDDHPETWLNQKEESVRIV*ALLISL Trigger: TAAAGAAATCAACAACGCCCACACAATCCTCACCGA...CTCCTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | CACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACAGGCTGGAGAACAACTaGAAAGTCCATATCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: HSISCLHFPDDHPETWLNRLENN*KVHIFL Trigger: GAGAAAGATATGGACTTTCCAGTTGTTCTCCAGCCT...GTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR GCA 90 bp | AAATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGTCCACAACAACAGTTaGAGCAGCAGCAAAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KCEYVHSISCLHFPDDHPVHNNS*SSSKGS Trigger: GCTGCCTTTGCTGCTGCTGCAACTGTTGTTGTGGAC...TGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | TGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGAGCAGATGGGTCATCTaGATTCTTGTCTGGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: CEYVHSISCLHFPDDHPESRWVI*ILVWMV Trigger: CACCATCCAGACAAGAATCCAGATGACCCATCTGCT...CTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | AGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAATCGGTGAGGATTGTGTaGGCGTTGTTGATTTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: SISCLHFPDDHPETWLNQSVRIV*ALLISL Trigger: TAAAGAAATCAACAACGCCCACACAATCCTCACCGA...TTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | TCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAAAAAGAGTCGGTGAGGATTGTGTaGGCGTTGTTGATTTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: SCLHFPDDHPETWLNQKESVRIV*ALLISL Trigger: TAAAGAAATCAACAACGCCCACACAATCCTCACCGA...CTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | TCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAAAAAGAGAGGCTGGAGAACAACTaGAAAGTCCATATCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SCLHFPDDHPETWLNQKERLENN*KVHIFL Trigger: GAGAAAGATATGGACTTTCCAGTTGTTCTCCAGCCT...CTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | TGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAAAAAGAGGAGTTTGTATTTGTAGGCTaGAGAACAACTGGAAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: CLHFPDDHPETWLNQKEEFVFVG*RTTGKS Trigger: GGACTTTCCAGTTGTTCTCCAGCCTACAAATACAAA...CTCCTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR TCA 90 bp | TCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAAAAAGAGATATATGTTTCTCTTTaGGGTGTCGGTGAGGATTGT | + |
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Preference number: 4 (lower is better) Translates to: SCLHFPDDHPETWLNQKEIYVSL*GVGEDC Trigger: ACAATCCTCACCGACACCTCAAAGAGAAACATATAT...CTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR TCA 90 bp | GTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACTTTGCCCACCAGCTTaGCAACATGAAGTATGTGTT | + |
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Preference number: 4 (lower is better) Translates to: VNMFTAFHVCTSPMTTQRLCPPA*QHEVCV Trigger: AACACATACTTCATGTTGTCAAGCTGGTGGGCAAAG...TCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR TCA 90 bp | TGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGCTTTGCCCACCAGCTTaGCAACATGAAGTATGTGTT | + |
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Preference number: 4 (lower is better) Translates to: CEYVHSISCLHFPDDHPELCPPA*QHEVCV Trigger: AACACATACTTCATGTTGTCAAGCTGGTGGGCAAAG...CTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR GCA 90 bp | TGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAAAAAGAGGAGCATGATGCTCCCTTATaGAGACCAAGAATTTCATAT | + |
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Preference number: 4 (lower is better) Translates to: CLHFPDDHPETWLNQKEEHDAPL*RPRISY Trigger: ATATGAAATTCTTGGTCTGCATAAGGGAGCATCATG...CTCCTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | ACAAATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCAAAGTCCGCTGTCTTTaGTTGGGTGCGTTACATGCC | + |
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Preference number: 4 (lower is better) Translates to: TNVNMFTAFHVCTSPMTTKVRCL*LGALHA Trigger: GGCATGTAACGCACCCAACCAAAGACAGCGGACTTT...GGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | AAATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAAAAGTCCGCTGTCTTTaGTTGGGTGCGTTACATGCC | + |
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Preference number: 4 (lower is better) Translates to: KCEYVHSISCLHFPDDHPKVRCL*LGALHA Trigger: GGCATGTAACGCACCCAACCAAAGACAGCGGACTTT...TGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | ACAAATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCTTCTCAGCAGCAGATaGGTCATCTGGATTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: TNVNMFTAFHVCTSPMTTLLSSR*VIWILV Trigger: GACAAGAATCCAGATGACCCATCTGCTGCTGAGAAG...GGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | TGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGTCGGTGAGGATTGTGTaGGCGTTGTTGATTTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: CEYVHSISCLHFPDDHPESVRIV*ALLISL Trigger: TAAAGAAATCAACAACGCCCACACAATCCTCACCGA...CTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | TGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGAGGCTGGAGAACAACTaGAAAGTCCATATCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: CEYVHSISCLHFPDDHPERLENN*KVHIFL Trigger: GAGAAAGATATGGACTTTCCAGTTGTTCTCCAGCCT...CTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR TCA 90 bp | AAATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCACTTTGCCCACCAGCTTaGCAACATGAAGTATGTGTT | + |
