Pregenerated sensors for DNAJC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000826Ensembl transcript IDs: ENSMUST00000072334.12, ENSMUST00000108796.2, ENSMUST00000108797.8, ENSMUST00000116365.9
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCAAGCAGGGGGTGGGGCACTGGCAAGCACAGGGAGGAGGTTCTaGAGCCTGGGCACTCAGACTCTGCATAAGCAGTTGCATGCCACC | + |
|
Preference number: 1 (lower is better) Translates to: RQAGGGALASTGRRF*SLGTQTLHKQLHAT Trigger: GGTGGCATGCAACTGCTTATGCAGAGTCTGAGTGCCCAGGCTCCAGAACCTCCTCCCTGTGCTTGCCAGTGCCCCACCCCCTGCTTGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 90 bp | CAGGAACCCAACACTCCAGCTGCCAGAGGCATTGATAGTGACAGGTaGAAGCGAAGGCAAGCAGGGGGTGGGGCACTGGCAAGCACAGGG | + |
|
Preference number: 1 (lower is better) Translates to: QEPNTPAARGIDSDR*KRRQAGGGALASTG Trigger: CCCTGTGCTTGCCAGTGCCCCACCCCCTGCTTGCCTTCGCTTCCACCTGTCACTATCAATGCCTCTGGCAGCTGGAGTGTTGGGTTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 90 bp | AGGTTGAGTGACTACTACCATAGCTTCCCTAGAAGCCAACCCTTCTaGGCCAGGAGCACCAGGGTCCAGCCACCTGCTCCAGGAACCCAA | + |
|
Preference number: 1 (lower is better) Translates to: RLSDYYHSFPRSQPF*ARSTRVQPPAPGTQ Trigger: TTGGGTTCCTGGAGCAGGTGGCTGGACCCTGGTGCTCCTGGCTCAGAAGGGTTGGCTTCTAGGGAAGCTATGGTAGTAGTCACTCAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 90 bp | GGGCCACAGAGCCACCACATGAGCCTTCTCCTTCTTCATCTGTTCTaGAAATGCAGATGGGCAGCAGCAGCCAACGGGAAGGTTCTGGAG | + |
|
Preference number: 1 (lower is better) Translates to: GPQSHHMSLLLLHLF*KCRWAAAANGKVLE Trigger: CTCCAGAACCTTCCCGTTGGCTGCTGCTGCCCATCTGCATTTCCAGAACAGATGAAGAAGGAGAAGGCTCATGTGGTGGCTCTGTGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 90 bp | CGGGTCCCCCAGGGTCTCTCCCGACTACTTTCTGTAGGTCAGAAGTaGTCTCCACTGCACAGGATGAGCTTGCATGCACAGATTCCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: RVPQGLSRLLSVGQK*SPLHRMSLHAQIPA Trigger: TGCTGGAATCTGTGCATGCAAGCTCATCCTGTGCAGTGGAGACCACTTCTGACCTACAGAAAGTAGTCGGGAGAGACCCTGGGGGACCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 90 bp | GAGGTTCACAAAGGAATCCTGTGGCCGGGAGCTGGCCTCCCAGGTTaGGTGACTACTACCATAGCTTCCCTAGAAGCCAACCCTTCTGAG | + |
|
Preference number: 1 (lower is better) Translates to: EVHKGILWPGAGLPG*VTTTIASLEANPSE Trigger: CTCAGAAGGGTTGGCTTCTAGGGAAGCTATGGTAGTAGTCACTCAACCTGGGAGGCCAGCTCCCGGCCACAGGATTCCTTTGTGAACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 90 bp | ACTGCCATGTTTGTCCTCACAGTGCTGCCTCTTCTTGTAACTTCCTaGCAACCTGATCTGGTCCTGAAGGCCCTGGTGAGCTGGGGCCAG | + |
|
Preference number: 1 (lower is better) Translates to: TAMFVLTVLPLLVTS*QPDLVLKALVSWGQ Trigger: CTGGCCCCAGCTCACCAGGGCCTTCAGGACCAGATCAGGTTGTCAGGAAGTTACAAGAAGAGGCAGCACTGTGAGGACAAACATGGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 90 bp | AGGTTCCATCCATCAGACAGGGTGCAGATCAGACGAGGAGGGACCTaGTCAGACCTGAGGGACTTCATGGTCAAGGTGTCTTCTTGCACT | + |
|
Preference number: 1 (lower is better) Translates to: RFHPSDRVQIRRGGT*SDLRDFMVKVSSCT Trigger: AGTGCAAGAAGACACCTTGACCATGAAGTCCCTCAGGTCTGAGCAGGTCCCTCCTCGTCTGATCTGCACCCTGTCTGATGGATGGAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR CCA 90 bp | TCCACTGCACAGGATGAGCTTGCATGCACAGATTCCAGCACTCTCTaGGCAACACAGCACAGCACCATCTACACTGCCTGCCAGTATAGG | + |
|
Preference number: 1 (lower is better) Translates to: STAQDELACTDSSTL*ATQHSTIYTACQYR Trigger: CCTATACTGGCAGGCAGTGTAGATGGTGCTGTGCTGTGTTGCCCAGAGAGTGCTGGAATCTGTGCATGCAAGCTCATCCTGTGCAGTGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 90 bp | GACCAGCCAGAGCAGGTCAGGTTGACGGCTGCCTTCCCATCTCAGTaGCTACAGTTCATGATTCTAAGGTTGCAGTGGCCAGATGCTGAT | + |
|
Preference number: 1 (lower is better) Translates to: DQPEQVRLTAAFPSQ*LQFMILRLQWPDAD Trigger: ATCAGCATCTGGCCACTGCAACCTTAGAATCATGAACTGTAGTCACTGAGATGGGAAGGCAGCCGTCAACCTGACCTGCTCTGGCTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 90 bp | TTCAACTCCACCCACCATGGTACCCTAGAACCAAGACTGGAATACTaGCTGGAGAGAGGTTCACAAAGGAATCCTGTGGCCGGGAGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: FNSTHHGTLEPRLEY*LERGSQRNPVAGSW Trigger: CCAGCTCCCGGCCACAGGATTCCTTTGTGAACCTCTCTCCAGTCAGTATTCCAGTCTTGGTTCTAGGGTACCATGGTGGGTGGAGTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 90 bp | AGGTTCTCTGTACTACAGCACCCACACCCTCAGGGGCAGCTTGAATaGTTATGTCACTCTCTCTGGAGTCTACCAGCTGCAGCACTGGCA | + |
|
Preference number: 1 (lower is better) Translates to: RFSVLQHPHPQGQLE*LCHSLWSLPAAALA Trigger: TGCCAGTGCTGCAGCTGGTAGACTCCAGAGAGAGTGACATAATCATTCAAGCTGCCCCTGAGGGTGTGGGTGCTGTAGTACAGAGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR TCA 90 bp | CCACAGGTTCTCTGTACTACAGCACCCACACCCTCAGGGGCAGCTTaGATGATTATGTCACTCTCTCTGGAGTCTACCAGCTGCAGCACT | + |
|
Preference number: 1 (lower is better) Translates to: PQVLCTTAPTPSGAA*MIMSLSLESTSCST Trigger: AGTGCTGCAGCTGGTAGACTCCAGAGAGAGTGACATAATCATTCAAGCTGCCCCTGAGGGTGTGGGTGCTGTAGTACAGAGAACCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 90 bp | TTCTGTAGGTCAGAAGTGGTCTCCACTGCACAGGATGAGCTTGCATaGACAGATTCCAGCACTCTCTGGGCAACACAGCACAGCACCATC | + |
|
Preference number: 1 (lower is better) Translates to: FCRSEVVSTAQDELA*TDSSTLWATQHSTI Trigger: GATGGTGCTGTGCTGTGTTGCCCAGAGAGTGCTGGAATCTGTGCATGCAAGCTCATCCTGTGCAGTGGAGACCACTTCTGACCTACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 90 bp | TTGCACTCTAATAGAAGTGTCTGGAGCTCAGCCTCAGGCTGGTATTaGTGTAAACAGGGACCCCGGTCCAGTCTTCAAATGGCACCCCAG | + |
|
Preference number: 1 (lower is better) Translates to: LHSNRSVWSSASGWY*CKQGPRSSLQMAPQ Trigger: CTGGGGTGCCATTTGAAGACTGGACCGGGGTCCCTGTTTACAGCAATACCAGCCTGAGGCTGAGCTCCAGACACTTCTATTAGAGTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR CCA 90 bp | GTTGTAGGGTCAACTGGGAACTTGGCATCAGTGTCTCCCAGGACCTaGATGGGTTCCCTTGATCACTGCCATGTTTGTCCTCACAGTGCT | + |
|
Preference number: 1 (lower is better) Translates to: VVGSTGNLASVSPRT*MGSLDHCHVCPHSA Trigger: AGCACTGTGAGGACAAACATGGCAGTGATCAAGGGAACCCATCCAGGTCCTGGGAGACACTGATGCCAAGTTCCCAGTTGACCCTACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 90 bp | GGGACCTGCTCAGACCTGAGGGACTTCATGGTCAAGGTGTCTTCTTaGACTCTAATAGAAGTGTCTGGAGCTCAGCCTCAGGCTGGTATT | + |
|
Preference number: 1 (lower is better) Translates to: GTCSDLRDFMVKVSS*TLIEVSGAQPQAGI Trigger: AATACCAGCCTGAGGCTGAGCTCCAGACACTTCTATTAGAGTGCAAGAAGACACCTTGACCATGAAGTCCCTCAGGTCTGAGCAGGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR CCA 90 bp | AGACAGCTCACCATGTGGAACCACCACAGCTTTCAGCTTGGCTCTTaGAGGAACATCAGTCAGCCTGAACTGACAGCAACTTGTACCCTG | + |
|
Preference number: 1 (lower is better) Translates to: RQLTMWNHHSFQLGS*RNISQPELTATCTL Trigger: CAGGGTACAAGTTGCTGTCAGTTCAGGCTGACTGATGTTCCTCCAAGAGCCAAGCTGAAAGCTGTGGTGGTTCCACATGGTGAGCTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR CCA 90 bp | GGACTTCATGGTCAAGGTGTCTTCTTGCACTCTAATAGAAGTGTCTaGAGCTCAGCCTCAGGCTGGTATTGCTGTAAACAGGGACCCCGG | + |
|
Preference number: 1 (lower is better) Translates to: GLHGQGVFLHSNRSV*SSASGWYCCKQGPR Trigger: CCGGGGTCCCTGTTTACAGCAATACCAGCCTGAGGCTGAGCTCCAGACACTTCTATTAGAGTGCAAGAAGACACCTTGACCATGAAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 90 bp | CCATATCACAGGACACAGAGGCCAACAAGGAGATGTAGCTCCAGGTaGTTACCTGACTCCTGTAAGCACAAGGAGACAGCTGAACCTTCA | + |
|
Preference number: 1 (lower is better) Translates to: PYHRTQRPTRRCSSR*LPDSCKHKETAEPS Trigger: TGAAGGTTCAGCTGTCTCCTTGTGCTTACAGGAGTCAGGTAAGCACCTGGAGCTACATCTCCTTGTTGGCCTCTGTGTCCTGTGATATGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 90 bp | CACAACTGTTCCTCAATAAAAGGTGCACTGAAAGCCAAAGTAGGATaGTCACGGCCCACAGGTTCTCTGTACTACAGCACCCACACCCTC | + |
|
Preference number: 1 (lower is better) Translates to: HNCSSIKGALKAKVG*SRPTGSLYYSTHTL Trigger: GAGGGTGTGGGTGCTGTAGTACAGAGAACCTGTGGGCCGTGAGCATCCTACTTTGGCTTTCAGTGCACCTTTTATTGAGGAACAGTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR CCA 90 bp | TTAAATACTGCATGCTACGCACTTCATGTATCAAGGATTGACAGATaGGTGGACTTAGAGGAGGTGGGAGTGGCCCTGACCAGCCAGAGC | + |
|
Preference number: 1 (lower is better) Translates to: LNTACYALHVSRIDR*VDLEEVGVALTSQS Trigger: GCTCTGGCTGGTCAGGGCCACTCCCACCTCCTCTAAGTCCACCCATCTGTCAATCCTTGATACATGAAGTGCGTAGCATGCAGTATTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 90 bp | GATATCAGAGCCCTGTCTGCAGCCTTGAGGATGAGATCAGAGCCATaGACTAGACCATATCACAGGACACAGAGGCCAACAAGGAGATGT | + |
|
Preference number: 1 (lower is better) Translates to: DIRALSAALRMRSEP*TRPYHRTQRPTRRC Trigger: ACATCTCCTTGTTGGCCTCTGTGTCCTGTGATATGGTCTAGTCCATGGCTCTGATCTCATCCTCAAGGCTGCAGACAGGGCTCTGATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 90 bp | GTCTTCTTGCACTCTAATAGAAGTGTCTGGAGCTCAGCCTCAGGCTaGTATTGCTGTAAACAGGGACCCCGGTCCAGTCTTCAAATGGCA | + |
|
Preference number: 1 (lower is better) Translates to: VFLHSNRSVWSSASG*YCCKQGPRSSLQMA Trigger: TGCCATTTGAAGACTGGACCGGGGTCCCTGTTTACAGCAATACCAGCCTGAGGCTGAGCTCCAGACACTTCTATTAGAGTGCAAGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR TCA 90 bp | CACTGCTTTAAATACTGCATGCTACGCACTTCATGTATCAAGGATTaGCAGATGGGTGGACTTAGAGGAGGTGGGAGTGGCCCTGACCAG | + |
|