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Preference number: 4 (lower is better) Translates to: KCEYVHSISCLHFPDDHPLCPPA*QHEVCV Trigger: AACACATACTTCATGTTGTCAAGCTGGTGGGCAAAG...TGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | TGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGTTTGTATTTGTAGGCTaGAGAACAACTGGAAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: CEYVHSISCLHFPDDHPEFVFVG*RTTGKS Trigger: GGACTTTCCAGTTGTTCTCCAGCCTACAAATACAAA...CTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CCA 90 bp | GTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGATTTGTATTTGTAGGCTaGAGAACAACTGGAAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VNMFTAFHVCTSPMTTQRFVFVG*RTTGKS Trigger: GGACTTTCCAGTTGTTCTCCAGCCTACAAATACAAA...TCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR GCA 90 bp | AAATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCACATGATGCTCCCTTATaGAGACCAAGAATTTCATAT | + |
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Preference number: 4 (lower is better) Translates to: KCEYVHSISCLHFPDDHPHDAPL*RPRISY Trigger: ATATGAAATTCTTGGTCTGCATAAGGGAGCATCATG...TGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR TCA 90 bp | AAATACAAATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACATATATGTTTCTCTTTaGGGTGTCGGTGAGGATTGT | + |
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Preference number: 4 (lower is better) Translates to: KYKCEYVHSISCLHFPDDIYVSL*GVGEDC Trigger: ACAATCCTCACCGACACCTCAAAGAGAAACATATAT...GTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATTTGTATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR GCA 90 bp | AAATACAAATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCATGATGCTCCCTTATaGAGACCAAGAATTTCATAT | + |
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Preference number: 4 (lower is better) Translates to: KYKCEYVHSISCLHFPDDHDAPL*RPRISY Trigger: ATATGAAATTCTTGGTCTGCATAAGGGAGCATCATG...GTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATTTGTATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | TGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAAAAAGAGGAGGGGTCATCTGGATTCTaGTCTGGATGGTGTCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: CLHFPDDHPETWLNQKEEGSSGF*SGWCRR Trigger: CCTGCGACACCATCCAGACAAGAATCCAGATGACCC...CTCCTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | CACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACGGGTCATCTGGATTCTaGTCTGGATGGTGTCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: HSISCLHFPDDHPETWLNGSSGF*SGWCRR Trigger: CCTGCGACACCATCCAGACAAGAATCCAGATGACCC...GTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | CACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAAAGTCCGCTGTCTTaGGTTGGGTGCGTTACATGC | + |
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Preference number: 5 (lower is better) Translates to: HSISCLHFPDDHPETWLNQSPLS*VGCVTC Trigger: GCATGTAACGCACCCAACCAAAGACAGCGGACTTTG...GTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | ATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCCAAAGTCCGCTGTCTTaGGTTGGGTGCGTTACATGC | + |
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Preference number: 5 (lower is better) Translates to: MFTAFHVCTSPMTTQRHGQSPLS*VGCVTC Trigger: GCATGTAACGCACCCAACCAAAGACAGCGGACTTTG...GCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | AGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAACAAAGTCCGCTGTCTTaGGTTGGGTGCGTTACATGC | + |
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Preference number: 5 (lower is better) Translates to: SISCLHFPDDHPETWLNQQSPLS*VGCVTC Trigger: GCATGTAACGCACCCAACCAAAGACAGCGGACTTTG...TTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS GCA 90 bp | CTTCTGGTGTCGATGATTTGGGCCGACAATGTCCACAACAACAGTTaGAGCAGCAGCAAAGGCAGCAACAAAAATAGCAGCCGGTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: LLVSMIWADNVHNNS*SSSKGSNKNSSRSR Trigger: TCTTGACCGGCTGCTATTTTTGTTGCTGCCTTTGCTGCTGCTGCAACTGTTGTTGTGGACATTGTCGGCCCAAATCATCGACACCAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | AATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGGGGTCATCTGGATTCTaGTCTGGATGGTGTCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: NVNMFTAFHVCTSPMTTQGSSGF*SGWCRR Trigger: CCTGCGACACCATCCAGACAAGAATCCAGATGACCC...CTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | ACAAATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCGGGTCATCTGGATTCTaGTCTGGATGGTGTCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: TNVNMFTAFHVCTSPMTTGSSGF*SGWCRR Trigger: CCTGCGACACCATCCAGACAAGAATCCAGATGACCC...GGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | AGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAAGTTTTCATCTCCAAATaGTTCAGCCACGTAGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: SISCLHFPDDHPETWLNQVFISK*FSHVES Trigger: GGACTCTACGTGGCTGAACAATTTGGAGATGAAAAC...TTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | AAATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCACAAAGTCCGCTGTCTTaGGTTGGGTGCGTTACATGC | + |