Preference number: 1 (lower is better) Translates to: HCFKYCMLRTSCIKD*QMGGLRGGGSGPDQ Trigger: CTGGTCAGGGCCACTCCCACCTCCTCTAAGTCCACCCATCTGTCAATCCTTGATACATGAAGTGCGTAGCATGCAGTATTTAAAGCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 90 bp | CTTCAGAAACACATGATGGTTTGTCTGGGCCACAGAGCCACCACATaGGCCTTCTCCTTCTTCATCTGTTCTGGAAATGCAGATGGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: LQKHMMVCLGHRATT*AFSFFICSGNADGQ Trigger: CTGCCCATCTGCATTTCCAGAACAGATGAAGAAGGAGAAGGCTCATGTGGTGGCTCTGTGGCCCAGACAAACCATCATGTGTTTCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 90 bp | TTATGTGGTCAAGGTCTCACTCTCAGGATTAGCAAGTACCACATATaGCAGAACCAGTTTCATGCAGCTCCCACCGTGTGCTACCCCAGA | + |
|
Preference number: 1 (lower is better) Translates to: LCGQGLTLRISKYHI*QNQFHAAPTVCYPR Trigger: TCTGGGGTAGCACACGGTGGGAGCTGCATGAAACTGGTTCTGGCATATGTGGTACTTGCTAATCCTGAGAGTGAGACCTTGACCACATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR CCA 90 bp | ATGCAGATGGGCAGCAGCAGCCAACGGGAAGGTTCTGGAGGAACCTaGCTCATTGAAGTCTGGTACAACTATCTAGCTAACTGTAAAAGG | + |
|
Preference number: 1 (lower is better) Translates to: MQMGSSSQREGSGGT*LIEVWYNYLANCKR Trigger: CCTTTTACAGTTAGCTAGATAGTTGTACCAGACTTCAATGAGCCAGGTTCCTCCAGAACCTTCCCGTTGGCTGCTGCTGCCCATCTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 90 bp | TTTCATGCAGCTCCCACCGTGTGCTACCCCAGATCTTGTTCACAGTaGACCAGAAATAGGGCCAGCCCAAATACTCACTACAAAAGTATG | + |
|
Preference number: 1 (lower is better) Translates to: FHAAPTVCYPRSCSQ*TRNRASPNTHYKSM Trigger: CATACTTTTGTAGTGAGTATTTGGGCTGGCCCTATTTCTGGTGCACTGTGAACAAGATCTGGGGTAGCACACGGTGGGAGCTGCATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 90 bp | GAGGGTCAGCCCAAAAGGGACCCAGCAACAGGGGTCAACATCAGGTaGCATTTCAGTGCCAAATTCACAAATAATATTTGGCAGGAAATC | + |
|
Preference number: 1 (lower is better) Translates to: EGQPKRDPATGVNIR*HFSAKFTNNIWQEI Trigger: GATTTCCTGCCAAATATTATTTGTGAATTTGGCACTGAAATGGCACCTGATGTTGACCCCTGTTGCTGGGTCCCTTTTGGGCTGACCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR CCA 90 bp | TCCTTGAGGGTCAGGCGACCTTCACATGGTTCCCAGGGATATATTTaGTATGATCATCCTTTTATCCACATAGAGCTGAAGCCAACCCTG | + |
|
Preference number: 1 (lower is better) Translates to: SLRVRRPSHGSQGYI*YDHPFIHIELKPTL Trigger: CAGGGTTGGCTTCAGCTCTATGTGGATAAAAGGATGATCATACCAAATATATCCCTGGGAACCATGTGAAGGTCGCCTGACCCTCAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 90 bp | ATCAGTCACGGTTTACACTGTTCACAACTGTTCCTCAATAAAAGGTaGACTGAAAGCCAAAGTAGGATGCTCACGGCCCACAGGTTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: ISHGLHCSQLFLNKR*TESQSRMLTAHRFS Trigger: AGAGAACCTGTGGGCCGTGAGCATCCTACTTTGGCTTTCAGTGCACCTTTTATTGAGGAACAGTTGTGAACAGTGTAAACCGTGACTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 90 bp | GGCCCTTCCTTGGCAGCAGAGACCCTAACTAGCCTGTCCTTTACATaGACCCAGATTACTGACTTTTACCTGGTACTTATAAAACTAGTC | + |
|
Preference number: 1 (lower is better) Translates to: GPSLAAETLTSLSFT*TQITDFYLVLIKLV Trigger: GACTAGTTTTATAAGTACCAGGTAAAAGTCAGTAATCTGGGTGCATGTAAAGGACAGGCTAGTTAGGGTCTCTGCTGCCAAGGAAGGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 90 bp | CAGTCTGTAGCAGTGGGTAAACCTAAGACAGGCTTTACCTGCTCTTaGTTTGAGCTCTCTTTCCCCAACTTGGAATTGAGACACTTTCCT | + |
|
Preference number: 1 (lower is better) Translates to: QSVAVGKPKTGFTCS*FELSFPNLELRHFP Trigger: AGGAAAGTGTCTCAATTCCAAGTTGGGGAAAGAGAGCTCAAAGCAAGAGCAGGTAAAGCCTGTCTTAGGTTTACCCACTGCTACAGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 90 bp | GTAAACCAGTCTGTAGCAGTGGGTAAACCTAAGACAGGCTTTACCTaGTCTTGCTTTGAGCTCTCTTTCCCCAACTTGGAATTGAGACAC | + |
|
Preference number: 1 (lower is better) Translates to: VNQSVAVGKPKTGFT*SCFELSFPNLELRH Trigger: GTGTCTCAATTCCAAGTTGGGGAAAGAGAGCTCAAAGCAAGAGCAGGTAAAGCCTGTCTTAGGTTTACCCACTGCTACAGACTGGTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR TCA 90 bp | ACTTGTTGCTTTGCCACCAAACAGAGGCATGACAGGCCTGCTGTGTaGTATATACATATACACATATGTACACACACTGACACACACCAC | + |
|
Preference number: 1 (lower is better) Translates to: TCCFATKQRHDRPAV*YIHIHICTHTDTHH Trigger: GTGGTGTGTGTCAGTGTGTGTACATATGTGTATATGTATATATCACACAGCAGGCCTGTCATGCCTCTGTTTGGTGGCAAAGCAACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 90 bp | TCCTTTTATCCACATAGAGCTGAAGCCAACCCTGGCCAGGGCTTATaGATTCAGGTTCATGTATCTATGTACACAATAAACTTAGGGTTT | + |
|
Preference number: 1 (lower is better) Translates to: SFYPHRAEANPGQGL*IQVHVSMYTINLGF Trigger: AAACCCTAAGTTTATTGTGTACATAGATACATGAACCTGAATGCATAAGCCCTGGCCAGGGTTGGCTTCAGCTCTATGTGGATAAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 90 bp | GATAAAACAGAAGAAGACCGTAGCTACACTGCTTTAAATACTGCATaGTACGCACTTCATGTATCAAGGATTGACAGATGGGTGGACTTA | + |
|
Preference number: 1 (lower is better) Translates to: DKTEEDRSYTALNTA*YALHVSRIDRWVDL Trigger: TAAGTCCACCCATCTGTCAATCCTTGATACATGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTTCTGTTTTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGCTTGCATGCACAGATTCCAGCACTCTCTGGGCAACACAGCACAGCACCAGCTGGGGCCAGGAGGTaGGCGGGGTGGGCTTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: MSLHAQIPALSGQHSTAPAGARR*AGWASE Trigger: TTCTGAAGCCCACCCCGCCCACCTCCTGGCCCCAGC...TGGTGCTGTGCTGTGTTGCCCAGAGAGTGCTGGAATCTGTGCATGCAAGCTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | GGAAATGCAGATGGGCAGCAGCAGCCAACGGGAAGGTTCTGGAGGAACCTGGCTAAGATGACCCAGGAATaGGGGAAGGAGGCTGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GNADGQQQPTGRFWRNLAKMTQE*GKEAVA Trigger: GGCCACAGCCTCCTTCCCTCATTCCTGGGTCATCTT...AGCCAGGTTCCTCCAGAACCTTCCCGTTGGCTGCTGCTGCCCATCTGCATTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAAATGCAGATGGGCAGCAGCAGCCAACGGGAAGGTTCTGGAGGAACCTGGCTACAGGGAGGAGGTTCTaGAGCCTGGGCACTCAGACT | + |
|
Preference number: 2 (lower is better) Translates to: GNADGQQQPTGRFWRNLATGRRF*SLGTQT Trigger: AGTCTGAGTGCCCAGGCTCCAGAACCTCCTCCCTGT...AGCCAGGTTCCTCCAGAACCTTCCCGTTGGCTGCTGCTGCCCATCTGCATTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTTCACAAAGGAATCCTGTGGCCGGGAGCTGGCCTCCCAGGTTGAGTGACTACCGTCGGTGTGATAGCTaGGGTGGGAGTCAGCTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: GSQRNPVAGSWPPRLSDYRRCDS*GGSQLS Trigger: TGACAGCTGACTCCCACCCCAGCTATCACACCGACG...GTAGTCACTCAACCTGGGAGGCCAGCTCCCGGCCACAGGATTCCTTTGTGAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116365.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCCTGGAAGACGGGGCCCAGTTCCCTCCTTTGCAGGTGATATCAGAGCCCTGTGGTCTCTGTGGCAGATaGTGGCTGTATGACGATCGG | + |
|
Preference number: 2 (lower is better) Translates to: CLEDGAQFPPLQVISEPCGLCGR*WLYDDR Trigger: CCGATCGTCATACAGCCAGCATCTGCCACAGAGACC...ACAGGGCTCTGATATCACCTGCAAAGGAGGGAACTGGGCCCCGTCTTCCAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116365.9 |
||
| 3UTR CAA 90 bp | ACATATCAAGAGCACACCCTATGGGGCACTGGCCCAGGCCCTTCCTaGGCAGCAGAGACCCTAACTAGCCTGTCCTTTACATGCACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: TYQEHTLWGTGPGPS*AAETLTSLSFTCTQ Trigger: CTGGGTGCATGTAAAGGACAGGCTAGTTAGGGTCTCTGCTGCCAAGGAAGGGCCTGGGCCAGTGCCCCATAGGGTGTGCTCTTGATATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCAGCAGCCTTGGCAGGGGGTGGGGCACTaGCAAGCACAGGGAGGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: TRKDITGHKQKPTLQQPWQGVGH*QAQGGG Trigger: ACCTCCTCCCTGTGCTTGCCAGTGCCCCACCCCCTG...CCAAGGCTGCTGGAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | GCACAGGGAGGAGGTTCTGGAGCCTGGGCACTCAGACTCTGCATAAGCAGTTGCCGTCAATCCAGCTTTTaGCCTGGAAAGGTGCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: AQGGGSGAWALRLCISSCRQSSF*PGKVQN Trigger: GTTCTGCACCTTTCCAGGTCAAAAGCTGGATTGACG...GCAACTGCTTATGCAGAGTCTGAGTGCCCAGGCTCCAGAACCTCCTCCCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGCTTGCATGCACAGATTCCAGCACTCTCTGGGCAACACAGCACAGCACCATCCCCAGCACCCCAGGTTaGCCAGTGACTTCTTTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: ELACTDSSTLWATQHSTIPSTPG*PVTSFS Trigger: GGAAAAAGAAGTCACTGGTCAACCTGGGGTGCTGGG...GATGGTGCTGTGCTGTGTTGCCCAGAGAGTGCTGGAATCTGTGCATGCAAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGCACCAGGGTCCAGCCACCTGCTCCAGGAACCCAACACTCCAGCTGCCAGAGCTAAGTGGCAGGTGCTaGCATTTGTGGTTCTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: EHQGPATCSRNPTLQLPELSGRC*HLWFLK Trigger: TTTTAAGAACCACAAATGGCAGCACCTGCCACTTAG...CTCTGGCAGCTGGAGTGTTGGGTTCCTGGAGCAGGTGGCTGGACCCTGGTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | AGACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCAGCAGCCTTCCTGTGGCCGGGAGCTaGCCTCCCAGGTTGAGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: RQGKTSLGTNRNLHSSSLPVAGS*PPRLSD Trigger: GTCACTCAACCTGGGAGGCCAGCTCCCGGCCACAGG...AAGGCTGCTGGAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGTCCCAGTTCAGGATCTAGCTCGTTAGGATGTGAGGGAAAGGGCCACAGACACAAAGGAATCCTGTaGCCGGGAGCTGGCCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: TSPSSGSSSLGCEGKGHRHKGIL*PGAGLP Trigger: TGGGAGGCCAGCTCCCGGCCACAGGATTCCTTTGTG...TCTGTGGCCCTTTCCCTCACATCCTAACGAGCTAGATCCTGAACTGGGACTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTGAGTTAGGGTCTTACTGTGTAAGCCCAGACTGGTCTACAACTCAAGGTCCTGCTGGGGCCAGGAGGTaGGCGGGGTGGGCTTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: FELGSYCVSPDWSTTQGPAGARR*AGWASE Trigger: TTCTGAAGCCCACCCCGCCCACCTCCTGGCCCCAGC...AGGACCTTGAGTTGTAGACCAGTCTGGGCTTACACAGTAAGACCCTAACTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CAA 90 bp | CCCACAGGTTCTCTGTACTACAGCACCCACACCCTCAGGGGCAGCTaGAATGATTATGTCACTCTCTCTGGAGTCTACCAGCTGCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: PTGSLYYSTHTLRGS*NDYVTLSGVYQLQH Trigger: GTGCTGCAGCTGGTAGACTCCAGAGAGAGTGACATAATCATTCAAGCTGCCCCTGAGGGTGTGGGTGCTGTAGTACAGAGAACCTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR TCA 90 bp | AGGGTCAACTGGGAACTTGGCATCAGTGTCTCCCAGGACCTGGATGGGTTCCCTGGCTTCAGAAACACATaGTGGTTTGTCTGGGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: RVNWELGISVSQDLDGFPGFRNT*WFVWAT Trigger: TGTGGCCCAGACAAACCATCATGTGTTTCTGAAGCC...AGGGAACCCATCCAGGTCCTGGGAGACACTGATGCCAAGTTCCCAGTTGACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGCACCAGGGTCCAGCCACCTGCTCCAGGAACCCAACACTCCAGCTGCCAGAGTTTGACCTGGAAAGGTaGAGAACAGAGACAAATGAT | + |
|
Preference number: 2 (lower is better) Translates to: EHQGPATCSRNPTLQLPEFDLER*RTETND Trigger: ATCATTTGTCTCTGTTCTGCACCTTTCCAGGTCAAA...CTCTGGCAGCTGGAGTGTTGGGTTCCTGGAGCAGGTGGCTGGACCCTGGTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR GCA 90 bp | GTAAACAGGGACCCCGGTCCAGTCTTCAAATGGCACCCCAGGAACACATGGATTCTGGAGTCTACCAGCTaGAGCACTGGCACCTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: VNRDPGPVFKWHPRNTWILESTS*STGTSF Trigger: AAAGGAGGTGCCAGTGCTGCAGCTGGTAGACTCCAG...AATCCATGTGTTCCTGGGGTGCCATTTGAAGACTGGACCGGGGTCCCTGTTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR CCA 90 bp | CTTCATCTGTTCTGGAAATGCAGATGGGCAGCAGCAGCCAACGGGAAGGTTCTGTTCTGGAAATGCAGATaGGCAGCAGCAGCCAACGGG | + |
|
Preference number: 2 (lower is better) Translates to: LHLFWKCRWAAAANGKVLFWKCR*AAAANG Trigger: CCCGTTGGCTGCTGCTGCCCATCTGCATTTCCAGAA...CAGAACCTTCCCGTTGGCTGCTGCTGCCCATCTGCATTTCCAGAACAGATGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTGACAGATGGGTGGACTTAGAGGAGGTGGGAGTGGCCCTGACCAGCCAGAGCGCCTTCCCATCTCAGTaGCTACAGTTCATGATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: IDRWVDLEEVGVALTSQSAFPSQ*LQFMIL Trigger: TAGAATCATGAACTGTAGTCACTGAGATGGGAAGGC...GCTCTGGCTGGTCAGGGCCACTCCCACCTCCTCTAAGTCCACCCATCTGTCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTTCACAAAGGAATCCTGTGGCCGGGAGCTGGCCTCCCAGGTTGAGTGACTACATCCAGCTTTTGACCTaGAAAGGTGCAGAACAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GSQRNPVAGSWPPRLSDYIQLLT*KGAEQR Trigger: TCTCTGTTCTGCACCTTTCCAGGTCAAAAGCTGGAT...GTAGTCACTCAACCTGGGAGGCCAGCTCCCGGCCACAGGATTCCTTTGTGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCAGCAGCCTTGGACAGGGAGGAGGTTCTaGAGCCTGGGCACTCAGACT | + |
|
Preference number: 2 (lower is better) Translates to: TRKDITGHKQKPTLQQPWTGRRF*SLGTQT Trigger: AGTCTGAGTGCCCAGGCTCCAGAACCTCCTCCCTGT...CCAAGGCTGCTGGAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGTCCCAGTTCAGGATCTAGCTCGTTAGGATGTGAGGGAAAGGGCCACAGATTCTGGAAATGCAGATaGGCAGCAGCAGCCAACGGG | + |
|
Preference number: 2 (lower is better) Translates to: TSPSSGSSSLGCEGKGHRFWKCR*AAAANG Trigger: CCCGTTGGCTGCTGCTGCCCATCTGCATTTCCAGAA...TCTGTGGCCCTTTCCCTCACATCCTAACGAGCTAGATCCTGAACTGGGACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGTCCCAGTTCAGGATCTAGCTCGTTAGGATGTGAGGGAAAGGGCCACAGAGTGTCTCCCAGGACCTaGATGGGTTCCCTTGATCAC | + |
|
Preference number: 2 (lower is better) Translates to: TSPSSGSSSLGCEGKGHRVSPRT*MGSLDH Trigger: GTGATCAAGGGAACCCATCCAGGTCCTGGGAGACAC...TCTGTGGCCCTTTCCCTCACATCCTAACGAGCTAGATCCTGAACTGGGACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CAA 90 bp | CTACTTTCTGTAGGTCAGAAGTGGTCTCCACTGCACAGGATGAGCTaGCATGCACAGATTCCAGCACTCTCTGGGCAACACAGCACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LLSVGQKWSPLHRMS*HAQIPALSGQHSTA Trigger: TGCTGTGCTGTGTTGCCCAGAGAGTGCTGGAATCTGTGCATGCAAGCTCATCCTGTGCAGTGGAGACCACTTCTGACCTACAGAAAGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CAA 90 bp | AGGGACCTGCTCAGACCTGAGGGACTTCATGGTCAAGGTGTCTTCTaGCACTCTAATAGAAGTGTCTGGAGCTCAGCCTCAGGCTGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: RDLLRPEGLHGQGVF*HSNRSVWSSASGWY Trigger: ATACCAGCCTGAGGCTGAGCTCCAGACACTTCTATTAGAGTGCAAGAAGACACCTTGACCATGAAGTCCCTCAGGTCTGAGCAGGTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR TCA 90 bp | ACTGGAATACTGACTGGAGAGAGGTTCACAAAGGAATCCTGTGGCCGGGAGCTGCGTCAATCCAGCTTTTaGCCTGGAAAGGTGCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: TGILTGERFTKESCGRELRQSSF*PGKVQN Trigger: GTTCTGCACCTTTCCAGGTCAAAAGCTGGATTGACG...CAGCTCCCGGCCACAGGATTCCTTTGTGAACCTCTCTCCAGTCAGTATTCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | AGACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCAGCAGCCTTAAGATGACCCAGGAATaGGGGAAGGAGGCTGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: RQGKTSLGTNRNLHSSSLKMTQE*GKEAVA Trigger: GGCCACAGCCTCCTTCCCTCATTCCTGGGTCATCTT...AAGGCTGCTGGAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | CATAGTAAAACCCTGCAAGGGAGTCTGCACAGGGACAGGTCAGGGTACTTACTGCACAGAGCCACCACATaGGCCTTCTCCTTCTTCATC | + |
|
Preference number: 2 (lower is better) Translates to: HSKTLQGSLHRDRSGYLLHRATT*AFSFFI Trigger: GATGAAGAAGGAGAAGGCTCATGTGGTGGCTCTGTG...CAGTAAGTACCCTGACCTGTCCCTGTGCAGACTCCCTTGCAGGGTTTTACTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | GTAAACAGGGACCCCGGTCCAGTCTTCAAATGGCACCCCAGGAACACATGGATTCCCCAGGTTGACCAGTaGCTTCTTTTTCCTTTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: VNRDPGPVFKWHPRNTWIPQVDQ*LLFPLS Trigger: GGACAAAGGAAAAAGAAGTCACTGGTCAACCTGGGG...AATCCATGTGTTCCTGGGGTGCCATTTGAAGACTGGACCGGGGTCCCTGTTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR TCA 90 bp | ATGAGCTTGCATGCACAGATTCCAGCACTCTCTGGGCAACACAGCACAGCACCACCCCAGGTTGACCAGTaGCTTCTTTTTCCTTTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: MSLHAQIPALSGQHSTAPPQVDQ*LLFPLS Trigger: GGACAAAGGAAAAAGAAGTCACTGGTCAACCTGGGG...TGGTGCTGTGCTGTGTTGCCCAGAGAGTGCTGGAATCTGTGCATGCAAGCTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR GCA 90 bp | ACTGGAATACTGACTGGAGAGAGGTTCACAAAGGAATCCTGTGGCCGGGAGCTGTTAATTCAGCCCAGCTaGAGCACGTCCACAACACAG | + |
|
Preference number: 2 (lower is better) Translates to: TGILTGERFTKESCGRELLIQPS*STSTTQ Trigger: CTGTGTTGTGGACGTGCTGCAGCTGGGCTGAATTAA...CAGCTCCCGGCCACAGGATTCCTTTGTGAACCTCTCTCCAGTCAGTATTCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCAGGTCAGGTTGACGGCTGCCTTCCCATCTCAGTGACTACAGTTCATGATCTCAACAGTCCCAGATaGCACCACAAACACTCTCGG | + |
|
Preference number: 2 (lower is better) Translates to: RAGQVDGCLPISVTTVHDLNSPR*HHKHSR Trigger: CCGAGAGTGTTTGTGGTGGCATCTGGGACTGTTGAG...ATCATGAACTGTAGTCACTGAGATGGGAAGGCAGCCGTCAACCTGACCTGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | AGACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCAGCAGCCTTGAGGGAAGGAGGCTGTaGCCCCGTCAATCCAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: RQGKTSLGTNRNLHSSSLEGRRL*PRQSSF Trigger: AAAGCTGGATTGACGGGGCCACAGCCTCCTTCCCTC...AAGGCTGCTGGAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTCAAATGGCACCCCAGGAACACATGGATTTTGTAGTAGTCCAGGACTGGACCGTGTCTCCCAGGACCTaGATGGGTTCCCTTGATCAC | + |
|
Preference number: 2 (lower is better) Translates to: LQMAPQEHMDFVVVQDWTVSPRT*MGSLDH Trigger: GTGATCAAGGGAACCCATCCAGGTCCTGGGAGACAC...GGTCCAGTCCTGGACTACTACAAAATCCATGTGTTCCTGGGGTGCCATTTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR CCA 90 bp | CCATGGACTAGACCATATCACAGGACACAGAGGCCAACAAGGAGATGTAGCTCCCTCTGTGGCAGATGCTaGCTGTATGACGATCGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: PWTRPYHRTQRPTRRCSSLCGRC*LYDDRC Trigger: ACACCGATCGTCATACAGCCAGCATCTGCCACAGAG...GGAGCTACATCTCCTTGTTGGCCTCTGTGTCCTGTGATATGGTCTAGTCCATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTTCATCTGTTCTGGAAATGCAGATGGGCAGCAGCAGCCAACGGGAAGGTTAAGGAATGTGGAAGATaGCCCAGGAATGAGGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LLHLFWKCRWAAAANGKVKECGR*PRNEGR Trigger: CCTTCCCTCATTCCTGGGTCATCTTCCACATTCCTT...AACCTTCCCGTTGGCTGCTGCTGCCCATCTGCATTTCCAGAACAGATGAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGAGCTTGCATGCACAGATTCCAGCACTCTCTGGGCAACACAGCACAGCACCACCAAGACTGGAATACTaGCTGGAGAGAGGTTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: MSLHAQIPALSGQHSTAPPRLEY*LERGSQ Trigger: TTGTGAACCTCTCTCCAGTCAGTATTCCAGTCTTGG...TGGTGCTGTGCTGTGTTGCCCAGAGAGTGCTGGAATCTGTGCATGCAAGCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCAGCAGCCTTGGCACAGAGCCACCACATaGGCCTTCTCCTTCTTCATC | + |
|
Preference number: 2 (lower is better) Translates to: TRKDITGHKQKPTLQQPWHRATT*AFSFFI Trigger: GATGAAGAAGGAGAAGGCTCATGTGGTGGCTCTGTG...CCAAGGCTGCTGGAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAAGTCCCAGTTCAGGATCTAGCTCGTTAGGATGTGAGGGAAAGGGCCACAGAGGCTTCAGAAACACATaGTGGTTTGTCTGGGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: TSPSSGSSSLGCEGKGHRGFRNT*WFVWAT Trigger: TGTGGCCCAGACAAACCATCATGTGTTTCTGAAGCC...TCTGTGGCCCTTTCCCTCACATCCTAACGAGCTAGATCCTGAACTGGGACTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTCAAATGGCACCCCAGGAACACATGGATTTTGTAGTAGTCCAGGACTGGACCATGAGGTATCAGAACTaGGAGGGAGGGGTGCTCACA | + |