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Preference number: 5 (lower is better) Translates to: KCEYVHSISCLHFPDDHPQSPLS*VGCVTC Trigger: GCATGTAACGCACCCAACCAAAGACAGCGGACTTTG...TGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | CACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCCCAGCGATCCATACTaGTCATATATGTTTCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: HSISCLHFPDDHPETWLNPSDPY*SYMFLF Trigger: AAAGAGAAACATATATGACAAGTATGGATCGCTGGG...GTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | GTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGCCCAGCGATCCATACTaGTCATATATGTTTCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: VHSISCLHFPDDHPETWLPSDPY*SYMFLF Trigger: AAAGAGAAACATATATGACAAGTATGGATCGCTGGG...CAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | TGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCTGAACCAAAAAGAGGAGATTGTGTGGGCGTTGTaGATTTCTTTAAACTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: CLHFPDDHPETWLNQKEEIVWAL*ISLNFS Trigger: TGAGAAGTTTAAAGAAATCAACAACGCCCACACAAT...CTCCTCTTTTTGGTTCAGCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | ATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGACATGGCCCCAGCGATCCATACTaGTCATATATGTTTCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: MFTAFHVCTSPMTTQRHGPSDPY*SYMFLF Trigger: AAAGAGAAACATATATGACAAGTATGGATCGCTGGG...GCCATGTCTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | TGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGAGGTTTTCATCTCCAAATaGTTCAGCCACGTAGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: CEYVHSISCLHFPDDHPEVFISK*FSHVES Trigger: GGACTCTACGTGGCTGAACAATTTGGAGATGAAAAC...CTCTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | AATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGGTTTTCATCTCCAAATaGTTCAGCCACGTAGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: NVNMFTAFHVCTSPMTTQVFISK*FSHVES Trigger: GGACTCTACGTGGCTGAACAATTTGGAGATGAAAAC...CTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | TACAAATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACGTTTTCATCTCCAAATaGTTCAGCCACGTAGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: YKCEYVHSISCLHFPDDHVFISK*FSHVES Trigger: GGACTCTACGTGGCTGAACAATTTGGAGATGAAAAC...GTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | AATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACCCAGATTGTGTGGGCGTTGTaGATTTCTTTAAACTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: NVNMFTAFHVCTSPMTTQIVWAL*ISLNFS Trigger: TGAGAAGTTTAAAGAAATCAACAACGCCCACACAAT...CTGGGTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | AAATACAAATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACGACTTTCTCCTGATGTaGACAAAGTCCGCTGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: KYKCEYVHSISCLHFPDDDFLLM*TKSAVF Trigger: AAAGACAGCGGACTTTGTCAACATCAGGAGAAAGTC...GTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATTTGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | TACAAATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCACATTGTGTGGGCGTTGTaGATTTCTTTAAACTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: YKCEYVHSISCLHFPDDHIVWAL*ISLNFS Trigger: TGAGAAGTTTAAAGAAATCAACAACGCCCACACAAT...GTGGTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS-3UTR CAA 90 bp | AAATACAAATGTGAATATGTTCACAGCATTTCATGTTTGCACTTCCCCGATGACCCCAGCGATCCATACTaGTCATATATGTTTCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: KYKCEYVHSISCLHFPDDPSDPY*SYMFLF Trigger: AAAGAGAAACATATATGACAAGTATGGATCGCTGGG...GTCATCGGGGAAGTGCAAACATGAAATGCTGTGAACATATTCACATTTGTATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000165693.2 |
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| CDS CCA 72 bp | GTGACACATAGAACTCCTCTTCTGGTGTCGATGATTTaGGCCGACAATGTCCACAACAACAGTTGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: VTHRTPLLVSMI*ADNVHNNSCSS Trigger: GCTGCTGCAACTGTTGTTGTGGACATTGTCGGCCCAAATCATCGACACCAGAAGAGGAGTTCTATGTGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029132.11 ENSMUST00000118735.8 ENSMUST00000118968.8 ENSMUST00000165693.2 |
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