|
Preference number: 2 (lower is better) Translates to: LQMAPQEHMDFVVVQDWTMRYQN*EGGVLT Trigger: TGTGAGCACCCCTCCCTCTCAGTTCTGATACCTCAT...GGTCCAGTCCTGGACTACTACAAAATCCATGTGTTCCTGGGGTGCCATTTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR GCA 90 bp | GTCAAAAGGAAGACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCCCTGCAAGGGAGTCTaGACAGGGACAGGTCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: VKRKTRKDITGHKQKPTLPCKGV*TGTGQG Trigger: ACCCTGACCTGTCCCTGTGCAGACTCCCTTGCAGGG...GAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGTCTTCCTTTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTAAATACTGCATGCTACGCACTTCATGTATCAAGGATTGACAGATGGGTGCAGAGCAGGTCAGGTTaGCGGCTGCCTTCCCATCTC | + |
|
Preference number: 2 (lower is better) Translates to: ALNTACYALHVSRIDRWVQSRSG*RLPSHL Trigger: GAGATGGGAAGGCAGCCGTCAACCTGACCTGCTCTG...CACCCATCTGTCAATCCTTGATACATGAAGTGCGTAGCATGCAGTATTTAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGGAAGGAGGCTGTGGCCCCGTCAATCCAGCTTTTGACCTGGAAAGGTGCAGACACTGCTTTAAATACTaGATGCTACGCACTTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: REGGCGPVNPAFDLERCRHCFKY*MLRTSC Trigger: ACATGAAGTGCGTAGCATGCAGTATTTAAAGCAGTG...TCTGCACCTTTCCAGGTCAAAAGCTGGATTGACGGGGCCACAGCCTCCTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGCTTGCATGCACAGATTCCAGCACTCTCTGGGCAACACAGCACAGCACCATCCTAAGTGGCAGGTGCTaGCATTTGTGGTTCTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: ELACTDSSTLWATQHSTILSGRC*HLWFLK Trigger: TTTTAAGAACCACAAATGGCAGCACCTGCCACTTAG...GATGGTGCTGTGCTGTGTTGCCCAGAGAGTGCTGGAATCTGTGCATGCAAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAAGTCCCAGTTCAGGATCTAGCTCGTTAGGATGTGAGGGAAAGGGCCACAGAGGTTCCCTTGATCACTaGCATGTTTGTCCTCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: TSPSSGSSSLGCEGKGHRGSLDH*HVCPHS Trigger: ACTGTGAGGACAAACATGGCAGTGATCAAGGGAACC...TCTGTGGCCCTTTCCCTCACATCCTAACGAGCTAGATCCTGAACTGGGACTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | ACTGGAATACTGACTGGAGAGAGGTTCACAAAGGAATCCTGTGGCCGGGAGCTGATGAGATCAGAGCCATaGACTAGACCATATCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: TGILTGERFTKESCGRELMRSEP*TRPYHR Trigger: CCTGTGATATGGTCTAGTCCATGGCTCTGATCTCAT...CAGCTCCCGGCCACAGGATTCCTTTGTGAACCTCTCTCCAGTCAGTATTCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAGGAAGACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCAGAGGGAAGGAGGCTGTaGCCCCGTCAATCCAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: QKEDKERHHWAQTETYTPEGRRL*PRQSSF Trigger: AAAGCTGGATTGACGGGGCCACAGCCTCCTTCCCTC...TGGAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGTCTTCCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | CATAGTAAAACCCTGCAAGGGAGTCTGCACAGGGACAGGTCAGGGTACTTACTGCTGACTATGACTAAGTaGCAGGTGCTGCCATTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: HSKTLQGSLHRDRSGYLLLTMTK*QVLPFV Trigger: CACAAATGGCAGCACCTGCCACTTAGTCATAGTCAG...CAGTAAGTACCCTGACCTGTCCCTGTGCAGACTCCCTTGCAGGGTTTTACTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | CATAGTAAAACCCTGCAAGGGAGTCTGCACAGGGACAGGTCAGGGTACTTACTGTGTTGTAGGGTCAACTaGGAACTTGGCATCAGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: HSKTLQGSLHRDRSGYLLCCRVN*ELGISV Trigger: GACACTGATGCCAAGTTCCCAGTTGACCCTACAACA...CAGTAAGTACCCTGACCTGTCCCTGTGCAGACTCCCTTGCAGGGTTTTACTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGAGCTTGCATGCACAGATTCCAGCACTCTCTGGGCAACACAGCACAGCACCATCATGTATCAAGGATTaGCAGATGGGTGGACTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: MSLHAQIPALSGQHSTAPSCIKD*QMGGLR Trigger: TCTAAGTCCACCCATCTGTCAATCCTTGATACATGA...TGGTGCTGTGCTGTGTTGCCCAGAGAGTGCTGGAATCTGTGCATGCAAGCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTGAGTTAGGGTCTTACTGTGTAAGCCCAGACTGGTCTACAACTCAAGGTCCTCATCTGTTCTGGAAATaGAGATGGGCAGCAGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: FELGSYCVSPDWSTTQGPHLFWK*RWAAAA Trigger: GGCTGCTGCTGCCCATCTGCATTTCCAGAACAGATG...AGGACCTTGAGTTGTAGACCAGTCTGGGCTTACACAGTAAGACCCTAACTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | GTCAAAAGGAAGACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCGGAGGTTCTGGAGCCTaGGCACTCAGACTCTGCATA | + |
|
Preference number: 2 (lower is better) Translates to: VKRKTRKDITGHKQKPTLGGSGA*ALRLCI Trigger: TATGCAGAGTCTGAGTGCCCAGGCTCCAGAACCTCC...GAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGTCTTCCTTTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGCTTGCATGCACAGATTCCAGCACTCTCTGGGCAACACAGCACAGCACCAGGTACTTACTGGCCGTaGCAATCACTATTATCACTT | + |
|
Preference number: 2 (lower is better) Translates to: MSLHAQIPALSGQHSTAPGTYWP*QSLLSL Trigger: AAGTGATAATAGTGATTGCCACGGCCAGTAAGTACC...TGGTGCTGTGCTGTGTTGCCCAGAGAGTGCTGGAATCTGTGCATGCAAGCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTCAGGGGCAGCTTGAATGATTATGTCACTCTCTCTGGAGTCTACCAGCTGCTGGTTTTTCCCCATTaGGTACTGGCTGTGTTAACT | + |
|
Preference number: 2 (lower is better) Translates to: TLRGSLNDYVTLSGVYQLLVFPH*VLAVLT Trigger: AGTTAACACAGCCAGTACCCAATGGGGAAAAACCAG...CAGCTGGTAGACTCCAGAGAGAGTGACATAATCATTCAAGCTGCCCCTGAGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR TCA 90 bp | ACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCAGCAGCCTTGGCAGAACAGAGACAAATaGTTTCCCACACACCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: TRKDITGHKQKPTLQQPWQNRDK*FPTHQQ Trigger: TTGCTGGTGTGTGGGAAATCATTTGTCTCTGTTCTG...CCAAGGCTGCTGGAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTGAGTTAGGGTCTTACTGTGTAAGCCCAGACTGGTCTACAACTCAAGGTCCTTTAATTCAGCCCAGCTaGAGCACGTCCACAACACAG | + |
|
Preference number: 2 (lower is better) Translates to: FELGSYCVSPDWSTTQGPLIQPS*STSTTQ Trigger: CTGTGTTGTGGACGTGCTGCAGCTGGGCTGAATTAA...AGGACCTTGAGTTGTAGACCAGTCTGGGCTTACACAGTAAGACCCTAACTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCTTCTTCATCTGTTCTGGAAATGCAGATGGGCAGCAGCAGCCAACGGGAACACTGCTTTAAATACTaGATGCTACGCACTTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: SPSSSVLEMQMGSSSQREHCFKY*MLRTSC Trigger: ACATGAAGTGCGTAGCATGCAGTATTTAAAGCAGTG...TTCCCGTTGGCTGCTGCTGCCCATCTGCATTTCCAGAACAGATGAAGAAGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAGGAAGACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCATCTGTAGGTCAGAAGTaGTCTCCACTGCACAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: QKEDKERHHWAQTETYTPSVGQK*SPLHRM Trigger: CATCCTGTGCAGTGGAGACCACTTCTGACCTACAGA...TGGAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGTCTTCCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CAA 90 bp | AAGACAGGCTTTACCTGCTCTTGCTTTGAGCTCTCTTTCCCCAACTaGGAATTGAGACACTTTCCTAGAGAACATATCAAGAGCACACCC | + |
|
Preference number: 2 (lower is better) Translates to: KTGFTCSCFELSFPN*ELRHFPREHIKSTP Trigger: GGGTGTGCTCTTGATATGTTCTCTAGGAAAGTGTCTCAATTCCAAGTTGGGGAAAGAGAGCTCAAAGCAAGAGCAGGTAAAGCCTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR TCA 90 bp | TTTCAGAAGGGGCATACCTGCACTCTCCATAGCAGATCTAACAGGAAAACTGTCGCCTTCCCATCTCAGTaGCTACAGTTCATGATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: FQKGHTCTLHSRSNRKTVAFPSQ*LQFMIL Trigger: TAGAATCATGAACTGTAGTCACTGAGATGGGAAGGC...GACAGTTTTCCTGTTAGATCTGCTATGGAGAGTGCAGGTATGCCCCTTCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | ATCACTGGTAACCACATTTTTCAACTCCACCCACCATGGTACCCTAGAACCAAGGCCTTCCCATCTCAGTaGCTACAGTTCATGATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: ITGNHIFQLHPPWYPRTKAFPSQ*LQFMIL Trigger: TAGAATCATGAACTGTAGTCACTGAGATGGGAAGGC...CTTGGTTCTAGGGTACCATGGTGGGTGGAGTTGAAAAATGTGGTTACCAGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | CTAGGTTCAAAACTTCCATGTTCTCATCCTGACAGCACCACAAGTCCCAGTTCACAGAACAGAGACAAATaGTTTCCCACACACCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LGSKLPCSHPDSTTSPSSQNRDK*FPTHQQ Trigger: TTGCTGGTGTGTGGGAAATCATTTGTCTCTGTTCTG...TGAACTGGGACTTGTGGTGCTGTCAGGATGAGAACATGGAAGTTTTGAACCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCAGCAGCCTTGGATTAAAAGGTTGGCTTaGAGGAATGTGGAAGATGAC | + |
|
Preference number: 2 (lower is better) Translates to: TRKDITGHKQKPTLQQPWIKRLA*RNVEDD Trigger: GTCATCTTCCACATTCCTTCAAGCCAACCTTTTAAT...CCAAGGCTGCTGGAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR TCA 90 bp | GTCAAAAGGAAGACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCCAAGACTGGAATACTaGCTGGAGAGAGGTTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: VKRKTRKDITGHKQKPTLPRLEY*LERGSQ Trigger: TTGTGAACCTCTCTCCAGTCAGTATTCCAGTCTTGG...GAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGTCTTCCTTTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR GCA 90 bp | GTCAAAAGGAAGACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCGGTTCCCTTGATCACTaGCATGTTTGTCCTCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: VKRKTRKDITGHKQKPTLGSLDH*HVCPHS Trigger: ACTGTGAGGACAAACATGGCAGTGATCAAGGGAACC...GAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGTCTTCCTTTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | ATCACTGGTAACCACATTTTTCAACTCCACCCACCATGGTACCCTAGAACCAAGATGAGATCAGAGCCATaGACTAGACCATATCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: ITGNHIFQLHPPWYPRTKMRSEP*TRPYHR Trigger: CCTGTGATATGGTCTAGTCCATGGCTCTGATCTCAT...CTTGGTTCTAGGGTACCATGGTGGGTGGAGTTGAAAAATGTGGTTACCAGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAGAACAGCCAGGGATACACAGAGAAACTCTGTCTCCAAAGCTTAATGGTTGGGGTACTTACTGGCCGTaGCAATCACTATTATCACTT | + |
|
Preference number: 2 (lower is better) Translates to: PEQPGIHRETLSPKLNGWGTYWP*QSLLSL Trigger: AAGTGATAATAGTGATTGCCACGGCCAGTAAGTACC...CCAACCATTAAGCTTTGGAGACAGAGTTTCTCTGTGTATCCCTGGCTGTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR TCA 90 bp | CAAAAGGAAGACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCAGCCTTCCCATCTCAGTaGCTACAGTTCATGATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: QKEDKERHHWAQTETYTPAFPSQ*LQFMIL Trigger: TAGAATCATGAACTGTAGTCACTGAGATGGGAAGGC...TGGAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGTCTTCCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAACAGCCAGGGATACACAGAGAAACTCTGTCTCCAAAGCTTAATGGTTGGGTCAAGGTGTCTTCTTaGACTCTAATAGAAGTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PEQPGIHRETLSPKLNGWVKVSS*TLIEVS Trigger: AGACACTTCTATTAGAGTGCAAGAAGACACCTTGAC...CCAACCATTAAGCTTTGGAGACAGAGTTTCTCTGTGTATCCCTGGCTGTTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR CAA 90 bp | GAAGATGAAGAAATAGTGGATGAAGTCATAATCCAGTGGCTTGGTTaGGCCATTAAGACCAGAGGACATGGTTACTTGCTCTGGAGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: EDEEIVDEVIIQWLG*AIKTRGHGYLLWSK Trigger: TTTACTCCAGAGCAAGTAACCATGTCCTCTGGTCTTAATGGCCAAACCAAGCCACTGGATTATGACTTCATCCACTATTTCTTCATCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR TCA 90 bp | AGCTTTGAATTCAGGACAGAAGCATGTTATGTGGTCAAGGTCTCACTCTCAGGAATTAAAAGGTTGGCTTaGAGGAATGTGGAAGATGAC | + |
|
Preference number: 2 (lower is better) Translates to: SFEFRTEACYVVKVSLSGIKRLA*RNVEDD Trigger: GTCATCTTCCACATTCCTTCAAGCCAACCTTTTAAT...TCCTGAGAGTGAGACCTTGACCACATAACATGCTTCTGTCCTGAATTCAAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR CCA 72 bp | ACAGGTGGAAGCGAAGGCAAGCAGGGGGTGGGGCACTaGCAAGCACAGGGAGGAGGTTCTGGAGCCTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TGGSEGKQGVGH*QAQGGGSGAWA Trigger: TGCCCAGGCTCCAGAACCTCCTCCCTGTGCTTGCCAGTGCCCCACCCCCTGCTTGCCTTCGCTTCCACCTGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 72 bp | ACCCTTCTGAGCCAGGAGCACCAGGGTCCAGCCACCTaGTCCAGGAACCCAACACTCCAGCTGCCAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TLLSQEHQGPAT*SRNPTLQLPEA Trigger: TGCCTCTGGCAGCTGGAGTGTTGGGTTCCTGGAGCAGGTGGCTGGACCCTGGTGCTCCTGGCTCAGAAGGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 72 bp | GGGGGTGGGGCACTGGCAAGCACAGGGAGGAGGTTCTaGAGCCTGGGCACTCAGACTCTGCATAAGCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GGGALASTGRRF*SLGTQTLHKQL Trigger: CAACTGCTTATGCAGAGTCTGAGTGCCCAGGCTCCAGAACCTCCTCCCTGTGCTTGCCAGTGCCCCACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 72 bp | GGGCACTGGCAAGCACAGGGAGGAGGTTCTGGAGCCTaGGCACTCAGACTCTGCATAAGCAGTTGCATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GHWQAQGGGSGA*ALRLCISSCMP Trigger: TGGCATGCAACTGCTTATGCAGAGTCTGAGTGCCCAGGCTCCAGAACCTCCTCCCTGTGCTTGCCAGTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 72 bp | AACACTCCAGCTGCCAGAGGCATTGATAGTGACAGGTaGAAGCGAAGGCAAGCAGGGGGTGGGGCACTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: NTPAARGIDSDR*KRRQAGGGALA Trigger: TGCCAGTGCCCCACCCCCTGCTTGCCTTCGCTTCCACCTGTCACTATCAATGCCTCTGGCAGCTGGAGTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 72 bp | GACTACTACCATAGCTTCCCTAGAAGCCAACCCTTCTaGGCCAGGAGCACCAGGGTCCAGCCACCTGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: DYYHSFPRSQPF*ARSTRVQPPAP Trigger: TGGAGCAGGTGGCTGGACCCTGGTGCTCCTGGCTCAGAAGGGTTGGCTTCTAGGGAAGCTATGGTAGTAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 72 bp | CAGGGAGGAGGTTCTGGAGCCTGGGCACTCAGACTCTaGATAAGCAGTTGCATGCCACCCACAACTGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: QGGGSGAWALRL*ISSCMPPTTGL Trigger: GAGTCCAGTTGTGGGTGGCATGCAACTGCTTATGCAGAGTCTGAGTGCCCAGGCTCCAGAACCTCCTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 72 bp | ATGAAAGCTTCCCAACACGAACACCGTGCAAACGACTaGTGCTGGTGGTGCCTGGAAGACGGGGCCCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: MKASQHEHRAND*CWWCLEDGAQF Trigger: GAACTGGGCCCCGTCTTCCAGGCACCACCAGCATCAGTCGTTTGCACGGTGTTCGTGTTGGGAAGCTTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 72 bp | CACAGTGCTGCCTCTTCTTGTAACTTCCTGACAACCTaGTCTGGTCCTGAAGGCCCTGGTGAGCTGGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HSAASSCNFLTT*SGPEGPGELGP Trigger: TGGCCCCAGCTCACCAGGGCCTTCAGGACCAGATCAGGTTGTCAGGAAGTTACAAGAAGAGGCAGCACTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 72 bp | GGCATCAGTGTCTCCCAGGACCTGGATGGGTTCCCTTaGTCACTGCCATGTTTGTCCTCACAGTGCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GISVSQDLDGFP*SLPCLSSQCCL Trigger: GAGGCAGCACTGTGAGGACAAACATGGCAGTGATCAAGGGAACCCATCCAGGTCCTGGGAGACACTGATGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 72 bp | GGGTGCAGATCAGACGAGGAGGGACCTGCTCAGACCTaGGGGACTTCATGGTCAAGGTGTCTTCTTGCACTC | + |
|
Preference number: 3 (lower is better) Translates to: GCRSDEEGPAQT*GTSWSRCLLAL Trigger: GAGTGCAAGAAGACACCTTGACCATGAAGTCCCTCAGGTCTGAGCAGGTCCCTCCTCGTCTGATCTGCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 72 bp | CCATCAGACAGGGTGCAGATCAGACGAGGAGGGACCTaGTCAGACCTGAGGGACTTCATGGTCAAGGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PSDRVQIRRGGT*SDLRDFMVKVS Trigger: AGACACCTTGACCATGAAGTCCCTCAGGTCTGAGCAGGTCCCTCCTCGTCTGATCTGCACCCTGTCTGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR CCA 72 bp | CTAGAGAACATATCAAGAGCACACCCTATGGGGCACTaGCCCAGGCCCTTCCTTGGCAGCAGAGACCCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LENISRAHPMGH*PRPFLGSRDPN Trigger: GTTAGGGTCTCTGCTGCCAAGGAAGGGCCTGGGCCAGTGCCCCATAGGGTGTGCTCTTGATATGTTCTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCAGCTGCAGCACGTCCACAACACAGACATTGAACATAACCCATACATGCCCAGAGCAGGTCAGGTaGACGGCTGCCTTCCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: QPSCSTSTTQTLNITHTCPEQVR*TAAFPS Trigger: AGATGGGAAGGCAGCCGTCAACCTGACCTGCTCTGG...GCATGTATGGGTTATGTTCAATGTCTGTGTTGTGGACGTGCTGCAGCTGGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGCTTGCATGCACAGATTCCAGCACTCTCTGGGCAACACAGCACAGCACCAGCCCAGTTCCCTCCTTaGCAGGTGATATCAGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: MSLHAQIPALSGQHSTAPAQFPP*QVISEP Trigger: GGGCTCTGATATCACCTGCAAAGGAGGGAACTGGGC...TGGTGCTGTGCTGTGTTGCCCAGAGAGTGCTGGAATCTGTGCATGCAAGCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 72 bp | AAAGGAATCCTGTGGCCGGGAGCTGGCCTCCCAGGTTaGGTGACTACTACCATAGCTTCCCTAGAAGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: KGILWPGAGLPG*VTTTIASLEAN Trigger: GTTGGCTTCTAGGGAAGCTATGGTAGTAGTCACTCAACCTGGGAGGCCAGCTCCCGGCCACAGGATTCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 72 bp | CAGAGACCCTATGAAAGCTTCCCAACACGAACACCGTaGAAACGACTGATGCTGGTGGTGCCTGGAAGACGG | + |
|
Preference number: 3 (lower is better) Translates to: QRPYESFPTRTP*KRLMLVVPGRR Trigger: CCGTCTTCCAGGCACCACCAGCATCAGTCGTTTGCACGGTGTTCGTGTTGGGAAGCTTTCATAGGGTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 72 bp | GAGAGAGGTTCACAAAGGAATCCTGTGGCCGGGAGCTaGCCTCCCAGGTTGAGTGACTACTACCATAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ERGSQRNPVAGS*PPRLSDYYHSF Trigger: GAAGCTATGGTAGTAGTCACTCAACCTGGGAGGCCAGCTCCCGGCCACAGGATTCCTTTGTGAACCTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTCATCTGTTCTGGAAATGCAGATGGGCAGCAGCAGCCAACGGGAAGGTTGCCCTGTCTGCAGCCTaGAGGATGAGATCAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLHLFWKCRWAAAANGKVALSAA*RMRSEP Trigger: TGGCTCTGATCTCATCCTCAAGGCTGCAGACAGGGC...AACCTTCCCGTTGGCTGCTGCTGCCCATCTGCATTTCCAGAACAGATGAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCTTCTTCATCTGTTCTGGAAATGCAGATGGGCAGCAGCAGCCAACGGGAAGCCCTGTCTGCAGCCTaGAGGATGAGATCAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SPSSSVLEMQMGSSSQREALSAA*RMRSEP Trigger: TGGCTCTGATCTCATCCTCAAGGCTGCAGACAGGGC...TTCCCGTTGGCTGCTGCTGCCCATCTGCATTTCCAGAACAGATGAAGAAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 72 bp | AGGGAAAGGGCCACAGAGCTACATGCAGGAGGGGTGTaGTACCAGACTGCAACTGATCATCTACAAGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RERATELHAGGV*YQTATDHLQVW Trigger: CCAGACTTGTAGATGATCAGTTGCAGTCTGGTAGCACACCCCTCCTGCATGTAGCTCTGTGGCCCTTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 72 bp | TCAGAAGTGGTCTCCACTGCACAGGATGAGCTTGCATaGACAGATTCCAGCACTCTCTGGGCAACACAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SEVVSTAQDELA*TDSSTLWATQH Trigger: GTGCTGTGTTGCCCAGAGAGTGCTGGAATCTGTGCATGCAAGCTCATCCTGTGCAGTGGAGACCACTTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 72 bp | GCTCCCACCGTGTGCTACCCCAGATCTTGTTCACAGTaGACCAGAAATAGGGCCAGCCCAAATACTCACTAC | + |
|
Preference number: 3 (lower is better) Translates to: APTVCYPRSCSQ*TRNRASPNTHY Trigger: GTAGTGAGTATTTGGGCTGGCCCTATTTCTGGTGCACTGTGAACAAGATCTGGGGTAGCACACGGTGGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR CCA 72 bp | GCATGCTACGCACTTCATGTATCAAGGATTGACAGATaGGTGGACTTAGAGGAGGTGGGAGTGGCCCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: ACYALHVSRIDR*VDLEEVGVALT Trigger: GGTCAGGGCCACTCCCACCTCCTCTAAGTCCACCCATCTGTCAATCCTTGATACATGAAGTGCGTAGCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 72 bp | GCCCTGTCTGCAGCCTTGAGGATGAGATCAGAGCCATaGACTAGACCATATCACAGGACACAGAGGCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: ALSAALRMRSEP*TRPYHRTQRPT Trigger: TGTTGGCCTCTGTGTCCTGTGATATGGTCTAGTCCATGGCTCTGATCTCATCCTCAAGGCTGCAGACAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 72 bp | AGCCACCACATGAGCCTTCTCCTTCTTCATCTGTTCTaGAAATGCAGATGGGCAGCAGCAGCCAACGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SHHMSLLLLHLF*KCRWAAAANGK Trigger: CTTCCCGTTGGCTGCTGCTGCCCATCTGCATTTCCAGAACAGATGAAGAAGGAGAAGGCTCATGTGGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 72 bp | CAGGGTCTCTCCCGACTACTTTCTGTAGGTCAGAAGTaGTCTCCACTGCACAGGATGAGCTTGCATGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: QGLSRLLSVGQK*SPLHRMSLHAQ Trigger: CTGTGCATGCAAGCTCATCCTGTGCAGTGGAGACCACTTCTGACCTACAGAAAGTAGTCGGGAGAGACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 72 bp | GAGCAGGTCAGGTTGACGGCTGCCTTCCCATCTCAGTaGCTACAGTTCATGATTCTAAGGTTGCAGTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: EQVRLTAAFPSQ*LQFMILRLQWP Trigger: TGGCCACTGCAACCTTAGAATCATGAACTGTAGTCACTGAGATGGGAAGGCAGCCGTCAACCTGACCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 72 bp | CTCTGTACTACAGCACCCACACCCTCAGGGGCAGCTTaGATGATTATGTCACTCTCTCTGGAGTCTACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LCTTAPTPSGAA*MIMSLSLESTS Trigger: GCTGGTAGACTCCAGAGAGAGTGACATAATCATTCAAGCTGCCCCTGAGGGTGTGGGTGCTGTAGTACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 72 bp | AGGACACAGAGGCCAACAAGGAGATGTAGCTCCAGGTaGTTACCTGACTCCTGTAAGCACAAGGAGACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RTQRPTRRCSSR*LPDSCKHKETA Trigger: AGCTGTCTCCTTGTGCTTACAGGAGTCAGGTAAGCACCTGGAGCTACATCTCCTTGTTGGCCTCTGTGTCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 72 bp | GGCAGCAGCAGCCAACGGGAAGGTTCTGGAGGAACCTaGCTCATTGAAGTCTGGTACAACTATCTAGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: GSSSQREGSGGT*LIEVWYNYLAN Trigger: GTTAGCTAGATAGTTGTACCAGACTTCAATGAGCCAGGTTCCTCCAGAACCTTCCCGTTGGCTGCTGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 72 bp | CACTCTAATAGAAGTGTCTGGAGCTCAGCCTCAGGCTaGTATTGCTGTAAACAGGGACCCCGGTCCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HSNRSVWSSASG*YCCKQGPRSSL Trigger: AAGACTGGACCGGGGTCCCTGTTTACAGCAATACCAGCCTGAGGCTGAGCTCCAGACACTTCTATTAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAGAAGGGGCATACCTGCACTCTCCATAGCAGATCTAACAGGAAAACTGTCGCCCAGTTCCCTCCTTaGCAGGTGATATCAGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: FQKGHTCTLHSRSNRKTVAQFPP*QVISEP Trigger: GGGCTCTGATATCACCTGCAAAGGAGGGAACTGGGC...GACAGTTTTCCTGTTAGATCTGCTATGGAGAGTGCAGGTATGCCCCTTCTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 72 bp | ACCCACCATGGTACCCTAGAACCAAGACTGGAATACTaGCTGGAGAGAGGTTCACAAAGGAATCCTGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: THHGTLEPRLEY*LERGSQRNPVA Trigger: GGCCACAGGATTCCTTTGTGAACCTCTCTCCAGTCAGTATTCCAGTCTTGGTTCTAGGGTACCATGGTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 72 bp | ACCATGTGGAACCACCACAGCTTTCAGCTTGGCTCTTaGAGGAACATCAGTCAGCCTGAACTGACAGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: TMWNHHSFQLGS*RNISQPELTAT Trigger: AGTTGCTGTCAGTTCAGGCTGACTGATGTTCCTCCAAGAGCCAAGCTGAAAGCTGTGGTGGTTCCACATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR CCA 72 bp | AGCATTCAAGAGGTAGAGGCAGGCAGATCTCTGAGTTaGAGGTCAGCGTGGTGTACAGAGCAAGTTCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SIQEVEAGRSLS*RSAWCTEQVPE Trigger: TTCTGGAACTTGCTCTGTACACCACGCTGACCTCCAACTCAGAGATCTGCCTGCCTCTACCTCTTGAATGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR CAA 90 bp | CATAGTAAAACCCTGCAAGGGAGTCTGCACAGGGACAGGTCAGGGTACTTACTGGGCAGGTGCTGCCATTaGTGGTTCTTAAAAGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: HSKTLQGSLHRDRSGYLLGRCCH*WFLKVQ Trigger: TTGGACTTTTAAGAACCACAAATGGCAGCACCTGCC...CAGTAAGTACCCTGACCTGTCCCTGTGCAGACTCCCTTGCAGGGTTTTACTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAAAGGAAGACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCGGGTCAACTGGGAACTaGGCATCAGTGTCTCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VKRKTRKDITGHKQKPTLGSTGN*ASVSPR Trigger: CCTGGGAGACACTGATGCCAAGTTCCCAGTTGACCC...GAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGTCTTCCTTTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 72 bp | CACAGAGTGTGCTCCCACTTTCAGAAGGGGCATACCTaGACTCTCCATAGCAGATCTAACAGGAAAACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: HRVCSHFQKGHT*TLHSRSNRKTV Trigger: GACAGTTTTCCTGTTAGATCTGCTATGGAGAGTGCAGGTATGCCCCTTCTGAAAGTGGGAGCACACTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 72 bp | TCAGACCTGAGGGACTTCATGGTCAAGGTGTCTTCTTaGACTCTAATAGAAGTGTCTGGAGCTCAGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SDLRDFMVKVSS*TLIEVSGAQPQ Trigger: CTGAGGCTGAGCTCCAGACACTTCTATTAGAGTGCAAGAAGACACCTTGACCATGAAGTCCCTCAGGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTCAGGGGCAGCTTGAATGATTATGTCACTCTCTCTGGAGTCTACCAGCTGTTCATGATTCTAAGGTaGCAGTGGCCAGATGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: TLRGSLNDYVTLSGVYQLFMILR*QWPDAD Trigger: ATCAGCATCTGGCCACTGCAACCTTAGAATCATGAA...CAGCTGGTAGACTCCAGAGAGAGTGACATAATCATTCAAGCTGCCCCTGAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCAGCTGCAGCACGTCCACAACACAGACATTGAACATAACCCATACATGCTTCATGATTCTAAGGTaGCAGTGGCCAGATGCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: QPSCSTSTTQTLNITHTCFMILR*QWPDAD Trigger: ATCAGCATCTGGCCACTGCAACCTTAGAATCATGAA...GCATGTATGGGTTATGTTCAATGTCTGTGTTGTGGACGTGCTGCAGCTGGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTCATCTGTTCTGGAAATGCAGATGGGCAGCAGCAGCCAACGGGAAGGTTCTGTCCACAACACAGACATaGAACATAACCCATACATGC | + |
|
Preference number: 3 (lower is better) Translates to: LHLFWKCRWAAAANGKVLSTTQT*NITHTC Trigger: GCATGTATGGGTTATGTTCAATGTCTGTGTTGTGGA...CAGAACCTTCCCGTTGGCTGCTGCTGCCCATCTGCATTTCCAGAACAGATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR GCA 72 bp | ATCCTAGGCCACTTGCTTTTACTCTGCCGTCAGGTGTaGATGCATGAGTGTGTACAAAGAAACTCACACCTC | + |
|
Preference number: 3 (lower is better) Translates to: ILGHLLLLCRQV*MHECVQRNSHL Trigger: GAGGTGTGAGTTTCTTTGTACACACTCATGCATGCACACCTGACGGCAGAGTAAAAGCAAGTGGCCTAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR CCA 72 bp | GGTCAAGGTGTCTTCTTGCACTCTAATAGAAGTGTCTaGAGCTCAGCCTCAGGCTGGTATTGCTGTAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: GQGVFLHSNRSV*SSASGWYCCKQ Trigger: CTGTTTACAGCAATACCAGCCTGAGGCTGAGCTCCAGACACTTCTATTAGAGTGCAAGAAGACACCTTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGGCATACCTGCACTCTCCATAGCAGATCTAACAGGAAAACTGTCACGAGGTCCACAACACAGACATaGAACATAACCCATACATGC | + |
|
Preference number: 3 (lower is better) Translates to: KGHTCTLHSRSNRKTVTRSTTQT*NITHTC Trigger: GCATGTATGGGTTATGTTCAATGTCTGTGTTGTGGA...CCTCGTGACAGTTTTCCTGTTAGATCTGCTATGGAGAGTGCAGGTATGCCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR TCA 72 bp | GGTGCTTTCCATCATTCTAGTCATGAGATTCAGAAATaGGGTATCAGAACTGAGAGGGAGGGGTGCTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: GAFHHSSHEIQK*GIRTEREGCSQ Trigger: CTGTGAGCACCCCTCCCTCTCAGTTCTGATACCTCATTTCTGAATCTCATGACTAGAATGATGGAAAGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 72 bp | TCTGTAGCAGTGGGTAAACCTAAGACAGGCTTTACCTaGTCTTGCTTTGAGCTCTCTTTCCCCAACTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SVAVGKPKTGFT*SCFELSFPNLE Trigger: TTCCAAGTTGGGGAAAGAGAGCTCAAAGCAAGAGCAGGTAAAGCCTGTCTTAGGTTTACCCACTGCTACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 72 bp | CTTGAGCTGATTATCCTAGGCCACTTGCTTTTACTCTaGCGTCAGGTGTGCATGCATGAGTGTGTACAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LELIILGHLLLL*RQVCMHECVQR Trigger: TCTTTGTACACACTCATGCATGCACACCTGACGGCAGAGTAAAAGCAAGTGGCCTAGGATAATCAGCTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR TCA 72 bp | GTAGTGGGGGAAACACAGACACCAAACAAAAGGACATaGGAACTTGAGCTGATTATCCTAGGCCACTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VVGETQTPNKRT*ELELIILGHLL Trigger: AAGCAAGTGGCCTAGGATAATCAGCTCAAGTTCTCATGTCCTTTTGTTTGGTGTCTGTGTTTCCCCCACTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR CCA 72 bp | ATCACTGGTAACCACATTTTTCAACTCCACCCACCATaGTACCCTAGAACCAAGACTGGAATACTGACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ITGNHIFQLHPP*YPRTKTGILTG Trigger: TCCAGTCAGTATTCCAGTCTTGGTTCTAGGGTACCATGGTGGGTGGAGTTGAAAAATGTGGTTACCAGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 72 bp | CTTTATTTTAGGTCAACATTTAGACAGCTCACCATGTaGAACCACCACAGCTTTCAGCTTGGCTCTTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LYFRSTFRQLTM*NHHSFQLGSWR Trigger: CCTCCAAGAGCCAAGCTGAAAGCTGTGGTGGTTCCACATGGTGAGCTGTCTAAATGTTGACCTAAAATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 72 bp | ATGTACACAATAAACTTAGGGTTTCCTTTTGTGTTCTaGAAGGAGACCCTACCCCTGCCCAACACTTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: MYTINLGFPFVF*KETLPLPNTSR Trigger: TCTTGAAGTGTTGGGCAGGGGTAGGGTCTCCTTGCAGAACACAAAAGGAAACCCTAAGTTTATTGTGTACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 72 bp | TTGGCAGCAGAGACCCTAACTAGCCTGTCCTTTACATaGACCCAGATTACTGACTTTTACCTGGTACTTATA | + |
|
Preference number: 3 (lower is better) Translates to: LAAETLTSLSFT*TQITDFYLVLI Trigger: TATAAGTACCAGGTAAAAGTCAGTAATCTGGGTGCATGTAAAGGACAGGCTAGTTAGGGTCTCTGCTGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR TCA 72 bp | GGAAACACAGACACCAAACAAAAGGACATGAGAACTTaGGCTGATTATCCTAGGCCACTTGCTTTTACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GNTDTKQKDMRT*ADYPRPLAFTL Trigger: CAGAGTAAAAGCAAGTGGCCTAGGATAATCAGCTCAAGTTCTCATGTCCTTTTGTTTGGTGTCTGTGTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR GCA 72 bp | GAAGAAGACCGTAGCTACACTGCTTTAAATACTGCATaGTACGCACTTCATGTATCAAGGATTGACAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: EEDRSYTALNTA*YALHVSRIDRW Trigger: CCATCTGTCAATCCTTGATACATGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTCTTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CCA 72 bp | GAAGATGAAGAAATAGTGGATGAAGTCATAATCCAGTaGCTTGGTTTGGCCATTAAGACCAGAGGACATGGT | + |
|
Preference number: 3 (lower is better) Translates to: EDEEIVDEVIIQ*LGLAIKTRGHG Trigger: ACCATGTCCTCTGGTCTTAATGGCCAAACCAAGCCACTGGATTATGACTTCATCCACTATTTCTTCATCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| 3UTR-3UTR CAA 90 bp | CAAAATACTGGAAAAAGAATAAGATCAGTCACGGTTTACACTGTTCACAACTGTGGCAGGTGCTGCCATTaGTGGTTCTTAAAAGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: QNTGKRIRSVTVYTVHNCGRCCH*WFLKVQ Trigger: TTGGACTTTTAAGAACCACAAATGGCAGCACCTGCC...ACAGTTGTGAACAGTGTAAACCGTGACTGATCTTATTCTTTTTCCAGTATTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| CDS-3UTR CCA 90 bp | GGTGGGAGTGGCCCTGACCAGCCAGAGCAGGTCAGGTTGACGGCTGCCTTCCCACACCCTCAGGTGCCTTaGGCTTGCATTTCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGSGPDQPEQVRLTAAFPHPQVP*ACISHS Trigger: GCTGTGGGAAATGCAAGCCCAAGGCACCTGAGGGTG...TGGGAAGGCAGCCGTCAACCTGACCTGCTCTGGCTGGTCAGGGCCACTCCCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGGGAGTGGCCCTGACCAGCCAGAGCAGGTCAGGTTGACGGCTGCCTTCCAGCTGTCAGCTGGGTaGTCTCTGTGGCAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGGSGPDQPEQVRLTAAFQLSAG*SLWQML Trigger: CAGCATCTGCCACAGAGACCACCCAGCTGACAGCTG...GAAGGCAGCCGTCAACCTGACCTGCTCTGGCTGGTCAGGGCCACTCCCACCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGGGAGTGGCCCTGACCAGCCAGAGCAGGTCAGGTTGACGGCTGCCTTCCGTCGGTGTGATAGCTaGGGTGGGAGTCAGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGGSGPDQPEQVRLTAAFRRCDS*GGSQLS Trigger: TGACAGCTGACTCCCACCCCAGCTATCACACCGACG...GAAGGCAGCCGTCAACCTGACCTGCTCTGGCTGGTCAGGGCCACTCCCACCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGGAGTGGCCCTGACCAGCCAGAGCAGGTCAGGTTGACGGCTGCCTTCCCAATCAGACTGCAGCTGTaGCTCCAAGTCTTCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGSGPDQPEQVRLTAAFPIRLQL*LQVFRG Trigger: TCCCCTGAAGACTTGGAGGCACAGCTGCAGTCTGAT...TGGGAAGGCAGCCGTCAACCTGACCTGCTCTGGCTGGTCAGGGCCACTCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGCCCTGACCAGCCAGAGCAGGTCAGGTTGACGGCTGCCTTCCCATCTCAGCAGGTGCCTTGGGCTTaGATTTCCCACAGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGPDQPEQVRLTAAFPSQQVPWA*ISHSSS Trigger: ACTGCTGCTGTGGGAAATGCAAGCCCAAGGCACCTG...CTGAGATGGGAAGGCAGCCGTCAACCTGACCTGCTCTGGCTGGTCAGGGCCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGGGAGTGGCCCTGACCAGCCAGAGCAGGTCAGGTTGACGGCTGCCTTCTCCCTTTCATCAGACTaGAGCTGTGCCTCCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGGSGPDQPEQVRLTAAFSLSSD*SCASKS Trigger: AGACTTGGAGGCACAGCTGCAGTCTGATGAAAGGGA...GAAGGCAGCCGTCAACCTGACCTGCTCTGGCTGGTCAGGGCCACTCCCACCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTGCCTGGAAGACGGGGCCCAGTTCCCTCCTTTGCAGGTGATATCAGAGCCCACCCTCAGGTGCCTTaGGCTTGCATTTCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VVPGRRGPVPSFAGDIRAHPQVP*ACISHS Trigger: GCTGTGGGAAATGCAAGCCCAAGGCACCTGAGGGTG...GGCTCTGATATCACCTGCAAAGGAGGGAACTGGGCCCCGTCTTCCAGGCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR CCA 90 bp | GTGGTGCCTGGAAGACGGGGCCCAGTTCCCTCCTTTGCAGGTGATATCAGAGCCCAGCTGTCAGCTGGGTaGTCTCTGTGGCAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVPGRRGPVPSFAGDIRAQLSAG*SLWQML Trigger: CAGCATCTGCCACAGAGACCACCCAGCTGACAGCTG...GGCTCTGATATCACCTGCAAAGGAGGGAACTGGGCCCCGTCTTCCAGGCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCCAGAGCAGGTCAGGTTGACGGCTGCCTTCCCATCTCAGTGACTACAGTTCTCCTCACCCTCAGGTaGCTTGGGCTTGCATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PARAGQVDGCLPISVTTVLLTLR*LGLAFP Trigger: GGGAAATGCAAGCCCAAGGCACCTGAGGGTGAGGAG...AACTGTAGTCACTGAGATGGGAAGGCAGCCGTCAACCTGACCTGCTCTGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTCAACTGGGAACTTGGCATCAGTGTCTCCCAGGACCTGGATGGGTTCCCTCTCCTCACCCTCAGGTaGCTTGGGCTTGCATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVNWELGISVSQDLDGFPLLTLR*LGLAFP Trigger: GGGAAATGCAAGCCCAAGGCACCTGAGGGTGAGGAG...AGGGAACCCATCCAGGTCCTGGGAGACACTGATGCCAAGTTCCCAGTTGACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | GGAAATGCAGATGGGCAGCAGCAGCCAACGGGAAGGTTCTGGAGGAACCTGGCTATCAGACTGCAGCTGTaGCTCCAAGTCTTCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNADGQQQPTGRFWRNLAIRLQL*LQVFRG Trigger: TCCCCTGAAGACTTGGAGGCACAGCTGCAGTCTGAT...AGCCAGGTTCCTCCAGAACCTTCCCGTTGGCTGCTGCTGCCCATCTGCATTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTCAACTGGGAACTTGGCATCAGTGTCTCCCAGGACCTGGATGGGTTCCCTCAACAAACAGCGCCTTaGCCCACCAGCTGGAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RVNWELGISVSQDLDGFPQQTAP*PTSWRV Trigger: TACTCTCCAGCTGGTGGGCCAAGGCGCTGTTTGTTG...AGGGAACCCATCCAGGTCCTGGGAGACACTGATGCCAAGTTCCCAGTTGACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CAA 72 bp | CAAAGGAATCCTGTGGCCGGGAGCTGGCCTCCCAGGTaGAGTGACTACTACCATAGCTTCCCTAGAAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QRNPVAGSWPPR*SDYYHSFPRSQ Trigger: TTGGCTTCTAGGGAAGCTATGGTAGTAGTCACTCAACCTGGGAGGCCAGCTCCCGGCCACAGGATTCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CAA 72 bp | TGGCATCAGTGTCTCCCAGGACCTGGATGGGTTCCCTaGATCACTGCCATGTTTGTCCTCACAGTGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WHQCLPGPGWVP*ITAMFVLTVLP Trigger: AGGCAGCACTGTGAGGACAAACATGGCAGTGATCAAGGGAACCCATCCAGGTCCTGGGAGACACTGATGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCCAGAGCAGGTCAGGTTGACGGCTGCCTTCCCATCTCAGTGACTACAGTTTCCCTTTCATCAGACTaGAGCTGTGCCTCCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PARAGQVDGCLPISVTTVSLSSD*SCASKS Trigger: AGACTTGGAGGCACAGCTGCAGTCTGATGAAAGGGA...AACTGTAGTCACTGAGATGGGAAGGCAGCCGTCAACCTGACCTGCTCTGGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGTCAGGTTGACGGCTGCCTTCCCATCTCAGTGACTACAGTTCATGATTCTCGTCGGTGTGATAGCTaGGGTGGGAGTCAGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGQVDGCLPISVTTVHDSRRCDS*GGSQLS Trigger: TGACAGCTGACTCCCACCCCAGCTATCACACCGACG...AGAATCATGAACTGTAGTCACTGAGATGGGAAGGCAGCCGTCAACCTGACCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 |
||
| 3UTR CAA 72 bp | GGCTCATGTAGTTCTGTTGTAGGGTCAACTGGGAACTaGGCATCAGTGTCTCCCAGGACCTGGATGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSCSSVVGSTGN*ASVSPRTWMGS Trigger: GGAACCCATCCAGGTCCTGGGAGACACTGATGCCAAGTTCCCAGTTGACCCTACAACAGAACTACATGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CAA 72 bp | GTAGGTCAGAAGTGGTCTCCACTGCACAGGATGAGCTaGCATGCACAGATTCCAGCACTCTCTGGGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: VGQKWSPLHRMS*HAQIPALSGQH Trigger: GTGTTGCCCAGAGAGTGCTGGAATCTGTGCATGCAAGCTCATCCTGTGCAGTGGAGACCACTTCTGACCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | ACCCTCAGGGGCAGCTTGAATGATTATGTCACTCTCTCTGGAGTCTACCAGCTGGGTCTCTGTGGCAGATaGTGGCTGTATGACGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLRGSLNDYVTLSGVYQLGLCGR*WLYDDR Trigger: CCGATCGTCATACAGCCAGCATCTGCCACAGAGACC...CAGCTGGTAGACTCCAGAGAGAGTGACATAATCATTCAAGCTGCCCCTGAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| CDS-3UTR GCA 90 bp | CTTCATGTATCAAGGATTGACAGATGGGTGGACTTAGAGGAGGTGGGAGTGGCCGGTCTCTGTGGCAGATaGTGGCTGTATGACGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: LHVSRIDRWVDLEEVGVAGLCGR*WLYDDR Trigger: CCGATCGTCATACAGCCAGCATCTGCCACAGAGACC...GGCCACTCCCACCTCCTCTAAGTCCACCCATCTGTCAATCCTTGATACATGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 |
||
| CDS-3UTR CCA 90 bp | CATAGTAAAACCCTGCAAGGGAGTCTGCACAGGGACAGGTCAGGGTACTTACTGCAACAAACAGCGCCTTaGCCCACCAGCTGGAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HSKTLQGSLHRDRSGYLLQQTAP*PTSWRV Trigger: TACTCTCCAGCTGGTGGGCCAAGGCGCTGTTTGTTG...CAGTAAGTACCCTGACCTGTCCCTGTGCAGACTCCCTTGCAGGGTTTTACTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR TCA 90 bp | GGCTGCCTTCCCATCTCAGTGACTACAGTTCATGATTCTAAGGTTGCAGTGGCCAGCAGTAGCAGCAGGTaGGGAGGCCACAAACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: GCLPISVTTVHDSKVAVASSSSR*GGHKQQ Trigger: TTGTTGTTTGTGGCCTCCTCACCTGCTGCTACTGCT...GGCCACTGCAACCTTAGAATCATGAACTGTAGTCACTGAGATGGGAAGGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR TCA 90 bp | TATCACAGGACACAGAGGCCAACAAGGAGATGTAGCTCCAGGTGCTTACCTGACAGCAGTAGCAGCAGGTaGGGAGGCCACAAACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: YHRTQRPTRRCSSRCLPDSSSSR*GGHKQQ Trigger: TTGTTGTTTGTGGCCTCCTCACCTGCTGCTACTGCT...GTCAGGTAAGCACCTGGAGCTACATCTCCTTGTTGGCCTCTGTGTCCTGTGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCCAGCTGCAGCACGTCCACAACACAGACATTGAACATAACCCATACATGCCCCCTTTCATCAGACTaGAGCTGTGCCTCCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPSCSTSTTQTLNITHTCPLSSD*SCASKS Trigger: AGACTTGGAGGCACAGCTGCAGTCTGATGAAAGGGG...GCATGTATGGGTTATGTTCAATGTCTGTGTTGTGGACGTGCTGCAGCTGGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116365.9 |
||
| CDS-3UTR TCA 90 bp | CATACCTGCACTCTCCATAGCAGATCTAACAGGAAAACTGTCACGAGGCCGAGTAGCAGTAGCAGCAGGTaGGGAGGCCACAAACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: HTCTLHSRSNRKTVTRPSSSSSR*GGHKQQ Trigger: TTGTTGTTTGTGGCCTCCTCACCTGCTGCTACTGCT...ACTCGGCCTCGTGACAGTTTTCCTGTTAGATCTGCTATGGAGAGTGCAGGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGGCATACCTGCACTCTCCATAGCAGATCTAACAGGAAAACTGTCACGAGGATCAGACTGCAGCTGTaGCTCCAAGTCTTCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGHTCTLHSRSNRKTVTRIRLQL*LQVFRG Trigger: TCCCCTGAAGACTTGGAGGCACAGCTGCAGTCTGAT...CCTCGTGACAGTTTTCCTGTTAGATCTGCTATGGAGAGTGCAGGTATGCCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAGAAGGGGCATACCTGCACTCTCCATAGCAGATCTAACAGGAAAACTGTCCAGCTGTCAGCTGGGTaGTCTCTGTGGCAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQKGHTCTLHSRSNRKTVQLSAG*SLWQML Trigger: CAGCATCTGCCACAGAGACCACCCAGCTGACAGCTG...GACAGTTTTCCTGTTAGATCTGCTATGGAGAGTGCAGGTATGCCCCTTCTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 |
||
| CDS-3UTR TCA 90 bp | AGACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCAGCAGCCTTAGCAGTAGCAGCAGGTaGGGAGGCCACAAACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: RQGKTSLGTNRNLHSSSLSSSSR*GGHKQQ Trigger: TTGTTGTTTGTGGCCTCCTCACCTGCTGCTACTGCT...AAGGCTGCTGGAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | ACAAGTCCCAGTTCAGGATCTAGCTCGTTAGGATGTGAGGGAAAGGGCCACAGACTCCTTAAACTTGTCTaGAGCCTCTGGGTTATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSPSSGSSSLGCEGKGHRLLKLV*SLWVIR Trigger: CCTGATAACCCAGAGGCTGCAGACAAGTTTAAGGAG...TCTGTGGCCCTTTCCCTCACATCCTAACGAGCTAGATCCTGAACTGGGACTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | GTCAAAAGGAAGACAAGGAAAGACATCACTGGGCACAAACAGAAACCTACACTCCTCCTCACCCTCAGGTaGCTTGGGCTTGCATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VKRKTRKDITGHKQKPTLLLTLR*LGLAFP Trigger: GGGAAATGCAAGCCCAAGGCACCTGAGGGTGAGGAG...GAGTGTAGGTTTCTGTTTGTGCCCAGTGATGTCTTTCCTTGTCTTCCTTTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAGAAGGGGCATACCTGCACTCTCCATAGCAGATCTAACAGGAAAACTGTCGGTCTCTGTGGCAGATaGTGGCTGTATGACGATCGG | + |
|
Preference number: 4 (lower is better) Translates to: FQKGHTCTLHSRSNRKTVGLCGR*WLYDDR Trigger: CCGATCGTCATACAGCCAGCATCTGCCACAGAGACC...GACAGTTTTCCTGTTAGATCTGCTATGGAGAGTGCAGGTATGCCCCTTCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 |
||
| CDS-3UTR CCA 90 bp | ATGATTCTAAGGTTGCAGTGGCCAGATGCTGATTCATCCTCTAATCACAGCCTCCAACAAACAGCGCCTTaGCCCACCAGCTGGAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MILRLQWPDADSSSNHSLQQTAP*PTSWRV Trigger: TACTCTCCAGCTGGTGGGCCAAGGCGCTGTTTGTTG...GAGGCTGTGATTAGAGGATGAATCAGCATCTGGCCACTGCAACCTTAGAATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | GCTTTAAATACTGCATGCTACGCACTTCATGTATCAAGGATTGACAGATGGGTGCTCCTCACCCTCAGGTaGCTTGGGCTTGCATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALNTACYALHVSRIDRWVLLTLR*LGLAFP Trigger: GGGAAATGCAAGCCCAAGGCACCTGAGGGTGAGGAG...CACCCATCTGTCAATCCTTGATACATGAAGTGCGTAGCATGCAGTATTTAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR CCA 90 bp | ATGATTCTAAGGTTGCAGTGGCCAGATGCTGATTCATCCTCTAATCACAGCCTCCTCTGTGGCAGATGCTaGCTGTATGACGATCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MILRLQWPDADSSSNHSLLCGRC*LYDDRC Trigger: ACACCGATCGTCATACAGCCAGCATCTGCCACAGAG...GAGGCTGTGATTAGAGGATGAATCAGCATCTGGCCACTGCAACCTTAGAATCAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGAAGGGGCATACCTGCACTCTCCATAGCAGATCTAACAGGAAAACTGTCCTCTGTGGCAGATGCTaGCTGTATGACGATCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FQKGHTCTLHSRSNRKTVLCGRC*LYDDRC Trigger: ACACCGATCGTCATACAGCCAGCATCTGCCACAGAG...GACAGTTTTCCTGTTAGATCTGCTATGGAGAGTGCAGGTATGCCCCTTCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 |
||
| CDS-3UTR GCA 90 bp | GCATGCTACGCACTTCATGTATCAAGGATTGACAGATGGGTGGACTTAGAGGAGCTCCTTAAACTTGTCTaGAGCCTCTGGGTTATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ACYALHVSRIDRWVDLEELLKLV*SLWVIR Trigger: CCTGATAACCCAGAGGCTGCAGACAAGTTTAAGGAG...CTCCTCTAAGTCCACCCATCTGTCAATCCTTGATACATGAAGTGCGTAGCATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | GCTTTAAATACTGCATGCTACGCACTTCATGTATCAAGGATTGACAGATGGGTGCAGGTGCCTTGGGCTTaGATTTCCCACAGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALNTACYALHVSRIDRWVQVPWA*ISHSSS Trigger: ACTGCTGCTGTGGGAAATGCAAGCCCAAGGCACCTG...CACCCATCTGTCAATCCTTGATACATGAAGTGCGTAGCATGCAGTATTTAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | GACCGTAGCTACACTGCTTTAAATACTGCATGCTACGCACTTCATGTATCAAGGATCAGACTGCAGCTGTaGCTCCAAGTCTTCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DRSYTALNTACYALHVSRIRLQL*LQVFRG Trigger: TCCCCTGAAGACTTGGAGGCACAGCTGCAGTCTGAT...CCTTGATACATGAAGTGCGTAGCATGCAGTATTTAAAGCAGTGTAGCTACGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR GCA 90 bp | GCTTTAAATACTGCATGCTACGCACTTCATGTATCAAGGATTGACAGATGGGTGTCCCTTTCATCAGACTaGAGCTGTGCCTCCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALNTACYALHVSRIDRWVSLSSD*SCASKS Trigger: AGACTTGGAGGCACAGCTGCAGTCTGATGAAAGGGA...CACCCATCTGTCAATCCTTGATACATGAAGTGCGTAGCATGCAGTATTTAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 |
||
| 3UTR CAA 72 bp | CTTGGTTTGGCCATTAAGACCAGAGGACATGGTTACTaGCTCTGGAGTAAAAAGCTAGAGCTGTTAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLAIKTRGHGY*LWSKKLELLGK Trigger: CTTGCCTAACAGCTCTAGCTTTTTACTCCAGAGCAAGTAACCATGTCCTCTGGTCTTAATGGCCAAACCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| CDS-3UTR GCA 90 bp | CTACAGTTCATGATTCTAAGGTTGCAGTGGCCAGATGCTGATTCATCCTCTAATCTCCTTAAACTTGTCTaGAGCCTCTGGGTTATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQFMILRLQWPDADSSSNLLKLV*SLWVIR Trigger: CCTGATAACCCAGAGGCTGCAGACAAGTTTAAGGAG...ATTAGAGGATGAATCAGCATCTGGCCACTGCAACCTTAGAATCATGAACTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| 3UTR CAA 72 bp | TGGCTTTATGATTCAGGAACAAATCCAGCAAGTAACTaGGGAAAAAGTTGCCTAACCACAGTAAGCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WLYDSGTNPASN*GKSCLTTVSTG Trigger: GCCAGTGCTTACTGTGGTTAGGCAACTTTTTCCCAAGTTACTTGCTGGATTTGTTCCTGAATCATAAAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072334.12 |
||
| CDS-3UTR CAA 90 bp | GTGGTGCCTGGAAGACGGGGCCCAGTTCCCTCCTTTGCAGGTGATATCAGAGCCTCAGGTGCCTTGGGCTaGCATTTCCCACAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VVPGRRGPVPSFAGDIRASGALG*HFPQQQ Trigger: CTGCTGCTGTGGGAAATGCAAGCCCAAGGCACCTGA...GGCTCTGATATCACCTGCAAAGGAGGGAACTGGGCCCCGTCTTCCAGGCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR CAA 90 bp | GGTTCACAAAGGAATCCTGTGGCCGGGAGCTGGCCTCCCAGGTTGAGTGACTACTCAGGTGCCTTGGGCTaGCATTTCCCACAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSQRNPVAGSWPPRLSDYSGALG*HFPQQQ Trigger: CTGCTGCTGTGGGAAATGCAAGCCCAAGGCACCTGA...GTAGTCACTCAACCTGGGAGGCCAGCTCCCGGCCACAGGATTCCTTTGTGAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTCAACTGGGAACTTGGCATCAGTGTCTCCCAGGACCTGGATGGGTTCCCTTCAGGTGCCTTGGGCTaGCATTTCCCACAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVNWELGISVSQDLDGFPSGALG*HFPQQQ Trigger: CTGCTGCTGTGGGAAATGCAAGCCCAAGGCACCTGA...AGGGAACCCATCCAGGTCCTGGGAGACACTGATGCCAAGTTCCCAGTTGACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072334.12 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||
| CDS-3UTR CAA 90 bp | CAGGTTGACGGCTGCCTTCCCATCTCAGTGACTACAGTTCATGATTCTAAGGTTTCAGGTGCCTTGGGCTaGCATTTCCCACAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QVDGCLPISVTTVHDSKVSGALG*HFPQQQ Trigger: CTGCTGCTGTGGGAAATGCAAGCCCAAGGCACCTGA...AACCTTAGAATCATGAACTGTAGTCACTGAGATGGGAAGGCAGCCGTCAACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072334.12 ENSMUST00000108796.2 ENSMUST00000108797.8 ENSMUST00000116365.9 |
||